Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001806-TA|BGIBMGA001806-PA|IPR000086|NUDIX hydrolase
(227 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g25550.1 68417.m03683 expressed protein 253 8e-68
At4g29820.1 68417.m04245 expressed protein 184 4e-47
At5g63600.1 68418.m07985 flavonol synthase, putative similar to ... 37 0.010
At5g03540.1 68418.m00310 exocyst subunit EXO70 family protein co... 29 2.6
At5g63590.1 68418.m07983 flavonol synthase, putative similar to ... 29 3.4
At1g71290.1 68414.m08227 F-box family protein-related contains w... 28 6.0
At4g12720.3 68417.m01998 MutT/nudix family protein similar to SP... 27 7.9
At4g12720.2 68417.m01997 MutT/nudix family protein similar to SP... 27 7.9
At4g12720.1 68417.m01996 MutT/nudix family protein similar to SP... 27 7.9
At4g11330.1 68417.m01829 mitogen-activated protein kinase, putat... 27 7.9
>At4g25550.1 68417.m03683 expressed protein
Length = 200
Score = 253 bits (619), Expect = 8e-68
Identities = 113/195 (57%), Positives = 140/195 (71%), Gaps = 1/195 (0%)
Query: 31 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 90
+ +++ +N YPL+NY+FGTKEP EKD SV R RM+ + K GMR SVEG+LLV EH
Sbjct: 1 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHN 60
Query: 91 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDG-VKQEWLIEDTIGNWW 149
PH+LLLQ+G F KLPGG L PGE+E DGLKR LT LG + +W + + + WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEADGLKRKLTSKLGGNSAALVPDWTVGECVATWW 120
Query: 150 RPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYG 209
RPNFE YPY PPHITKPKE KRL++V L ++ FAVPKN KL+A PLFELYDN Q YG
Sbjct: 121 RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 210 PIISSLSQSLCRFNF 224
P+IS++ Q L RF+F
Sbjct: 181 PVISTIPQQLSRFHF 195
>At4g29820.1 68417.m04245 expressed protein
Length = 222
Score = 184 bits (448), Expect = 4e-47
Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 37 INLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLL 96
++LYPL++Y FG+KE L KD + R R++ + G+R VE VLLV PHVLL
Sbjct: 29 VDLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFKHPHVLL 88
Query: 97 LQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQE-WLIEDTIGNWWRPNFEP 155
LQ + FKLPGG L PGE +I+GLKR L L + V + + + IG WWRPNFE
Sbjct: 89 LQYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSVNENVGVSGYEVGECIGMWWRPNFET 148
Query: 156 PQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGPIISSL 215
YP++PP+I PKE +LFLV+L F VPKN+KL+A PL +L++N + YGPI+S +
Sbjct: 149 LMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTYGPIMSQI 208
Query: 216 SQSLCRFNFIYM 227
+ L +F+F M
Sbjct: 209 PKLLSKFSFNMM 220
>At5g63600.1 68418.m07985 flavonol synthase, putative similar to
SP|Q96330; contains Pfam profile PF03171: 2OG-Fe(II)
oxygenase superfamily
Length = 325
Score = 37.1 bits (82), Expect = 0.010
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 82 GVLLVHEHGLPHVLLLQL---GTAFFKLPGGELN--PGEDEIDGLKRLLTETLGRQDGVK 136
GV V HG+P L+ QL GT FF+LP E E++ +G K+ + D
Sbjct: 58 GVFQVVNHGIPTELMRQLQMVGTQFFELPDAEKETVAKEEDFEGYKKNYLGGINNWDEHL 117
Query: 137 QEWLIEDTIGN--WWRPNFEPPQYPYIPPHITK 167
L +I N +W N PPQY + TK
Sbjct: 118 FHRLSPPSIINYKYWPKN--PPQYREVTEEYTK 148
>At5g03540.1 68418.m00310 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit
Length = 638
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 119 DGLKRLLTETLGRQDGVKQEW-LIEDTIGNW 148
+ LK+L E L ++D + +W ++E IGNW
Sbjct: 240 ESLKKLGVEKLSKEDVQRMQWEVLEAKIGNW 270
>At5g63590.1 68418.m07983 flavonol synthase, putative similar to
SP|Q96330 Flavonol synthase 1 (EC 1.14.11.-) (FLS 1)
{Arabidopsis thaliana}; contains Pfam profile PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family
Length = 308
Score = 28.7 bits (61), Expect = 3.4
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Query: 82 GVLLVHEHGLPHVL---LLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQE 138
G+ V HG+P L LLQ+G FF+LP E D L T ++D +
Sbjct: 39 GIFQVVNHGIPTELILRLLQVGMEFFELPETEKEAVAKPEDSLDIEGYRTKYQKDLEGRN 98
Query: 139 WLIEDTIGNWWRPN-FEPPQYPYIPPHITKPKEHKRLFLVQLQDRAL 184
++ W P+ +P PP + E + +L ++ +
Sbjct: 99 AWVDHLFHRIWPPSRVNHKFWPKNPPEYIEVNEEYASHIKKLSEKIM 145
>At1g71290.1 68414.m08227 F-box family protein-related contains weak
hit to TIGRFAM TIGR01640 : F-box protein interaction
domaincontains weak hit to TIGRFAM TIGR01640 : F-box
protein interaction domain;
Length = 199
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 133 DGVKQEWLIEDTIGNWWRPNFEPPQY 158
+GV + W+ +T G WWR E P +
Sbjct: 101 NGVFELWVRNETDGTWWRNCIEIPHW 126
>At4g12720.3 68417.m01998 MutT/nudix family protein similar to
SP|P53370 Nucleoside diphosphate-linked moiety X motif 6
{Homo sapiens}; contains Pfam profile PF00293: NUDIX
domain
Length = 282
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 82 GVLLVHEHGLPHVLLLQLGTAFFK------LPGGELNPGEDEIDGLKRLLTETLG 130
G L+++++ VL++Q + FFK LP G +N GED G+ R + E G
Sbjct: 107 GALVINKN-TKEVLVVQERSGFFKDKNVWKLPTGVINEGEDIWTGVAREVEEETG 160
>At4g12720.2 68417.m01997 MutT/nudix family protein similar to
SP|P53370 Nucleoside diphosphate-linked moiety X motif 6
{Homo sapiens}; contains Pfam profile PF00293: NUDIX
domain
Length = 282
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 82 GVLLVHEHGLPHVLLLQLGTAFFK------LPGGELNPGEDEIDGLKRLLTETLG 130
G L+++++ VL++Q + FFK LP G +N GED G+ R + E G
Sbjct: 107 GALVINKN-TKEVLVVQERSGFFKDKNVWKLPTGVINEGEDIWTGVAREVEEETG 160
>At4g12720.1 68417.m01996 MutT/nudix family protein similar to
SP|P53370 Nucleoside diphosphate-linked moiety X motif 6
{Homo sapiens}; contains Pfam profile PF00293: NUDIX
domain
Length = 282
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 82 GVLLVHEHGLPHVLLLQLGTAFFK------LPGGELNPGEDEIDGLKRLLTETLG 130
G L+++++ VL++Q + FFK LP G +N GED G+ R + E G
Sbjct: 107 GALVINKN-TKEVLVVQERSGFFKDKNVWKLPTGVINEGEDIWTGVAREVEEETG 160
>At4g11330.1 68417.m01829 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK5) similar to mitogen-activated
protein kinase homolog 5 (AtMPK5)[Arabidopsis thaliana]
SWISS-PROT:Q39025; PMID:12119167; possible internal
deletion at position 161, missing one A residue;
reference GI:457401
Length = 250
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 111 LNPGEDEIDGLKRLLTETLGRQDGVKQEWL 140
L PG+D + LK L+TE +G DG E+L
Sbjct: 117 LFPGKDYVHQLK-LITELIGSPDGASLEFL 145
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.140 0.439
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,898,848
Number of Sequences: 28952
Number of extensions: 250767
Number of successful extensions: 599
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 594
Number of HSP's gapped (non-prelim): 10
length of query: 227
length of database: 12,070,560
effective HSP length: 79
effective length of query: 148
effective length of database: 9,783,352
effective search space: 1447936096
effective search space used: 1447936096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
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