GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001803-TA|BGIBMGA001803-PA|IPR011356|Peptidase M17,
leucyl aminopeptidase, IPR000819|Peptidase M17, leucyl aminopeptidase,
C-terminal
         (510 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g30910.1 68417.m04389 cytosol aminopeptidase family protein c...    84   2e-16
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt...    78   1e-14
At4g30920.1 68417.m04390 cytosol aminopeptidase family protein c...    78   2e-14
At5g65200.1 68418.m08200 armadillo/beta-catenin repeat family pr...    30   4.2  

>At4g30910.1 68417.m04389 cytosol aminopeptidase family protein
           contains Pfam profiles: PF00883 cytosol aminopeptidase
           family catalytic domain, PF02789: cytosol aminopeptidase
           family N-terminal domain
          Length = 581

 Score = 84.2 bits (199), Expect = 2e-16
 Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 12/253 (4%)

Query: 180 VLARDIGGGDPERMSPIKIAEHLKSTFSGYSNXXXXXXXXXXXXNKDYPLLSAVSRAASH 239
           +  +++       +SP  +AE   +  S YSN             K+  + S ++ AA+ 
Sbjct: 265 IFTKELVNSPANVLSPAVLAEEASNLASMYSNVMTANILKEEQC-KELKMGSYLAVAAA- 322

Query: 240 IDRHKPRVVEIEYKPSDPARISETLLLVGKGVTYDTGGADIKISGKMXXXXXXXXXXXXX 299
              + P  + + YKPS    +   L LVGKG+T+D+GG +IKI  ++             
Sbjct: 323 -SANPPHFIHLIYKPSS-GPVKTKLALVGKGLTFDSGGYNIKIGPELIIELMKIDVGGSA 380

Query: 300 XXXXXXCSI--LKPPHLKVVAALCLCRNSIGEDSYVSDELLLSKSGKTVRVTNTDAEGRF 357
                  +I  +KPP ++V   +  C N I        +++ + +GKT+ V +TD+EGR 
Sbjct: 381 AVLGAAKAIGEIKPPGVEVHFIVAACENMISGTGMRPGDVITASNGKTIEVNDTDSEGRL 440

Query: 358 AMADALYKFAETAAQELNPHLYTIATLTGHARACYGNYVAAMDNHSAR-ATNHSTRLQFS 416
            +ADAL         +    +  IATLTG      G  +A M   S   A       Q S
Sbjct: 441 TLADALVYACNQGVDK----IVDIATLTGEIIVALGPSMAGMYTASDELAKEVIAASQRS 496

Query: 417 GTRV-SEPIEVSY 428
           G ++   P+E SY
Sbjct: 497 GEKLWRMPMEESY 509


>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
           cytosol aminopeptidase SP:P30184 from [Arabidopsis
           thaliana]; contains Pfam profiles: PF00883 cytosol
           aminopeptidase family catalytic domain, PF02789: cytosol
           aminopeptidase family N-terminal domain
          Length = 520

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 12/267 (4%)

Query: 166 EKIVRNAIALERARVLARDIGGGDPERMSPIKIAEHLKSTFSGYSNXXXXXXXXXXXXNK 225
           EK ++ A  +    +  R++       ++P  +AE      S YS+             K
Sbjct: 189 EKKLKYAEDVSYGVIFGRELINSPANVLTPAVLAEEAAKVASTYSDVFTANILNEEQC-K 247

Query: 226 DYPLLSAVSRAASHIDRHKPRVVEIEYKPSDPARISETLLLVGKGVTYDTGGADIKISGK 285
           +  + S ++ AA+    + P  + + YKP + + +   L LVGKG+T+D+GG +IK    
Sbjct: 248 ELKMGSYLAVAAA--SANPPHFIHLVYKPPNGS-VKTKLALVGKGLTFDSGGYNIKTGPG 304

Query: 286 MXXXXXXXXXXXXXXXXXXXCSI--LKPPHLKVVAALCLCRNSIGEDSYVSDELLLSKSG 343
                                +I  +KPP ++V   +  C N I        +++ + +G
Sbjct: 305 CSIELMKFDMGGSAAVLGAAKAIGEIKPPGVEVHFIVAACENMISGTGMRPGDVITASNG 364

Query: 344 KTVRVTNTDAEGRFAMADALYKFAETAAQELNPHLYTIATLTGHARACYGNYVAAMDNHS 403
           KT+ V NTDAEGR  +ADAL         +    +  +ATLTG      G  +A +   S
Sbjct: 365 KTIEVNNTDAEGRLTLADALVYACNQGVDK----IVDLATLTGACVIALGTSMAGIYTPS 420

Query: 404 AR-ATNHSTRLQFSGTRV-SEPIEVSY 428
              A       + SG ++   P+E SY
Sbjct: 421 DELAKEVIAASERSGEKLWRMPLEESY 447


>At4g30920.1 68417.m04390 cytosol aminopeptidase family protein
           contains Pfam profiles: PF00883 cytosol aminopeptidase
           family catalytic domain, PF02789: cytosol aminopeptidase
           family N-terminal domain
          Length = 583

 Score = 77.8 bits (183), Expect = 2e-14
 Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 12/267 (4%)

Query: 166 EKIVRNAIALERARVLARDIGGGDPERMSPIKIAEHLKSTFSGYSNXXXXXXXXXXXXNK 225
           EK ++ A  +    +  +++       ++P  +AE   +  S YS+             K
Sbjct: 252 EKKLKYAEHVSYGVIFGKELVNSPANVLTPAVLAEEALNLASMYSDVMTANILNEEQC-K 310

Query: 226 DYPLLSAVSRAASHIDRHKPRVVEIEYKPSDPARISETLLLVGKGVTYDTGGADIKISGK 285
           +  + S ++ AA+    + P  + + YKPS    +   L LVGKG+T+D+GG +IK    
Sbjct: 311 ELKMGSYLAVAAA--SANPPHFIHLIYKPSS-GPVKTKLALVGKGLTFDSGGYNIKTGPG 367

Query: 286 MXXXXXXXXXXXXXXXXXXXCSI--LKPPHLKVVAALCLCRNSIGEDSYVSDELLLSKSG 343
                                +I  +KPP ++V   +  C N I        ++L + +G
Sbjct: 368 CLIELMKFDMGGSAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTGMRPGDVLTASNG 427

Query: 344 KTVRVTNTDAEGRFAMADALYKFAETAAQELNPHLYTIATLTGHARACYGNYVAAMDNHS 403
           KT+ V NTDAEGR  +ADAL         +    +  +ATLTG      G  +A +   S
Sbjct: 428 KTIEVNNTDAEGRLTLADALVYACNQGVDK----VVDLATLTGACIIALGTSMAGIYTPS 483

Query: 404 AR-ATNHSTRLQFSGTRV-SEPIEVSY 428
            + A       + SG ++   P+E SY
Sbjct: 484 DKLAKEVIAASERSGEKLWRMPMEESY 510


>At5g65200.1 68418.m08200 armadillo/beta-catenin repeat family
           protein / U-box domain-containing protein contains Pfam
           domain, PF00514: Armadillo/beta-catenin-like repeats and
           Pfam, PF04564: U-box domain
          Length = 556

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 126 VAILGALEALYVPLQMRERDSTRNFSRIGLHAEEKRTENFEKIVR 170
           + +LGAL+ L   L+  E D TR+ S + L+       N  K+VR
Sbjct: 344 IGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVR 388


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,122,687
Number of Sequences: 28952
Number of extensions: 432999
Number of successful extensions: 902
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 895
Number of HSP's gapped (non-prelim): 4
length of query: 510
length of database: 12,070,560
effective HSP length: 84
effective length of query: 426
effective length of database: 9,638,592
effective search space: 4106040192
effective search space used: 4106040192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)