Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001801-TA|BGIBMGA001801-PA|IPR010339|TIP49, C-terminal
(408 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g67630.1 68418.m08527 DNA helicase, putative similar to RuvB-... 427 e-120
At3g49830.1 68416.m05448 DNA helicase-related similar to DNA hel... 390 e-109
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 235 3e-62
At4g27010.1 68417.m03885 expressed protein ; expression support... 32 0.79
At4g21090.2 68417.m03050 adrenodoxin-like ferredoxin 1 similar t... 32 0.79
At4g21090.1 68417.m03049 adrenodoxin-like ferredoxin 1 similar t... 32 0.79
At5g22380.1 68418.m02611 no apical meristem (NAM) family protein... 31 1.4
At4g12620.1 68417.m01988 replication control protein, putative s... 31 1.8
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 30 3.2
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 30 3.2
At1g72270.1 68414.m08355 expressed protein 30 3.2
At4g14700.1 68417.m02259 replication control protein, putative s... 29 4.2
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP... 29 7.4
At5g24350.1 68418.m02870 expressed protein weak similarity to ne... 28 9.8
>At5g67630.1 68418.m08527 DNA helicase, putative similar to
RuvB-like DNA helicase reptin [Danio rerio] GI:27733814,
reptin [Drosophila melanogaster] GI:7243682
Length = 469
Score = 427 bits (1052), Expect = e-120
Identities = 195/294 (66%), Positives = 245/294 (83%)
Query: 101 LTLKTTDMETNYDMGAQMIDSLLKEKVQAGDVITIDKATGKINKLGRSFARARDYDATGQ 160
+T+KTTDMET YDMGA+MI++L KEKVQ+GDVI IDKATGKI KLGRSF+R+RDYDA G
Sbjct: 158 MTMKTTDMETVYDMGAKMIEALNKEKVQSGDVIAIDKATGKITKLGRSFSRSRDYDAMGA 217
Query: 161 QARFVQCPEGELQKRKEVVHTVTLHEVDVINSRTHGFLALFSGDTGEIKSEIREQINSKV 220
Q +FVQCPEGELQKRKEVVH VTLHE+DVINSRT GFLALF+GDTGEI+SE+REQI++KV
Sbjct: 218 QTKFVQCPEGELQKRKEVVHCVTLHEIDVINSRTQGFLALFTGDTGEIRSEVREQIDTKV 277
Query: 221 AEWREEGKAEMIPGVLFIDEAHMLDIECFSFLNRALESETAPIVIMATNXXXXXXXXXXY 280
AEWREEGKAE++PGVLFIDE HMLDIECFSFLNRALE+E +PI+++ATN
Sbjct: 278 AEWREEGKAEIVPGVLFIDEVHMLDIECFSFLNRALENEMSPILVVATNRGVTTIRGTNQ 337
Query: 281 RSPHGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLR 340
+SPHGIP+DLLDR++I+ T PY+ +++ IL IRC+EED +M+ +A +LT + +TSLR
Sbjct: 338 KSPHGIPIDLLDRLLIITTQPYTDDDIRKILEIRCQEEDVEMNEEAKQLLTLIGRDTSLR 397
Query: 341 YAIQLITTASLVAKRRKAAEVSMEDVKKVYSLFLDEHRSEQFLKEYQDEFMFND 394
YAI LIT A+L ++RK V +ED+++VY LFLD RS Q+L EYQ ++MF++
Sbjct: 398 YAIHLITAAALSCQKRKGKVVEVEDIQRVYRLFLDVRRSMQYLVEYQSQYMFSE 451
Score = 95.5 bits (227), Expect = 6e-20
Identities = 46/63 (73%), Positives = 53/63 (84%)
Query: 4 IAAAQVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIR 63
+A ++ E R +TR+ERIGAHSHIRGLGLD +LEPR VS+GMVGQ ARKAAGVILQMIR
Sbjct: 1 MAELKLSESRDLTRVERIGAHSHIRGLGLDSALEPRAVSEGMVGQVKARKAAGVILQMIR 60
Query: 64 EVK 66
E K
Sbjct: 61 EGK 63
>At3g49830.1 68416.m05448 DNA helicase-related similar to DNA
helicase GI:4521249 from [Mus musculus]
Length = 473
Score = 390 bits (960), Expect = e-109
Identities = 175/293 (59%), Positives = 234/293 (79%)
Query: 101 LTLKTTDMETNYDMGAQMIDSLLKEKVQAGDVITIDKATGKINKLGRSFARARDYDATGQ 160
+T+KTTDME+N+D+G ++I+ L KEKVQ+GDVI +D+ GKI KLGRSF R+RD+D G
Sbjct: 159 ITMKTTDMESNFDLGWKLIEPLDKEKVQSGDVIVLDRFCGKITKLGRSFTRSRDFDVMGS 218
Query: 161 QARFVQCPEGELQKRKEVVHTVTLHEVDVINSRTHGFLALFSGDTGEIKSEIREQINSKV 220
+ +FVQCPEGEL+KRKEV+H+VTLHE+DVINSRT G+LALF+GDTGEI+SE REQ ++KV
Sbjct: 219 KTKFVQCPEGELEKRKEVLHSVTLHEIDVINSRTQGYLALFTGDTGEIRSETREQSDTKV 278
Query: 221 AEWREEGKAEMIPGVLFIDEAHMLDIECFSFLNRALESETAPIVIMATNXXXXXXXXXXY 280
AEWREEGKAE++PGVLFIDE HMLDIECFSFLNRALE++ +PI+++ATN
Sbjct: 279 AEWREEGKAEIVPGVLFIDEVHMLDIECFSFLNRALENDMSPILVVATNRGMTTIRGTNQ 338
Query: 281 RSPHGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLR 340
S HGIP+D LDR++I+ T PY+Q E+++IL IRC+EED +M+ +A +LT + TSLR
Sbjct: 339 ISAHGIPIDFLDRLLIITTQPYTQDEIRNILEIRCQEEDVEMNEEAKQLLTLIGCNTSLR 398
Query: 341 YAIQLITTASLVAKRRKAAEVSMEDVKKVYSLFLDEHRSEQFLKEYQDEFMFN 393
YAI LI A+L +RK V ++D+++VY LFLD RS Q+L E++ E++F+
Sbjct: 399 YAIHLINAAALACLKRKGKVVEIQDIERVYRLFLDTKRSMQYLVEHESEYLFS 451
Score = 89.8 bits (213), Expect = 3e-18
Identities = 44/65 (67%), Positives = 52/65 (80%)
Query: 4 IAAAQVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIR 63
+A ++ E R +TRIERIGAHSHIRGLGLD LEPR VS+GMVGQ ARKAAGV L++IR
Sbjct: 1 MAELRLSETRDLTRIERIGAHSHIRGLGLDSVLEPRAVSEGMVGQIKARKAAGVTLELIR 60
Query: 64 EVKRS 68
+ K S
Sbjct: 61 DGKIS 65
>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
protein-related similar to TATA box-binding
protein-interacting protein SP:O35753 from [ Mus
musculus]
Length = 458
Score = 235 bits (576), Expect = 3e-62
Identities = 122/298 (40%), Positives = 185/298 (62%), Gaps = 9/298 (3%)
Query: 101 LTLKTTDMETNYDMGAQMIDSLLKEKVQAGDVITIDKATGKINKLGRSFARARDYDATGQ 160
+TLKT + + + D+L+KEKV GDVI I+ +G + ++GRS A A ++D +
Sbjct: 162 ITLKTVKGTKHLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAE 221
Query: 161 QARFVQCPEGELQKRKEVVHTVTLHEVDVINSRTHGFLALFS--GDT-----GEIKSEIR 213
+ +V P+GE+ K+KE+V VTL ++D N+R G + S G EI ++R
Sbjct: 222 E--YVPLPKGEVHKKKEIVQDVTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLR 279
Query: 214 EQINSKVAEWREEGKAEMIPGVLFIDEAHMLDIECFSFLNRALESETAPIVIMATNXXXX 273
++IN V + +EG AE++PGVLFIDE HMLD+ECFS+LNRALES +PIVI ATN
Sbjct: 280 QEINKVVNRYIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGVC 339
Query: 274 XXXXXXYRSPHGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRV 333
SPHG+P+DLLDR++I+ T Y SE+ I+ IR + E+ + + L +L +
Sbjct: 340 NVRGTDMPSPHGVPIDLLDRLVIIRTQIYDPSEMIQIIAIRAQVEELTVDEECLVLLGEI 399
Query: 334 ATETSLRYAIQLITTASLVAKRRKAAEVSMEDVKKVYSLFLDEHRSEQFLKEYQDEFM 391
TSLR+A+QL++ AS+VAK + D+++V SL+LD S + L E Q++++
Sbjct: 400 GQRTSLRHAVQLLSPASIVAKMNGRDNICKADIEEVTSLYLDAKSSAKLLHEQQEKYI 457
Score = 58.0 bits (134), Expect = 1e-08
Identities = 24/59 (40%), Positives = 44/59 (74%)
Query: 8 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREVK 66
+++E++S + +RI H+HI+GLGL+ + P +++ G VGQ AR+AAG+++ MI++ K
Sbjct: 5 KIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIKLAAGFVGQLEAREAAGLVVDMIKQKK 63
>At4g27010.1 68417.m03885 expressed protein ; expression supported
by MPSS
Length = 2535
Score = 31.9 bits (69), Expect = 0.79
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 174 KRKEVVHTVTLHEVDVINSRTHGFLALFSGDTGEIKSEIREQINSKVAEWREEGK 228
K +E++H + LHE+ + + F+ L G+TG + Q + AE E K
Sbjct: 27 KLRELLHNICLHEIKLCSDAAKEFVKLLKGETGGDLLRLYFQSSPNFAELLEAWK 81
>At4g21090.2 68417.m03050 adrenodoxin-like ferredoxin 1 similar to
SP|P10109 Adrenodoxin, mitochondrial precursor (Adrenal
ferredoxin) (Hepatoredoxin) from Homo sapiens, SP|P29330
Adrenodoxin (Adrenal ferredoxin) from Ovis aries;
contains Pfam profile: PF00111 2Fe-2S iron-sulfur
cluster binding domains; identical to GI:28192428
Length = 197
Score = 31.9 bits (69), Expect = 0.79
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 143 NKLGRSFARARDYDATGQQARFVQCPEGELQKRKEVVHTVTLHEVDVINSRTHGFLALFS 202
+++ + R R G+ R +Q G+ + ++ T + + S H F FS
Sbjct: 11 SRIVKELPRERHLSMCGK--RILQRSYGQYLQSSPMLQRQTRSFKEALFSNNHKFCTSFS 68
Query: 203 GDTGEIKSEIREQIN-SKVAEWREEGKAEMIPGVLFIDEAHMLDIECFSFLNRALESETA 261
T E E E+IN + V + EE ++ G+ ++ AH DIE +L T
Sbjct: 69 -TTSEKGGEKTEKINVTFVDKDGEEIHIKVPVGMNILEAAHENDIELEGACEGSLACSTC 127
Query: 262 PIVIMAT 268
+++M T
Sbjct: 128 HVIVMDT 134
>At4g21090.1 68417.m03049 adrenodoxin-like ferredoxin 1 similar to
SP|P10109 Adrenodoxin, mitochondrial precursor (Adrenal
ferredoxin) (Hepatoredoxin) from Homo sapiens, SP|P29330
Adrenodoxin (Adrenal ferredoxin) from Ovis aries;
contains Pfam profile: PF00111 2Fe-2S iron-sulfur
cluster binding domains; identical to GI:28192428
Length = 197
Score = 31.9 bits (69), Expect = 0.79
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 143 NKLGRSFARARDYDATGQQARFVQCPEGELQKRKEVVHTVTLHEVDVINSRTHGFLALFS 202
+++ + R R G+ R +Q G+ + ++ T + + S H F FS
Sbjct: 11 SRIVKELPRERHLSMCGK--RILQRSYGQYLQSSPMLQRQTRSFKEALFSNNHKFCTSFS 68
Query: 203 GDTGEIKSEIREQIN-SKVAEWREEGKAEMIPGVLFIDEAHMLDIECFSFLNRALESETA 261
T E E E+IN + V + EE ++ G+ ++ AH DIE +L T
Sbjct: 69 -TTSEKGGEKTEKINVTFVDKDGEEIHIKVPVGMNILEAAHENDIELEGACEGSLACSTC 127
Query: 262 PIVIMAT 268
+++M T
Sbjct: 128 HVIVMDT 134
>At5g22380.1 68418.m02611 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
Length = 235
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 134 TIDKATGKINKLGRSFARARDYDATGQQARFVQCPEGELQKRKEVVHTVTLHE 186
T++ +T I KL R F+ R Y TG F + PEG LQ + + V + E
Sbjct: 141 TVNAST--IPKLRREFSLCRVYITTGSSRAFDRRPEGVLQTERMLTSDVAVAE 191
>At4g12620.1 68417.m01988 replication control protein, putative
similar to origin recognition complex subunit 1
(Replication control protein 1)[Homo sapiens]
SWISS-PROT:Q13415
Length = 813
Score = 30.7 bits (66), Expect = 1.8
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 8/144 (5%)
Query: 216 INSKVAEWREEGKAEMIPGVLFIDEAHMLDIECFSFLNRALESETAPIVIMATNXXXXXX 275
+N + AE + GK + P +L IDE +L S L L+ T P +
Sbjct: 538 LNERFAEGKRIGKEDEKPCILLIDELDLLVTRNQSVLYNILDWPTKP-----NSKLVVLG 592
Query: 276 XXXXYRSPHGIPLDLLDRMII--VATSPYSQSELKDILNIRCEEEDC-QMSADALTVLTR 332
P + + RM I + PY+ ++L++I++ R D + +A
Sbjct: 593 IANTMDLPEKLLPRISSRMGIQRLCFGPYNHTQLQEIISTRLNGIDAFEKTAIEFASRKV 652
Query: 333 VATETSLRYAIQLITTASLVAKRR 356
A R A+++ A+ VA R
Sbjct: 653 AAISGDARRALEICRRAAEVADHR 676
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 107 DMETNY-DMGAQMIDSLLKE--KVQAGDVITIDKATGKINKLGRSFARARDY-----DAT 158
+ E NY ++G + + L E V+ I D TG + K+G + ++ARD+ ++
Sbjct: 715 ESEENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLKMGHALSKARDFVNSEMKSS 774
Query: 159 GQQARFVQCPEGELQKRKEVVHTVTLHE 186
G+++ F + E +Q + + ++ E
Sbjct: 775 GEESGFREALEDFIQNAEGSIMSILEEE 802
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 107 DMETNY-DMGAQMIDSLLKE--KVQAGDVITIDKATGKINKLGRSFARARDY-----DAT 158
+ E NY ++G + + L E V+ I D TG + K+G + ++ARD+ ++
Sbjct: 715 ESEENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLKMGHALSKARDFVNSEMKSS 774
Query: 159 GQQARFVQCPEGELQKRKEVVHTVTLHE 186
G+++ F + E +Q + + ++ E
Sbjct: 775 GEESGFREALEDFIQNAEGSIMSILEEE 802
>At1g72270.1 68414.m08355 expressed protein
Length = 2777
Score = 29.9 bits (64), Expect = 3.2
Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 116 AQMIDSLLKEKVQAGDVITIDKATGKINKLGRSFARARDY--DATGQQARF-VQCPEGEL 172
++ I + E + ++ + ++T + G F + Y DA + V L
Sbjct: 392 SKRIRDAIAENLSRRKLLLMVESTSDLEDQGNEFFQEHKYADDALNSYLKVPVMAFRPSL 451
Query: 173 Q-KRKEVVHTVTLHEVDVINSRTHGFLALFSGDTG 206
+ K ++++H + LHE + + F+ L G+TG
Sbjct: 452 EAKLRQLLHNICLHEFKLCSDTAKDFVKLLKGETG 486
>At4g14700.1 68417.m02259 replication control protein, putative
similar to origin recognition complex subunit 1
(Replication control protein 1) [Homo sapiens]
SWISS-PROT:Q13415
Length = 809
Score = 29.5 bits (63), Expect = 4.2
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 214 EQINSKVAEWREEGKAEMIPGVLFIDEAHMLDIECFSFLNRALESETAPIVIMATNXXXX 273
+ +N + AE ++ GK P +L IDE +L S L L+ T P +
Sbjct: 531 QSLNERFAEGKKIGKENEKPCILLIDELDVLVTRNQSVLYNILDWPTKP-----NSKLVV 585
Query: 274 XXXXXXYRSPHGIPLDLLDRMII--VATSPYSQSELKDILNIRCEEEDC-QMSADALTVL 330
P + + RM I + PY+ +L++I++ R E + + +A
Sbjct: 586 LGIANTMDLPEKLLPRISSRMGIQRLCFGPYNHRQLQEIISTRLEGINAFEKTAIEFASR 645
Query: 331 TRVATETSLRYAIQLITTASLVAK-RRKAAEVS 362
A R A+++ A+ VA R K + +S
Sbjct: 646 KVAAISGDARRALEICRRAAEVADYRLKKSNIS 678
>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1367
Score = 28.7 bits (61), Expect = 7.4
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 347 TTASLVAKRRKAAEVSMEDVKKVYSLFLDEHRSEQFLKEY 386
TT+S + +A+VSM+ ++KV L L+ R+E +K Y
Sbjct: 1028 TTSSGLLAHALSADVSMDYLEKVADLLLEFARAETTVKSY 1067
>At5g24350.1 68418.m02870 expressed protein weak similarity to
neuroblastoma-amplified protein [Homo sapiens] GI:4337460
Length = 2376
Score = 28.3 bits (60), Expect = 9.8
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 153 RDYDATGQQARFVQCPEGELQKRKEVVHTVTLHE-VDVINSRTHGFLALFSGDTGEIKSE 211
R Y A +Q +G LQK +EV+ T E + I +RT FLAL K +
Sbjct: 2126 RKYIALSMPENVLQLIDGSLQKPEEVIIEETEAESLTGILARTDPFLALKISLLLPYK-Q 2184
Query: 212 IREQINSKVAE-WREEGKAEM 231
IR Q S V E ++EG E+
Sbjct: 2185 IRSQCLSVVEEQLKQEGIPEL 2205
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.131 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,281,103
Number of Sequences: 28952
Number of extensions: 255713
Number of successful extensions: 739
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 726
Number of HSP's gapped (non-prelim): 17
length of query: 408
length of database: 12,070,560
effective HSP length: 83
effective length of query: 325
effective length of database: 9,667,544
effective search space: 3141951800
effective search space used: 3141951800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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