Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001799-TA|BGIBMGA001799-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR001650|Helicase, C-terminal,
IPR014021|Helicase superfamily 1 and 2 ATP-binding, IPR014014|DEAD-box
RNA helicase Q motif, IPR011545|DEAD/DEAH box helicase, N-terminal
(620 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 256 3e-68
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 246 3e-65
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 244 2e-64
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 244 2e-64
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 206 5e-53
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 9e-44
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 174 2e-43
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 172 8e-43
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 162 7e-40
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 162 7e-40
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 160 3e-39
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 2e-37
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 154 2e-37
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 153 4e-37
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 4e-37
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 133 5e-31
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 116 6e-26
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 115 1e-25
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 107 3e-23
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 1e-19
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 94 3e-19
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 3e-19
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 87 3e-17
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 5e-17
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 2e-16
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 82 1e-15
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 81 3e-15
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 80 6e-15
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 77 4e-14
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 73 5e-13
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 5e-12
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 61 2e-09
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 57 4e-08
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 55 2e-07
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 54 3e-07
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 53 6e-07
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 51 2e-06
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 47 5e-05
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-04
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 6e-04
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.003
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 40 0.006
SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0) 39 0.014
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 38 0.024
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.024
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 38 0.032
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 37 0.042
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 37 0.055
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.13
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 35 0.17
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 35 0.17
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 35 0.22
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 34 0.30
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 34 0.30
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.30
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.68
SB_9061| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.90
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.6
SB_48237| Best HMM Match : zf-P11 (HMM E-Value=6.5) 31 2.1
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 31 2.8
SB_44609| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-24) 31 3.6
SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.6
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.8
SB_19851| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.4
SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.4
SB_14616| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.4
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 29 8.4
SB_1274| Best HMM Match : PARG_cat (HMM E-Value=2.5e-14) 29 8.4
SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15) 29 8.4
SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 256 bits (628), Expect = 3e-68
Identities = 148/377 (39%), Positives = 215/377 (57%), Gaps = 31/377 (8%)
Query: 164 IRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMI 223
IR K I +EG+D P PI +F + P + L K Q PTPIQ+Q + V++GRD+I
Sbjct: 54 IRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDII 113
Query: 224 GIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIR 283
G+A TGSGKTL ++LP+ C+ K P + P LI+ P+REL +Q + +
Sbjct: 114 GLAETGSGKTLAYSLPL---CMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLD 170
Query: 284 HLKLTGSP----------------EIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMD 327
++ G+P ++ GGV VS +++G ++VATPGRL+D
Sbjct: 171 VIRCPGNPGPSNQSVIYDTQQFTARYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLD 230
Query: 328 MLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQ---RQTLLFSATMPKKIQ 384
+ YL MDE DRM+ MG EE +R I G RQTLL+SAT+P+ ++
Sbjct: 231 LYK--------ITYLVMDEPDRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLE 282
Query: 385 NFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTP-PPTLIFAERK 443
ARSA++ P+T+ VG G + +V+Q++ + +LL L+ TP PP ++F
Sbjct: 283 RLARSAVLNPITIQVGPGGLIAPSVQQNVVFLYHYQKPQKLLETLRTTPYPPVIVFTSSI 342
Query: 444 QDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQ 503
Q+VD V E L + A +H K Q+ R + V+AFR G+ D+LVATDVAS+GLDF +
Sbjct: 343 QNVDYVTELLKQEQFHASGLHSEKPQDYRFKLVKAFRDGKVDILVATDVASRGLDFPEVT 402
Query: 504 HVINYDMPEDIENYVHR 520
HVINYD+P+ IE Y+HR
Sbjct: 403 HVINYDLPDTIECYIHR 419
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 246 bits (603), Expect = 3e-65
Identities = 141/405 (34%), Positives = 215/405 (53%), Gaps = 13/405 (3%)
Query: 166 NKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGI 225
+++ +LV G++P I +F+ + L + +KPTP+Q +P V+ GRD++
Sbjct: 695 DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMAC 754
Query: 226 AFTGSGKTLVFTLPIIMFCLEQEV-KMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRH 284
A TGSGKT F LP++ + + F + P + I P+RELA Q ++
Sbjct: 755 AQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQI------YLEA 808
Query: 285 LKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCM 344
K +R + GGV+VS + +Q G +++V TPGRL D ++K V L ++L +
Sbjct: 809 RKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLIL 868
Query: 345 DEADRMIDMGFEEDVRTIFSYFA----GQRQTLLFSATMPKKIQNFARSALVRPVTVNVG 400
DEADRM+DMGFE +R I +RQTL+FSAT P++IQ A L + + VG
Sbjct: 869 DEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFSATFPEEIQRLAGDFLNDYLFLTVG 928
Query: 401 RAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPP-TLIFAERKQDVDAVHEYLLLKGVE 459
R G + + Q + + +L L TL+F E K+ D + +L +G
Sbjct: 929 RVGGTTSDIEQTVIEVTDNEKRDRLTQILGDAGTDRTLVFVESKRSADFLAIFLSGEGFP 988
Query: 460 AVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVH 519
+IHG + Q+ER A++ FR+G VL+AT+VA++GLD +++HVIN+D+P DI+ YVH
Sbjct: 989 TTSIHGDRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDIDEYVH 1048
Query: 520 RI-XXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFL 563
RI D V R LV +L EA Q VP +L
Sbjct: 1049 RIGRTGRIGNKGKATTFFLRGRDDKVARGLVKVLSEANQEVPEWL 1093
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 244 bits (596), Expect = 2e-64
Identities = 129/179 (72%), Positives = 138/179 (77%), Gaps = 24/179 (13%)
Query: 340 RYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNV 399
RYL +DEADRMIDMGFEEDVRTIFSYF QRQTLLFSATMPKKIQNFA+SALV+PVTVNV
Sbjct: 18 RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNV 77
Query: 400 GRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVE 459
GRAGAASL V Q LIFAE+K DVD +HEYLLLKGVE
Sbjct: 78 GRAGAASLDVIQ------------------------VLIFAEKKSDVDDIHEYLLLKGVE 113
Query: 460 AVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYV 518
AVAIHG K QEER A+ F +G KDVLVATDVASKGLDF +IQHVIN+DMPEDIENYV
Sbjct: 114 AVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYV 172
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 244 bits (596), Expect = 2e-64
Identities = 129/179 (72%), Positives = 138/179 (77%), Gaps = 24/179 (13%)
Query: 340 RYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNV 399
RYL +DEADRMIDMGFEEDVRTIFSYF QRQTLLFSATMPKKIQNFA+SALV+PVTVNV
Sbjct: 18 RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNV 77
Query: 400 GRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVE 459
GRAGAASL V Q LIFAE+K DVD +HEYLLLKGVE
Sbjct: 78 GRAGAASLDVIQ------------------------VLIFAEKKSDVDDIHEYLLLKGVE 113
Query: 460 AVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYV 518
AVAIHG K QEER A+ F +G KDVLVATDVASKGLDF +IQHVIN+DMPEDIENYV
Sbjct: 114 AVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYV 172
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 206 bits (502), Expect = 5e-53
Identities = 109/282 (38%), Positives = 159/282 (56%), Gaps = 6/282 (2%)
Query: 294 RSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDM 353
R C+ GG + + + + H++VATPGRL+DM+D+ V L+ R+L +DEADRM+DM
Sbjct: 955 RPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDM 1014
Query: 354 GFEEDVRTIFSYFA----GQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTV 409
GFE +R I + G RQTL+FSAT PK+IQ AR L + + VG+ G+ S +
Sbjct: 1015 GFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLENYIFLAVGKVGSTSENI 1074
Query: 410 RQDLEPAQPEARTVQLLHCLQKTPPP--TLIFAERKQDVDAVHEYLLLKGVEAVAIHGGK 467
Q + + LL L + P TL+F E K+ DA+ +L G +IHG +
Sbjct: 1075 TQKVVWVDEFDKRSFLLDLLNASGPQQLTLVFVETKKGADALEMFLAKDGYYCTSIHGDR 1134
Query: 468 DQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXX 527
Q ER A+ FR G+ +LVAT VA++GLD N++HVIN+D+P DIE YVHRI
Sbjct: 1135 SQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRIGRTGRV 1194
Query: 528 XXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGE 569
+ +V ++L+ +L E+ Q +P +L M E
Sbjct: 1195 GHTGLATSFFNHKNKNVAKELMDILEESKQEIPSWLESMAYE 1236
Score = 49.2 bits (112), Expect = 1e-05
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
I F+ + + +L + G +KPTP+Q +P V RD++ A TGSGKT F +PI
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 241 I 241
+
Sbjct: 934 L 934
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 175 bits (426), Expect = 9e-44
Identities = 110/333 (33%), Positives = 177/333 (53%), Gaps = 15/333 (4%)
Query: 194 LRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPF 253
L+G++ G T IQ + + +L GRD++G A TGSGKTL F +P++ E K+ F
Sbjct: 584 LQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVV----ELLYKLQF 639
Query: 254 IRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQK 313
G +II P+REL+ QT+ + + ++H T + +GGV E +QK
Sbjct: 640 KTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYG------IIMGGVNRKAEAERLQK 693
Query: 314 GVHIMVATPGRLMDMLDKKMVRL-NVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQT 372
GV++++ATPGRL+D L L + L +DEADR++++GFEE++R I +RQT
Sbjct: 694 GVNLLIATPGRLLDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIRILPSKRQT 753
Query: 373 LLFSATMPKKIQNFARSALVR-PVTVNVGRAGAASLT--VRQDLEPAQPEARTVQLLHCL 429
+LFSAT K +++ A+ +L R P+ V V S + Q E R + L L
Sbjct: 754 VLFSATQTKNVEDLAKLSLKRSPLYVGVDDHKETSTVEGLEQGYIVVPSEKRFLVLFTFL 813
Query: 430 QKT-PPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLV 488
+K ++F V E L + + IHG + Q++R+ F + +L+
Sbjct: 814 KKNRSKKVMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILL 873
Query: 489 ATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
TDVA++GLD + ++ YD +D + Y+HR+
Sbjct: 874 CTDVAARGLDIPEVDWIVQYDPADDPKEYIHRV 906
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 174 bits (424), Expect = 2e-43
Identities = 106/372 (28%), Positives = 181/372 (48%), Gaps = 16/372 (4%)
Query: 198 EAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNE 257
E +G +KP+ IQ + + +L GRD+I A +G+GKT F++ ++ ++ +++ P
Sbjct: 13 ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQ-AIDTQLREP----- 66
Query: 258 GPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHI 317
L++ P+RELA Q ++ L L ++ IGG + E + + G HI
Sbjct: 67 --QALVLSPTRELANQIQKVV------LALGDYMSVQCHACIGGTNIGEDIRKLDYGQHI 118
Query: 318 MVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSA 377
+ TPGR+ DM+ ++ +R + L +DEAD M++ GF+E + ++ Y Q +L SA
Sbjct: 119 VSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSA 178
Query: 378 TMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPPT- 436
T+P +I + P+ + V R ++Q + E L L T T
Sbjct: 179 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 238
Query: 437 -LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASK 495
+IF K+ VD + E + ++HG Q+ER ++ FR G+ VL++TDV ++
Sbjct: 239 AVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWAR 298
Query: 496 GLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREA 555
GLD + VINYD+P + E Y+HRI D +LRD+
Sbjct: 299 GLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQ 358
Query: 556 GQRVPGFLLDML 567
+P + D++
Sbjct: 359 IDEMPMNVADLI 370
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 172 bits (418), Expect = 8e-43
Identities = 112/345 (32%), Positives = 180/345 (52%), Gaps = 23/345 (6%)
Query: 183 TFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+F + K ++ A GI+KPT IQ+ +P +L GRD IG A TGSGKT F LPI+
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 243 FCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSP-EIRSCLAIGG 301
+ P+ G + +++ P+RELA Q D K+ G P ++ + +GG
Sbjct: 68 KLCDD----PY----GIFAVVLTPTRELAFQIAD-------QFKVLGRPIGLKEAVIVGG 112
Query: 302 VAVSECMEVVQKGVHIMVATPGRLMDMLDKK-MVRLNVCRYLCMDEADRMIDMGFEEDVR 360
+ + + + H+++ATPGRL D + + L ++L +DEADR++D F +D++
Sbjct: 113 LDMMKQALSLANKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLK 172
Query: 361 TIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGR--AGAASLTVRQDLEPAQP 418
IF +RQTLLFSAT+ + + + +P + V A A L R L PA
Sbjct: 173 VIFDAVPEKRQTLLFSATLTDTMGELQKMSGSQPFSYEVQSDIATVAELDQRYLLTPAH- 231
Query: 419 EARTVQLLHCLQKTPP--PTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAV 476
R L+H L++ ++F ++ + G+ V +H Q ER A+
Sbjct: 232 -VRDCYLVHLLRENDDNQSVIVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAAL 290
Query: 477 EAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
F+ G +LVATDVAS+GLD ++ V+N ++P D ++Y+HR+
Sbjct: 291 ARFKSGTIKILVATDVASRGLDIPQVELVVNSNIPADPKDYIHRV 335
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 162 bits (394), Expect = 7e-40
Identities = 107/350 (30%), Positives = 180/350 (51%), Gaps = 31/350 (8%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F+ + +L G+ KG KP+PIQ + +P L GRD++ A G+GKT + +P++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLE- 107
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
+ I+ L++ P+RELA QT I +H+ G+ + + GG +
Sbjct: 108 --RTDTTKNCIQ-----ALVLVPTRELALQTSQICIELGKHM---GAQVM---VTTGGTS 154
Query: 304 VSE-CMEVVQKG------VHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFE 356
+ + + + K VH++VATPGR++D++ KK+ ++ C+ L MDEAD+++ M F+
Sbjct: 155 LKDDILRLYNKDIFVHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFK 214
Query: 357 EDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPA 416
+ + I + RQ LLFSAT P +++F L +P +N+ LT+ +
Sbjct: 215 KMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL----MDELTL-HGVTQY 269
Query: 417 QPEARTVQLLHCL----QKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEE 471
Q +HCL QK ++IF Q V+ + +L G IH Q
Sbjct: 270 YAFVEEKQKVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSH 329
Query: 472 RSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
R+R FR+G LV +D+ ++G+D ++ VIN+D P++ E Y+HRI
Sbjct: 330 RNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRI 379
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 162 bits (394), Expect = 7e-40
Identities = 107/350 (30%), Positives = 180/350 (51%), Gaps = 31/350 (8%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F+ + +L G+ KG KP+PIQ + +P L GRD++ A G+GKT + +P++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLE- 107
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
+ I+ L++ P+RELA QT I +H+ G+ + + GG +
Sbjct: 108 --RTDTTKNCIQ-----ALVLVPTRELALQTSQICIELGKHM---GAQVM---VTTGGTS 154
Query: 304 VSE-CMEVVQKG------VHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFE 356
+ + + + K VH++VATPGR++D++ KK+ ++ C+ L MDEAD+++ M F+
Sbjct: 155 LKDDILRLYNKDIFVHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFK 214
Query: 357 EDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPA 416
+ + I + RQ LLFSAT P +++F L +P +N+ LT+ +
Sbjct: 215 KMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL----MDELTL-HGVTQY 269
Query: 417 QPEARTVQLLHCL----QKTP-PPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEE 471
Q +HCL QK ++IF Q V+ + +L G IH Q
Sbjct: 270 YAFVEEKQKVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSH 329
Query: 472 RSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
R+R FR+G LV +D+ ++G+D ++ VIN+D P++ E Y+HRI
Sbjct: 330 RNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRI 379
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 160 bits (389), Expect = 3e-39
Identities = 88/246 (35%), Positives = 140/246 (56%), Gaps = 16/246 (6%)
Query: 172 VEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSG 231
V G++ PP I +F + F + ++ + G ++PTP+Q +P V+ GRD++ A TGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 232 KTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSP 291
KT + LP++ ++Q + P P L + P+RELAKQ +I K +
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAP---PRSPLALCVAPTRELAKQI------YIEARKFSDHT 579
Query: 292 EIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMI 351
I+ C+ GGV+V +++G H +V TPGRL D + ++ + L ++L +DEADRM+
Sbjct: 580 PIKVCVCYGGVSVPYQASQLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRML 639
Query: 352 DMGFEEDVRTIF--SYFAGQ--RQTLLFSATMPKKIQNFARSALVRP--VTVNVGRAGAA 405
D+GF D+ + S + RQTL+FSAT P +IQ+ A S L +P + + VGR G
Sbjct: 640 DLGFGPDIHKLIEESNMTAKESRQTLMFSATFPDEIQHLAGSFL-KPDYLFLAVGRVGGT 698
Query: 406 SLTVRQ 411
+L + Q
Sbjct: 699 NLDITQ 704
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 154 bits (374), Expect = 2e-37
Identities = 112/331 (33%), Positives = 160/331 (48%), Gaps = 41/331 (12%)
Query: 164 IRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMI 223
+R K+ I V G P P +F H F + ++ + +PT IQ Q +P L+GRD+I
Sbjct: 499 LRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDII 558
Query: 224 GIAFTGSGKTLVFTLPIIMFCLEQ-EVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFI 282
GIA TGSGKT F P ++ ++Q E+++ +GP LI P+REL +Q + + F
Sbjct: 559 GIAKTGSGKTAAFLWPALVHIMDQPELQV----GDGPIVLICAPTRELCQQIYTEARRFG 614
Query: 283 RHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYL 342
+ + I GG E + +Q+G I+VATPGRL+D + K L+ YL
Sbjct: 615 K------AYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYL 668
Query: 343 CMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRA 402
DEADRM DMGF LLFSAT KK+++ R LV PV V +G
Sbjct: 669 VFDEADRMFDMGF----------------ALLFSATFKKKVEHLCRDILVDPVRVVIGEL 712
Query: 403 GAASLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVA 462
G P + + LIF +K + + + L E
Sbjct: 713 GEMIFL------PLHMPLMVI--------SAGSVLIFVTKKLNSEELATNLRKNDFEVAL 758
Query: 463 IHGGKDQEERSRAVEAFRRGEKDVLVATDVA 493
+HG DQ ERS+ + F++ E +LVATDVA
Sbjct: 759 LHGDMDQFERSKVLGQFKKREIPILVATDVA 789
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 154 bits (374), Expect = 2e-37
Identities = 128/414 (30%), Positives = 185/414 (44%), Gaps = 60/414 (14%)
Query: 160 RHEM--IRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVL 217
+HE+ R + V G + P P+ TF+ FP I + +G +PT IQ Q
Sbjct: 59 QHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ------ 112
Query: 218 NGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDI 277
F LP I+ Q + P +GP L++CP+RELA+Q ++
Sbjct: 113 ------------------FILPGIVHINHQPLLQP---GDGPIVLVLCPTRELAQQVQEV 151
Query: 278 IQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLN 337
+H KL RS GG + +++GV I +ATPGRL+DML+ + L
Sbjct: 152 AYSVGKHCKL------RSTCIYGGAPKGPQIRELERGVEICIATPGRLIDMLESRKTNLR 205
Query: 338 VCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTV 397
C YL +DEADRM+DMGFE +RTI RQTL++SAT PK++Q A L V +
Sbjct: 206 RCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHI 265
Query: 398 NVGRAGAAS----LTVRQDLEPAQPEARTVQLL-HCLQKTPPPTLIFAERKQDVDAVHEY 452
VG G + L + E + E + + + TLIF E K+ D +
Sbjct: 266 TVGSLGLTANHKILQIVDVCEDHEKEHNVGSFIGGIVILSSLQTLIFTETKRRADELTRK 325
Query: 453 LLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPE 512
L G +R R V D+ V VA D ++I+ VIN+D P
Sbjct: 326 LRSDGCGI----------QRPRYVSV------DMAVVIMVA----DISDIKFVINFDFPN 365
Query: 513 DIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDM 566
E+YVHRI + ++LV +L+EA Q V LL++
Sbjct: 366 CTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAKELVSVLQEAKQHVNPKLLNL 419
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 153 bits (371), Expect = 4e-37
Identities = 110/355 (30%), Positives = 183/355 (51%), Gaps = 32/355 (9%)
Query: 173 EGDDPPPPIRT--FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGS 230
EG +P R F + + + LE +GI PIQ + +G D+IG A TG+
Sbjct: 62 EGVEPSVAQREGDFSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQARTGT 121
Query: 231 GKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGS 290
GKTL F LP++ Q+ K+ R P L++ P+RELAKQ + ++ +L++
Sbjct: 122 GKTLSFALPLVEKL--QDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENLKSNLEVY-- 177
Query: 291 PEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRM 350
C+ GG+ + G+ ++V TPGR++D + + + L+ +++ +DE DRM
Sbjct: 178 -----CI-YGGMPYEPQENAINSGLDVLVGTPGRILDFMRQGTLDLSKLKHVVLDEVDRM 231
Query: 351 IDMGFEEDVRTIFSY-FAGQR----QTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAA 405
+DMGF E V + + +A R QTLLFSAT+P N A+ + + + V G
Sbjct: 232 LDMGFAESVEEVLAASYAEDREDKPQTLLFSATLPPWAVNTAKKYMKKDRKL-VDLIGHD 290
Query: 406 SLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHG 465
L ++ ++C T+IFA+ K++ + + +LK E +HG
Sbjct: 291 KLKTSTSVQ-----------VYC--GAHGRTMIFAQTKKEANELALNSVLKQ-ETQVLHG 336
Query: 466 GKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
Q++R +++FR G+ LVATDVA++GLD I V+ + P+D++ Y+HR
Sbjct: 337 DIPQKQREVTLKSFREGKFRCLVATDVAARGLDIPEIDLVVQCEPPKDVDAYIHR 391
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 153 bits (371), Expect = 4e-37
Identities = 106/367 (28%), Positives = 179/367 (48%), Gaps = 38/367 (10%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGM--------PA--------------VLN 218
+ +F M + +LRG+ A G +KP+ IQ + + P+ VL+
Sbjct: 62 VESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLTKNHYVLS 121
Query: 219 GRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGP---YGLIICPSRELAKQTH 275
RD+I A +G+GKT F + I+ QE+ + G L++ P+RELA+Q
Sbjct: 122 ARDVIAQAQSGTGKTATFAISIL-----QEIDTNYKDKNGCDCCQALVLAPTRELAQQIQ 176
Query: 276 DIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVR 335
++ L L ++ IGG V E +++GVH++V TPGR+ DM+++ ++
Sbjct: 177 KVV------LALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVLN 230
Query: 336 LNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPV 395
+ +DEAD M+ GF++ + +F+ Q +L SATMP + + V
Sbjct: 231 TRDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVV 290
Query: 396 TVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPPT--LIFAERKQDVDAVHEYL 453
+ V R ++Q + E + L L +T T +IFA ++ VD + +
Sbjct: 291 RILVKREEVTLEGIKQFFVLVEKEDWKLDTLCDLYETLTITQAVIFANTRRKVDWLAAKM 350
Query: 454 LLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPED 513
K ++HG Q+ER ++ FR G VL+ TD+ ++G+D + VINYD+P +
Sbjct: 351 TEKDHTVSSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSN 410
Query: 514 IENYVHR 520
ENY+HR
Sbjct: 411 RENYIHR 417
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 133 bits (321), Expect = 5e-31
Identities = 98/320 (30%), Positives = 155/320 (48%), Gaps = 32/320 (10%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
+ F K L GL G PT IQ QG+P L+GRD++G A TGSGKTL F +PI
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 241 IMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
I E + + +G L+I P+RELA QT +++ +K+ ++ + L IG
Sbjct: 109 I----ETLWRQKWTSMDGLGALVISPTRELAYQTFEVL------VKIGNKHDLSAGLIIG 158
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDK-KMVRLNVCRYLCMDEADRMIDMGFEEDV 359
G + + + K +I+V TPGRL+ +D+ + L +DEADR++DMGF +
Sbjct: 159 GKDLKNEQKRIMK-TNIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTL 217
Query: 360 RTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPE 419
I +RQTLL+SAT + +++ AR +L V + P+
Sbjct: 218 NAIIENLPSERQTLLYSATQTRSVKDLARLSLQSYVVCEL------------------PD 259
Query: 420 ARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYL--LLKGVEAVAIHGGKDQEERSRAVE 477
L+F + V ++E L G+ +A++G + Q +R +
Sbjct: 260 KLNFLFSFIRNHLKSKILVFVSSCKQVKFIYEGFRRLQPGIPLMALYGKQKQLKRVAIYD 319
Query: 478 AFRRGEKDVLVATDVASKGL 497
F + + VL ATD+A++GL
Sbjct: 320 EFCKKTQCVLFATDIAARGL 339
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 116 bits (279), Expect = 6e-26
Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 255 RNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKG 314
+ G +++ P+RELA+Q + H + G L + + K
Sbjct: 202 KKSGFRAVVVSPTRELAQQIYREFCHLAK-----GCAFRIHVLTKANASTNTFGAKSSKR 256
Query: 315 VHIMVATPGRLMDMLDKKM--VRLNVCRYLCMDEADRMIDMG---FEEDVRTIFSYFAGQ 369
I+V TP RL+ +L ++ + L+ +L +DEAD++ + G F E + TI Y A
Sbjct: 257 FDILVTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATI--YQACN 314
Query: 370 RQTL---LFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLE-PAQPEARTVQL 425
+ + LFSAT+ I+ +A L V V VG +A+ TV Q+L Q + + +
Sbjct: 315 KPDIHRGLFSATLSNGIEEWAGLHLDNHVRVTVGIRNSATATVDQELLFVGQESGKLLAV 374
Query: 426 LHCLQKT-PPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEK 484
+QK PP LIF + K + L+ G+ IH + Q +R V++FR G+
Sbjct: 375 RDIVQKGFTPPVLIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKI 434
Query: 485 DVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
VL+AT++ +G+DF + VINYD P Y+HRI
Sbjct: 435 WVLIATELMGRGIDFKGVNLVINYDFPTSAVAYIHRI 471
Score = 45.6 bits (103), Expect = 1e-04
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 153 ILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHM----KFPKGILRGLEAKGIQKPTPI 208
+ E + + + R++ I V+G D P P+ TF + FP I+ ++ +G PTPI
Sbjct: 130 LAEKHQEKINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPI 189
Query: 209 QVQGMPAVLNG 219
Q+Q P + +G
Sbjct: 190 QMQATPLMAHG 200
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 115 bits (276), Expect = 1e-25
Identities = 95/377 (25%), Positives = 171/377 (45%), Gaps = 31/377 (8%)
Query: 160 RHEMIRNKLRILVEGDDPPPPI---RTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAV 216
R +++ K + V DP P+ ++F+ + + RG+ G KP+ IQ +P +
Sbjct: 78 RDKLVVTKHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPML 137
Query: 217 LNGR--DMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQT 274
L +MI + +G+GKT F L ++ + P+ P + + P+ ELA+QT
Sbjct: 138 LADPPVNMIAQSQSGTGKTAAFVLTMLS---RVDATKPY-----PQVICLSPTYELARQT 189
Query: 275 HDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDK-KM 333
+ + +H P I+ A+ G + HI++ TPG L+D + K K
Sbjct: 190 GKVAEAMGKHC-----PHIKINYAVRGNQFPRGQKCTD---HIIIGTPGTLLDWIRKSKC 241
Query: 334 VRLNVCRYLCMDEADRMIDM-GFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALV 392
+DEAD MI + G ++ I Q LLFSAT + + FA + +
Sbjct: 242 FEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVLLFSATYDEDVMKFAETVVP 301
Query: 393 RPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPP--PTLIFAERKQDVDAVH 450
P+ + + R + ++Q + + L + ++F +++ +
Sbjct: 302 NPIIIRLRREEESLDNIKQYYVVCKNSEDKFEALCNMYGVLSIGQCVVFCHTRRNAAWLA 361
Query: 451 EYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDM 510
E ++ +G + G E+R +E FR G++ +L+ T+V+++G+D + VINYDM
Sbjct: 362 EKMVKEGHAVALLSGEITIEQRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDM 421
Query: 511 P------EDIENYVHRI 521
P D E Y+HRI
Sbjct: 422 PMDMQGKADFETYLHRI 438
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 107 bits (257), Expect = 3e-23
Identities = 65/219 (29%), Positives = 113/219 (51%), Gaps = 14/219 (6%)
Query: 184 FQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
F + +LRGL G +KP+PIQ++ +P G D+I A +G+GKT VF++ +
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 244 CLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVA 303
+ + + I I+ P+RE+A Q D+I H + + IGG++
Sbjct: 75 VITESNCIQII--------ILTPTREIAVQVKDVICAIGCHYD-----GLACKVFIGGIS 121
Query: 304 VSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIF 363
+ E + + K HI V TPGR+ ++++K ++ R +DEAD+++D F++ + IF
Sbjct: 122 LEEDKKAL-KSCHIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIF 180
Query: 364 SYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRA 402
S +Q + FSAT P+ + N + + P V + A
Sbjct: 181 SALPENKQMMAFSATYPEVLANHLKKYMTEPTFVRLNAA 219
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 95.1 bits (226), Expect = 1e-19
Identities = 90/310 (29%), Positives = 146/310 (47%), Gaps = 59/310 (19%)
Query: 213 MPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAK 272
+P V++G+D++ +A TGSGKT F +P MF E G LI+ P+RELA
Sbjct: 312 LPLVMDGKDVVAMARTGSGKTAAFLIP--MF----EKLQTHTAKVGIRALILSPTRELAL 365
Query: 273 QTHDIIQHFIRHL-KLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDK 331
QT Q FI+ L + TG ++S + +GG +V VATPGR + ++ +
Sbjct: 366 QT----QKFIKELGRFTG---LKSSVILGGDSV--------------VATPGRFLHVVME 404
Query: 332 KMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSAL 391
++L+ Y+ DEAD RQTLLFSAT+P+ + +FA++
Sbjct: 405 MELKLSSVEYVVFDEAD---------------------RQTLLFSATLPRLLVDFAKA-- 441
Query: 392 VRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQKTPPPTLIFAERKQDVDAVHE 451
GR +S + + L+ Q P L+ + + +
Sbjct: 442 --------GRTFQSSGWFFRTPPGYGRAVYELMALYLFQGLCDPALVRLDVDTKLSEQLK 493
Query: 452 YLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMP 511
LL G++ ++ DQ R+ V F+ + V+V TDVA++G+D + +VIN+ P
Sbjct: 494 MLLSGGIDCSYVYSSLDQTARTINVGKFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFP 553
Query: 512 EDIENYVHRI 521
+ +VHR+
Sbjct: 554 PKAKLFVHRV 563
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 94.3 bits (224), Expect = 3e-19
Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 27/254 (10%)
Query: 313 KGVHIMVATPGR-LMDMLDKKMVR----LNVCRYLCMDEADRMIDMGFEEDVRTIFSYFA 367
+G + ++ P R L +++++++ L + + ADRMIDMGFE +V+ I +
Sbjct: 177 QGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGADRMIDMGFEPEVQKILEH-- 234
Query: 368 GQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAA-SLTVRQDLEPAQPEARTVQLL 426
L S P + L+ + + R + T+ +E +LL
Sbjct: 235 -----LPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMFTATMPPQVERLAKNYLRKKLL 289
Query: 427 HCLQKT-PPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKD 485
L K PP +IF +K+ A +HGG++QE+R A+ + + G KD
Sbjct: 290 ELLNKDLEPPIIIFVNQKK-------------FRATTLHGGRNQEQREFALSSLKGGSKD 336
Query: 486 VLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVL 545
+LVATDVA +G+D ++ HVINYDM + IE+Y HRI D V
Sbjct: 337 ILVATDVAGRGIDIKDVSHVINYDMAKTIEDYTHRIGRTGRAGKTGIAVSFLTQSDSGVF 396
Query: 546 RDLVHLLREAGQRV 559
DL LL + + V
Sbjct: 397 YDLKQLLLSSPRHV 410
Score = 93.1 bits (221), Expect = 6e-19
Identities = 72/240 (30%), Positives = 118/240 (49%), Gaps = 32/240 (13%)
Query: 155 ELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMP 214
E+ E + R I +G P PIR ++ + P IL ++ G + PTPIQ Q +P
Sbjct: 74 EMTERDWRIFREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIP 133
Query: 215 AVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLE-QEVKMPFIRNEGPYGLIICPSRELAKQ 273
L RD+IG+A TGSGKT F +P++++ + +++ ++GPY LI+ P+RELA+Q
Sbjct: 134 IGLQNRDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQ 193
Query: 274 THDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKM 333
+ I F R L IR+ IGG R++DM +
Sbjct: 194 IEEEILKFGRPL------GIRTVSVIGGA--------------------DRMIDMGFEPE 227
Query: 334 VRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQ--RQTLLFSATMPKKIQNFARSAL 391
V+ + +L + D ED + ++ RQT++F+ATMP +++ A++ L
Sbjct: 228 VQ-KILEHLPVSNVKP--DSEDSEDPEHLLTHMGKDKYRQTVMFTATMPPQVERLAKNYL 284
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 93.9 bits (223), Expect = 3e-19
Identities = 57/164 (34%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 262 LIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI-GGVAVSECMEVVQKGVHIMVA 320
+++ P+RELA Q H R K P C+ + GG +SE + +++G I+V
Sbjct: 148 IVMTPTRELAIQIH-------RECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVC 200
Query: 321 TPGRLMDML---DKKMVRLNVCRYLCMDEADRMIDMGFEED--------VRTIFSYFAGQ 369
TPGR++DML + ++ C YL +DEADRM DMGFE V I
Sbjct: 201 TPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPD 260
Query: 370 RQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDL 413
RQT++FSAT P++++ AR L +P+ + VG V Q++
Sbjct: 261 RQTVMFSATFPRQMEALARKILDKPIEIQVGGRSVVCSDVEQNV 304
Score = 54.0 bits (124), Expect = 3e-07
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 157 PETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAV 216
PE E + I V G + P P++T+ IL L+ +KPTPIQ Q +P +
Sbjct: 80 PEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVI 139
Query: 217 LNGRDMIGIAFT 228
++GRDMI I T
Sbjct: 140 MSGRDMIAIVMT 151
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 87.4 bits (207), Expect = 3e-17
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
Query: 312 QKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFAGQRQ 371
+ GV ++VATPGR+++++ ++ V L +DE D M+ +GFE+ V+ I + +RQ
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQ 312
Query: 372 TLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQDLEPAQPEARTVQLLHCLQK 431
T+LFSAT+P I+ A L PV ++ G + V+Q + + +++ QL L+
Sbjct: 313 TMLFSATIPPSIEAMASRLLNAPVFISAGSPSLPTKAVKQLILWVEEKSKKKQLFSILKD 372
Query: 432 T---PPPTLIFAERKQDVDAVHE 451
+ PP ++F E K D + E
Sbjct: 373 SRHFNPPAVVFVESKLGADMLAE 395
Score = 63.7 bits (148), Expect = 4e-10
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 153 ILELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQG 212
I L + + +R+K+ I V+G+ P+ F H F + + + L G PTPIQ+Q
Sbjct: 167 IAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPTPIQMQV 226
Query: 213 MPAVLNGRDMIGIAFTGSGKTL 234
+P +L+GRD++ A TGSGK L
Sbjct: 227 LPVLLSGRDVMVCASTGSGKLL 248
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 502 IQHVINYDMPEDIENYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVP 560
+ VIN+DMP E YVH+I + L++ L+ G ++P
Sbjct: 397 VSKVINFDMPPTYEEYVHQIGRAGRLGATGWSISFINNASKGLFLQLINKLQPMGVKLP 455
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 86.6 bits (205), Expect = 5e-17
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 330 DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYF----AGQRQTLLFSATMPKKIQN 385
+K + + + RYL +DEADRM++ G E++ +I +G + A P +
Sbjct: 331 EKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELIHLKKSGNMEVDQEDAERPSNSSS 390
Query: 386 FAR----------SALVRPVTVNVGRAGAASLTVRQDLEPAQPEART--------VQLLH 427
R S+L+ + + R+ +T + EA+ V L +
Sbjct: 391 EKRYIQRNILVQKSSLMDKIHLERKRSKVIDVTSSRGTVETLTEAKITCTKEDKDVYLYY 450
Query: 428 CLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVL 487
L K P TL+FA V + L L + + +H Q +R + ++ F+ +L
Sbjct: 451 FLLKYPGRTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLL 510
Query: 488 VATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
+ATDVA++GLD ANI+HVI+Y +P+D E YVHR
Sbjct: 511 LATDVAARGLDIANIEHVIHYQVPKDPEVYVHR 543
Score = 79.8 bits (188), Expect = 6e-15
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 18/151 (11%)
Query: 193 ILRGLEAKGIQKPTPIQVQGMP-AVLNGRDMIGIAFTGSGKTLVFTLPIIMFC------- 244
ILR L +G KPTPIQ +P A+L RD+IG A TGSGKTL F +PII
Sbjct: 141 ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYKKRK 200
Query: 245 LEQEV--KMPFIRNEG-P-YGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIG 300
EQ K + ++G P LI+ P+RELA Q D H ++ K T ++ +G
Sbjct: 201 AEQSPSDKESDLESQGYPLLALIMAPTRELALQVKD---HLVKAAKYT---SVKVAAIVG 254
Query: 301 GVAVSECMEVVQKGVHIMVATPGRLMDMLDK 331
G+A + ++++ I+VATPGRL +++ +
Sbjct: 255 GMAAPKQQRLLKQRPEIVVATPGRLWELISQ 285
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 85.0 bits (201), Expect = 2e-16
Identities = 56/168 (33%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 459 EAVAIHGGK---DQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIE 515
E V I GK +Q +R +A++ F+ G +L+ATDVAS+GLD +I +VINYD P IE
Sbjct: 65 EKVLIFVGKKVLEQYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIE 124
Query: 516 NYVHRIXXXXXXXXXXXXXXXXXXPDHSVLRDLVHLLREAGQRVPGFLLDMLGEPD---- 571
+YVHR+ D L+ ++ +A Q VP FL DM +
Sbjct: 125 DYVHRVGRTGRAGRSGTSLTFISREDWRSAHKLIKIMVQANQEVPDFLHDMAKRYEDFRE 184
Query: 572 -VPAP--------AGQGCSYCAGLGHRITECPKLEAVQNKQASNIGRR 610
+ A G GC C GH ECP + GRR
Sbjct: 185 RMSAERGDRGDRVEGDGCYKCGKYGHFARECPDAGGSGRGRGGRGGRR 232
Score = 37.9 bits (84), Expect = 0.024
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 353 MGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVG 400
MGFE +++ I RQT++ SAT P +Q A + PV V VG
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVG 48
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 82.2 bits (194), Expect = 1e-15
Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 15/140 (10%)
Query: 220 RDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQ 279
+D+IG+A TGSGKT F LPI+ L+ ++ + LI+ P+RELA Q + +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRL--------FALILTPTRELAFQISEQCE 53
Query: 280 HFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDK-KMVRLNV 338
L ++ + +GG+ + ++ K HI++ATPGRL+D L+ K L
Sbjct: 54 ------ALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRT 107
Query: 339 CRYLCMDEADRMIDMGFEED 358
+YL MDEADR+++M FE++
Sbjct: 108 LKYLVMDEADRILNMDFEKE 127
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 81.0 bits (191), Expect = 3e-15
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 181 IRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPI 240
+ +F + +L+ L+A I +PT IQ+ +P +++ +I A TGSGKTL + P+
Sbjct: 377 VYSFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPL 436
Query: 241 IMFCLEQEVKMPFI-RNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAI 299
+ E E + + R + P I+ P+RELA Q + H + RS I
Sbjct: 437 VHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHHAR------FRSVGLI 490
Query: 300 GGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFE 356
GG + ++ V ++VATPG L+ K + + +L +DEAD M D F+
Sbjct: 491 GGRKQKWMRDDLESPVDLLVATPGTLLKYRQKDRLFFSDLTHLVIDEADTMFDASFK 547
Score = 65.3 bits (152), Expect = 1e-10
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 419 EARTVQLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVE-------AVAIHGGKDQEE 471
E + L+ PP +L+ + + Q V A + +G E A G
Sbjct: 675 EQHNLSLIRLHGNIPPKSLLLSVKTQSVSASEKSKKRRGEEREVVALRATKARGNSGTRI 734
Query: 472 RSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
R E F+ D+LV TD+AS+GLD +++ HVIN+D P + +Y+HR+
Sbjct: 735 RCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDFPNSMVDYIHRV 784
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 79.8 bits (188), Expect = 6e-15
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 9/183 (4%)
Query: 170 ILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTG 229
+L++G+ P P T + F + R G+ PT +Q P++L GRD+ G+A G
Sbjct: 179 VLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIEG 234
Query: 230 SGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTG 289
SGK L + LPII E V GP LI+C + + + + + + IR+ + T
Sbjct: 235 SGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT- 293
Query: 290 SPEIRSCLAIGGVAVSECMEVVQKGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADR 349
R + GG A + + + G ++VATP + ML + L+ ++ D+AD
Sbjct: 294 ----RVQMIFGGGAEEDRIVPLINGCEVLVATPPCFLRMLKRCYTSLDRLCHVVFDDADM 349
Query: 350 MID 352
+ +
Sbjct: 350 LAE 352
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 77.0 bits (181), Expect = 4e-14
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 353 MGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGRAGAASLTVRQD 412
MGFE + TI Y QR+T LFSAT +++ R+ L PV V V + V++
Sbjct: 1 MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVREKLTKTKNVQRT 60
Query: 413 LEPAQ-------PEARTVQLLHCLQ-KTPPPTLIFAERKQDVDAVHEYL--LLKGVEAVA 462
Q + QL+ L+ + ++F V+ + L L V +A
Sbjct: 61 PSTLQNFYLICRSHEKFSQLVAFLKARKDKKNMVFFSTCACVNYFSKALTKFLPNVHIMA 120
Query: 463 IHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
+HG K + R + ++FR+ E +LV TDV ++G+D + VI YD P +VHR
Sbjct: 121 LHG-KMKSNRHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHR 177
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 73.3 bits (172), Expect = 5e-13
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 437 LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKG 496
+IF + Q A+ LL + A+ IH G QEER + F+ EK +LVAT++ +G
Sbjct: 339 IIFVKSVQRCTALSHLLLKQNFPAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGRG 398
Query: 497 LDFANIQHVINYDMPEDIENYVHRI 521
+D + V NYDMPED + Y+HR+
Sbjct: 399 MDIERVNIVFNYDMPEDSDTYLHRV 423
Score = 70.1 bits (164), Expect = 5e-12
Identities = 51/200 (25%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 155 ELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMP 214
E P + I+++ + V+G F+ +LR + G + P+ +Q + +P
Sbjct: 20 EAPAEGAQAIKDQAKKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIP 79
Query: 215 AVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYG-LIICPSRELAKQ 273
+ G D+I A +G GKT VF L + Q+++ P +G L++C +RELA Q
Sbjct: 80 QAILGMDIICQAKSGMGKTAVFVLATL-----QQLE-PV---DGQVSVLVMCHTRELAFQ 130
Query: 274 THDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGV-HIMVATPGRLMDMLDKK 332
H + F +++ I+ + GG+ + + + ++ HI+V TPGR++ + +K
Sbjct: 131 IHKEYERFCKYMS-----NIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRILALTREK 185
Query: 333 MVRLNVCRYLCMDEADRMID 352
+ L ++ +DE D+M++
Sbjct: 186 TLNLKHAKHFILDECDKMLE 205
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 70.1 bits (164), Expect = 5e-12
Identities = 51/200 (25%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 155 ELPETRHEMIRNKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMP 214
E P + I+++ + V+G F+ +LR + G + P+ +Q + +P
Sbjct: 20 EAPAEGAQAIKDQAKKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIP 79
Query: 215 AVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFIRNEGPYG-LIICPSRELAKQ 273
+ G D+I A +G GKT VF L + Q+++ P +G L++C +RELA Q
Sbjct: 80 QAILGMDIICQAKSGMGKTAVFVLATL-----QQLE-PV---DGQVSVLVMCHTRELAFQ 130
Query: 274 THDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGV-HIMVATPGRLMDMLDKK 332
H + F +++ I+ + GG+ + + + ++ HI+V TPGR++ + +K
Sbjct: 131 IHKEYERFCKYMS-----NIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRILALTREK 185
Query: 333 MVRLNVCRYLCMDEADRMID 352
+ L ++ +DE D+M++
Sbjct: 186 TLNLKHAKHFILDECDKMLE 205
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 61.3 bits (142), Expect = 2e-09
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 342 LCMDEADRMIDMGFEEDVRTIFSYFAGQRQTLLFSATMPKKIQNFARSALVRPVTVNVGR 401
L +DEADRM+DMGF D+R + + +RQ LLFSAT I+ A L P+ + V R
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVAR 66
Query: 402 AGAASLTVRQ 411
AS V Q
Sbjct: 67 RNTASDQVLQ 76
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 57.2 bits (132), Expect = 4e-08
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 195 RGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEVKMPFI 254
R + G PTPIQ +P L G+D+ A TG+GKT F LPI+ L + + P I
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAI 82
Query: 255 RNEGPYGLIICPSRELAKQ 273
R L+I P+RELA Q
Sbjct: 83 R-----VLVITPTRELAIQ 96
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 54.8 bits (126), Expect = 2e-07
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 190 PKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEV 249
PK ++ L+ GI KP PIQ + +P+V + + ++ + TG+GK+LVF LP V
Sbjct: 169 PK-LVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLP--------SV 219
Query: 250 KMPFIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECME 309
+ P G +I+ P+RELA Q +L G I + + GV +S +
Sbjct: 220 QDP---GRGYGTIIVVPTRELASQM------LYEVSRLLGDKSIVASF-VSGVDLSRQEK 269
Query: 310 VVQKGVH---IMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMI 351
+++ +H I++ TP RL +++ + + + +DE D+ +
Sbjct: 270 LLKDSLHPPRIVIGTPKRLWEIVQEHEHLFQRTKRIVIDEVDKTL 314
Score = 48.4 bits (110), Expect = 2e-05
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 437 LIFAERKQDVDAVHEYLLLKGVEAVAIHGG---KDQEERSRAVEAFRRGEKDVLVATDVA 493
L+F R VD L G+ A A++ D + + + FR G+ +LV T+
Sbjct: 429 LVFIHRNHSVDDFVWELRYLGLNAAALYKQVAIPDPTKYHKFLRDFRTGQIQLLVGTEET 488
Query: 494 SKGLDFANIQHVINYDMPEDIENYVH 519
+GLDF + HV ++P+++E Y+H
Sbjct: 489 VRGLDFKELDHVYLMEVPKNVEEYLH 514
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 54.4 bits (125), Expect = 3e-07
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 166 NKLRILVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGI 225
+++ +LV G++P I +F+ + L + +KPTP+Q +P V+ GRD++
Sbjct: 118 DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMAC 177
Query: 226 AFTGSGKT 233
A TGSGKT
Sbjct: 178 AQTGSGKT 185
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 53.2 bits (122), Expect = 6e-07
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 437 LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKG 496
L+F + K + L L G+ A +HG Q +R A++ F+ GE D+LVATD+A++G
Sbjct: 12 LVFLQTKWMAHKLRIVLGLMGLNADELHGNLTQLQRLEALQKFKNGEVDILVATDLAARG 71
Query: 497 LDFANIQH 504
LD +++
Sbjct: 72 LDITGVKN 79
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 51.2 bits (117), Expect = 2e-06
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 477 EAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
+ F+ EK +LVAT++ +G+D + V NYDMPED + Y+HR+
Sbjct: 6 QQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRV 50
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 46.8 bits (106), Expect = 5e-05
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 459 EAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYV 518
EA + H G +R + + F GE + AT GLD ++++ +I+Y+MP+ E+YV
Sbjct: 814 EAESYHAGMSAAQRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFESYV 873
Query: 519 HRI 521
I
Sbjct: 874 QEI 876
Score = 30.7 bits (66), Expect = 3.6
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 190 PKGILRGLEAKGIQKPTPIQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIMF 243
P + + L G Q Q + +L+G + + TG+GK+L + LP M+
Sbjct: 510 PPEVYKALGQLGFSSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMY 563
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 44.0 bits (99), Expect = 4e-04
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 443 KQDVDAVHEY---LLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDF 499
K+ D H++ L+ G + V G Q+E+ +E F++G ++L+AT VA +GLD
Sbjct: 958 KESEDLKHKFRPKALVGGGDGVV---GMSQQEQELIIEEFKKGVVNILIATSVAEEGLDI 1014
Query: 500 ANIQHVINYD 509
+ VI YD
Sbjct: 1015 KDCSFVIRYD 1024
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 43.2 bits (97), Expect = 6e-04
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 465 GGKDQEERSRAVEAFRRG-EKDVLVATDVASKGLDFANIQHVINYDM 510
GG Q E+ + FR G E ++++AT VA +GLD + +VI YDM
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDM 643
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 40.7 bits (91), Expect = 0.003
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 437 LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKG 496
+I+ + V L KG+ A H G ++R + + + G+ V+ AT G
Sbjct: 252 IIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISFGMG 311
Query: 497 LDFANIQHVINYDMPEDIENY 517
+D +++ V ++ +P+ +E Y
Sbjct: 312 VDKGDVRFVAHWSLPQSMEGY 332
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 39.9 bits (89), Expect = 0.006
Identities = 15/48 (31%), Positives = 30/48 (62%)
Query: 471 ERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYV 518
++ + ++ FR+ + ++LVAT V +GLD V+ +D P++ +YV
Sbjct: 132 KQEKVLKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSYV 179
>SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1478
Score = 38.7 bits (86), Expect = 0.014
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 424 QLLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRG- 482
Q++ L++ LIF++ + +D + +Y L+G + + G E+R ++AF
Sbjct: 1204 QMVPALKRRGHKILIFSQMTKMLDILQDYCYLRGYQYSRLDGSMKVEDRREEIDAFASDP 1263
Query: 483 EKDV-LVATDVASKGLDFANIQHVINYD 509
EK + L++T GL+ + VI YD
Sbjct: 1264 EKFIFLLSTRAGGLGLNLSAADTVIIYD 1291
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 37.9 bits (84), Expect = 0.024
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 455 LKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDI 514
L G+ A+H D E+ ++ F +GE VL++T V G+D N ++ D
Sbjct: 90 LAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMVIMDADRFG 149
Query: 515 ENYVHRI 521
+ +H++
Sbjct: 150 VSQLHQL 156
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 37.9 bits (84), Expect = 0.024
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 299 IGGVAVSECMEVVQKGVHIMVATPGRLMDMLDK 331
IGG V E +++GVH++V TPGR+ DM+++
Sbjct: 9 IGGTNVREDRMKLEEGVHVVVGTPGRVFDMINR 41
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 37.5 bits (83), Expect = 0.032
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 259 PYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGVAVSECMEVVQKGVHIM 318
P L++ P+RELA Q ++ L L ++ IGG + E + + G HI+
Sbjct: 4 PQALVLSPTRELANQIQKVV------LALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIV 57
Query: 319 VATPGRL 325
TPGR+
Sbjct: 58 SGTPGRV 64
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 37.1 bits (82), Expect = 0.042
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 441 ERKQDVDAVHEYLLLKGVEAVAIHGGKD----QEERSRAVEAFRRGEKDVLVATDVASKG 496
ER + D + EYL A+ HGG D E+ +++FR G +L++T V +G
Sbjct: 574 ERLKGYDVISEYL---NPTAIVGHGGGDGMSWYGEQEVILKSFRTGRIKLLISTSVLEEG 630
Query: 497 LDFANIQHVINYDMPEDIENYV 518
LD V+ +D ++++ V
Sbjct: 631 LDVPVCNLVVRFDSTMNLKSLV 652
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 36.7 bits (81), Expect = 0.055
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 486 VLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 521
V+VAT G+D ++ H+I++ +P ++E+YV I
Sbjct: 314 VVVATCALGMGVDIPDVDHIIHFGIPSEVEHYVQEI 349
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 35.5 bits (78), Expect = 0.13
Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 193 ILRGLEAKGIQKPTPIQVQGM-PAVLNGRDMIGIAFT 228
ILR L +G KPTPIQ + PA+L RD+IG A T
Sbjct: 83 ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 35.1 bits (77), Expect = 0.17
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 494 SKGLDFANIQHVINYDMPEDIENYVHRI 521
++G+D ++ VIN+D P++ E Y+HRI
Sbjct: 4 TRGIDIQSVNVVINFDFPKNSETYLHRI 31
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 35.1 bits (77), Expect = 0.17
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 494 SKGLDFANIQHVINYDMPEDIENYVHRI 521
++G+D ++ VIN+D P++ E Y+HRI
Sbjct: 4 TRGIDIQSVNVVINFDFPKNSETYLHRI 31
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 34.7 bits (76), Expect = 0.22
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 437 LIFAERKQDVDAVHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVLVATDVASKG 496
+I+ ++D + V + +G++A H E RS+ V+VAT G
Sbjct: 317 IIYCFSRKDAEQVAIEMSSRGIKAACYHADMPPESRSQ-----------VVVATVAFGMG 365
Query: 497 LDFANIQHVINYDMPEDIENY 517
+D +N++ VI++ + +ENY
Sbjct: 366 IDKSNVRFVIHHSFSKSMENY 386
Score = 30.3 bits (65), Expect = 4.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 208 IQVQGMPAVLNGRDMIGIAFTGSGKTLVFTLPIIM 242
+Q++ + A ++G D I I TG GK+L F LP ++
Sbjct: 93 LQLECINATMSGVDCILIMPTGGGKSLCFQLPAVV 127
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 34.3 bits (75), Expect = 0.30
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 466 GKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYD 509
G Q+E+ V FR G + LV+T V +GLD ++ ++ +D
Sbjct: 563 GLSQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFD 606
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 34.3 bits (75), Expect = 0.30
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 315 VHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFS 364
V I+ TPG+L D + + L+ ++ +DEAD ++ G + + I++
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYN 185
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 34.3 bits (75), Expect = 0.30
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 459 EAVAIHGGKDQEERSRAVEA-FRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENY 517
+A A G + +E +EA + AS+GLD N+ HVI D D
Sbjct: 73 KACAFLTGTEIKEEKEVIEAQLPLSYNSRTIKDGFASRGLDIPNVTHVIQLDFATDAAQM 132
Query: 518 VHRI 521
+HR+
Sbjct: 133 LHRV 136
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 33.1 bits (72), Expect = 0.68
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 496 GLDFANIQHVINYDMPEDIENYVHRI 521
G+D ++ H+I+Y +P ++E+YV I
Sbjct: 2 GVDIPDVDHIIHYGIPSEVEHYVQEI 27
>SB_9061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 32.7 bits (71), Expect = 0.90
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 7/51 (13%)
Query: 471 ERSRAVEAFRRGEK-DVLVATDVASKGLDFANIQHVINYDMPEDIENYVHR 520
+R R VE RR K LV +D+A++GL +Q++++ D+P+D+++ +R
Sbjct: 73 QRMRGVE--RRARKWFALVLSDIAARGL----VQNILDEDIPDDVKHQAYR 117
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 31.9 bits (69), Expect = 1.6
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 330 DKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTI 362
++ + + + RYL +DEADRM++ G E++ +I
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMVEQGHYEELSSI 34
>SB_48237| Best HMM Match : zf-P11 (HMM E-Value=6.5)
Length = 173
Score = 31.5 bits (68), Expect = 2.1
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 2 SDVKDDPAPPPP---IKRYRREEKSDSDEDVDN 31
S + PAPPPP I R R++E D DED D+
Sbjct: 38 SQLDGAPAPPPPTPTIVRARKKEYEDEDEDGDD 70
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 31.1 bits (67), Expect = 2.8
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 326 MDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSY 365
+D LD + +++ L +DEAD M++ GF+E + ++ Y
Sbjct: 28 IDKLDTRSIKM-----LVLDEADEMLNKGFKEQIYDVYRY 62
>SB_44609| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-24)
Length = 283
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 570 PDVPA---PAGQGCSYCAGLGHRITECPKLEAVQNKQ 603
PD P P G GC C + H +CP+LE +NKQ
Sbjct: 209 PDNPKGLYPEGGGCKECGSVEHLRRDCPELE--RNKQ 243
>SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 30.7 bits (66), Expect = 3.6
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 113 EEEHILESVAQS-KALMGVAELAKGIQYEEPIKTSWRPPRCILELPETRHEMIR-NKLRI 170
+ + + + AQS K L A L +G+ P S PPR L PE +R ++ +
Sbjct: 302 QNDEMRKLAAQSPKKLNAPAPLPQGVFATLPSPKSASPPRHTLPRPEPIGGPVRGSEPKG 361
Query: 171 LVEGDDPPPPIRTFQHMKFPKGILRGLEAKGIQK---PTP 207
+ D PP P RT Q + + + G + ++ PTP
Sbjct: 362 VARADAPPVPARTDQTPRPERPVPAGASPQSRRRRPVPTP 401
>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 30.3 bits (65), Expect = 4.8
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 463 IHGGKDQEERSRAVEAFRR--GEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYV 518
+H +E + +E+F+R G VLVAT G+D + I++ ++ E ++
Sbjct: 206 LHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTIHFGPSKNCEAFI 263
>SB_19851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 29.9 bits (64), Expect = 6.4
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 6 DDPAPPPPIKRYRREEKSDSD-EDVDNYEPYVPIKEXXXXXXXXXXXXXXXTAEAAADTK 64
+DP+ PPPI+R E+ +D D +D DN + + D
Sbjct: 88 EDPSLPPPIERPDSEDDNDDDNDDGDNDDDDDDDNNDDDDDDDDDDDDDDEDDDDDEDDD 147
Query: 65 SSSENDHDDETSQEE 79
+ND DD+ ++
Sbjct: 148 DDDDNDDDDDDDDDD 162
>SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1150
Score = 29.9 bits (64), Expect = 6.4
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 573 PAPAGQGCSYCAGLGHRITECPK-LEAVQNKQASNIGRR 610
P P C C GH ECPK L N+Q RR
Sbjct: 620 PCPPSNSCYDCGEEGHFARECPKRLPPTSNQQGQQNQRR 658
>SB_14616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1307
Score = 29.9 bits (64), Expect = 6.4
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 2 SDVKDDPAPPPP---IKRYRREEKSDSDEDVDN 31
S + P PPPP I R R+EE+++ +ED D+
Sbjct: 493 SQLDGPPVPPPPTPTIIRARKEEENEEEEDDDS 525
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 253 FIRNEGPYGLIICPSRELAKQTHDIIQHFIRHLKLTGSPEIRSCLAIGGV 302
F N+G G I+ P EL+ + FI K+ G+ EIR C A+G +
Sbjct: 831 FKGNKGDTG-ILNPKNELSPKNTQKNATFIPVTKIRGTFEIRQCTALGAL 879
>SB_1274| Best HMM Match : PARG_cat (HMM E-Value=2.5e-14)
Length = 334
Score = 29.5 bits (63), Expect = 8.4
Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query: 71 HDDETSQEEWGRRYN-VSLLDQH 92
HDD++ ++ WGRRY+ V +D H
Sbjct: 144 HDDKSIRDSWGRRYSQVVAIDAH 166
>SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15)
Length = 884
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 21 EKSDSDEDVDNYEPYVPIKEXXXXXXXXXXXXXXXTAEAAADT---KSSSENDHDDETSQ 77
EK+ SD D D P+ PI E + A D+ + SSE + DD+ +
Sbjct: 215 EKNTSDRDDDRSRPHDPISEHLLYLMMHHMQRRRRSRAADNDSDNDEDSSEEEEDDDDDE 274
Query: 78 EEWGR 82
++ G+
Sbjct: 275 DDDGQ 279
>SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1726
Score = 29.5 bits (63), Expect = 8.4
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 402 AGAASLTVRQDLEPAQPEARTVQ--LLHCLQKTPPPTLIFAERKQDVDAVHEYLLLKGVE 459
A SL ++ Q A +VQ L L ++F K +DAV E + +GV+
Sbjct: 307 ASPGSLANQRPARTRQQPAGSVQQYLGDLLDGADNKFIVFCRHKLVMDAVVETIAKRGVK 366
Query: 460 AVAIHGGKDQEERSRAVEAFRRGE--KDVLVATDVASKGLDFANIQHVI 506
+ I G R V F+ + ++A + AS GL V+
Sbjct: 367 YIRIAGDVPSSVRGGMVHRFQEDPTCRIAVLAIEAASFGLTLTAADQVV 415
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.137 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,750,146
Number of Sequences: 59808
Number of extensions: 786743
Number of successful extensions: 2131
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1947
Number of HSP's gapped (non-prelim): 123
length of query: 620
length of database: 16,821,457
effective HSP length: 86
effective length of query: 534
effective length of database: 11,677,969
effective search space: 6236035446
effective search space used: 6236035446
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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