Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001792-TA|BGIBMGA001792-PA|undefined
(141 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 6e-11
SB_59520| Best HMM Match : RMMBL (HMM E-Value=6.4e-18) 37 0.005
SB_39227| Best HMM Match : DRMBL (HMM E-Value=0.76) 34 0.051
SB_33834| Best HMM Match : PAN (HMM E-Value=0.00029) 32 0.16
SB_15675| Best HMM Match : CP12 (HMM E-Value=1.5) 31 0.27
SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 29 1.5
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05) 28 2.5
SB_28157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_17636| Best HMM Match : RPE65 (HMM E-Value=7.8e-12) 28 3.4
SB_20131| Best HMM Match : RVT_1 (HMM E-Value=0.0049) 27 4.4
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_21585| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
>SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1612
Score = 63.7 bits (148), Expect = 6e-11
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 1 MDDGSHKYLNVKTIPAGHCLGSVMFLFEINNQTILYTGDFRMNPENISAFGQLHKDNMPI 60
+D+ + L V + A HC G+VMFLFE TILYTGDFR P + LH+
Sbjct: 83 LDEEGREMLTVTLLDANHCPGAVMFLFEGYFGTILYTGDFRFKPAML-----LHESLKGK 137
Query: 61 KINTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQ 95
+I+ +YLD T+ + S NFP + +++++ + I++
Sbjct: 138 QIDKLYLDNTYCHPSC-NFPTKTKTMKLIFDIIRR 171
>SB_59520| Best HMM Match : RMMBL (HMM E-Value=6.4e-18)
Length = 415
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/25 (64%), Positives = 18/25 (72%)
Query: 16 AGHCLGSVMFLFEINNQTILYTGDF 40
AGH LG+ MF+ EI ILYTGDF
Sbjct: 84 AGHVLGACMFMLEIAGVKILYTGDF 108
>SB_39227| Best HMM Match : DRMBL (HMM E-Value=0.76)
Length = 600
Score = 33.9 bits (74), Expect = 0.051
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 96 WVDGEPTNRIALHTSARYGYEFVFNEIYNILNMKTYVSDDKWALYR 141
W + ++L ++YGYE++ I +K +VSD++ +YR
Sbjct: 27 WFSQGAEHVVSLQCKSKYGYEYMLKSIAIYYKIKIHVSDERLEMYR 72
>SB_33834| Best HMM Match : PAN (HMM E-Value=0.00029)
Length = 198
Score = 32.3 bits (70), Expect = 0.16
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 28 EINNQTILYTGDFRMNPENISAFGQLHKDNMPIKINTIYLDTTFQNESFDNFPRRKDSIR 87
E+N+QT D +N F + +K+NT L + S N R+K
Sbjct: 87 ELNSQTAGSRPDGVVNEVEFGYFESAEVNPTQLKLNTAVLSPVYFRRSVGNLNRQKTKES 146
Query: 88 MLVNHIKQWVDGEPTNRIALHTSAR 112
+++ IK+ + + ++I TS R
Sbjct: 147 LIIRAIKRAIRYKIISQILKETSKR 171
>SB_15675| Best HMM Match : CP12 (HMM E-Value=1.5)
Length = 153
Score = 31.5 bits (68), Expect = 0.27
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 62 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYG 114
I+T+YLDTT+ + + FP+++++I V Q V P I + G
Sbjct: 20 IDTLYLDTTYCDPQY-TFPKQEETINFAVTKAAQAVSENPKTLIVCAIAKELG 71
>SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 1269
Score = 29.1 bits (62), Expect = 1.5
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 43 NPENI-SAFGQLHKDNM--PIKINTIYLDTTFQNESFDNFPRRKDSIRMLVN 91
NP NI S + +KDN+ P IN++Y F ++ + P KDS+ VN
Sbjct: 860 NPVNINSVYNPFNKDNVYNPFNINSVY--NPFNKDNRVHNPFNKDSVYNPVN 909
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 27 FEINNQTILYTGDF--RMNPENISAFGQLHKDNMPIKINTIYLDTTFQNESF 76
+ IN TI F + NP N G ++++ P++ N I DT + ESF
Sbjct: 1174 YSINTDTIANRESFPVQWNPLNTDTIG--NRESFPVQWNPINTDTIGKRESF 1223
Score = 27.1 bits (57), Expect = 5.9
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 29 INNQTILYTGDF--RMNPENISAFGQLHKDNMPIKINTIYLDTTFQNESF 76
IN TI F + NP G ++++ P++ N IY DT ESF
Sbjct: 1230 INTDTIGNRESFPVQWNPIKTDTIG--YRESFPVQWNPIYTDTIGNRESF 1277
>SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05)
Length = 717
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 47 ISAFGQL-HKDNMPIKINTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRI 105
ISA L +DNMPI + + +S DN P +++ + N++ D PT +
Sbjct: 59 ISADNMLPSEDNMPISADNMLTSADNMPKSADNMPISANNMPISANNMLTSADNMPTGHL 118
>SB_28157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 3 DGSHKYLNVKT--IPAGHCLGSVMFLFEINNQTILYTGDFRMNPENISAFGQLHKDNMP 59
DG H + T +P G +G ++FL IN+ G R+ ++ + + L D P
Sbjct: 476 DGEHSSPAIVTSGVPQGSVVGPLLFLLYINDLPDGINGKIRLFADDCALYLHLTSDESP 534
>SB_17636| Best HMM Match : RPE65 (HMM E-Value=7.8e-12)
Length = 366
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 43 NPENISAFGQLHKDNMPIKINTIYLDTTFQNESFDN 78
+P +I FG +D IK + LDT F N SFDN
Sbjct: 159 DPCHIFHFGTASQDGDKIKFCAVCLDTKF-NMSFDN 193
>SB_20131| Best HMM Match : RVT_1 (HMM E-Value=0.0049)
Length = 186
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 3 DGSHKYLNVKT--IPAGHCLGSVMFLFEINNQTILYTGDFRMNPENISAFGQLHKDNMP 59
DG H + T +P G +G ++FL IN+ G R+ ++ + + L D P
Sbjct: 75 DGEHSSPVIVTSGVPQGSVVGPLLFLLYINDLPDGINGKIRLFADDCALYLHLTSDESP 133
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 67 LDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNEIYNIL 126
L T++ +S N ++ ++ +QW +P N I + R G+ F + YN++
Sbjct: 285 LSTSYPTDSSAN---HREYLQYSWASFRQWYRFQPLNEIKSYFGTRVGFYFAWLGTYNLM 341
>SB_21585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 101 PTNRIALHTSARYGYEFVFNEIYNILNMKTYVSD 134
PTNR+ L SA Y Y +F + IL + ++ D
Sbjct: 413 PTNRLLLPGSALYSYFIIFLAVPPILLLPFFLPD 446
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.138 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,065,070
Number of Sequences: 59808
Number of extensions: 197686
Number of successful extensions: 515
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 501
Number of HSP's gapped (non-prelim): 18
length of query: 141
length of database: 16,821,457
effective HSP length: 75
effective length of query: 66
effective length of database: 12,335,857
effective search space: 814166562
effective search space used: 814166562
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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