Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001786-TA|BGIBMGA001786-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
(138 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 111 2e-25
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 81 3e-16
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 78 2e-15
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 72 2e-13
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 65 2e-11
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 63 8e-11
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 61 2e-10
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 60 4e-10
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 60 5e-10
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 60 7e-10
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 60 7e-10
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 58 2e-09
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 58 3e-09
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 58 3e-09
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 56 7e-09
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 56 7e-09
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 55 2e-08
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 55 2e-08
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 54 3e-08
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 54 5e-08
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 54 5e-08
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 54 5e-08
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 53 8e-08
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 52 1e-07
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 52 1e-07
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 52 1e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 52 1e-07
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 52 1e-07
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 52 1e-07
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 52 1e-07
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 52 1e-07
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 52 1e-07
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 52 1e-07
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 52 1e-07
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 51 2e-07
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 51 2e-07
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 51 2e-07
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 51 2e-07
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 51 3e-07
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 51 3e-07
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 51 3e-07
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 51 3e-07
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 51 3e-07
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 51 3e-07
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 50 4e-07
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 50 4e-07
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 50 4e-07
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 50 4e-07
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 50 6e-07
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 50 7e-07
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 49 1e-06
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 49 1e-06
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 48 2e-06
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 48 2e-06
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 48 2e-06
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 48 3e-06
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 47 4e-06
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 47 5e-06
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 46 1e-05
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 46 1e-05
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 45 2e-05
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 45 2e-05
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 44 3e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 44 3e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 44 3e-05
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 44 4e-05
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 44 4e-05
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 44 5e-05
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 44 5e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 43 7e-05
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 43 7e-05
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 43 7e-05
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 43 7e-05
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 43 7e-05
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 43 7e-05
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 43 7e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 43 9e-05
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 42 1e-04
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 42 1e-04
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 42 2e-04
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 42 2e-04
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 41 3e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 40 5e-04
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 40 5e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 40 5e-04
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 40 5e-04
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 40 5e-04
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 40 6e-04
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 40 8e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 40 8e-04
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 40 8e-04
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 40 8e-04
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 39 0.001
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 39 0.001
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 39 0.001
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 39 0.001
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 38 0.002
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 38 0.002
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 38 0.002
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 38 0.002
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 38 0.002
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 38 0.002
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 38 0.003
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 38 0.003
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 38 0.003
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 38 0.003
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 38 0.003
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 38 0.003
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 37 0.004
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 37 0.004
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 37 0.004
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 37 0.004
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 37 0.004
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 37 0.004
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 37 0.004
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 37 0.006
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 37 0.006
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 37 0.006
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.007
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 36 0.007
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 36 0.007
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 36 0.007
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 36 0.007
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 36 0.007
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 36 0.010
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 36 0.010
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 36 0.010
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 36 0.013
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 36 0.013
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 35 0.017
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 35 0.017
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 35 0.023
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 35 0.023
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 35 0.023
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 34 0.030
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 34 0.040
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 34 0.040
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 34 0.040
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 33 0.053
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.053
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 33 0.070
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 33 0.092
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 33 0.092
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 33 0.092
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 33 0.092
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 32 0.12
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 32 0.12
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 32 0.12
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 32 0.12
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.12
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 32 0.16
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 31 0.21
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 31 0.21
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 31 0.21
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 31 0.28
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 31 0.28
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 31 0.28
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 31 0.37
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 0.37
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 31 0.37
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 31 0.37
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 31 0.37
At1g22770.1 68414.m02845 gigantea protein (GI) identical to giga... 30 0.49
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 30 0.65
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 30 0.65
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 30 0.65
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 30 0.65
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 30 0.65
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 30 0.65
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 0.86
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 29 0.86
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 29 0.86
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 29 0.86
At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repe... 29 0.86
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 29 1.1
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 29 1.1
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 29 1.1
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 29 1.1
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 29 1.1
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 29 1.1
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 29 1.1
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 29 1.5
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 28 2.0
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 28 2.0
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 28 2.0
At1g26330.1 68414.m03211 hypothetical protein 28 2.0
At3g47350.1 68416.m05148 short-chain dehydrogenase/reductase (SD... 28 2.6
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 28 2.6
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 28 2.6
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 27 3.5
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 27 3.5
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 27 3.5
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 27 4.6
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 27 4.6
At5g54730.1 68418.m06815 expressed protein 27 6.0
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 27 6.0
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 27 6.0
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 27 6.0
At5g15680.1 68418.m01834 expressed protein 26 8.0
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 26 8.0
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 26 8.0
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 26 8.0
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 111 bits (267), Expect = 2e-25
Identities = 46/113 (40%), Positives = 71/113 (62%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS 69
+K ++ A+ A RFN DG Y L+CG D+ I+LWNPHR +++KTY H EV D + D++
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 70 HIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
S D+ V WDV+T + +R++R H V +KFN+ S++ VS D ++
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSL 126
Score = 54.0 bits (124), Expect = 3e-08
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
+ T K + + +R V D SCG D+++ W+ +++ + GH EV +
Sbjct: 53 IKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFND 112
Query: 67 DSSHIVSASVDKSVILWDVT--TAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
SS +VSA D+S+ +WD + +P++ +V + + T + GSVD TV
Sbjct: 113 SSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTK--TEIIGGSVDGTV 168
Score = 52.8 bits (121), Expect = 8e-08
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 15 QAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVL--DAAGSCDSSHIV 72
Q + + + DG L+ D ++L + +L+ Y GH ++ D + +H++
Sbjct: 185 QPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVI 244
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
S D V WD+ A+ L ++R H VT + ++ + ++ SVD T+
Sbjct: 245 GGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTI 294
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 81.0 bits (191), Expect = 3e-16
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW--NPHRDLM---LKTYGGHANEVLDAA 63
T+ + +A+ +V+F+ DG S ADK I+ + N D + ++ + GH N + D A
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
S D+ IVSAS DK++ LWDV T ++ H + C+ FN +S M VSGS D TV
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Score = 74.1 bits (174), Expect = 3e-14
Identities = 37/107 (34%), Positives = 58/107 (54%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
++ I V F+ D + +S DK +KLW+ ++KT GH N + S+ IV
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIV 129
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
S S D++V +WDVTT + L+ H+ VT + FN + ++ VS S D
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYD 176
Score = 61.3 bits (142), Expect = 2e-10
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 8 TTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANE---VLDAAG 64
T I + VRF+ +G + L D ++LWN LKTY GH N + A
Sbjct: 192 TLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFS 251
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ IVS S D V +W++ + + L++ H +V + + + SGS+D TV
Sbjct: 252 VTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
Score = 48.0 bits (109), Expect = 2e-06
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHAN-EVLDAA 63
K L + + + AV FN DG+ +S D ++W+ +KT N V
Sbjct: 146 KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVR 205
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIK--FN-EESTMAVSGSVDN 120
S + I+ ++D ++ LW++++A+ L+ Y H ++ CI F+ VSGS DN
Sbjct: 206 FSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDN 265
Query: 121 TV 122
V
Sbjct: 266 CV 267
Score = 42.7 bits (96), Expect = 9e-05
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 20 VRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKS 79
V FN +S D+ +++W+ LK H++ V + D S IVS+S D
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL 178
Query: 80 VILWDVTTAQPLRRYRHHAS-SVTCIKFNEESTMAVSGSVDNTV 122
+WD T ++ + V+ ++F+ + G++DNT+
Sbjct: 179 CRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTL 222
Score = 36.7 bits (81), Expect = 0.006
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 50 KTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTT-----AQPLRRYRHHASSVTCI 104
+T H V S D + SAS DK++ + + T A+P++ + H + ++ +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 105 KFNEESTMAVSGSVDNTV 122
F+ ++ VS S D T+
Sbjct: 78 AFSSDARFIVSASDDKTL 95
Score = 35.5 bits (78), Expect = 0.013
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 4 LKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA 63
LKT T Q I + +G +S D + +W + +L+ GH V++ A
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA 292
Query: 64 GSCDSSHIVSASVDKSVILW 83
+ I S S+DK+V +W
Sbjct: 293 CHPTENLIASGSLDKTVRIW 312
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 77.8 bits (183), Expect = 2e-15
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
L T++ + AI V+F+ DG S DK + LW+ ++ Y GH++ + D A S
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 67 DSSHIVSASVDKSVILWDVTTA-QPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
DS + SAS D ++ +WD + + L+ R H + V C+ FN S + VSGS D T+
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETI 152
Score = 55.2 bits (127), Expect = 2e-08
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDL-MLKTYGGHANEVLDAAGSCDSSHI 71
+ I + ++ D Y S D +++W+ LK GH N V + S+ I
Sbjct: 84 HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLI 143
Query: 72 VSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
VS S D+++ +W+V T + +R + H+ ++ + FN + ++ VS S D +
Sbjct: 144 VSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGS 193
Score = 53.2 bits (122), Expect = 6e-08
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 4 LKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVL--- 60
LKTL K A+ +F+ +G + L D +KL N LK Y GH N+V
Sbjct: 205 LKTLIDDK--SPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCIT 262
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTMAVSGS-V 118
A + +IVS S D V LWD+ L+R H +V + + ++ ++ SG+ +
Sbjct: 263 SAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHL 322
Query: 119 DNTV 122
D T+
Sbjct: 323 DKTI 326
Score = 50.0 bits (114), Expect = 6e-07
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKT-YGGHANEVLDAA 63
K + IK + I +V FN DG+ +S D K+W+ LKT + V A
Sbjct: 161 KCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAK 220
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCI--KFN-EESTMAVSGSVDN 120
S + I+ A++D ++ L + T + L+ Y H + V CI F+ VSGS DN
Sbjct: 221 FSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDN 280
Query: 121 TV 122
V
Sbjct: 281 CV 282
Score = 39.1 bits (87), Expect = 0.001
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
L ++ + + V FN +S D+ I++W ++ H+ + +
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR 180
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHAS-SVTCIKFNEESTMAVSGSVDNTV 122
D S IVSAS D S +WD L+ S +V+ KF+ + ++D+T+
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTL 237
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 71.7 bits (168), Expect = 2e-13
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLM-LKTYGGHANEVLDAAGSCDSSHIVSA 74
A+ ++FN GT S D++I LW H D GH N +LD + D S IVSA
Sbjct: 55 AVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSA 114
Query: 75 SVDKSVILWDVTTAQPLRRYRHHASSV-TCIKFNEESTMAVSGSVDNT 121
S DK+V WDV T + +++ H+S V +C + +SGS D T
Sbjct: 115 SPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGT 162
Score = 50.0 bits (114), Expect = 6e-07
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN--PH--RDLMLKTYGGHAN----EVL 60
T++ +Q I + + DG+Y L+ G D K+ +W+ P+ ++ +K + GH + +L
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
+ S D + + + S D+ V +WD T+ + + + H SV F+ + S S D
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDK 336
Query: 121 TV 122
+
Sbjct: 337 NI 338
Score = 48.8 bits (111), Expect = 1e-06
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLD 61
GD K +K ++ AI + + DG+ +S DK ++ W+ +K H++ V
Sbjct: 84 GDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNS 143
Query: 62 AAGSCDSSH-IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
+ I+S S D + LWD+ ++ + +T + F++ + +G VDN
Sbjct: 144 CCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDAADKIFTGGVDN 202
Query: 121 TV 122
V
Sbjct: 203 DV 204
Score = 39.5 bits (88), Expect = 8e-04
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
I AV F+ + G D +K+W+ + T GH + + + S D S++++ +
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 77 DKSVILWDVTTAQPLRR 93
D + +WD+ P R
Sbjct: 243 DNKLCVWDMRPYAPQNR 259
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/91 (18%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQ 89
+S D KLW+ + ++T+ ++ + S + I + VD V +WD+ +
Sbjct: 155 ISGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGE 213
Query: 90 PLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
H ++T + + + + ++ +DN
Sbjct: 214 ATMTLEGHQDTITGMSLSPDGSYLLTNGMDN 244
Score = 27.5 bits (58), Expect = 3.5
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDV-TTAQPLRRYRHHASSVTCIKFNEESTM 112
GH + V + + I S S D+ + LW V + + H +++ + + + +
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 113 AVSGSVDNTV 122
VS S D TV
Sbjct: 111 IVSASPDKTV 120
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 90 PLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
P+ H S+V +KFN T+ SGS D +
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREI 77
Score = 26.2 bits (55), Expect = 8.0
Identities = 14/61 (22%), Positives = 26/61 (42%)
Query: 25 DGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD 84
DGT + +D+ + +W+ + GH V + I S S DK++ L +
Sbjct: 283 DGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGE 342
Query: 85 V 85
+
Sbjct: 343 I 343
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 64.9 bits (151), Expect = 2e-11
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDA 62
DL + T+K +++ I +V F+ ++ DK +K+W LKT+ GH + VL A
Sbjct: 530 DLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRA 589
Query: 63 AGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ D + VS D + LW+V T++ + Y H V + +++ M +G D +
Sbjct: 590 SFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVI 649
Score = 55.2 bits (127), Expect = 2e-08
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDA 62
D +TI+ + A+ + D S G ++I++W+ ++++ GH V+
Sbjct: 49 DSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGM 108
Query: 63 AGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEES--TMAVSGSVDN 120
A + +A D+ V++WDV +R H V+ I F+ +S + +SGS D
Sbjct: 109 ACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDA 168
Query: 121 TV 122
TV
Sbjct: 169 TV 170
Score = 49.6 bits (113), Expect = 7e-07
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVL 60
+ D L T + + ++ F DGT +SCGAD +KLWN + + TY H ++V
Sbjct: 570 ISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVW 629
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTA 88
A + I + D + LW +TA
Sbjct: 630 ALAVGKKTEMIATGGGDAVINLWHDSTA 657
Score = 45.6 bits (103), Expect = 1e-05
Identities = 27/117 (23%), Positives = 51/117 (43%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDA 62
+LKT + + + + I +V + + + D+ +W + + T GH +
Sbjct: 488 NLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSV 547
Query: 63 AGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
S +++AS DK+V +W ++ L+ + H SSV F + T VS D
Sbjct: 548 EFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGAD 604
Score = 33.5 bits (73), Expect = 0.053
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 54 GHANEVLDAAGSCDSSH----IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEE 109
GH EV+ + +C SS IV+ S DK+V LW+ T+ + H + + F ++
Sbjct: 399 GH-KEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKK 457
Query: 110 S-TMAVSGSVDNTV 122
S + VSGS D T+
Sbjct: 458 SFSFFVSGSGDRTL 471
Score = 30.3 bits (65), Expect = 0.49
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 35 DKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDS-SHIVSASVDKSVILWDV 85
DK ++LWN + GH ++L A + S S VS S D+++ +W +
Sbjct: 425 DKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
K L ++ + A+ ++ + DG S G DK + LW+ H T + EVL+A
Sbjct: 183 KCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATY--EVLEAVT 240
Query: 65 SCDS 68
+ S
Sbjct: 241 TVSS 244
Score = 26.2 bits (55), Expect = 8.0
Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Query: 27 TYCLSCGADKKIKLWN-------PHRDLMLKT---YGGHANEVLDAAGSCDSSHIVSASV 76
++ +S D+ +K+W+ + LKT H ++ A + + S + + S
Sbjct: 460 SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSE 519
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D++ +W + + + H + ++F+ ++ S D TV
Sbjct: 520 DRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTV 565
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 62.9 bits (146), Expect = 8e-11
Identities = 30/110 (27%), Positives = 53/110 (48%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
+QQ + V F+ DG + S DK ++LWN + + GH V + S DS ++
Sbjct: 359 HQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLL 418
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
S S D ++ +W++ T + + HA V + ++ + VSG D +
Sbjct: 419 SGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVL 468
Score = 50.8 bits (116), Expect = 3e-07
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDS 68
TI + +A+ V F+ DG S D ++LW+ + + L T GH N VL A S D
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDG 163
Query: 69 SHIVSASVDKSVILWD 84
H+VS S + W+
Sbjct: 164 KHLVSGSKSGEICCWN 179
Score = 47.6 bits (108), Expect = 3e-06
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 40 LWNPHRDLM-LKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHA 98
LW P K GH V S D I SAS DKSV LW+ T Q + +R H
Sbjct: 343 LWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHV 402
Query: 99 SSVTCIKFNEESTMAVSGSVDNTV 122
V + ++ +S + +SGS D+T+
Sbjct: 403 GPVYQVSWSADSRLLLSGSKDSTL 426
Score = 44.4 bits (100), Expect = 3e-05
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 50 KTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEE 109
+T GHA VL + S D + S S D +V LWD+ T PL + H + V + ++ +
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 110 STMAVSGS 117
VSGS
Sbjct: 163 GKHLVSGS 170
Score = 40.7 bits (91), Expect = 3e-04
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHR-DLMLKTYGGHANEVLDAAG- 64
L T K ++ + V ++ DG + +S +I WNP + +L GH + +
Sbjct: 144 LFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWE 203
Query: 65 ----SCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
S V++S D +WD+T + + H +VTC+K+ + + +GS D
Sbjct: 204 PVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDC 262
Query: 121 TV 122
T+
Sbjct: 263 TI 264
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
+T + + + V ++ D LS D +K+W + + GHA+EV S
Sbjct: 395 VTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSP 454
Query: 67 DSSHIVSASVDKSVILW 83
D +VS D+ + LW
Sbjct: 455 DGEKVVSGGKDRVLKLW 471
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 97 HASSVTCIKFNEESTMAVSGSVDNTV 122
HA +V C+ F+ + SGS D TV
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTV 133
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 61.3 bits (142), Expect = 2e-10
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 19 AVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDK 78
AV F+ G + S +D +K+W+ + ++TY GH+ + + D +VS +D
Sbjct: 105 AVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDN 164
Query: 79 SVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
V +WD+T + L ++ H + + F+ + +GS D TV
Sbjct: 165 VVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTV 208
Score = 53.6 bits (123), Expect = 5e-08
Identities = 28/122 (22%), Positives = 57/122 (46%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVL 60
+G +L ++ + A+ +V F+ L+ + IKLW+ M++ + GH +
Sbjct: 45 IGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCS 104
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
+ S S D ++ +WD+ ++ Y+ H+ ++ I+F + VSG +DN
Sbjct: 105 AVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDN 164
Query: 121 TV 122
V
Sbjct: 165 VV 166
Score = 49.2 bits (112), Expect = 1e-06
Identities = 28/114 (24%), Positives = 51/114 (44%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
+ T K + + I +RF DG + +S G D +K+W+ +L + H +
Sbjct: 135 IQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHP 194
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
+ + S D++V WD+ T + + R A+ V IKF+ + G D+
Sbjct: 195 LEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCGLDDS 248
Score = 44.8 bits (101), Expect = 2e-05
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 33 GADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVI-LWDVTTAQPL 91
G D K+ LW + L + GH + V D+ + +V A VI LWDV A+ +
Sbjct: 35 GDDYKVNLWAIGKPTSLMSLCGHTSAV-DSVAFDSAEVLVLAGASSGVIKLWDVEEAKMV 93
Query: 92 RRYRHHASSVTCIKFNEESTMAVSGSVD 119
R + H S+ + ++F+ SGS D
Sbjct: 94 RAFTGHRSNCSAVEFHPFGEFLASGSSD 121
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 60.5 bits (140), Expect = 4e-10
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 19 AVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDK 78
AV F+ G + S +D +++W+ + ++TY GH + S D +VS +D
Sbjct: 54 AVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDN 113
Query: 79 SVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
V +WD+T + L ++ H + + F+ + +GS D TV
Sbjct: 114 VVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTV 157
Score = 52.8 bits (121), Expect = 8e-08
Identities = 26/106 (24%), Positives = 49/106 (46%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+ +V FN + L+ + IKLW+ M++ + GH + + S S
Sbjct: 10 VDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSS 69
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D ++ +WD ++ Y+ H ++ I+F+ + VSG +DN V
Sbjct: 70 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVV 115
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/113 (23%), Positives = 49/113 (43%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
+ T K + + I + F+ DG + +S G D +K+W+ +L + H +
Sbjct: 84 IQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHP 143
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
+ + S D++V WD+ T + + R A+ V I F+ + G D
Sbjct: 144 LEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDD 196
Score = 33.5 bits (73), Expect = 0.053
Identities = 15/69 (21%), Positives = 34/69 (49%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
GH + V A + + +++ + + LWD+ ++ +R + H S+ + ++F+
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 64
Query: 114 VSGSVDNTV 122
SGS D +
Sbjct: 65 ASGSSDTNL 73
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 60.1 bits (139), Expect = 5e-10
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYG-GHANEVLDAA 63
K + T + +A+R + F+ DG+ L+ G DK IK W+ ++ T+ G V+
Sbjct: 317 KCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLN 376
Query: 64 GSCDSSHIVSASV-DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D +I+ A + DK ++ WD+ T + + Y H +V I F + + V+ S D ++
Sbjct: 377 PDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 436
Score = 54.0 bits (124), Expect = 3e-08
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 15 QAIRAVRF-NVDGTYCLSCGADKKIKLWNPHRD-LMLKTYGGHANEVLDAAGSCDSSHIV 72
+ + A+RF G LS G D K+K+W+ + ++TY GHA V D S D S +
Sbjct: 283 KGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFL 342
Query: 73 SASVDKSVILWDVTTAQPLRRY 94
+A DK++ WD T Q + +
Sbjct: 343 TAGYDKNIKYWDTETGQVISTF 364
Score = 30.7 bits (66), Expect = 0.37
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 34 ADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRR 93
+DKKI W+ + + + Y H V ++ V++S DKS+ +W+ ++
Sbjct: 390 SDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY 449
Query: 94 YRH-HASSVTCIKFNEESTMAVSGSVDNTV 122
H S+ I + + S+DN +
Sbjct: 450 ISEPHMHSMPSISVHPNGNWLAAQSLDNQI 479
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 59.7 bits (138), Expect = 7e-10
Identities = 28/95 (29%), Positives = 52/95 (54%)
Query: 28 YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTT 87
Y + +DK ++LW+ ++ + GH + VL A S D ++ S D ++++WD++T
Sbjct: 513 YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 572
Query: 88 AQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
A+ + H S V + ++ E ++ SGS D TV
Sbjct: 573 ARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTV 607
Score = 58.4 bits (135), Expect = 2e-09
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
L K + + +F+ G Y SC D+ ++W+ R L+ GH ++V D +C
Sbjct: 453 LVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV-DWHPNC 511
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ +I + S DK+V LWDV T + +R + H S V + + + SG D T+
Sbjct: 512 N--YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTI 565
Score = 53.6 bits (123), Expect = 5e-08
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
++ T + + + + F+ G + LS AD I+LW+ + L Y GH V DA
Sbjct: 409 RSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQF 468
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
S + S S D++ +W + QPLR H S V ++ +GS D TV
Sbjct: 469 SPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWHPNCNYIATGSSDKTV 523
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
++ + ++ + DG Y S D I +W+ + GH + V + S + S +
Sbjct: 540 HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLA 599
Query: 73 SASVDKSVILWDVTTAQPLRR 93
S S D +V LWDVT++ L +
Sbjct: 600 SGSADCTVKLWDVTSSTKLTK 620
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 59.7 bits (138), Expect = 7e-10
Identities = 31/120 (25%), Positives = 55/120 (45%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDA 62
+ K + T+ ++ +V F+ G + S D +K+W+ + + TY GH V
Sbjct: 183 EAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 242
Query: 63 AGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ D IVS D V +WD+T + L ++ H + + F+ + +GS D TV
Sbjct: 243 RFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTV 302
Score = 50.4 bits (115), Expect = 4e-07
Identities = 25/108 (23%), Positives = 48/108 (44%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDS 68
T K + + + +RF DG + +S G D +K+W+ +L + H ++
Sbjct: 231 TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE 290
Query: 69 SHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSG 116
+ + S DK+V WD+ T + + + V C+ FN + + G
Sbjct: 291 FLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCG 338
Score = 50.0 bits (114), Expect = 6e-07
Identities = 27/122 (22%), Positives = 51/122 (41%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVL 60
+G + ++ + I +V F+ + A IKLW+ +++T GH + +
Sbjct: 139 IGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCV 198
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
S S+D ++ +WD+ + Y+ H V ++F + VSG DN
Sbjct: 199 SVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDN 258
Query: 121 TV 122
V
Sbjct: 259 VV 260
Score = 40.3 bits (90), Expect = 5e-04
Identities = 19/90 (21%), Positives = 39/90 (43%)
Query: 33 GADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLR 92
G D K+ LW + + + GH++ + + + + ++ LWD+ A+ +R
Sbjct: 129 GEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVR 188
Query: 93 RYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
H S+ + F+ SGS+D +
Sbjct: 189 TLTGHRSNCVSVNFHPFGEFFASGSLDTNL 218
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/59 (20%), Positives = 24/59 (40%)
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
G S +V+ D V LW + + H+S + + F+ + +G+ T+
Sbjct: 118 GRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTI 176
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 58.0 bits (134), Expect = 2e-09
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
I VR++ G L+ D + +WN ++ L + GH V + D I + S
Sbjct: 158 IEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSD 217
Query: 77 DKSVILWDVTTAQPL---RRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D S+I+W+ T + + + + +H +TC+ N S++A+SGS D +V
Sbjct: 218 DASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSV 266
Score = 41.1 bits (92), Expect = 3e-04
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 46 DLMLKTYGGHANEVLDAAGS-CDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCI 104
D + T+ GH E+ A S D++ + + D LW + H SV+C+
Sbjct: 60 DDSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCL 119
Query: 105 KFNEESTMAVSGSVDNTV----ASPGTLSVV 131
F+ + + SG +D V AS GTL V
Sbjct: 120 AFSYDGQLLASGGLDGVVQIFDASSGTLKCV 150
Score = 40.7 bits (91), Expect = 3e-04
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 22 FNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHA--NEVLDAAG-SCDSSHIVSASVDK 78
F DG + D + +WNP + GH E L + +SS +S S D
Sbjct: 205 FTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDG 264
Query: 79 SVILWDVTTAQPLRRYRHHASSVTCIKFNEEST---MAVSGSVD 119
SV + ++ T + + H SV C+KF+ S +A +G +D
Sbjct: 265 SVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMD 308
Score = 38.7 bits (86), Expect = 0.001
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDG-TYCLSC--GADKKIKLWNPHRDLMLKTYGGHANEVLD 61
K ++++ + ++ V+F+ T L+ G DKK+ +W+ + H V
Sbjct: 275 KVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTP-RFICEHEEGVTS 333
Query: 62 AAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
S ++ + + +V +WD + Y H +V I + + VS SVDNT
Sbjct: 334 LTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNT 393
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/77 (20%), Positives = 38/77 (49%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
+++ + ++ + Y + A+ + +W+ + TY GH + V + S ++ IV
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIV 386
Query: 73 SASVDKSVILWDVTTAQ 89
S SVD + +++ + Q
Sbjct: 387 SVSVDNTARVFESSEFQ 403
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 57.6 bits (133), Expect = 3e-09
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDA 62
+ K + T+ ++ +V F+ G + S D +K+W+ + + TY GH V
Sbjct: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 149
Query: 63 AGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ D +VS D V +WD+T + L ++ H + + F+ + +GS D TV
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTV 209
Score = 51.2 bits (117), Expect = 2e-07
Identities = 27/122 (22%), Positives = 51/122 (41%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVL 60
+G + ++ + I +V F+ + A IKLW+ +++T GH + +
Sbjct: 46 IGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
S S+D ++ +WD+ + Y+ H V ++F + VSG DN
Sbjct: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDN 165
Query: 121 TV 122
V
Sbjct: 166 IV 167
Score = 49.6 bits (113), Expect = 7e-07
Identities = 24/108 (22%), Positives = 48/108 (44%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDS 68
T K + + + +RF DG + +S G D +K+W+ +L + H ++
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 69 SHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSG 116
+ + S D++V WD+ T + + + V C+ FN + + G
Sbjct: 198 FLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCG 245
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/90 (21%), Positives = 39/90 (43%)
Query: 33 GADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLR 92
G D K+ LW + + + GH++ + + + + ++ LWD+ A+ +R
Sbjct: 36 GEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVR 95
Query: 93 RYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
H S+ + F+ SGS+D +
Sbjct: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/59 (20%), Positives = 24/59 (40%)
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
G S +V+ D V LW + + H+S + + F+ + +G+ T+
Sbjct: 25 GRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTI 83
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 57.6 bits (133), Expect = 3e-09
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDA 62
+ K + T+ ++ +V F+ G + S D +K+W+ + + TY GH V
Sbjct: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 149
Query: 63 AGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ D +VS D V +WD+T + L ++ H + + F+ + +GS D TV
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTV 209
Score = 51.2 bits (117), Expect = 2e-07
Identities = 27/122 (22%), Positives = 51/122 (41%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVL 60
+G + ++ + I +V F+ + A IKLW+ +++T GH + +
Sbjct: 46 IGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
S S+D ++ +WD+ + Y+ H V ++F + VSG DN
Sbjct: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDN 165
Query: 121 TV 122
V
Sbjct: 166 IV 167
Score = 49.6 bits (113), Expect = 7e-07
Identities = 24/108 (22%), Positives = 48/108 (44%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDS 68
T K + + + +RF DG + +S G D +K+W+ +L + H ++
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 69 SHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSG 116
+ + S D++V WD+ T + + + V C+ FN + + G
Sbjct: 198 FLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCG 245
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/90 (21%), Positives = 39/90 (43%)
Query: 33 GADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLR 92
G D K+ LW + + + GH++ + + + + ++ LWD+ A+ +R
Sbjct: 36 GEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVR 95
Query: 93 RYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
H S+ + F+ SGS+D +
Sbjct: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/59 (20%), Positives = 24/59 (40%)
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
G S +V+ D V LW + + H+S + + F+ + +G+ T+
Sbjct: 25 GRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTI 83
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 56.4 bits (130), Expect = 7e-09
Identities = 29/104 (27%), Positives = 52/104 (50%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+R+V F+ + + AD+ IK+W+ ++ T GH +V A S +++ SA
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGD 238
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
DK V WD+ + +R Y H S V C+ + + ++G D+
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDS 282
Score = 48.8 bits (111), Expect = 1e-06
Identities = 26/114 (22%), Positives = 53/114 (46%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDS 68
T+ + + +R + + TY S G DK++K W+ ++ ++++Y GH + V A
Sbjct: 213 TLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTL 272
Query: 69 SHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+++ D +WD+ T + H ++V + V+GS D T+
Sbjct: 273 DVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTI 326
Score = 47.2 bits (107), Expect = 4e-06
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 10/117 (8%)
Query: 15 QAIRAVRFNVDGTYCLSC----------GADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
+ IR+ ++ G YCL+ G D ++W+ + + GH N V
Sbjct: 251 KVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFT 310
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
+V+ S D ++ WD+ + + HH SV + + + S S DNT
Sbjct: 311 RPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNT 367
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTY 52
++ I A ++ G+ ++C ADK IK+W + +T+
Sbjct: 434 SEAGIYAACYDNTGSRLVTCEADKTIKMWKEDENATPETH 473
Score = 26.2 bits (55), Expect = 8.0
Identities = 16/69 (23%), Positives = 24/69 (34%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
GH V A + + S D+++ +WDV T H V + + T
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYM 233
Query: 114 VSGSVDNTV 122
S D V
Sbjct: 234 FSAGDDKQV 242
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 56.4 bits (130), Expect = 7e-09
Identities = 26/104 (25%), Positives = 54/104 (51%)
Query: 4 LKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA 63
++ + ++ ++ A+ F+ G Y ++ D+ +K+W+ L L + GH ++ D A
Sbjct: 295 MQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLA 354
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFN 107
S +++ + SAS D + +W + P+ R H +VT I F+
Sbjct: 355 VSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFS 398
Score = 36.7 bits (81), Expect = 0.006
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 49 LKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE 108
+K GH N V A ++++ S D+ V +W + TA L R H +T + +
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSS 357
Query: 109 ESTMAVSGSVD 119
+ + S S D
Sbjct: 358 NNALVASASND 368
Score = 35.5 bits (78), Expect = 0.013
Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 15 QAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANE--VLDAAGSCDSSHIV 72
+ + + +++D + L+ D +I +WN ++ GH+ VLD + +
Sbjct: 598 RGVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVH-PFNPRIAM 656
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAV 114
SA D I+WD+ P++ Y + KF+++ T V
Sbjct: 657 SAGYDGKTIIWDIWEGIPIKVYEIGRFKLVDGKFSQDGTSIV 698
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 54.8 bits (126), Expect = 2e-08
Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 51 TYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-E 109
++ GH ++VLD + S S H++S+S+DK+V LWD+++ L+ + H+ VTCI+FN +
Sbjct: 463 SFVGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVD 520
Query: 110 STMAVSGSVDNTV 122
+SGS+D V
Sbjct: 521 DNYFISGSLDAKV 533
Score = 33.1 bits (72), Expect = 0.070
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 28 YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTT 87
+ LS DK ++LW+ LK + D ++ +S S+D V +W +
Sbjct: 481 HLLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPD 540
Query: 88 AQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
Q + H VT + + A+ GS T
Sbjct: 541 HQVVDWNDLH-EMVTAACYTPDGQGALVGSYKGT 573
Score = 30.3 bits (65), Expect = 0.49
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW 41
I+ ++ +I +++F++DG Y S G D I++W
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIW 390
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 54.8 bits (126), Expect = 2e-08
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+R+V F+ + + AD+ IK+W+ ++ T GH +V A S +++ SA
Sbjct: 173 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGD 232
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
DK V WD+ + +R Y H V C+ + + ++G D+
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDS 276
Score = 44.8 bits (101), Expect = 2e-05
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+R + + TY S G DK++K W+ ++ ++++Y GH + V A +++
Sbjct: 215 VRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGR 274
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D +WD+ T + H S V + ++GS D+T+
Sbjct: 275 DSVCRVWDIRTKMQI-FVLPHDSDVFSVLARPTDPQVITGSHDSTI 319
Score = 34.7 bits (76), Expect = 0.023
Identities = 22/116 (18%), Positives = 47/116 (40%), Gaps = 11/116 (9%)
Query: 15 QAIRAVRFNVDGTYCLSC----------GADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
+ IR+ ++ G YCL+ G D ++W+ + + H ++V
Sbjct: 245 KVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLA 303
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
+++ S D ++ WD+ + + +H +V + + + VS S DN
Sbjct: 304 RPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADN 359
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTY 52
++ I A ++ G+ ++C DK IK+W D +T+
Sbjct: 427 SEAGIYAACYDQTGSRLVTCEGDKTIKMWKEDEDATPETH 466
Score = 26.2 bits (55), Expect = 8.0
Identities = 16/69 (23%), Positives = 24/69 (34%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
GH V A + + S D+++ +WDV T H V + + T
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYM 227
Query: 114 VSGSVDNTV 122
S D V
Sbjct: 228 FSAGDDKQV 236
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 54.4 bits (125), Expect = 3e-08
Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 51 TYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-E 109
++ GH ++VLD A S S H++S+S+DK+V LW++++ L+ + H+ VTCI+FN +
Sbjct: 508 SFQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVD 565
Query: 110 STMAVSGSVDNTV 122
+SGS+D V
Sbjct: 566 DRYFISGSLDAKV 578
Score = 35.1 bits (77), Expect = 0.017
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Query: 28 YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTT 87
+ LS DK ++LWN LK + D + +S S+D V +W +
Sbjct: 526 HLLSSSMDKTVRLWNLSSQTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPD 585
Query: 88 AQPLRRYRHHASSVTCIKFNEESTMAVSGS 117
Q + Y H VT + + + GS
Sbjct: 586 RQVVDWYDLH-EMVTSACYTPDGQGVLVGS 614
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW 41
I+ + +I +++F++DG Y S G D I +W
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIW 440
Score = 27.5 bits (58), Expect = 3.5
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 11 KCNQQAIRAVRFNVDGTYC--LSCGADKKIKLWNPHRDLMLKTYG-GHANEVLDAAGSCD 67
K +Q+ I +F V G+ L +D +I++ + DL+ K G + + + A+ + D
Sbjct: 643 KAHQKKITGFQF-VPGSSSEVLVTSSDSRIRVVDG-TDLVNKLKGFRNTSSQISASITAD 700
Query: 68 SSHIVSASVDKSVILW--DVTTAQPLRRYRHHASSVT 102
++VSAS D V +W + ++P R + +VT
Sbjct: 701 GKYVVSASEDSHVYIWKYESPASRPSRSNNNKNVTVT 737
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 53.6 bits (123), Expect = 5e-08
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+++V ++ + +S G D+ +KLW+ L + GH N VL + + + +++AS
Sbjct: 271 VKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASK 330
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTMAVSGSVDNTV 122
D+ + L+D+ T + L+ +R H VT + ++ VSGS D ++
Sbjct: 331 DQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSI 377
Score = 47.2 bits (107), Expect = 4e-06
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA- 63
+ L ++ ++ + +V++N +G + L+ D+ IKL++ L+++ GH +V A
Sbjct: 301 RELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAW 360
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQP-LRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
C + VS S D S+ W V P + H +SV + ++ + SGS D+T
Sbjct: 361 HPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHT 419
Score = 33.5 bits (73), Expect = 0.053
Identities = 18/69 (26%), Positives = 30/69 (43%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
GH +V S +VS D+ V LWD + + L H + V +K+N+
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 114 VSGSVDNTV 122
++ S D +
Sbjct: 326 LTASKDQII 334
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 53.6 bits (123), Expect = 5e-08
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 10 IKCNQQAIRAVRFNVDGT-YCLSCGADKKIKLWNPHRDLMLKTYG-------GHANEVLD 61
++ + + A+ +D + ++ DK I LW +D K+YG GH++ V D
Sbjct: 11 MRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDD--KSYGVAQRRLTGHSHFVED 68
Query: 62 AAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
S D +S S D + LWD+ T + RR+ H V + F+ ++ VS S D T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 122 VASPGTL 128
+ TL
Sbjct: 129 IKLWNTL 135
Score = 39.5 bits (88), Expect = 8e-04
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLM--LKTYGGHANEVLDAAGSCDS--SHIV 72
+ +V F+ D +S D+ IKLWN + + GH V S ++ IV
Sbjct: 108 VLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIV 167
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
SAS DK+V +W++ + H+ + + + + ++ SG D +
Sbjct: 168 SASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVI 217
Score = 37.1 bits (82), Expect = 0.004
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 1 MGDLK-TLTTIKCNQQAIRAVRFNVDGTY--CLSCGADKKIKLWNPHRDLMLKTYGGHAN 57
+G+ K T++ +++ + VRF+ + +S DK +K+WN + + GH+
Sbjct: 135 LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSG 194
Query: 58 EVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSV 101
+ A S D S S D ++LWD+ + L Y A S+
Sbjct: 195 YLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL--YSLEAGSI 236
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 53.6 bits (123), Expect = 5e-08
Identities = 32/106 (30%), Positives = 51/106 (48%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+R V F+ +S G D KIK+WN L T GH + + ++ IVSAS
Sbjct: 54 VRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASD 113
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D+++ +W+ + + H V C F+ + + VS S+D TV
Sbjct: 114 DQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTV 159
Score = 46.0 bits (104), Expect = 9e-06
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
+ L T+ + IR V+F+ + + +S D+ I++WN + GH + V+ A+
Sbjct: 84 RCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASF 143
Query: 65 SCDSSHIVSASVDKSVILWDV 85
+VSAS+D++V +WD+
Sbjct: 144 HPKEDLVVSASLDQTVRVWDI 164
Score = 40.7 bits (91), Expect = 3e-04
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 35 DKKIKLW--NPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLR 92
D+++KLW N + + T GH N V IVS S DKS+ +WD T ++
Sbjct: 225 DRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQ 284
Query: 93 RYRHHASSVTCIKFNEESTMAVSG 116
+R + + E + +G
Sbjct: 285 TFRREHDRFWILAVHPEINLLAAG 308
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 72 VSASVDKSVI-LWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
+ AS+ VI LWD + R+ H V + F+ + VSG D
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDD 72
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 52.8 bits (121), Expect = 8e-08
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 25 DGTYCLSCGADKKIKLWNPH-RDLMLK-TYGGHANEVLDAAGSCDSSHIVSASVDKSVIL 82
D + +S D +K+W+P R L+ T GH V A S D IVS S D SVI+
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTV--RAISSDRGKIVSGSDDLSVIV 923
Query: 83 WDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTVASPGTLSVVD 132
WD T Q L + H S V+C+K +SG T A GT+ + D
Sbjct: 924 WDKQTTQLLEELKGHDSQVSCVKM-------LSGERVLTAAHDGTVKMWD 966
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor
3 subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 52.4 bits (120), Expect = 1e-07
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS 69
+K +++ + +R+N +G SC D LW L TY GH V S DSS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 70 HIVSASVDKSVILWDVTTAQPLRRYRHHA 98
+++ S D++ LWDV + + L ++ +A
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNA 94
Score = 46.4 bits (105), Expect = 7e-06
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYG---GHANEVLDAAGSCDSSHIVSASVDKSVILWDVT 86
+S G DK I++W+ +LK GH ++ + D SH ++ S+DK+ LWD+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
Query: 87 TAQPLRRY 94
T L+ Y
Sbjct: 224 TLTLLKTY 231
Score = 34.7 bits (76), Expect = 0.023
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
GH + + + + S + D + LW + L YR H +V C + +S+
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 114 VSGSVDNT 121
++GS D T
Sbjct: 68 ITGSADQT 75
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRH---HASSVTCIKFNEESTMAVSGSVDNT 121
IVS DK + +WD T + L++ H +T + + + ++GS+D T
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKT 216
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor
3 subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 52.4 bits (120), Expect = 1e-07
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS 69
+K +++ + +R+N +G SC D LW L TY GH V S DSS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 70 HIVSASVDKSVILWDVTTAQPLRRYRHHA 98
+++ S D++ LWDV + + L ++ +A
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNA 94
Score = 46.4 bits (105), Expect = 7e-06
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYG---GHANEVLDAAGSCDSSHIVSASVDKSVILWDVT 86
+S G DK I++W+ +LK GH ++ + D SH ++ S+DK+ LWD+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
Query: 87 TAQPLRRY 94
T L+ Y
Sbjct: 224 TLTLLKTY 231
Score = 34.7 bits (76), Expect = 0.023
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
GH + + + + S + D + LW + L YR H +V C + +S+
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 114 VSGSVDNT 121
++GS D T
Sbjct: 68 ITGSADQT 75
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRH---HASSVTCIKFNEESTMAVSGSVDNT 121
IVS DK + +WD T + L++ H +T + + + ++GS+D T
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKT 216
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor
3 subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 52.4 bits (120), Expect = 1e-07
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS 69
+K +++ + +R+N +G SC D LW L TY GH V S DSS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 70 HIVSASVDKSVILWDVTTAQPLRRYRHHA 98
+++ S D++ LWDV + + L ++ +A
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNA 94
Score = 46.4 bits (105), Expect = 7e-06
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYG---GHANEVLDAAGSCDSSHIVSASVDKSVILWDVT 86
+S G DK I++W+ +LK GH ++ + D SH ++ S+DK+ LWD+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
Query: 87 TAQPLRRY 94
T L+ Y
Sbjct: 224 TLTLLKTY 231
Score = 34.7 bits (76), Expect = 0.023
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
GH + + + + S + D + LW + L YR H +V C + +S+
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 114 VSGSVDNT 121
++GS D T
Sbjct: 68 ITGSADQT 75
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRH---HASSVTCIKFNEESTMAVSGSVDNT 121
IVS DK + +WD T + L++ H +T + + + ++GS+D T
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKT 216
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 52.4 bits (120), Expect = 1e-07
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 6 TLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGS 65
T+ +K +++ V F+ + AD+ KLW L L+T+ GH + + A
Sbjct: 290 TIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTL-LQTFEGHLDRLARVAFH 348
Query: 66 CDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
++ + S DK+ LWD+ T L H+ SV I F ++ +A S +D+
Sbjct: 349 PSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDS 403
Score = 49.6 bits (113), Expect = 7e-07
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
+ +++ + F DG SCG D ++W+ + + GH V S + H+
Sbjct: 380 HSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLA 439
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFN-EESTMAVSGSVDNTV 122
S D +WD+ + L HA+ V+ +K+ +E + S D V
Sbjct: 440 SGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKV 490
Score = 48.0 bits (109), Expect = 2e-06
Identities = 28/114 (24%), Positives = 47/114 (41%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
L T + + + V F+ G Y + DK +LW+ + L GH+ V A
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQ 391
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
D + S +D +WD+ T + + ++ H V + F+ SG DN
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDN 445
Score = 40.7 bits (91), Expect = 3e-04
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGA-DKKIKLWNPHRDLMLKTYGGHANEVLDAA 63
K+L I + + V++ Y L+ + D K+ +W+ ++K+ GH ++V
Sbjct: 456 KSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLD 515
Query: 64 GSCDSSHIVSASVDKSVILW 83
+ DSS I + S D+++ LW
Sbjct: 516 ITADSSCIATVSHDRTIKLW 535
Score = 38.3 bits (85), Expect = 0.002
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 3 DLKTLTTIKCNQQAIR---AVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEV 59
DL+T +I Q I+ +V F+ +G + S G D + ++W+ L HAN V
Sbjct: 409 DLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLV 468
Query: 60 LDAAGSCDSSH-IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
+ + +AS D V +W ++ H S V + +S+ + S
Sbjct: 469 SQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSH 528
Query: 119 DNTV 122
D T+
Sbjct: 529 DRTI 532
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 52.4 bits (120), Expect = 1e-07
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 49 LKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE 108
L + GH E+LD + S + +++S+SVD++V LW V + LR + H+ + VTC+ FN
Sbjct: 315 LHEFKGHIGEILDLSWS-EKGYLLSSSVDETVRLWRVGCDECLRTFTHN-NFVTCVAFNP 372
Query: 109 -ESTMAVSGSVDNTV 122
+ +SGS+D V
Sbjct: 373 VDDNYFISGSIDGKV 387
Score = 45.6 bits (103), Expect = 1e-05
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 28 YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA-GSCDSSHIVSASVDKSVILWDVT 86
Y LS D+ ++LW D L+T+ H N V A D ++ +S S+D V +WDVT
Sbjct: 335 YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVT 393
Query: 87 TAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
+ + Y VT + + ++ AV GS+
Sbjct: 394 RCRVV-DYTDIRDIVTAVCYRPDAKGAVIGSM 424
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTY 52
+I A++F+ DG Y S G D +++W+ + TY
Sbjct: 220 SILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTY 256
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 52.4 bits (120), Expect = 1e-07
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 49 LKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE 108
L + GH E+LD + S + +++S+SVD++V LW V + LR + H+ + VTC+ FN
Sbjct: 315 LHEFKGHIGEILDLSWS-EKGYLLSSSVDETVRLWRVGCDECLRTFTHN-NFVTCVAFNP 372
Query: 109 -ESTMAVSGSVDNTV 122
+ +SGS+D V
Sbjct: 373 VDDNYFISGSIDGKV 387
Score = 45.6 bits (103), Expect = 1e-05
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 28 YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA-GSCDSSHIVSASVDKSVILWDVT 86
Y LS D+ ++LW D L+T+ H N V A D ++ +S S+D V +WDVT
Sbjct: 335 YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVT 393
Query: 87 TAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
+ + Y VT + + ++ AV GS+
Sbjct: 394 RCRVV-DYTDIRDIVTAVCYRPDAKGAVIGSM 424
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTY 52
+I A++F+ DG Y S G D +++W+ + TY
Sbjct: 220 SILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTY 256
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 52.4 bits (120), Expect = 1e-07
Identities = 32/106 (30%), Positives = 50/106 (47%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+R V F+ +S G D KIK+WN L T GH + + + IVSAS
Sbjct: 54 VRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASD 113
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D+++ +W+ + + H V C F+ + + VS S+D TV
Sbjct: 114 DQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTV 159
Score = 44.4 bits (100), Expect = 3e-05
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
+ L T+ + IR V+F+ + + +S D+ I++WN + GH + V+ A+
Sbjct: 84 RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASF 143
Query: 65 SCDSSHIVSASVDKSVILWDV 85
+VSAS+D++V +WD+
Sbjct: 144 HPKEDLVVSASLDQTVRVWDI 164
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 35 DKKIKLW--NPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLR 92
D+++KLW N + + T GH N V IVS S DKS+ +WD T L+
Sbjct: 225 DRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQ 284
Query: 93 RYRHHASSVTCIKFNEESTMAVSG 116
+R + + E + +G
Sbjct: 285 TFRREHDRFWILAVHPEMNLLAAG 308
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 72 VSASVDKSVI-LWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
+ AS+ VI LWD + R+ H V + F+ + VSG D
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDD 72
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 52.4 bits (120), Expect = 1e-07
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 9 TIKCNQQAIRAVRFNVDGT-YCLSCGADKKIKLWNPHRDLMLKTYG-------GHANEVL 60
T+ + + A+ VD + ++ DK I LW ++ K+YG GH++ V
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKED--KSYGVAQRRMTGHSHFVQ 67
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
D S D +S S D + LWD+ T + RR+ H V + F+ ++ VS S D
Sbjct: 68 DVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDR 127
Query: 121 TVASPGTL 128
T+ TL
Sbjct: 128 TIKLWNTL 135
Score = 41.1 bits (92), Expect = 3e-04
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 1 MGDLK-TLTTIKCNQQAIRAVRFNVDGTY--CLSCGADKKIKLWNPHRDLMLKTYGGHAN 57
+G+ K T++ +++ + VRF+ + +S DK +K+WN + T GH+
Sbjct: 135 LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSG 194
Query: 58 EVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSV 101
+ A S D S S D ++LWD+ + L Y A S+
Sbjct: 195 YLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL--YSLEAGSI 236
Score = 40.7 bits (91), Expect = 3e-04
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLM--LKTYGGHANEVLDAAGSCDS--SHIV 72
+ +V F+ D +S D+ IKLWN + + GH V S ++ IV
Sbjct: 108 VLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIV 167
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
SAS DK+V +W++ + H+ + + + + ++ SG D +
Sbjct: 168 SASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVI 217
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 52.0 bits (119), Expect = 1e-07
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 52 YGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ES 110
+ GH E+LD + S + ++S+SVD++V LW V ++ R H S VTC+ FN +
Sbjct: 359 FRGHTGEILDLSWS-EKGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDD 417
Query: 111 TMAVSGSVDNTV 122
+SGS+D V
Sbjct: 418 NYFISGSIDGKV 429
Score = 35.5 bits (78), Expect = 0.013
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 28 YCLSCGADKKIKLWNP-HRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVT 86
+ LS D+ ++LW D ++ + + A D ++ +S S+D V +WDV+
Sbjct: 376 FLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVS 435
Query: 87 TAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
+ + Y VT + + + AV GS+
Sbjct: 436 QFRVV-DYTDIRQIVTALCYRPDGKGAVVGSM 466
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLWN 42
+I ++F+ DG Y S G D +++WN
Sbjct: 259 SIVVMKFSHDGKYLASAGEDCVVRVWN 285
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 52.0 bits (119), Expect = 1e-07
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 46 DLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIK 105
D + ++ GH ++VLD + S S ++S+S+DK+V LWD+ T L+ + H+ VTC++
Sbjct: 509 DKPICSFTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDIETQSCLKLFAHN-DYVTCVQ 566
Query: 106 FNE-ESTMAVSGSVD 119
FN + +SGS+D
Sbjct: 567 FNPLDEDYFISGSLD 581
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQ 89
LS DK ++LW+ LK + + D + +S S+D + +W+++ Q
Sbjct: 534 LSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQ 593
Query: 90 PLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
+ + VT + + + A GS++
Sbjct: 594 VV-EWNDLKEMVTAVCYTPDGQAAFVGSIN 622
Score = 31.1 bits (67), Expect = 0.28
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 11 KCNQQAIRAVRFN-VDGTYCLSCGADKKIKLWNPHRDLMLKTYG-GHANEVLDAAGSCDS 68
K + I A +F+ ++ + L AD +I++ + +L+ K G + N + A+ + D+
Sbjct: 648 KAQAKKITAFQFSPINPSEVLVTSADSRIRVLDG-TELVQKFRGFKNMNSQMTASYTVDA 706
Query: 69 SHIVSASVDKSVILW 83
HIV AS D V +W
Sbjct: 707 KHIVCASEDSQVYVW 721
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 3 DLKTLTTIK--CNQQAIRAVRFN-VDGTYCLSCGADKKIKLWN 42
D++T + +K + + V+FN +D Y +S D KI++WN
Sbjct: 546 DIETQSCLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWN 588
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 52.0 bits (119), Expect = 1e-07
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+ V + DG + LS D +++LW+ + + + GH +VL A S D+ IVSAS
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR 125
Query: 77 DKSVILWDVTTAQPL---RRYRHHASSVTCIKF--NEESTMAVSGSVDNTV 122
D+++ LW+ H V+C++F N VS S D TV
Sbjct: 126 DRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 176
Score = 51.6 bits (118), Expect = 2e-07
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 10/128 (7%)
Query: 9 TIKCNQQAIRAVRFNVDGT-YCLSCGADKKIKLWNPHRDLMLKTYG-------GHANEVL 60
T++ + + A+ +D +S DK I LW +D K YG GH++ V
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDD--KAYGVAQRRLTGHSHFVE 67
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
D S D +S S D + LWD+ RR+ H V + F+ ++ VS S D
Sbjct: 68 DVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDR 127
Query: 121 TVASPGTL 128
T+ TL
Sbjct: 128 TIKLWNTL 135
Score = 41.9 bits (94), Expect = 2e-04
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLM--LKTYG-GHANEVLDAAGSCDSSH--I 71
+ +V F++D +S D+ IKLWN + + G GH + V S ++ I
Sbjct: 108 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 167
Query: 72 VSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
VSAS DK+V +W+++ + H V+ + + + ++ SG D V
Sbjct: 168 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 218
Score = 41.1 bits (92), Expect = 3e-04
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQ 89
+S DK +K+WN + T GH V A S D S S D V+LWD+ +
Sbjct: 168 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 227
Query: 90 PLRRYRHHASSV 101
L Y A+SV
Sbjct: 228 KL--YSLEANSV 237
Score = 33.9 bits (74), Expect = 0.040
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVL 60
+ + K +T+ + + V + DG+ C S G D + LW+ K Y AN V+
Sbjct: 181 LSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG--KKLYSLEANSVI 238
Query: 61 DAAGSCDSSHIVSASVDKSVILWDV 85
A + + + A+ + + +WD+
Sbjct: 239 HALCFSPNRYWLCAATEHGIKIWDL 263
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 51.2 bits (117), Expect = 2e-07
Identities = 31/104 (29%), Positives = 49/104 (47%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSAS 75
A+ A+R+N G+ S D I LW+ + L GH ++V D +VS+S
Sbjct: 108 AVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSS 167
Query: 76 VDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
DK + +WD+ T ++ H S V + + E V+GS D
Sbjct: 168 KDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSAD 211
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/86 (30%), Positives = 36/86 (41%)
Query: 34 ADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRR 93
AD I++W+ + + H V + S + S S D +ILWDV L R
Sbjct: 84 ADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFR 143
Query: 94 YRHHASSVTCIKFNEESTMAVSGSVD 119
R H VT + F + VS S D
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKD 169
Score = 43.6 bits (98), Expect = 5e-05
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 20 VRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTY------GGHANEVLDAAGSCDSSHIVS 73
+ ++ G Y L+ A +K+ +W+ + + KT GG + V A S SS +
Sbjct: 24 IAYDSTGKYVLA-PALEKVGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSA-SSLVAV 81
Query: 74 ASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D S+ +WD + H +VT +++N+ +M SGS DN +
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDI 130
Score = 42.7 bits (96), Expect = 9e-05
Identities = 24/122 (19%), Positives = 51/122 (41%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVL 60
M LK ++ ++ + + + DG ++ DK +K+W K+ H + V+
Sbjct: 569 MDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVM 628
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
++ ++ S D+ V WD + L H + + C+ + V+GS D
Sbjct: 629 GVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDR 688
Query: 121 TV 122
++
Sbjct: 689 SM 690
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDS 68
+I + ++ V+F + Y S G D+ +K W+ + L T GH E+ A S
Sbjct: 619 SIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRG 678
Query: 69 SHIVSASVDKSVILWD 84
+V+ S D+S+ WD
Sbjct: 679 DFLVTGSHDRSMRRWD 694
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/60 (21%), Positives = 28/60 (46%)
Query: 26 GTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDV 85
G +S DK +++W+ ++ GH +EV + ++V+ S D+ + + V
Sbjct: 160 GKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAV 219
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 51.2 bits (117), Expect = 2e-07
Identities = 30/114 (26%), Positives = 49/114 (42%)
Query: 6 TLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGS 65
T T K +++++ A+ N GT +S G +K +++W+P GH + V
Sbjct: 205 TPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLD 264
Query: 66 CDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
+S S D + LWD+ + L Y H SV + N + SG D
Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRD 318
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+R + + G +CLS +D I+LW+ + L TY H + V A + SH+ S
Sbjct: 258 VRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGR 317
Query: 77 DKSVILWDVTTAQ 89
D+ + L D+ T +
Sbjct: 318 DQCLYLTDLATRE 330
Score = 34.3 bits (75), Expect = 0.030
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
GH V A + + +VS +K + +WD T + R H +V + +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 114 VSGSVDNTV 122
+SGS D+ +
Sbjct: 271 LSGSSDSMI 279
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 51.2 bits (117), Expect = 2e-07
Identities = 30/114 (26%), Positives = 49/114 (42%)
Query: 6 TLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGS 65
T T K +++++ A+ N GT +S G +K +++W+P GH + V
Sbjct: 205 TPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLD 264
Query: 66 CDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
+S S D + LWD+ + L Y H SV + N + SG D
Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRD 318
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+R + + G +CLS +D I+LW+ + L TY H + V A + SH+ S
Sbjct: 258 VRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGR 317
Query: 77 DKSVILWDVTTAQ 89
D+ + L D+ T +
Sbjct: 318 DQCLYLTDLATRE 330
Score = 34.3 bits (75), Expect = 0.030
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
GH V A + + +VS +K + +WD T + R H +V + +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 114 VSGSVDNTV 122
+SGS D+ +
Sbjct: 271 LSGSSDSMI 279
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 51.2 bits (117), Expect = 2e-07
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS 69
+K +++ + +R+N +G SC D +W L TY GH+ V S DSS
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 70 HIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTVASPGTLS 129
+++ S D++ LWDV + + L ++ A + + F+ +AV + D+ V + +
Sbjct: 93 RLITGSADQTAKLWDVKSGKELFTFKFGAPA-RSVDFSVGDHLAVI-TTDHFVGTSSAIH 150
Query: 130 V 130
V
Sbjct: 151 V 151
Score = 40.7 bits (91), Expect = 3e-04
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYG---GHANEVLDAAGSCDSSHIVSASVDKSVILWDVT 86
+S G D I++W+ +LK GH + + D SH ++ S DK+ LWD+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMR 250
Query: 87 TAQPLRRY 94
T ++ Y
Sbjct: 251 TLTLIKTY 258
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 50.8 bits (116), Expect = 3e-07
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
++ I+ + + F+ DG S G DKK+ +WN + T HA+ + D
Sbjct: 501 VSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRP 560
Query: 67 DSSHIVSASVDKSVILWDVT-TAQPLRRYRHHASSVTCIKFNEEST 111
+S+ + ++S DK++ +WD + LR HA+ V I F+ + T
Sbjct: 561 NSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKT 606
Score = 43.2 bits (97), Expect = 7e-05
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 56 ANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVS 115
A++V+ + S D + SA DK V +W++ T Q HA +T ++F ST +
Sbjct: 508 ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLAT 567
Query: 116 GSVDNTV 122
S D T+
Sbjct: 568 SSFDKTI 574
Score = 35.5 bits (78), Expect = 0.013
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN-PHRDLMLKTYGGHANEV 59
M L+ +T + + I VRF + T + DK IK+W+ L+T GHA V
Sbjct: 537 METLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPV 596
Query: 60 LDAAGSCDSSHIV-SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
+ + ++ S + + WD+ A +R + + T ++F + ++ +
Sbjct: 597 MSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVK---GASTQVRFQPRTGQFLAAAS 652
Query: 119 DNTVA 123
+NTV+
Sbjct: 653 ENTVS 657
Score = 31.5 bits (68), Expect = 0.21
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILW 83
L G + I+LWN + + T GH + A S + + SAS DKSV +W
Sbjct: 732 LVIGGYQAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 3e-07
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
++ I+ + + F+ DG S G DKK+ +WN + T HA+ + D
Sbjct: 503 VSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRP 562
Query: 67 DSSHIVSASVDKSVILWDVT-TAQPLRRYRHHASSVTCIKFNEEST 111
+S+ + ++S DK++ +WD + LR HA+ V I F+ + T
Sbjct: 563 NSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKT 608
Score = 43.2 bits (97), Expect = 7e-05
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 56 ANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVS 115
A++V+ + S D + SA DK V +W++ T Q HA +T ++F ST +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLAT 569
Query: 116 GSVDNTV 122
S D T+
Sbjct: 570 SSFDKTI 576
Score = 35.5 bits (78), Expect = 0.013
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN-PHRDLMLKTYGGHANEV 59
M L+ +T + + I VRF + T + DK IK+W+ L+T GHA V
Sbjct: 539 METLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPV 598
Query: 60 LDAAGSCDSSHIV-SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
+ + ++ S + + WD+ A +R + + T ++F + ++ +
Sbjct: 599 MSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVK---GASTQVRFQPRTGQFLAAAS 654
Query: 119 DNTVA 123
+NTV+
Sbjct: 655 ENTVS 659
Score = 31.5 bits (68), Expect = 0.21
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILW 83
L G + I+LWN + + T GH + A S + + SAS DKSV +W
Sbjct: 734 LVIGGYQAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 3e-07
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
++ I+ + + F+ DG S G DKK+ +WN + T HA+ + D
Sbjct: 503 VSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRP 562
Query: 67 DSSHIVSASVDKSVILWDVT-TAQPLRRYRHHASSVTCIKFNEEST 111
+S+ + ++S DK++ +WD + LR HA+ V I F+ + T
Sbjct: 563 NSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKT 608
Score = 43.2 bits (97), Expect = 7e-05
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 56 ANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVS 115
A++V+ + S D + SA DK V +W++ T Q HA +T ++F ST +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLAT 569
Query: 116 GSVDNTV 122
S D T+
Sbjct: 570 SSFDKTI 576
Score = 35.5 bits (78), Expect = 0.013
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN-PHRDLMLKTYGGHANEV 59
M L+ +T + + I VRF + T + DK IK+W+ L+T GHA V
Sbjct: 539 METLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPV 598
Query: 60 LDAAGSCDSSHIV-SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
+ + ++ S + + WD+ A +R + + T ++F + ++ +
Sbjct: 599 MSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVK---GASTQVRFQPRTGQFLAAAS 654
Query: 119 DNTVA 123
+NTV+
Sbjct: 655 ENTVS 659
Score = 31.5 bits (68), Expect = 0.21
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILW 83
L G + I+LWN + + T GH + A S + + SAS DKSV +W
Sbjct: 734 LVIGGYQAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 3e-07
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
++ I+ + + F+ DG S G DKK+ +WN + T HA+ + D
Sbjct: 503 VSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRP 562
Query: 67 DSSHIVSASVDKSVILWDVT-TAQPLRRYRHHASSVTCIKFNEEST 111
+S+ + ++S DK++ +WD + LR HA+ V I F+ + T
Sbjct: 563 NSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKT 608
Score = 43.2 bits (97), Expect = 7e-05
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 56 ANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVS 115
A++V+ + S D + SA DK V +W++ T Q HA +T ++F ST +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLAT 569
Query: 116 GSVDNTV 122
S D T+
Sbjct: 570 SSFDKTI 576
Score = 35.5 bits (78), Expect = 0.013
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN-PHRDLMLKTYGGHANEV 59
M L+ +T + + I VRF + T + DK IK+W+ L+T GHA V
Sbjct: 539 METLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPV 598
Query: 60 LDAAGSCDSSHIV-SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
+ + ++ S + + WD+ A +R + + T ++F + ++ +
Sbjct: 599 MSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVK---GASTQVRFQPRTGQFLAAAS 654
Query: 119 DNTVA 123
+NTV+
Sbjct: 655 ENTVS 659
Score = 31.5 bits (68), Expect = 0.21
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILW 83
L G + I+LWN + + T GH + A S + + SAS DKSV +W
Sbjct: 734 LVIGGYQAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 3e-07
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
++ I+ + + F+ DG S G DKK+ +WN + T HA+ + D
Sbjct: 503 VSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRP 562
Query: 67 DSSHIVSASVDKSVILWDVT-TAQPLRRYRHHASSVTCIKFNEEST 111
+S+ + ++S DK++ +WD + LR HA+ V I F+ + T
Sbjct: 563 NSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKT 608
Score = 43.2 bits (97), Expect = 7e-05
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 56 ANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVS 115
A++V+ + S D + SA DK V +W++ T Q HA +T ++F ST +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLAT 569
Query: 116 GSVDNTV 122
S D T+
Sbjct: 570 SSFDKTI 576
Score = 35.5 bits (78), Expect = 0.013
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN-PHRDLMLKTYGGHANEV 59
M L+ +T + + I VRF + T + DK IK+W+ L+T GHA V
Sbjct: 539 METLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPV 598
Query: 60 LDAAGSCDSSHIV-SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
+ + ++ S + + WD+ A +R + + T ++F + ++ +
Sbjct: 599 MSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVK---GASTQVRFQPRTGQFLAAAS 654
Query: 119 DNTVA 123
+NTV+
Sbjct: 655 ENTVS 659
Score = 31.5 bits (68), Expect = 0.21
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILW 83
L G + I+LWN + + T GH + A S + + SAS DKSV +W
Sbjct: 734 LVIGGYQAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 50.8 bits (116), Expect = 3e-07
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 9 TIKCNQQA-IRAVRFNVDGTYCLSCGADKKIKLWNP-----HRDLMLK---TYGGHANEV 59
TIK +++ RF+ DG + S D I++W+ +DL + ++ H + V
Sbjct: 207 TIKFGKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPV 266
Query: 60 LDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
L S DS + S S D + +W + T +RR+ H+ VT + F+ + + +S S D
Sbjct: 267 LCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFD 326
Query: 120 NTVASPGTLS 129
T G S
Sbjct: 327 QTARIHGLKS 336
Score = 50.0 bits (114), Expect = 6e-07
Identities = 26/106 (24%), Positives = 50/106 (47%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+ + F+ D S D KIK+W + ++ + H+ V + S D S ++S S
Sbjct: 266 VLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSF 325
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D++ + + + + L+ +R H S V F + + ++ S D TV
Sbjct: 326 DQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTV 371
Score = 47.2 bits (107), Expect = 4e-06
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
+ Q + ++ F+ DG+ LS D+ ++ +LK + GH + V A + D S I+
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 73 SASVDKSVILWDVTTAQPLRRYR 95
+AS D +V +WD T L+ ++
Sbjct: 364 TASSDCTVKVWDSKTTDCLQTFK 386
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 50.4 bits (115), Expect = 4e-07
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 55 HANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAV 114
H+ E L A S D ++ + VD+ V +WDV T + ++ + H ++V+C+ F ++
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELY 280
Query: 115 SGSVDNTV 122
SGS D TV
Sbjct: 281 SGSFDRTV 288
Score = 39.9 bits (89), Expect = 6e-04
Identities = 20/86 (23%), Positives = 38/86 (44%)
Query: 19 AVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDK 78
A+ + DG Y + G D+ + +W+ ++ + GH N V +S + S S D+
Sbjct: 227 ALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDR 286
Query: 79 SVILWDVTTAQPLRRYRHHASSVTCI 104
+V +W+V + H + I
Sbjct: 287 TVKVWNVEDKAFITENHGHQGEILAI 312
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 55 HANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQ 89
H V+ A S D S SAS D +++ WDV++ +
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGK 194
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 50.4 bits (115), Expect = 4e-07
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 28 YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTT 87
Y + +DK +K+WN + K GH V D S D +V+AS D + LW +
Sbjct: 225 YLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPA 284
Query: 88 AQPLRRYR-HHASSVTC 103
+ ++ Y+ HH ++V C
Sbjct: 285 GKEVKVYQGHHKATVCC 301
Score = 39.5 bits (88), Expect = 8e-04
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW--NPHRDLMLKTYGGHANEVLDAAGSC 66
TI+ + + D Y L+ + I+L+ N + + TY H N V+ C
Sbjct: 30 TIQYPDSHVNRLEITPDKHY-LAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQC 88
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D+ + S S D +V +WD+ + Y ++V + + T +SG + +
Sbjct: 89 DAKWMYSGSEDGTVKIWDLRAPGCQKEY-ESVAAVNTVVLHPNQTELISGDQNGNI 143
Score = 29.5 bits (63), Expect = 0.86
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 22 FNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGH 55
F+VDG + ++ +D +LW+ +K Y GH
Sbjct: 261 FSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 50.4 bits (115), Expect = 4e-07
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLK--TYGGHANEVL 60
D K ++TI + A+ DGT + G D K+ L++ + D + + H +
Sbjct: 437 DGKVVSTINLGF-IVTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAIS 495
Query: 61 DAAGSCDSSHIVSASVDKSVILWD-VTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
S D S SA +++ ++WD V+ L+ +H++ + C+ ++ STM +GS+D
Sbjct: 496 VIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLD 555
Query: 120 NTV 122
V
Sbjct: 556 TCV 558
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHR-DLM--LKTYGGHANEVLDAAGSCDSSHIVS 73
+ VRF DG+ ++ +DKK +++ +++ L + GH + + S D +++
Sbjct: 190 VNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLT 249
Query: 74 ASVDKSVILWDVT 86
S DKS +WD++
Sbjct: 250 VSADKSAKIWDIS 262
Score = 28.7 bits (61), Expect = 1.5
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLW--NPHRDLMLKT---YGGHANEVLDAAGSC--DS 68
+I AV ++ DG L+ ADK K+W + + L T G + V D C +
Sbjct: 234 SIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGCLWQN 293
Query: 69 SHIVSASVDKSVILWDVT--TAQPLRRYRH--HASSVTCIKFNEESTMAVSGSVDNTV 122
HIV+ S+ ++ ++ + P + H + SS+ +K N + +SGS D +
Sbjct: 294 DHIVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNAD--YILSGSYDGLI 349
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 50.4 bits (115), Expect = 4e-07
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTM 112
GH +VLD A S DS+ ++SAS DK+V LW Q L + HH + VTC++FN
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVF-HHNNYVTCVEFNPVNKNN 327
Query: 113 AVSGSVD 119
SGS+D
Sbjct: 328 FASGSID 334
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 50.0 bits (114), Expect = 6e-07
Identities = 25/104 (24%), Positives = 51/104 (49%)
Query: 4 LKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA 63
++ + ++ ++ A+ + G Y ++ D+ +K+W+ L + GH ++ D A
Sbjct: 235 MQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLA 294
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFN 107
S ++ I SAS D + +W + P+ R H +VT I F+
Sbjct: 295 VSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFS 338
Score = 34.7 bits (76), Expect = 0.023
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 49 LKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE 108
+K GH N V A ++++ S D+ V +W + TA L R H +T + +
Sbjct: 238 IKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSS 297
Query: 109 ESTMAVSGSVD 119
+ S S D
Sbjct: 298 NNIFIASASND 308
Score = 33.1 bits (72), Expect = 0.070
Identities = 20/101 (19%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 15 QAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGH-ANEVLDAAGSCDSSHIVS 73
+ + + +++D + L+ D +I +WN ++ + GH A+ + + +S
Sbjct: 545 RGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMS 604
Query: 74 ASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAV 114
A D I+WD+ P++ Y + KF+ + T +
Sbjct: 605 AGYDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPDGTSII 645
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 49.6 bits (113), Expect = 7e-07
Identities = 23/114 (20%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS 69
I ++ ++ F + + G D+ +K+W+ + ++K+ G +LD A + D+
Sbjct: 227 IHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNK 286
Query: 70 HIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTMAVSGSVDNTV 122
+++A+ ++ +WDV++ + H V + ++ S VS + D T+
Sbjct: 287 SVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTI 340
Score = 42.7 bits (96), Expect = 9e-05
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 28 YCLSCGADKKIKLWNPHRDLMLKT--YGGHANEVLDAAGSCDSSHIVSASVDKSVILWDV 85
+ +S D+ IKLW+ H+ T + + N + S D + S +D ++ LWD+
Sbjct: 330 HVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAI---CLSIDGLTVFSGHMDGNLRLWDI 386
Query: 86 TTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
T + L H+S+VT + + ++ DN
Sbjct: 387 QTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDN 421
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 25 DGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS-HIVSASVDKSVILW 83
D ++ + + +W+ + T GH ++V S SS H+VSA+ D+++ LW
Sbjct: 284 DNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLW 343
Query: 84 DV 85
D+
Sbjct: 344 DL 345
Score = 31.9 bits (69), Expect = 0.16
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
L T CN A+ ++DG S D ++LW+ +L GH++ V + S
Sbjct: 355 LFTSNCN-----AICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSR 409
Query: 67 DSSHIVSASVDKSVILWDVTTAQ 89
+ + I+++ D ++D T +
Sbjct: 410 NGNRILTSGRDNVHNVFDTRTLE 432
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/107 (18%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDA-A 63
K L+ + + A+ +V + +G L+ G D +++ + T N + +
Sbjct: 390 KLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWS 449
Query: 64 GSC---DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFN 107
SC D ++ + S D SV +W ++ + + S + C ++
Sbjct: 450 RSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWS 496
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 48.8 bits (111), Expect = 1e-06
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 31 SCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQP 90
S D +KLW+ ML ++ GH V A S + +I S S+DKS+ +W + +
Sbjct: 516 SASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKI 575
Query: 91 LRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
++ Y + + + +N+E + DN+V
Sbjct: 576 VKTYTGN-GGIFEVCWNKEGNKIAACFADNSV 606
Score = 48.0 bits (109), Expect = 2e-06
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 9/131 (6%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVL 60
+G+ + T +Q + V+++ G+ SC D K+WN + + H E+
Sbjct: 435 IGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIY 494
Query: 61 D------AAGSCDSSH---IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEEST 111
G+ + + + SAS D +V LWD + L + H V + F+
Sbjct: 495 TIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGE 554
Query: 112 MAVSGSVDNTV 122
SGS+D ++
Sbjct: 555 YIASGSLDKSI 565
Score = 45.6 bits (103), Expect = 1e-05
Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
++T+ ++ I ++++N G Y L+ D+ +W+ + + + H+ LD
Sbjct: 358 ISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRN 417
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
+ S S S D + L + +P + + H V C+K++ ++ S S D+T
Sbjct: 418 NVSFATS-STDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDST 471
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/114 (18%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 11 KCNQQA--IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDS 68
K N+++ + + +N +GT + D + ++W + +L + T H + +
Sbjct: 319 KSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGEL-ISTLSKHKGPIFSLKWNKKG 377
Query: 69 SHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
++++ SVD++ ++WDV + +++ H+ + + + A S S D+ +
Sbjct: 378 DYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATS-STDSMI 430
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
K L + +++ + ++ F+ +G Y S DK I +W+ ++KTY G+ + +
Sbjct: 532 KMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGG-IFEVCW 590
Query: 65 SCDSSHIVSASVDKSVILWD 84
+ + + I + D SV + D
Sbjct: 591 NKEGNKIAACFADNSVCVLD 610
Score = 29.5 bits (63), Expect = 0.86
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 50 KTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEE 109
KT+ GH EV S + S S D + +W++ + + R H + I+++
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPT 501
Query: 110 STMAVSGSVDNTVASPGTLSVV 131
+ + T+AS S V
Sbjct: 502 GPGTNNPNKQLTLASASFDSTV 523
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 48.8 bits (111), Expect = 1e-06
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW----NPHRDLMLKTYGGHANE 58
DL+ +IK + A+ A+ + +GT AD++I++W R ++ T H +
Sbjct: 224 DLRCKESIKAHDDAVNAIAVSTNGTVYTG-SADRRIRVWAKPTGEKRHTLVATLEKHKSA 282
Query: 59 VLDAAGSCDSSHIVSASVDKSVILW---DVTTAQPLR-RYRHHASSVTCIKFNEESTMAV 114
V A + D S + S S D+S+++W D + +R R H ++ + FN S + +
Sbjct: 283 VNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FN-VSDLLL 340
Query: 115 SGSVDNTV 122
SGS D TV
Sbjct: 341 SGSADRTV 348
Score = 30.3 bits (65), Expect = 0.49
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW-NPHRDLMLKTYG---GHANEVLDA 62
+ T++ ++ A+ A+ N DG+ S D+ I +W + G GH +L
Sbjct: 273 VATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL 332
Query: 63 AGSCDSSHIVSASVDKSVILW 83
D ++S S D++V +W
Sbjct: 333 FNVSDL--LLSGSADRTVRIW 351
Score = 28.3 bits (60), Expect = 2.0
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Query: 22 FNVDGTYCLSCGADKKIKLWNPHRDLM---LKTYGGHANEVLDAAGSCDSS-----HIVS 73
FNV LS AD+ +++W D L+ GH V A + I+S
Sbjct: 333 FNVSDLL-LSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIIS 391
Query: 74 ASVDKSVILWDVTTAQP 90
S+D V W V+ +P
Sbjct: 392 GSLDGEVKCWKVSVTKP 408
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 48.4 bits (110), Expect = 2e-06
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 49 LKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE 108
L + GH EVLD + S D+ +++SAS+DK+V LW V + L + H+ S VT ++FN
Sbjct: 321 LYEFRGHTGEVLDISWSKDN-YLLSASMDKTVRLWKVGSNDCLGVFAHN-SYVTSVQFNP 378
Query: 109 -ESTMAVSGSVDNTV 122
+SGS+D V
Sbjct: 379 VNENYFMSGSIDGKV 393
Score = 30.7 bits (66), Expect = 0.37
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS 69
IK + AI A++F+ DG + S G D +++W D + NE+ SC
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDKKSRLRRDCLNEI---DPSCMYF 273
Query: 70 HIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKF 106
+ S K V++ + + +R + S C+ F
Sbjct: 274 EVNDLSQLKPVLVNEEKPKKTTESFRKTSDS-ACVVF 309
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 27 TYCLSCGADKKIKLWNPHRDLMLKTYGG--HANEVLDAAGSCDSSHIVSASVDKSVILW 83
T L AD K+++ + +++ Y G + A+ + D HIVSA D +V +W
Sbjct: 474 TKVLVVSADSKVRILQGNN--VVRKYKGVCKTRSLTSASLTSDGKHIVSACEDSNVYIW 530
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 48.4 bits (110), Expect = 2e-06
Identities = 18/60 (30%), Positives = 37/60 (61%)
Query: 63 AGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
A + + +++V + + LW+V T + L+++ H SVTC+ F+ + ++ VSGS D ++
Sbjct: 85 AANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSI 144
Score = 44.0 bits (99), Expect = 4e-05
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 15 QAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSA 74
+ I+A+ N +GTY + G I LW +LK + GH V S D S +VS
Sbjct: 79 EPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSG 138
Query: 75 SVDKSVILWDV 85
S D S+ +W +
Sbjct: 139 SQDGSIRVWSL 149
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 48.0 bits (109), Expect = 2e-06
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 14 QQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKT-YGGHANE---VLDAAGSCDSS 69
+Q I ++ + DG + + + ++I LW+ + + GH + G DSS
Sbjct: 397 EQPITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSS 456
Query: 70 HIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEES-TMAVSGSVDNTV 122
I S S D V +W++ +PL H+ +V C+ +N ++ M S S D T+
Sbjct: 457 FIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTI 510
Score = 41.5 bits (93), Expect = 2e-04
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHAN--EVLDAAGSC 66
T++ +Q + V ++ D T L+CG + +KLW+ ++ T+G + V A
Sbjct: 264 TLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFP 323
Query: 67 DSSHIVSASVD--KSVILWDVTTAQPLRRYR 95
DS+ +V S D + +++WD T ++ +R
Sbjct: 324 DSTRLVCGSSDPERGIVMWD-TDGNEIKAWR 353
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSH-I 71
++ IR+ +D ++ S D ++ +WN L+ GH+ V + + + +
Sbjct: 442 SKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRML 501
Query: 72 VSASVDKSVILW 83
SAS D+++ +W
Sbjct: 502 ASASDDQTIRIW 513
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 47.6 bits (108), Expect = 3e-06
Identities = 25/103 (24%), Positives = 44/103 (42%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVL 60
M + + L ++ + I + Y + +DK +K+WN + K GH V
Sbjct: 204 MTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVW 263
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTC 103
D S D ++V+AS D + LW + + Y+ H + C
Sbjct: 264 DCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVC 306
Score = 26.2 bits (55), Expect = 8.0
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 55 HANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAV 114
H + +L S + ++ +AS DK+V +W++ + + H V F+ + V
Sbjct: 216 HNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLV 275
Query: 115 SGSVDNT 121
+ S D T
Sbjct: 276 TASSDTT 282
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 47.2 bits (107), Expect = 4e-06
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTM 112
GH + +LD + S S ++S+S+DK+V LWD+ T L+ + H+ VTCI+F+ +
Sbjct: 504 GHLDAILDLSWS-KSQLLLSSSMDKTVRLWDIETKTCLKLFAHN-DYVTCIQFSPVDENY 561
Query: 113 AVSGSVD 119
+SGS+D
Sbjct: 562 FLSGSLD 568
Score = 29.9 bits (64), Expect = 0.65
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS 69
I+ ++ A+ ++F+ D Y S GAD+ I +W ++ G + + CDSS
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIHPSL--CDSS 457
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 3 DLKTLTTIK--CNQQAIRAVRFN-VDGTYCLSCGADKKIKLWN 42
D++T T +K + + ++F+ VD Y LS D KI++W+
Sbjct: 533 DIETKTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWS 575
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 46.8 bits (106), Expect = 5e-06
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
+ +++ + + F+ DG S G DKK LW T H + D S
Sbjct: 644 VNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSP 703
Query: 67 DSSHIVSASVDKSVILWDV-TTAQPLRRYRHHASSVTCIKFN 107
+ ++S DK+V +WD LR + H+S VT + F+
Sbjct: 704 SQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFH 745
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
S D + SA DK +LW T +P H + +T I+F+ + S D TV
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTV 717
Score = 32.7 bits (71), Expect = 0.092
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 4 LKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN-PHRDLMLKTYGGHANEV--L 60
+K TT++ + I +RF+ + DK +++W+ ++ L+T+ GH++ V L
Sbjct: 683 MKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSL 742
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSV 101
D D I S D + W + R Y+ ++ +
Sbjct: 743 DFHPIKDDL-ICSCDNDNEIRYWSINNGSCTRVYKGGSTQI 782
Score = 31.1 bits (67), Expect = 0.28
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS 69
+ CN ++ F+ L G + ++LWN + + T H + A S +
Sbjct: 858 LSCNGNKFQSCVFHPAYPSLLVIGCYQSLELWNMSENKTM-TLPAHEGLITSLAVSTATG 916
Query: 70 HIVSASVDKSVILW 83
+ SAS DK V LW
Sbjct: 917 LVASASHDKLVKLW 930
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 45.6 bits (103), Expect = 1e-05
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 46 DLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIK 105
D L + GH+ ++LD + S ++ ++SASVD SV LW + L + H+ + VT ++
Sbjct: 346 DKPLHEFLGHSGDILDISWS-KNNRLLSASVDNSVRLWQIGCEDCLGIFSHN-NYVTSVQ 403
Query: 106 FNE-ESTMAVSGSVDNTVA--SPGTLSVVD 132
FN + +SGS+D V S VVD
Sbjct: 404 FNPVDDDHFISGSIDGKVRIWSASQCQVVD 433
Score = 31.9 bits (69), Expect = 0.16
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRD 46
I+ ++ AI A++F+ DG Y S G D +++W+ D
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVED 283
Score = 31.9 bits (69), Expect = 0.16
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 23 NVDGTYCLSCGADKKIKLWNPHRDLMLKTYGG-HANEVLDAAGSCDSSHIVSASVDKSVI 81
+ D + + AD ++++ + R+++ K G +A + A+ + D HIVSA D SV
Sbjct: 502 STDPSRVMVASADSQVRIISG-RNVVHKYKGSRNAGNQISASFTADGKHIVSACDDSSVY 560
Query: 82 LWDVTTAQP 90
+W+ P
Sbjct: 561 VWNCVGHDP 569
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 45.6 bits (103), Expect = 1e-05
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 46 DLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIK 105
D L + GH+ ++LD + S ++ ++SASVD SV LW + L + H+ + VT ++
Sbjct: 346 DKPLHEFLGHSGDILDISWS-KNNRLLSASVDNSVRLWQIGCEDCLGIFSHN-NYVTSVQ 403
Query: 106 FNE-ESTMAVSGSVDNTVA--SPGTLSVVD 132
FN + +SGS+D V S VVD
Sbjct: 404 FNPVDDDHFISGSIDGKVRIWSASQCQVVD 433
Score = 32.3 bits (70), Expect = 0.12
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 11 KCNQQAIRAVRFN-VDGTYCLSCGADKKIKLWNPHRDLMLKTYGG-HANEVLDAAGSCDS 68
K + + I +F+ D + + AD ++++ + R+++ K G +A + A+ + D
Sbjct: 485 KSSNKRIIGFQFDSTDPSRVMVASADSQVRIISG-RNVVHKYKGSRNAGNQISASFTADG 543
Query: 69 SHIVSASVDKSVILWDVTTAQP 90
HIVSA D SV +W+ P
Sbjct: 544 KHIVSACDDSSVYVWNCVGHDP 565
Score = 31.9 bits (69), Expect = 0.16
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRD 46
I+ ++ AI A++F+ DG Y S G D +++W+ D
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVED 283
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 45.2 bits (102), Expect = 2e-05
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 17 IRAVRFNVDGTYCL-SCGADKKIKLWNPHRDLMLKTYGGHANEV--LDAAGSCDSSHIVS 73
+ V FN T S D+ IK+WN T H V +D D ++++
Sbjct: 145 VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLIT 204
Query: 74 ASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
S D + +WD T ++ H +V+ + F+ E + ++GS D TV
Sbjct: 205 GSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTV 253
Score = 33.5 bits (73), Expect = 0.053
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+R+ +F + ++ D I+++N + +K + HA+ + A +++S+S
Sbjct: 60 VRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSD 119
Query: 77 DKSVILWDVTTAQPLRR-YRHHASSVTCIKFNEESTMA-VSGSVDNTV 122
D + LWD + + H+ V + FN + T S S+D T+
Sbjct: 120 DMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTI 167
Score = 31.1 bits (67), Expect = 0.28
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 25 DGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD 84
D Y ++ D K+W+ ++T GH + V + + I++ S D +V +W
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Query: 85 VTT 87
TT
Sbjct: 258 ATT 260
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/80 (18%), Positives = 33/80 (41%)
Query: 40 LWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHAS 99
+WN M+K++ V A +V+ + D + +++ T ++ + HA
Sbjct: 41 IWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHAD 100
Query: 100 SVTCIKFNEESTMAVSGSVD 119
+ C+ + +S S D
Sbjct: 101 YIRCVAVHPTLPYVLSSSDD 120
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 44.8 bits (101), Expect = 2e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 17 IRAVRFNVDGTYCL-SCGADKKIKLWN---PHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
+ V FN T S D+ IK+WN P + L + N V G D +++
Sbjct: 145 VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG-DKPYLI 203
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ S D + +WD T ++ H +V+ + F+ E + ++GS D TV
Sbjct: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTV 253
Score = 36.7 bits (81), Expect = 0.006
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 9 TIKCNQQAIRAVRFNVDGT--YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
T+ +Q+ + V + G Y ++ D K+W+ ++T GH + V
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ I++ S D +V +W TT + + V I + + S V G + T+
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 44.4 bits (100), Expect = 3e-05
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 3 DLKTLTTI-KCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPH--RDLMLKTYGGHANEV 59
D K L +I K + AI A+ + DG + + ADKKIK+WN + ++ T H + V
Sbjct: 223 DFKCLDSIEKAHDDAINAIVVSKDG-FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAV 281
Query: 60 LDAAGSCDSSHIVSASVDKSVILWD 84
A S D + S + D+S+++W+
Sbjct: 282 NALAISEDGKVLYSGACDRSILVWE 306
Score = 36.3 bits (80), Expect = 0.007
Identities = 20/109 (18%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSAS 75
A+ ++ + DG+ S D+ K+W L + ++ ++A + + S
Sbjct: 194 AVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGS 253
Query: 76 VDKSVILWDVTTAQP--LRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
DK + +W+ + + H S+V + +E+ + SG+ D ++
Sbjct: 254 ADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSI 302
Score = 26.2 bits (55), Expect = 8.0
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 51 TYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRY-RHHASSVTCIKFNEE 109
T+ H + V A S D S + SAS D+S +W + + L + H ++ I +++
Sbjct: 187 TWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKD 246
Query: 110 STMAVSGSVDNTV 122
+GS D +
Sbjct: 247 G-FVYTGSADKKI 258
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 44.4 bits (100), Expect = 3e-05
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYC-LSCGADKKIKLWNPHRDLMLKTYGGHANEV 59
M D + + ++Q + FN G + C ++ +W+ + + GH +V
Sbjct: 293 MPDFICIHLLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDV 352
Query: 60 LDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
S DS + + + D V +W+V + + H ++VT + F ++ +S S+D
Sbjct: 353 NCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLD 412
Query: 120 NTV 122
TV
Sbjct: 413 GTV 415
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+ V ++ D + D K+K+WN T+ H N V D+ ++SAS+
Sbjct: 352 VNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASL 411
Query: 77 DKSVILWDVTTAQPLRRY 94
D +V WD + + Y
Sbjct: 412 DGTVRAWDFKRYKNYKTY 429
Score = 31.9 bits (69), Expect = 0.16
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSA- 74
A+ A+ F D LS D ++ W+ R KTY + + S +V A
Sbjct: 393 AVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAG 452
Query: 75 SVDK-SVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
++D + +W T Q H + V + F+ + + S S D TV
Sbjct: 453 TLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 501
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/86 (22%), Positives = 34/86 (39%)
Query: 37 KIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRH 96
+I +W+ + GH V S + + S+S D +V LWDV ++
Sbjct: 458 EIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFR 517
Query: 97 HASSVTCIKFNEESTMAVSGSVDNTV 122
H V + F + S ++D +
Sbjct: 518 HNHDVLTVAFRPDGKQLASSTLDGQI 543
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPLRRYR--HHASSVTCIKFNEESTMAVSGSVD 119
S D +I++A + + ++D+ LRR++ H+ S + F M +G +D
Sbjct: 590 SADGGYILAAGTSRYICMYDIADQVLLRRFQISHNLSLDGVLDFLHSKKMTEAGPID 646
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 44.4 bits (100), Expect = 3e-05
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYC-LSCGADKKIKLWNPHRDLMLKTYGGHANEV 59
M D + + ++Q + FN G + C ++ +W+ + + GH +V
Sbjct: 333 MPDFICIHLLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDV 392
Query: 60 LDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
S DS + + + D V +W+V + + H ++VT + F ++ +S S+D
Sbjct: 393 NCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLD 452
Query: 120 NTV 122
TV
Sbjct: 453 GTV 455
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+ V ++ D + D K+K+WN T+ H N V D+ ++SAS+
Sbjct: 392 VNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASL 451
Query: 77 DKSVILWDVTTAQPLRRY 94
D +V WD + + Y
Sbjct: 452 DGTVRAWDFKRYKNYKTY 469
Score = 31.9 bits (69), Expect = 0.16
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSA- 74
A+ A+ F D LS D ++ W+ R KTY + + S +V A
Sbjct: 433 AVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAG 492
Query: 75 SVDK-SVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
++D + +W T Q H + V + F+ + + S S D TV
Sbjct: 493 TLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 541
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/86 (22%), Positives = 34/86 (39%)
Query: 37 KIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRH 96
+I +W+ + GH V S + + S+S D +V LWDV ++
Sbjct: 498 EIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFR 557
Query: 97 HASSVTCIKFNEESTMAVSGSVDNTV 122
H V + F + S ++D +
Sbjct: 558 HNHDVLTVAFRPDGKQLASSTLDGQI 583
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPLRRYR--HHASSVTCIKFNEESTMAVSGSVD 119
S D +I++A + + ++D+ LRR++ H+ S + F M +G +D
Sbjct: 630 SADGGYILAAGTSRYICMYDIADQVLLRRFQISHNLSLDGVLDFLHSKKMTEAGPID 686
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 44.0 bits (99), Expect = 4e-05
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 16 AIRAVRFNVDGTYCLSCGADK-KIKLWNPHRD------LMLKTYGGHANEVLDAAGSCDS 68
A+ +RF+ G L+ GAD ++ +W H + K+ H +VLD S D
Sbjct: 66 AVNTIRFSPSGEL-LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDD 124
Query: 69 SHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
++++S SVD S I+WDV + H V + ++ + S S D T
Sbjct: 125 AYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRT 177
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 44.0 bits (99), Expect = 4e-05
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 16 AIRAVRFNVDGTYCLSCGADK-KIKLWNPHRD------LMLKTYGGHANEVLDAAGSCDS 68
A+ +RF+ G L+ GAD ++ +W H + K+ H +VLD S D
Sbjct: 66 AVNTIRFSPSGEL-LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDD 124
Query: 69 SHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
++++S SVD S I+WDV + H V + ++ + S S D T
Sbjct: 125 AYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRT 177
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 43.6 bits (98), Expect = 5e-05
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 53 GGHANEVLDAAGSCDSSHIV-SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEES- 110
G H VL A + + +I+ SAS DK V +WDV T HH V + +N +
Sbjct: 262 GSHTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAP 321
Query: 111 TMAVSGSVDNTV 122
+ +SGS D TV
Sbjct: 322 EVLLSGSFDQTV 333
Score = 29.5 bits (63), Expect = 0.86
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 71 IVSASVDKSVILWDVTTAQP--LRRYRHHASSVTCIKFNEES--TMAVSGS 117
+ + S+DKSV LWD++ +P + ++ +A +V I F ++ +A+ GS
Sbjct: 420 LATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGS 470
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 31 SCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHI-VSASVDKSVILWD 84
S ADKK+K+W+ T H EV A + + + +S S D++V++ D
Sbjct: 283 SASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVMKD 337
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 43.6 bits (98), Expect = 5e-05
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 53 GGHANEVLDAAGSCDSSHIV-SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEES- 110
G H VL A + + +I+ SAS DK V +WDV T HH V + +N +
Sbjct: 230 GSHTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAP 289
Query: 111 TMAVSGSVDNTV 122
+ +SGS D TV
Sbjct: 290 EVLLSGSFDQTV 301
Score = 29.9 bits (64), Expect = 0.65
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 31 SCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHI-VSASVDKSVILWD 84
S ADKK+K+W+ T H EV A + + + +S S D++V+L D
Sbjct: 251 SASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKD 305
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 43.2 bits (97), Expect = 7e-05
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 14 QQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRD-LMLKTYGGHANE---VLDAAGSCDSS 69
+ I + + D Y L +++I+LWN D ++ Y GH + G +
Sbjct: 443 EDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQA 502
Query: 70 HIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEEST-MAVSGSVDNTV 122
I S S D V +W +T + + HA +V C+ ++ + M S S D T+
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTI 556
Score = 36.7 bits (81), Expect = 0.006
Identities = 22/122 (18%), Positives = 50/122 (40%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLD 61
G + T+ + + + A+ ++ D L+CGA++ I+ W+ + Y +
Sbjct: 307 GHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPIS 366
Query: 62 AAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
D I++ D+S+ +WD+ + V+ I ++ VS D+
Sbjct: 367 CGWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSV 426
Query: 122 VA 123
++
Sbjct: 427 IS 428
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 43.2 bits (97), Expect = 7e-05
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW--NPHRDLMLKTYG---GHAN 57
D ++++ ++ ++ +++V +N G+ +CG DK + +W P D T GH+
Sbjct: 81 DSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSE 140
Query: 58 EVLDAAGSCDSSHIVSASVDKSVILW-------DVTTAQPLRRYRH-HASSVTCIKFNEE 109
+V + S S D ++ +W D Q L + H+S+V I FN
Sbjct: 141 DVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAA 200
Query: 110 STMAVSGSVDNTV 122
V+ S D V
Sbjct: 201 GDKMVTCSDDLAV 213
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 43.2 bits (97), Expect = 7e-05
Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 5 KTLTTIKCNQQAIRAVRFN-VDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA 63
K L ++ + +R++ F+ VD S D + + + +L + GH + VL
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVD 250
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTVA 123
S D I + S D++V LWD+ ++ +H V + F V +V+
Sbjct: 251 ASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRLASVS 310
Query: 124 SPGTLSVVDKS 134
++S+ D S
Sbjct: 311 DDKSVSLYDYS 321
Score = 37.1 bits (82), Expect = 0.004
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQ 89
L+ D+ +KLW P +++T GH+ V A S+S+D V ++DV T
Sbjct: 34 LTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNA 93
Query: 90 PLRRYRHHASSVTCIKFNEEST-MAVSGSVDNTV 122
+ S V ++F + T +AV+G +V
Sbjct: 94 TIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASV 127
Score = 27.1 bits (57), Expect = 4.6
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+++ S+D++V LW +R H+ V + + +A S S+D+ V
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFV 84
Score = 26.2 bits (55), Expect = 8.0
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 59 VLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTMAVSGS 117
VL A S + + S+D ++ ++DV ++ L + H V + F+ + + SGS
Sbjct: 161 VLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGS 220
Query: 118 VDNTV 122
D V
Sbjct: 221 DDGHV 225
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 43.2 bits (97), Expect = 7e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 17 IRAVRFNVDGTYCL-SCGADKKIKLWN---PHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
+ V FN T S D+ IK+WN P + L + N V G D +++
Sbjct: 145 VMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG-DKPYLI 203
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ S D + +WD T ++ H +V+ + F+ E + ++GS D TV
Sbjct: 204 TGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTV 253
Score = 37.1 bits (82), Expect = 0.004
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 9 TIKCNQQAIRAVRFNVDGT--YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
T+ +Q+ + V + G Y ++ D K+W+ ++T GH + V
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ I++ S D +V +W TT + + V I + + S V G + T+
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 43.2 bits (97), Expect = 7e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 17 IRAVRFNVDGTYCL-SCGADKKIKLWN---PHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
+ V FN T S D+ IK+WN P + L + N V G D +++
Sbjct: 145 VMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG-DKPYLI 203
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ S D + +WD T ++ H +V+ + F+ E + ++GS D TV
Sbjct: 204 TGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTV 253
Score = 37.1 bits (82), Expect = 0.004
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 9 TIKCNQQAIRAVRFNVDGT--YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
T+ +Q+ + V + G Y ++ D K+W+ ++T GH + V
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ I++ S D +V +W TT + + V I + + S V G + T+
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 43.2 bits (97), Expect = 7e-05
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 17 IRAVRFNVDGTYCL-SCGADKKIKLWN---PHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
+ V FN T S D+ IK+WN P + L + N V G D +++
Sbjct: 145 VMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG-DKPYLI 203
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ S D + +WD T ++ H +V+ + F+ E + ++GS D TV
Sbjct: 204 TGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTV 253
Score = 37.1 bits (82), Expect = 0.004
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 9 TIKCNQQAIRAVRFNVDGT--YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
T+ +Q+ + V + G Y ++ D K+W+ ++T GH + V
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ I++ S D +V +W TT + + V I + + S V G + T+
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 43.2 bits (97), Expect = 7e-05
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW------NPHRDLMLKTYGGH 55
GDL + + C A+ F+ +G + G +KKIK++ N +RD+
Sbjct: 528 GDLLNSSNLVC------ALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELA 581
Query: 56 ANEVLDAA--GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTM 112
L + S S I S++ D V +WDV +Q + + H V I + + T+
Sbjct: 582 GRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTL 641
Query: 113 AVSGSVDNTVASPGTL 128
SGS D T S GT+
Sbjct: 642 LASGSDDGTGVSIGTI 657
Score = 32.7 bits (71), Expect = 0.092
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 6 TLTTIKCNQQAIRAVRFNVDGTYCLSCG-ADKKIKLWNPHRD-LMLKTYGGHANEVLDAA 63
++ TIK + V+F D L+ G AD K+ ++ + L T GH+ V
Sbjct: 653 SIGTIKTKAN-VCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTV-SYV 710
Query: 64 GSCDSSHIVSASVDKSVILWDVTTA------QPLRRYRHHASSVTCIKFNEESTMAVSGS 117
DSS +VS+S D ++ LWD++ + PL + H + + + +GS
Sbjct: 711 KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIATGS 770
Query: 118 VDNTV 122
N V
Sbjct: 771 ETNEV 775
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 42.7 bits (96), Expect = 9e-05
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTMAVSGSVD 119
+ +HI S+ + V +WDVTT Q L Y H + F+ E +M VSGS D
Sbjct: 432 EKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 485
Score = 37.9 bits (84), Expect = 0.002
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Query: 17 IRAVRFNVDGTYCLSCG-ADKKIKLWNPHR-DLMLKTYGGHANEVLDAAGSCDSSHIVSA 74
I V++N + ++ G AD I ++ L + GH V ++ + SA
Sbjct: 508 ICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAV-SYVKFLSNNELASA 566
Query: 75 SVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
S D ++ LWDV P+R +R H + + S GS N V
Sbjct: 567 STDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEV 614
Score = 35.5 bits (78), Expect = 0.013
Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
+++A+ V+F + S D ++LW+ +L ++T+ GH NE + +S ++
Sbjct: 548 HKKAVSYVKF-LSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLA 606
Query: 73 SASVDKSVILWDVTTAQPLRRYR 95
S V ++ +P+ +R
Sbjct: 607 CGSETNEVYVYHKEITRPVTSHR 629
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 14 QQAIRAVRFNVDGT-YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
++ + A+ F+ G+ Y S G + +K+W+ R L +K GH + + +C H+
Sbjct: 92 EECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLA 151
Query: 73 SASVDKSVILWDVTT 87
S SV +I+ ++ +
Sbjct: 152 SVSVGGDLIVHNLAS 166
Score = 40.7 bits (91), Expect = 3e-04
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLML------KTYGGHANEVLDAAGSCD-- 67
A+ +V++N S G DKKI LW + + K G A E L A
Sbjct: 45 AVNSVKWNHTNLVVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKG 104
Query: 68 SSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
S +I S + V +WD+ +++ + H S++T + +N + S SV
Sbjct: 105 SRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSV 155
Score = 27.5 bits (58), Expect = 3.5
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 10 IKCNQQAIRAVRFNVDGTYC--LSCGADKKI-KLWNPHRDLMLKTYGGHANEVLDAAGSC 66
+K + I V +N + +S G D + L + R LK G +LD + S
Sbjct: 131 LKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRS- 189
Query: 67 DSSHI-VSASVDKSVILWDVTTAQPLRRY-RHHASSVTCIKFNEESTMAVS 115
S H+ V+A D +V LWD T P + + H++ + F+ + ++
Sbjct: 190 -SRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIA 239
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 42.3 bits (95), Expect = 1e-04
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 28 YCLSCGADKKIKLWNPH---RDLMLKT---YGGHANEVLDAAGSCDSSHIV-SASVDKSV 80
Y LS D+KI LW+ +D +L Y GH + + D + + ++ SA D +
Sbjct: 183 YLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRL 242
Query: 81 ILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTMAVSGSVDNTVA 123
++WD T Q + + H V + FN + + S D+TVA
Sbjct: 243 VIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVA 286
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 41.5 bits (93), Expect = 2e-04
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTY-GGHANEVL 60
G L TI + + ++ + DG + + +++LW+ + L+T GGH + V
Sbjct: 170 GSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVG 229
Query: 61 DAAGSCDSSHIVSAS-VDKSVILWDVTTAQPL-RRYRHHASSVTCIKFNEESTMAVSGSV 118
A + +HI++ +D +I DV P+ YR H V +K++ SG
Sbjct: 230 SLAWN---NHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGN 286
Query: 119 DNTV 122
DN V
Sbjct: 287 DNVV 290
Score = 31.9 bits (69), Expect = 0.16
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Query: 45 RDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD------VTTAQPLRRYRHHA 98
R +++TY GH EV S + S D V +WD +T Q L R H
Sbjct: 255 RSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHT 314
Query: 99 SSVTCI 104
S+V +
Sbjct: 315 SAVKAL 320
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 37 KIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDV 85
++ LW + + GH + VL A S D + SA+ D+++ W+V
Sbjct: 383 QLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 27.5 bits (58), Expect = 3.5
Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Query: 33 GADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSAS--VDKSVILWDVTTAQP 90
G D+ IK WN H L + ++V S + ++S+ + LW +
Sbjct: 336 GGDRTIKFWNTHTGACLNSV-DTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVK 394
Query: 91 LRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ H S V + + + S + D T+
Sbjct: 395 MAELTGHTSRVLYMAQSPDGCTVASAAGDETL 426
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 41.5 bits (93), Expect = 2e-04
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTY-GGHANEVL 60
G L TI + + ++ + DG + + +++LW+ + L+T GGH + V
Sbjct: 160 GSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVG 219
Query: 61 DAAGSCDSSHIVSAS-VDKSVILWDVTTAQPL-RRYRHHASSVTCIKFNEESTMAVSGSV 118
A + +HI++ +D +I DV P+ YR H V +K++ SG
Sbjct: 220 SLAWN---NHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGN 276
Query: 119 DNTV 122
DN V
Sbjct: 277 DNVV 280
Score = 31.9 bits (69), Expect = 0.16
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Query: 45 RDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD------VTTAQPLRRYRHHA 98
R +++TY GH EV S + S D V +WD +T Q L R H
Sbjct: 245 RSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHT 304
Query: 99 SSVTCI 104
S+V +
Sbjct: 305 SAVKAL 310
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 37 KIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDV 85
++ LW + + GH + VL A S D + SA+ D+++ W+V
Sbjct: 373 QLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 27.5 bits (58), Expect = 3.5
Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Query: 33 GADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSAS--VDKSVILWDVTTAQP 90
G D+ IK WN H L + ++V S + ++S+ + LW +
Sbjct: 326 GGDRTIKFWNTHTGACLNSV-DTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVK 384
Query: 91 LRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ H S V + + + S + D T+
Sbjct: 385 MAELTGHTSRVLYMAQSPDGCTVASAAGDETL 416
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 40.7 bits (91), Expect = 3e-04
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 25 DGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD 84
DG + +S D + L N + T+ GH V + ++ SAS D S LWD
Sbjct: 30 DGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 85 VTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
T L + H C F++++ ++G +
Sbjct: 90 ALTGDVLHSFEHKHIVRAC-AFSQDTKYLITGGFE 123
Score = 36.3 bits (80), Expect = 0.007
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
K + T++ + + + + DG Y ++ +K W+ + ++K+Y N +
Sbjct: 179 KIVQTLE-TKSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYDMPCNIESASLE 236
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ V+ D V L+D T + + + H V C++F SGS D T+
Sbjct: 237 PKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTI 294
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 40.3 bits (90), Expect = 5e-04
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWN--PH-----RDLMLKTYGGHANEVLDAAGS 65
+++ + +V +N +GT S D+ ++WN PH +DL LK GH + V
Sbjct: 19 HKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELK---GHTDSVDQLCWD 75
Query: 66 CDSSHIV-SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
S +V +AS DKSV LWD + + ++ ++ I + + T G+ D+
Sbjct: 76 PKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENIN-ITYKPDGTHVAVGNRDD 130
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 43 PHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDV 85
P + L + Y GH +V A + + + + S SVD++ +W++
Sbjct: 7 PFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNI 49
Score = 30.7 bits (66), Expect = 0.37
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 4 LKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA 63
LK L T+ + + + G Y AD + LW+ L L+T+ V +
Sbjct: 181 LKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTIS 240
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEE-STMAVSGSVDN 120
+ +I SAS D + + +V T + + + A ++ +++N + + +A +G N
Sbjct: 241 FNYSGEYIASASEDLFIDIANVQTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKN 297
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 92 RRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
R Y+ H V + +N T SGSVD T
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQT 43
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 40.3 bits (90), Expect = 5e-04
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 28 YCLSCGADKKIKLWNPHR---DLMLK---TYGGHANEVLDAAGSCDSSHIV-SASVDKSV 80
Y LS D++I LW+ D +L Y GH + + D A + +I SA D +
Sbjct: 184 YLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQL 243
Query: 81 ILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTMAVSGSVDNTVA 123
++WD+ T Q + + H + + FN + + S D+TVA
Sbjct: 244 VIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVA 287
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 40.3 bits (90), Expect = 5e-04
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 51 TYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEES 110
T GH +V+D S D S + S S+D +V +W++ T R H S V + ++
Sbjct: 113 TLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIG 172
Query: 111 TMAVSGSVDNTV 122
+ S S D TV
Sbjct: 173 SFIASQSDDKTV 184
Score = 34.7 bits (76), Expect = 0.023
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
K + T++ + + + ++ D + S D + +WN + GH + V
Sbjct: 109 KAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTW 168
Query: 65 SCDSSHIVSASVDKSVILW 83
S I S S DK+VI+W
Sbjct: 169 DPIGSFIASQSDDKTVIIW 187
Score = 29.9 bits (64), Expect = 0.65
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 41 WNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASS 100
W H L + + N A G D SVDK + D T + L R H S
Sbjct: 8 WVKHEGLQIFSIDVQPNGERFATGGGDHK-----SVDKDLQNID-TKERLLATLRDHFGS 61
Query: 101 VTCIKFNEESTMAVSGSVDNTV 122
V C+++ + S SGS D +
Sbjct: 62 VNCVRWAKNSRYVASGSDDQVI 83
Score = 29.5 bits (63), Expect = 0.86
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 84 DVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
DV + + R H + V + ++ + +M SGS+DNTV
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTV 142
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRH-HASSVTCIKFNEESTMAVSGSVDNTVA 123
I S D+++ +W +A+PL +H SV + ++ + + S+D TVA
Sbjct: 300 IAMGSQDRTITVWTTGSARPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGTVA 353
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 40.3 bits (90), Expect = 5e-04
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 25 DGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD 84
DG + +S D L N + T+ GH V + ++ SAS D S LWD
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 85 VTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
T L + H C F+E++ ++G +
Sbjct: 90 ALTGDVLHSFEHKHIVRAC-AFSEDTKSLLTGGFE 123
Score = 35.9 bits (79), Expect = 0.010
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
K + T++ + + + + DG Y ++ +K W+ + ++K+Y N +
Sbjct: 179 KIVQTLE-TKSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYDMPCNIESASLE 236
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
V+ D V ++D T + + + H V C++F SGS D T+
Sbjct: 237 PKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTI 294
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 40.3 bits (90), Expect = 5e-04
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 25 DGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD 84
DG + +S D L N + T+ GH V + ++ SAS D S LWD
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 85 VTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
T L + H C F+E++ ++G +
Sbjct: 90 ALTGDVLHSFEHKHIVRAC-AFSEDTKSLLTGGFE 123
Score = 35.9 bits (79), Expect = 0.010
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
K + T++ + + + + DG Y ++ +K W+ + ++K+Y N +
Sbjct: 179 KIVQTLE-TKSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYDMPCNIESASLE 236
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
V+ D V ++D T + + + H V C++F SGS D T+
Sbjct: 237 PKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTI 294
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 39.9 bits (89), Expect = 6e-04
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 41 WNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASS 100
W H+ L H +VLD S D ++++S SVD S I+WDV + H
Sbjct: 43 WKVHKSLSF-----HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHY 97
Query: 101 VTCIKFNEESTMAVSGSVDNT 121
V + ++ + S S D T
Sbjct: 98 VQGVAWDPLAKYVASLSSDRT 118
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 39.5 bits (88), Expect = 8e-04
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Query: 20 VRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGH---ANEVLDAAGSCDSSHIVSASV 76
V+F+ DG L D I + + R +L T+ LDAA S + +VS S
Sbjct: 211 VKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSG 270
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTVASP 125
D S W V + + + + S IK+ S M V+GS + P
Sbjct: 271 DGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSELAFVIP 319
Score = 36.3 bits (80), Expect = 0.007
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 7 LTTIKCNQQAIRAVRFNVDGT---YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA 63
L TI + + V F T Y G D ++L + H + L+ + GH + V+ +
Sbjct: 68 LKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLS 127
Query: 64 GSCDSSHIVSASVDKSVILWD 84
+S S+D++V+LWD
Sbjct: 128 LCSGGECFISGSLDRTVLLWD 148
Score = 26.2 bits (55), Expect = 8.0
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
I ++ F+ T ++ D I+L++ LKT V + + ++ +S
Sbjct: 36 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 95
Query: 77 ---DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D S+ L + + LR ++ H V + +SGS+D TV
Sbjct: 96 NGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTV 144
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 39.5 bits (88), Expect = 8e-04
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Query: 20 VRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGH---ANEVLDAAGSCDSSHIVSASV 76
V+F+ DG L D I + + R +L T+ LDAA S + +VS S
Sbjct: 208 VKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSG 267
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTVASP 125
D S W V + + + + S IK+ S M V+GS + P
Sbjct: 268 DGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSELAFVIP 316
Score = 36.3 bits (80), Expect = 0.007
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 7 LTTIKCNQQAIRAVRFNVDGT---YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA 63
L TI + + V F T Y G D ++L + H + L+ + GH + V+ +
Sbjct: 65 LKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLS 124
Query: 64 GSCDSSHIVSASVDKSVILWD 84
+S S+D++V+LWD
Sbjct: 125 LCSGGECFISGSLDRTVLLWD 145
Score = 26.2 bits (55), Expect = 8.0
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
I ++ F+ T ++ D I+L++ LKT V + + ++ +S
Sbjct: 33 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 92
Query: 77 ---DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D S+ L + + LR ++ H V + +SGS+D TV
Sbjct: 93 NGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTV 141
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 39.5 bits (88), Expect = 8e-04
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 30 LSCGADKKIKLWNPHRDLMLKT---YGGHANEVLDAAGS-CDSSHIVSASVDKSVILWDV 85
LS I LW P + GH V D S + + S SVD SV +WD+
Sbjct: 240 LSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDI 299
Query: 86 TTAQ-PLRRYRHHASSVTCIKFNE-ESTMAVSGSVDNT 121
+ P ++ H + V I +N S M SGS D T
Sbjct: 300 RLGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGT 337
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 39.5 bits (88), Expect = 8e-04
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 14 QQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVS 73
+++IRA+R++ G +S G DK +K+W+ L T V A S D SH+
Sbjct: 63 KESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSE-KRVSAVAISSDDSHVCY 121
Query: 74 ASVDKSVILW 83
A DK ++W
Sbjct: 122 A--DKFGVVW 129
Score = 28.3 bits (60), Expect = 2.0
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWN-PHRDLM----LKTYG-GHANEVLDAA----GSC 66
I ++ F+ DG Y LS D KI++ P + L ++++ GH+ + A
Sbjct: 158 ITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPEL 217
Query: 67 DSSHIVSASVDKSVILWDVTTAQPL 91
+++S S D +V LWD+T+ L
Sbjct: 218 TQGYLMSGSGDSTVRLWDITSGSLL 242
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 22 FNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKS-- 79
F D + LS G D +KLW M+K Y G L + + + S+D++
Sbjct: 226 FTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASN 285
Query: 80 -VILWDVTTAQPLRRY-RHHASSVTCIKFNEESTMAVSGSVDNTV 122
V+ WD TA + ++ +H + I+ + ++ V+ +D ++
Sbjct: 286 EVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSI 330
Score = 33.5 bits (73), Expect = 0.053
Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW-----------NPHRDLMLKTYGGHAN 57
T+ ++ +R RF+ DG + + GAD IKL+ + +++T+ HA
Sbjct: 26 TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAE 85
Query: 58 EVLDAAGSCDSSHIVSASVDKSVILWDV--TTAQPLRRYRHHASSVTCIKFNEESTMAVS 115
+ D S+ ++S++ D + +D TTA+ + +V I F+ ++
Sbjct: 86 PINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLA 145
Query: 116 GS 117
G+
Sbjct: 146 GT 147
Score = 31.9 bits (69), Expect = 0.16
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 50 KTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDV----------TTAQPL-RRYRHHA 98
KT H + V A S D + D S+ L++V T A+PL R + HA
Sbjct: 25 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHA 84
Query: 99 SSVTCIKFNEESTMAVSGSVDNTV 122
+ + F+ ST+ +S + DN +
Sbjct: 85 EPINDLDFHPRSTILISSAKDNCI 108
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 22 FNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKS-- 79
F D + LS G D +KLW M+K Y G L + + + S+D++
Sbjct: 318 FTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASN 377
Query: 80 -VILWDVTTAQPLRRY-RHHASSVTCIKFNEESTMAVSGSVDNTV 122
V+ WD TA + ++ +H + I+ + ++ V+ +D ++
Sbjct: 378 EVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSI 422
Score = 33.5 bits (73), Expect = 0.053
Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW-----------NPHRDLMLKTYGGHAN 57
T+ ++ +R RF+ DG + + GAD IKL+ + +++T+ HA
Sbjct: 118 TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAE 177
Query: 58 EVLDAAGSCDSSHIVSASVDKSVILWDV--TTAQPLRRYRHHASSVTCIKFNEESTMAVS 115
+ D S+ ++S++ D + +D TTA+ + +V I F+ ++
Sbjct: 178 PINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLA 237
Query: 116 GS 117
G+
Sbjct: 238 GT 239
Score = 31.9 bits (69), Expect = 0.16
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 50 KTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDV----------TTAQPL-RRYRHHA 98
KT H + V A S D + D S+ L++V T A+PL R + HA
Sbjct: 117 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHA 176
Query: 99 SSVTCIKFNEESTMAVSGSVDNTV 122
+ + F+ ST+ +S + DN +
Sbjct: 177 EPINDLDFHPRSTILISSAKDNCI 200
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 39.1 bits (87), Expect = 0.001
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGH--ANEV 59
G L+T + + I ++ F+ D Y + G KKIK++ L ++ H A E+
Sbjct: 693 GVLRT-SELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYE-FNSLFNESVDIHYPAIEM 750
Query: 60 LDAA---GSCDSSHI----VSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEE-ST 111
+ + G C +++I S+ D V LWDVTT Q + + H + F+E T
Sbjct: 751 PNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPT 810
Query: 112 MAVSGSVDNTV 122
SGS D +V
Sbjct: 811 KLASGSDDCSV 821
Score = 30.7 bits (66), Expect = 0.37
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 14/126 (11%)
Query: 3 DLKTLTTIKC----NQQAIRAVRFNVDGTYCLSCGADKKIKLWN----PHRDLMLK---- 50
DL+ L T C + +A+ +F +D ++ D +KLW+ H L
Sbjct: 867 DLRNLRTPWCILSGHNKAVSYAKF-LDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSL 925
Query: 51 TYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHA-SSVTCIKFNEE 109
T+GGH NE S +I S V + + P+ Y+ + ++ + E+
Sbjct: 926 TFGGHTNEKNFVGLSTSDGYIACGSETNEVYAYHRSLPMPITSYKFGSIDPISGKEIEED 985
Query: 110 STMAVS 115
+ + VS
Sbjct: 986 NNLFVS 991
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 39.1 bits (87), Expect = 0.001
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDA 62
+LK+ + C+ ++ V V+G + D I+L++ M++ + GH + + D
Sbjct: 507 ELKSQWDVGCS--LVKIVYHRVNGLLA-TVADDFVIRLYDVVTLKMVREFRGHTDRITDL 563
Query: 63 AGSCDSSHIVSASVDKSVILWDVTTAQPL 91
S D ++S+S+D S+ +WDV A+ +
Sbjct: 564 CFSEDGKWVISSSMDGSLRIWDVILAKQI 592
Score = 35.5 bits (78), Expect = 0.013
Identities = 21/96 (21%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 27 TYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVT 86
T +S G +K+W+ + LK+ ++ + + + + D + L+DV
Sbjct: 487 TLMISAGYHGDLKVWD-FKKRELKSQWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVV 545
Query: 87 TAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
T + +R +R H +T + F+E+ +S S+D ++
Sbjct: 546 TLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSL 581
Score = 32.3 bits (70), Expect = 0.12
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLW----NPHRDLMLKTYGGHANEVLDAAGSCDS 68
+ +I ++ F + +S AD +K+W N +L+ GH+ L +
Sbjct: 267 HDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNG 326
Query: 69 SHIVSASVDKSVILWDVTTAQPLRR--YRHHASSVTCIKFNEE 109
HI+SA D++ L+ V Q R RH + ++ EE
Sbjct: 327 RHILSAGQDRAFRLFSVIQEQQSRELSQRHISRRAKKLRLKEE 369
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHR-DLM--LKTYGGHANEVLDAAGSCDSSHIVS 73
+ +R++ DGT ++ +DKK +++ D + L + GH + + S DS +++
Sbjct: 54 VNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLT 113
Query: 74 ASVDKSVILWDV 85
S DKS +W+V
Sbjct: 114 VSADKSAKVWEV 125
Score = 38.3 bits (85), Expect = 0.002
Identities = 25/117 (21%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPH-RDLMLKTYGGHANEVLD 61
+LK ++ ++ A+ +R++ D T S A+++ +W+ + + L H +
Sbjct: 345 NLKEEAVLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINS 404
Query: 62 AAGSCDSSHIVSASVDKSVILWDV--TTAQPLRRYRHHASSVTCIKFNEESTMAVSG 116
A S ++ + + S+D VI+++V + + H V + F ++ T+A SG
Sbjct: 405 LAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDCTVASSG 461
Score = 28.7 bits (61), Expect = 1.5
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 31 SCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQ- 89
+CG D + ++ ++ H+N V S D + ++ S DK +++D T
Sbjct: 26 TCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDK 85
Query: 90 --PLRRYRHHASSVTCIKFNEESTMAVSGSVDNT-----VASPGTLSVVDKS 134
L H S+ + ++ +S ++ S D + VA GT+ V K+
Sbjct: 86 VGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKT 137
Score = 27.1 bits (57), Expect = 4.6
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 52 YGGHANEVLDAAGSCDSS-HIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEES 110
+ GH+ VL A I + D V +D + +R H++ V CI+++ +
Sbjct: 4 FDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDG 63
Query: 111 TMAVSGSVD 119
T ++ S D
Sbjct: 64 TKFITVSSD 72
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 37.9 bits (84), Expect = 0.002
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEV----- 59
+T+ +Q A+R + + DG +SCG D ++LWN R + + N +
Sbjct: 90 RTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSAT 149
Query: 60 ---LDAAGSCDSSH--IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFN--EESTM 112
+A + D + A+ + +W+ +QP++ ++ SV ++FN E + +
Sbjct: 150 YVWKNAFWAVDHQFEGDLFATAGAQLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLL 209
Query: 113 AVSGS 117
A S S
Sbjct: 210 ATSAS 214
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 31 SCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDV 85
S D I+LW+ + + GH V S D + +VS D +V LW+V
Sbjct: 74 SASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 31.9 bits (69), Expect = 0.16
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
I SAS+D + LWD+++ + + ++ H +V + + + + VS D TV
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTV 123
Score = 31.1 bits (67), Expect = 0.28
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 55 HANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYR-HHASSVTCIKFNEESTMA 113
H + V+D S V+ S D+SV ++ Y V C+K++ ++T
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYV 337
Query: 114 VSGSVDNTV 122
+SGS D +
Sbjct: 338 ISGSDDTNL 346
Score = 27.1 bits (57), Expect = 4.6
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPL 91
SCD+++++S S D ++ LW ++ L
Sbjct: 331 SCDATYVISGSDDTNLRLWKAKASEQL 357
Score = 26.2 bits (55), Expect = 8.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 15 QAIRAVRFNVDGTYCLSCGADKKIKLW 41
Q + V+++ D TY +S D ++LW
Sbjct: 323 QRVFCVKYSCDATYVISGSDDTNLRLW 349
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 37.9 bits (84), Expect = 0.002
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Query: 14 QQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC-DSSHIV 72
+ + +V F DG +C +++++ + L+T H+ D H+V
Sbjct: 93 RDVVSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLV 152
Query: 73 SASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTMAVSGSVDNTV 122
S D V WDV A + H V C + +M V+GS D+TV
Sbjct: 153 SGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTV 203
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 37.9 bits (84), Expect = 0.002
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 22 FNVDGTYCLSCGADKK----IKLWNPHRDLMLKTYGG-HANEVLDAAGSCDSSHIVSASV 76
++ DGT SCG K I WN + +TY G H + + ++A
Sbjct: 558 YSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGD 617
Query: 77 DKSVILWDVTTAQPLRRYRHHA--SSVTCIKFNEESTMAVSGSVDNTV 122
D S+ WD+ T Q L + I+FN+E ++ + DN +
Sbjct: 618 DFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMI 665
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 31 SCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS--HIVSASVDKSVILW 83
+CG DK IK+W+ + T+ GH V + I S ++D + W
Sbjct: 481 TCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 2.6
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKK-IKLWNPHRDLMLKTYGGHANEV 59
M KT+ T A + F+ ++ G D I+++N D + GH+ +
Sbjct: 852 MMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRI 911
Query: 60 LDAAGSCDSSHIVSASVDKSVILWD 84
A S + +VS+ D + +W+
Sbjct: 912 TGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 37.9 bits (84), Expect = 0.002
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 22 FNVDGTYCLSCGADKK----IKLWNPHRDLMLKTYGG-HANEVLDAAGSCDSSHIVSASV 76
++ DGT SCG K I WN + +TY G H + + ++A
Sbjct: 558 YSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGD 617
Query: 77 DKSVILWDVTTAQPLRRYRHHA--SSVTCIKFNEESTMAVSGSVDNTV 122
D S+ WD+ T Q L + I+FN+E ++ + DN +
Sbjct: 618 DFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMI 665
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 31 SCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS--HIVSASVDKSVILW 83
+CG DK IK+W+ + T+ GH V + I S ++D + W
Sbjct: 481 TCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 2.6
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKK-IKLWNPHRDLMLKTYGGHANEV 59
M KT+ T A + F+ ++ G D I+++N D + GH+ +
Sbjct: 852 MMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRI 911
Query: 60 LDAAGSCDSSHIVSASVDKSVILWD 84
A S + +VS+ D + +W+
Sbjct: 912 TGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 37.9 bits (84), Expect = 0.002
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 35 DKKIKLWNPHRDLMLKTYGG-HANEVLDAAG-SCDSSHIVSASVDKSVILWDVTTAQPL- 91
D+ ++ + +D +L T+ H + + AG S D +V+ + D V +W V+ P
Sbjct: 3307 DRSLRFMSYDQDKLLSTHENLHESNQIQCAGVSHDGRIVVTGAEDGLVCVWRVSKDGPRG 3366
Query: 92 -RRYR------HHASSVTCIKFNEESTMAVSGSVDNTV 122
RR R H + VTC++ ++ M SGS D TV
Sbjct: 3367 SRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTV 3404
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 49 LKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE 108
L + GH+ EV A + S SVDK++ +WD+ T Q + + H +VT + +
Sbjct: 251 LTSLEGHSGEVTCFA--VGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWD 308
Query: 109 ESTMAVSGSVDNTV 122
+ +S S+D T+
Sbjct: 309 K--CLISSSLDGTI 320
Score = 29.5 bits (63), Expect = 0.86
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 22 FNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVI 81
F V G S DK IK+W+ + + T H V C ++S+S+D ++
Sbjct: 264 FAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLL--CWDKCLISSSLDGTIK 321
Query: 82 LW 83
+W
Sbjct: 322 VW 323
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 33 GADKKIKLWNPHR---DLMLKTYGGHANEVLDAAGSCDS-SHIVSASVDKSVILWDVTTA 88
G+D +++W+P + + + H++ + S H++SAS D ++LWD+ TA
Sbjct: 332 GSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTA 391
Query: 89 QPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTVASPG 126
PL H V + + ++ G+ N S G
Sbjct: 392 WPLSVIDTHNDKVLSADWWKGESVVSGGADSNLRISSG 429
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Query: 12 CNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHI 71
C+ + AV + + S GAD + +PH +++ + V S D +
Sbjct: 114 CHPGGVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKIL 173
Query: 72 VSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
V+AS ++ + + ++++ H V C+ F E+ +S +V
Sbjct: 174 VTASTQLKT--FNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLSSAV 218
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 37.5 bits (83), Expect = 0.003
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 14 QQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVS 73
+ ++ +V + + GT+ + K+++W+ R +T GH V A + SS + S
Sbjct: 252 EDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRV--GALAWGSSVLSS 309
Query: 74 ASVDKSVILWDVTTAQP-LRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
S DKS++ D+ + + + H S V +K++ ++ SG DN
Sbjct: 310 GSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDN 357
Score = 36.7 bits (81), Expect = 0.006
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFN 107
GH +EV S D+ + S D + +W+ + QP+ +Y H ++V I ++
Sbjct: 333 GHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWS 386
Score = 28.7 bits (61), Expect = 1.5
Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 16 AIRAVRFN--VDGTYCLSCG-ADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
A++A+ ++ V G G AD+ I+ WN + L + ++V + A S + + +V
Sbjct: 379 AVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDT-CSQVCNLAWSKNVNELV 437
Query: 73 SAS--VDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
S +I+W T + H V + + + V+G+ D T+
Sbjct: 438 STHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETL 489
Score = 28.3 bits (60), Expect = 2.0
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 12 CNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHI 71
C+Q A NV+ + +I +W + T GH VL A S D I
Sbjct: 421 CSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTI 480
Query: 72 VSASVDKSVILWDV 85
V+ + D+++ W+V
Sbjct: 481 VTGAGDETLRFWNV 494
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 37.5 bits (83), Expect = 0.003
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFN 107
GH +E+ S D+ + S D + +W+ + QP+ R+ HA++V I ++
Sbjct: 290 GHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWS 343
Score = 30.7 bits (66), Expect = 0.37
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSC 66
++ +K ++ I ++++ D S G D K+ +WN H + + HA V A S
Sbjct: 285 VSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSP 344
Query: 67 DSSHIVSA---SVDKSVILWDVTT 87
++++ + D+ + W+ TT
Sbjct: 345 HHFGLLASGGGTADRCIRFWNTTT 368
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 34 ADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDV 85
+ +I +W L T GH+ VL A S D IV+ + D+++ W+V
Sbjct: 400 SQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 27.9 bits (59), Expect = 2.6
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 16 AIRAVRFNVDGTYCLSCG---ADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
A++A+ ++ L+ G AD+ I+ WN + L ++ +V + S + + +V
Sbjct: 336 AVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNS-QVCNLVWSKNVNELV 394
Query: 73 SAS--VDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
S +I+W T L H+ V + + + V+G+ D T+
Sbjct: 395 STHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETL 446
Score = 26.2 bits (55), Expect = 8.0
Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 28 YCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSV--ILWDV 85
+C A K I W+PH +L + GG A+ + + ++H+ + V ++W
Sbjct: 330 FCEHAAAVKAIA-WSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSK 388
Query: 86 TTAQPLRRYRHHASSVTCIKFNEESTMA 113
+ + + + + + K+ S +A
Sbjct: 389 NVNELVSTHGYSQNQIIVWKYPTMSKLA 416
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 25 DGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD 84
DG + +S D L N + T+ GH V + ++ SAS D + +W+
Sbjct: 25 DGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWN 84
Query: 85 VTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
T L + H C F+E++ ++G ++
Sbjct: 85 ALTGDELHSFEHKHIVRAC-AFSEDTHRLLTGGME 118
Score = 33.1 bits (72), Expect = 0.070
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
+ + + DG Y ++ +K W+ +LK+Y N + + ++
Sbjct: 185 VTSAEVSQDGRY-ITTADGSSVKFWDAKNFGLLKSYDMPCNVESASLEPKHGNTFIAGGE 243
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D V +D T + + + H V C+++ SGS D TV
Sbjct: 244 DMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTV 289
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 37.1 bits (82), Expect = 0.004
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 53 GGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEES-T 111
GG++ + S D +V+ S D S+ ++D+ + R H S V + F +ES
Sbjct: 226 GGYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGN 285
Query: 112 MAVSGSVDN 120
+ +SGS DN
Sbjct: 286 LILSGSDDN 294
Score = 27.1 bits (57), Expect = 4.6
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSH-IVSAS 75
I +V+F+ DG ++ +D I +++ + + H ++V + +S + I+S S
Sbjct: 232 IFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGS 291
Query: 76 VDKSVILWD----VTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D +WD + +P H VT I + +S D T+
Sbjct: 292 DDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTI 342
Score = 27.1 bits (57), Expect = 4.6
Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Query: 26 GTYCLSCGADKKIKLWNPH----RDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVI 81
G LS D K+W+ RD GH V D + +S D+++
Sbjct: 284 GNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIK 343
Query: 82 LWDVTTAQPLRRYRH 96
LWD+ RH
Sbjct: 344 LWDIRKMSSSAPARH 358
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 25 DGTYCLSCGADKKIKLWN 42
DG Y +S G D+ IKLW+
Sbjct: 329 DGRYFISNGKDQTIKLWD 346
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 71 IVSASVDKSVILWD--VTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ S+S D S+ + D T+ P RHH VT + + +ST+ SGS+D+ V
Sbjct: 33 VTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDSTLLASGSIDHCV 86
Score = 31.9 bits (69), Expect = 0.16
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHR-DLMLKTYGGHANEVLDAAGSCDSSHI 71
N + R++ DG G + +++ + + G H + + + +I
Sbjct: 194 NTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYI 253
Query: 72 VSASVDKSVILWDVTTAQPLRRYR 95
++ +DK V+LWDV Q + R++
Sbjct: 254 ATSGLDKQVLLWDVDKKQDIDRHK 277
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
IR + FN G+ + G D+ IKL N +++ GH V + + S
Sbjct: 107 IRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDT 166
Query: 77 DKSVILWDV 85
+V+ W++
Sbjct: 167 TGTVLCWEL 175
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 37.1 bits (82), Expect = 0.004
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRD---LMLKTYGGHANEVLDAA 63
L+T+ + + + +V+F D L+ ADK +++W D T H+ EV
Sbjct: 257 LSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVT 316
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSV--TCIKFNEESTMAVSGSVDNT 121
+ + VSAS+D + +D+++ L + + +V T F+ + + +G+ +
Sbjct: 317 VHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSV 376
Query: 122 V 122
V
Sbjct: 377 V 377
Score = 36.3 bits (80), Expect = 0.007
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
I + VD + +L+D + Q L H+ VT +KF +S + ++ S D TV
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTV 288
Score = 32.7 bits (71), Expect = 0.092
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 33 GADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILW-DVTTAQPL 91
G D L++ +L T GH+ +V DS +++AS DK+V +W +
Sbjct: 241 GVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYA 300
Query: 92 RRY--RHHASSVTCIKFNEESTMAVSGSVDNT 121
Y H++ V + + + VS S+D T
Sbjct: 301 CGYTLNDHSAEVRAVTVHPTNKYFVSASLDGT 332
Score = 30.7 bits (66), Expect = 0.37
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEV-LDAAGSCD 67
T+ + +RAV + Y +S D ++ L + V AA
Sbjct: 304 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Query: 68 SSHIVSASVDKSVI-LWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
I+ +SV+ +WDV + + ++ H VT I F+E + + D
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Score = 28.3 bits (60), Expect = 2.0
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTY-GGHANEV-LDAAGS---CDSSHI 71
+ A+ F+ +G Y L+ A+ ++LW+ + K++ AN V D +GS +S I
Sbjct: 398 VTAISFSENG-YFLATAAEDGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGIAASDI 456
Query: 72 VSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
W++ P TC+KF ++ GS+D
Sbjct: 457 KVYQTASVKAEWNLIKTLP---DLSGTGKATCVKFGSDAQYVAVGSMD 501
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 37.1 bits (82), Expect = 0.004
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRD---LMLKTYGGHANEVLDAA 63
L+T+ + + + +V+F D L+ ADK +++W D T H+ EV
Sbjct: 257 LSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVT 316
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSV--TCIKFNEESTMAVSGSVDNT 121
+ + VSAS+D + +D+++ L + + +V T F+ + + +G+ +
Sbjct: 317 VHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSV 376
Query: 122 V 122
V
Sbjct: 377 V 377
Score = 36.3 bits (80), Expect = 0.007
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
I + VD + +L+D + Q L H+ VT +KF +S + ++ S D TV
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTV 288
Score = 32.7 bits (71), Expect = 0.092
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 33 GADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILW-DVTTAQPL 91
G D L++ +L T GH+ +V DS +++AS DK+V +W +
Sbjct: 241 GVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYA 300
Query: 92 RRY--RHHASSVTCIKFNEESTMAVSGSVDNT 121
Y H++ V + + + VS S+D T
Sbjct: 301 CGYTLNDHSAEVRAVTVHPTNKYFVSASLDGT 332
Score = 30.7 bits (66), Expect = 0.37
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEV-LDAAGSCD 67
T+ + +RAV + Y +S D ++ L + V AA
Sbjct: 304 TLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Query: 68 SSHIVSASVDKSVI-LWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
I+ +SV+ +WDV + + ++ H VT I F+E + + D
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Score = 28.3 bits (60), Expect = 2.0
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTY-GGHANEV-LDAAGS---CDSSHI 71
+ A+ F+ +G Y L+ A+ ++LW+ + K++ AN V D +GS +S I
Sbjct: 398 VTAISFSENG-YFLATAAEDGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGIAASDI 456
Query: 72 VSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
W++ P TC+KF ++ GS+D
Sbjct: 457 KVYQTASVKAEWNLIKTLP---DLSGTGKATCVKFGSDAQYVAVGSMD 501
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 37.1 bits (82), Expect = 0.004
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 5/113 (4%)
Query: 15 QAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLM--LKTYGGHANEVLDAAGSCDSSHIV 72
+ +R+ ++ G + D +W + + T GH NEV + + S +
Sbjct: 75 RTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLA 134
Query: 73 SASVDKSVILWDVTTAQP---LRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ S DKSV +W+V H V ++++ + S S DNT+
Sbjct: 135 TCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTI 187
Score = 35.5 bits (78), Expect = 0.013
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW-----NPHRDLMLKTYGGHAN 57
+ + ++T++ ++ +++V +N G+ +C DK + +W N + + T GH
Sbjct: 107 EFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLT--GHTQ 164
Query: 58 EVLDAAGSCDSSHIVSASVDKSVILW-------DVTTAQPLRRYRH-HASSVTCIKFNEE 109
+V + S S D ++ +W + Q L + H+S+V I FN
Sbjct: 165 DVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAA 224
Query: 110 STMAVSGSVDNTVASPGT 127
V+ S D T+ GT
Sbjct: 225 GDKMVTCSDDLTLKIWGT 242
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 37.1 bits (82), Expect = 0.004
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Query: 27 TYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVT 86
T+ S G D ++W+ + + GH +VL S + H+ S D +WD+
Sbjct: 143 TFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLR 202
Query: 87 TAQPLRRYRHHASSVTCIKFN-EESTMAVSGSVDNTV 122
+ L H + V+ +K+ +E + S D V
Sbjct: 203 MRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNV 239
Score = 30.7 bits (66), Expect = 0.37
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 3 DLKTLTTIKCNQQAIR---AVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEV 59
DL+T I Q I+ +V F+ +G + S G D + ++W+ +L H N V
Sbjct: 158 DLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLV 217
Query: 60 LDAAGSCDSSH-IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEEST 111
+ + +AS D +V +W ++ H S V + +S+
Sbjct: 218 SQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDIAVDSS 270
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 37.1 bits (82), Expect = 0.004
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 9/132 (6%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN--PHRDLMLKTYGG--HAN 57
G L TL + A+ ++ DG Y LS G+D +I+LW+ R+ ++ G N
Sbjct: 300 GMLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTN 359
Query: 58 EVLDAAGSCDSS--HIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVS 115
+ + S D + + K+ +W T LR H+ S TC + + + S
Sbjct: 360 KGIQLDTSDDPALVFVPCMKTVKAFGMWSGRTTLMLR--GHYESVNTCCFNSNDQELYTS 417
Query: 116 GSVDN-TVASPG 126
GS V SPG
Sbjct: 418 GSDRQILVWSPG 429
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 36.7 bits (81), Expect = 0.006
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
I +RF+ + + L DK ++L++ + DLM + H VLD DSS S
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYDANGDLMRGEFK-HGGAVLDCCFHDDSSGF-SVCA 76
Query: 77 DKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D V D + H V C++++ + ++GS D T+
Sbjct: 77 DTKVRRIDFNAGKE-DVLGTHEKPVRCVEYSYAAGQVITGSWDKTI 121
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.7 bits (81), Expect = 0.006
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 22 FNVDGTYCLSCGADKK----IKLWNPHRDLMLKTYGG-HANEVLDAAGSCDSSHIVSASV 76
++ DGT SCG K I WN + +TY G H + + ++A
Sbjct: 558 YSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGD 617
Query: 77 DKSVILWDVTTAQPLRRYRHHA--SSVTCIKFNEE-STMAVSGS 117
D S+ WD+ Q L + I+FN+E S +AVSG+
Sbjct: 618 DFSIKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGN 661
Score = 29.5 bits (63), Expect = 0.86
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS--HIVSASVDKSVILW 83
++CG DK IK+W+ + T+ GH V + I S ++D + W
Sbjct: 480 ITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 2.6
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKK-IKLWNPHRDLMLKTYGGHANEV 59
M KT+ T A + F+ ++ G D I+++N D + GH+ +
Sbjct: 863 MMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRI 922
Query: 60 LDAAGSCDSSHIVSASVDKSVILWD 84
A S + +VS+ D + +W+
Sbjct: 923 TGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.7 bits (81), Expect = 0.006
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 22 FNVDGTYCLSCGADKK----IKLWNPHRDLMLKTYGG-HANEVLDAAGSCDSSHIVSASV 76
++ DGT SCG K I WN + +TY G H + + ++A
Sbjct: 558 YSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGD 617
Query: 77 DKSVILWDVTTAQPLRRYRHHA--SSVTCIKFNEE-STMAVSGS 117
D S+ WD+ Q L + I+FN+E S +AVSG+
Sbjct: 618 DFSIKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGN 661
Score = 29.5 bits (63), Expect = 0.86
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS--HIVSASVDKSVILW 83
++CG DK IK+W+ + T+ GH V + I S ++D + W
Sbjct: 480 ITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 2.6
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKK-IKLWNPHRDLMLKTYGGHANEV 59
M KT+ T A + F+ ++ G D I+++N D + GH+ +
Sbjct: 863 MMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRI 922
Query: 60 LDAAGSCDSSHIVSASVDKSVILWD 84
A S + +VS+ D + +W+
Sbjct: 923 TGLAFSNVLNVLVSSGADAQLCVWN 947
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 36.3 bits (80), Expect = 0.007
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFN-EESTM 112
GH +EV S D + S D +++W+ + QP+ + H ++V I ++ +S++
Sbjct: 296 GHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSL 355
Query: 113 AVSG 116
SG
Sbjct: 356 LASG 359
Score = 32.3 bits (70), Expect = 0.12
Identities = 21/106 (19%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSAS 75
++ +V++ +G+Y + ++++W+ + ++T GGH + + +S + S S
Sbjct: 217 SVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGH--QTRTGVLAWNSRILSSGS 274
Query: 76 VDKSVILWDVTTAQP-LRRYRHHASSVTCIKFNEESTMAVSGSVDN 120
D++++ D+ + + H S V +K++ + SG DN
Sbjct: 275 RDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDN 320
Score = 29.5 bits (63), Expect = 0.86
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 34 ADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDV 85
+ +I LW + T GH+ VL A S D IV+ + D+++ W+V
Sbjct: 406 SQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 36.3 bits (80), Expect = 0.007
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 50 KTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEE 109
+T GH +V + + + IVSAS D +I+W+ T+Q + + V F+
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 110 STMAVSGSVDNTVASPGTLSVVDK 133
G +D+ + S DK
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADK 142
Score = 32.7 bits (71), Expect = 0.092
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 30 LSCGADKKIKLWNPHR-DLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTA 88
+S D +LW+ ++T+ GH +V D + S D + L+D+ T
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 89 QPLRRYRHHASS----VTCIKFNEESTMAVSGSVDN 120
L+ Y+ H VT I F+ + +G N
Sbjct: 281 HQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASN 316
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRY-----RHHASSVTCIKFN-EESTMAVSGSVDN 120
+ +H++++S D++ ILWDVTT + H + V + + +SGS D+
Sbjct: 168 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDS 227
Query: 121 T 121
T
Sbjct: 228 T 228
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 36.3 bits (80), Expect = 0.007
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 50 KTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEE 109
+T GH +V + + + IVSAS D +I+W+ T+Q + + V F+
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 110 STMAVSGSVDNTVASPGTLSVVDK 133
G +D+ + S DK
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADK 142
Score = 32.7 bits (71), Expect = 0.092
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 30 LSCGADKKIKLWNPHR-DLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTA 88
+S D +LW+ ++T+ GH +V D + S D + L+D+ T
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 89 QPLRRYRHHASS----VTCIKFNEESTMAVSGSVDN 120
L+ Y+ H VT I F+ + +G N
Sbjct: 281 HQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASN 316
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRY-----RHHASSVTCIKFN-EESTMAVSGSVDN 120
+ +H++++S D++ ILWDVTT + H + V + + +SGS D+
Sbjct: 168 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDS 227
Query: 121 T 121
T
Sbjct: 228 T 228
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 36.3 bits (80), Expect = 0.007
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 48 MLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFN 107
+LK GH+ +V D S ++ +I S+S+DK++ +W+++ + R + S CI+F+
Sbjct: 208 VLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCI-RVIYGISPQYCIRFH 266
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 36.3 bits (80), Expect = 0.007
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 15/130 (11%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW------NPHRDLMLKTYGGH 55
GDL + + C A+ F+ DG + + G +KKIK++ RD+
Sbjct: 478 GDLLNSSNLVC------AIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA 531
Query: 56 ANEVLDAA--GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTM 112
+ L S S + S++ + V +WDV Q + + H V I ++ + T+
Sbjct: 532 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTL 591
Query: 113 AVSGSVDNTV 122
SGS D +V
Sbjct: 592 LASGSDDGSV 601
Score = 30.7 bits (66), Expect = 0.37
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 6 TLTTIKCNQQAIRAVRFNVDGTYCLSCG-ADKKIKLWNPHRD-LMLKTYGGHANEVLDAA 63
++ TIK I V+F + L+ G AD K+ ++ L L T GH ++ +
Sbjct: 611 SIGTIKTKAN-ICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGH-HKTVSYV 668
Query: 64 GSCDSSHIVSASVDKSVILWDVTTA------QPLRRYRHHASSVTCIKFNEESTMAVSGS 117
DSS +VS+S D ++ LWD++ + PL + H + + + +GS
Sbjct: 669 RFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGS 728
Query: 118 VDNTV 122
N V
Sbjct: 729 ETNEV 733
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 36.3 bits (80), Expect = 0.007
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 15/130 (11%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLW------NPHRDLMLKTYGGH 55
GDL + + C A+ F+ DG + + G +KKIK++ RD+
Sbjct: 478 GDLLNSSNLVC------AIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA 531
Query: 56 ANEVLDAA--GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE-ESTM 112
+ L S S + S++ + V +WDV Q + + H V I ++ + T+
Sbjct: 532 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTL 591
Query: 113 AVSGSVDNTV 122
SGS D +V
Sbjct: 592 LASGSDDGSV 601
Score = 30.7 bits (66), Expect = 0.37
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 6 TLTTIKCNQQAIRAVRFNVDGTYCLSCG-ADKKIKLWNPHRD-LMLKTYGGHANEVLDAA 63
++ TIK I V+F + L+ G AD K+ ++ L L T GH ++ +
Sbjct: 611 SIGTIKTKAN-ICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGH-HKTVSYV 668
Query: 64 GSCDSSHIVSASVDKSVILWDVTTA------QPLRRYRHHASSVTCIKFNEESTMAVSGS 117
DSS +VS+S D ++ LWD++ + PL + H + + + +GS
Sbjct: 669 RFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGS 728
Query: 118 VDNTV 122
N V
Sbjct: 729 ETNEV 733
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 35.9 bits (79), Expect = 0.010
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEES-TMAVSGSVDNTV 122
+ S S DK V +WDV T + HH V + +N + + +SGS D TV
Sbjct: 230 VASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTV 282
Score = 27.1 bits (57), Expect = 4.6
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 55 HANEVLDAAGSCDSSHIVSA-SVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
H +EV + + + ++++ S D+SV LWD++ QP + ++V + N M
Sbjct: 344 HDSEVSSISYNIHAPNLLATGSADESVKLWDLSNNQPSWIATNKPNAVRAMNKNFCCHMF 403
Query: 114 VSG 116
VSG
Sbjct: 404 VSG 406
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 35.9 bits (79), Expect = 0.010
Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 14 QQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVS 73
Q AI ++ F+ DG Y + G D +++++ ++ + +L A S D ++++
Sbjct: 303 QGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLT 362
Query: 74 ASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEE-STMAVSGSVDNTVASPGTL 128
D V +W + + + H S V+ + F+ S+ GS +N + G++
Sbjct: 363 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSEGSGENVMYRFGSV 418
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 35.9 bits (79), Expect = 0.010
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 4 LKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA 63
L +T N A F+ DG + A +K+W+ + +GGH E+ +
Sbjct: 344 LAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSIS 403
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRY 94
S + + +A++D V LWD+ + R +
Sbjct: 404 FSENGYFLATAALD-GVRLWDLRKLKNFRTF 433
Score = 35.1 bits (77), Expect = 0.017
Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRD---LMLKTYGGHANEVLDAA 63
L+T+ + + + +++F D L+ +DK +++W D T H+ EV
Sbjct: 257 LSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVT 316
Query: 64 GSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTVA 123
+ + VSAS+D + +D+++ L + VT N+ + A + D +
Sbjct: 317 VHATNKYFVSASLDSTWCFYDLSSGLCL-------AQVTDASENDVNYTAAAFHPDGLIL 369
Query: 124 SPGTLSVVDK 133
GT + K
Sbjct: 370 GTGTAQSIVK 379
Score = 34.7 bits (76), Expect = 0.023
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLML-KTYGGHANEV- 59
G+ + T+K + +RAV + Y +S D ++ L L + N+V
Sbjct: 297 GNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVN 356
Query: 60 LDAAGSCDSSHIVSASVDKSVI-LWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
AA I+ +S++ +WDV + + ++ H +T I F+E + ++
Sbjct: 357 YTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAAL 416
Query: 119 D 119
D
Sbjct: 417 D 417
Score = 34.3 bits (75), Expect = 0.030
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
I + +D + +L+D + Q L H+ VT IKF ++ + ++ S D TV
Sbjct: 237 IATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTV 288
Score = 33.5 bits (73), Expect = 0.053
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 33 GADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVT---TAQ 89
G D L++ +L T GH+ +V D+ +++AS DK+V +W +
Sbjct: 241 GIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYT 300
Query: 90 PLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
+ H++ V + + + VS S+D+T
Sbjct: 301 SRHTLKDHSAEVRAVTVHATNKYFVSASLDST 332
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 35.5 bits (78), Expect = 0.013
Identities = 22/114 (19%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 16 AIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSAS 75
A+ + + DGT S D+ +K+W L+++ ++ ++A ++ I + S
Sbjct: 167 AVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIYTGS 226
Query: 76 VDKSVILWDVT-TAQPLRRYRHHASSVTCIKFNEE-STMAVSGSVDNTVASPGT 127
D+ + +W + +++ R H+ + N + +A+SG+ + + S G+
Sbjct: 227 SDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGS 280
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 35.5 bits (78), Expect = 0.013
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHAN 57
T++ + + + VRF +DG ++ G D +KLW+ +++TY GH N
Sbjct: 108 TLQGHTKTVSYVRF-LDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVN 155
Score = 29.1 bits (62), Expect = 1.1
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 14 QQAIRAVRFNVDGTYCLSCG-ADKKIKLWNPHR--DLMLKTYGGHANEVLDAAGSCDSSH 70
+ A+ V F+ G ++ G AD+K +++ + D L T GH V D
Sbjct: 69 RSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPAL-TLQGHTKTV-SYVRFLDGGT 126
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRHHASS 100
+V+A D + LW V + +R Y H ++
Sbjct: 127 VVTAGTDGCLKLWSVEDGRVIRTYEGHVNN 156
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 35.1 bits (77), Expect = 0.017
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 43 PHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVT 102
P+ + Y GH V + I S S D SV +W+V T + L+ ++ ++
Sbjct: 410 PYPNSCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD-EAIM 468
Query: 103 CIKFNEESTMAV 114
C+ +N S + V
Sbjct: 469 CVAWNPLSRLPV 480
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 35.1 bits (77), Expect = 0.017
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Query: 26 GTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAA-GSCDSSHIVSASVDKSVILWD 84
G S D +++W+ H E+L D + ++SVDK+V +WD
Sbjct: 162 GDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWD 221
Query: 85 VTTAQ-PLRRYRHHASSVTCIKFN-EESTMAVSGSVDNTV 122
V + + PL H +V +KF+ ++ S S D +V
Sbjct: 222 VRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSV 261
Score = 26.2 bits (55), Expect = 8.0
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 56 ANEVLDAAGSCDSSHIVSASV-DKSVILWDVTT---AQPLRRYRHHASSVTCIKFN-EES 110
A+ V D S ++ A++ D SV ++D + P+R ++ HA V + +N
Sbjct: 60 ADAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRR 119
Query: 111 TMAVSGSVDNTV 122
++ S D+TV
Sbjct: 120 DSFLTSSWDDTV 131
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 34.7 bits (76), Expect = 0.023
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 41 WNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQP----LRRYRH 96
W P R +++ H + V D A S D S VSAS D +V +WD + R +
Sbjct: 1067 WKP-RGVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTY 1125
Query: 97 H--ASSVTCIKFNEESTMAVSGSVDNTV 122
H S C ST V G+ D +
Sbjct: 1126 HLEGSRGMCTTMLRNSTQVVVGASDGVI 1153
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 34.7 bits (76), Expect = 0.023
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 56 ANEVLDAAGSCDSSHI-VSASVDKSVILWDVTTAQPLRRYRHHASSV 101
A+ + A C+SSH+ +S S+D ++ +WD+ + + HH + V
Sbjct: 536 AHRMFGDANGCNSSHVLISGSMDCTIRIWDLESGNVIMIMHHHVAPV 582
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 34.7 bits (76), Expect = 0.023
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 25 DGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD 84
DG AD IKL + L+T GH V A S D++ +V+ S D +V+LW
Sbjct: 2637 DGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWR 2696
Query: 85 VTTA 88
+ A
Sbjct: 2697 IHKA 2700
Score = 31.9 bits (69), Expect = 0.16
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D I D S+ L A+ L H + VTC+ + ++ V+GS D+TV
Sbjct: 2637 DGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTV 2692
Score = 28.3 bits (60), Expect = 2.0
Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 3/118 (2%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAG 64
KTL T + + + + D + ++ D + LW H+ +T + A
Sbjct: 2659 KTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSRTSVSEPSTGSGAPS 2718
Query: 65 SCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
S ++++ + +K P++ R H + C + + + VS S + V
Sbjct: 2719 STSNTNLANTLANKGK---KCRLEGPIQVLRGHRRELVCCCVSSDQGVVVSSSESSDV 2773
Score = 26.2 bits (55), Expect = 8.0
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
GH E++ S D +VS+S V+L + + +RR + CI ++ MA
Sbjct: 2747 GHRRELVCCCVSSDQGVVVSSSESSDVLLHSIRKGRLIRRLVGVKADSLCIS-SDGVIMA 2805
Query: 114 VSGS 117
S S
Sbjct: 2806 WSSS 2809
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 34.3 bits (75), Expect = 0.030
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 19 AVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV-SASVD 77
A F+ DG S D +K+ + LK GH S IV S S+D
Sbjct: 111 AAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLD 170
Query: 78 KSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGS 117
V LW+ TT++ +R + + + I F+ E + S
Sbjct: 171 LEVRLWNTTTSECIRSHLFY-RPIASIAFHAEGELLAVAS 209
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 33.9 bits (74), Expect = 0.040
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWN-PHRDLMLKTYGGHANEVLDA--AGSCDSSHIVS 73
+ V FN DG LS D+++ LW+ + L GH N + A D IV+
Sbjct: 58 VNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVT 117
Query: 74 ASVDKSV 80
++ DK V
Sbjct: 118 SAADKQV 124
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 55 HANEVLDAAGSCDSSHIVSASVDKSVILWDVTTA 88
H V + + D ++S S D+ VILWD TA
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTA 87
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 33.9 bits (74), Expect = 0.040
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 70 HIVSASVDKSVILWDVTTAQ-PLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
H+++ D S++LWD+ A+ PL + H+ V + +SG D+ +
Sbjct: 233 HVLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGISGGADDKI 286
Score = 30.7 bits (66), Expect = 0.37
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS 69
I + + VDG + G D +I+++N + L H + S D
Sbjct: 304 ITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCE 363
Query: 70 HIVSASVDKSVILW 83
+ SAS D +V LW
Sbjct: 364 LMASASEDATVALW 377
Score = 26.6 bits (56), Expect = 6.0
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHAN-EVLDAAGS 65
LT++K + + + ++ +S GAD KI ++N + T E +G+
Sbjct: 255 LTSVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNLNHSTGSCTIRKEITLERPGVSGT 314
Query: 66 C---DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
D +A D + +++ L ++H ++ + ++ + + S S D TV
Sbjct: 315 SIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATV 374
Query: 123 A 123
A
Sbjct: 375 A 375
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 33.9 bits (74), Expect = 0.040
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 71 IVSASVDKSVILWDVTT--AQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ S D S+ +W+V A L + H S+VTC +E +SGS D T+
Sbjct: 866 LFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTI 919
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 33.5 bits (73), Expect = 0.053
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 4 LKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN-PHRDLMLKTYGGHANEVLDA 62
L+ ++ ++ + V FN +G +S D+++ LW+ ++ L + GHAN V A
Sbjct: 49 LEIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQA 108
Query: 63 --AGSCDSSHIVSASVDKSV 80
D IV+ + D V
Sbjct: 109 KFMPFSDDRTIVTCAADGMV 128
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 33.5 bits (73), Expect = 0.053
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 14 QQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVS 73
++ + A F+ DGT ++ A+ I LWNP ++++L G + + S +V+
Sbjct: 537 KKPMTAAAFSGDGTV-MAVAAENVITLWNPDKNILLSVLGSTLTPITKLCFAGKSEFLVA 595
Query: 74 AS 75
AS
Sbjct: 596 AS 597
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 33.1 bits (72), Expect = 0.070
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 85 VTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+T + ++ RHH V+C+ +ST+ +GS D TV
Sbjct: 1033 LTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTV 1070
Score = 27.5 bits (58), Expect = 3.5
Identities = 20/92 (21%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGA-DKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDS 68
++ Q A++ ++ + +SCG + + + ++++ H + V A + DS
Sbjct: 1000 VELGSQCFAAMQMPLEN-FLVSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADS 1058
Query: 69 SHIVSASVDKSVILWDVTTAQ-PLRRYRH-HA 98
+ + + S D +V++WD+ + P +R R+ HA
Sbjct: 1059 TILATGSYDTTVMVWDILRMRTPEKRVRNTHA 1090
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 32.7 bits (71), Expect = 0.092
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+ S SVDK++ +WD+ T Q + H +VT + ++ +S S+D T+
Sbjct: 325 LYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDK--CLISSSLDGTI 374
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 48 MLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCI 104
M+ GH N++ A S + S S D ++++WD + Q +R A + + I
Sbjct: 179 MVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSLI 235
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 22 FNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVI 81
F V G S DK IK+W+ + T H V C ++S+S+D ++
Sbjct: 318 FVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLL--CWDKCLISSSLDGTIK 375
Query: 82 LWDVTTAQPLR 92
LW + + L+
Sbjct: 376 LWACSENESLK 386
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 32.7 bits (71), Expect = 0.092
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 30 LSCGADKKIKLWNPHR-DLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTA 88
+S D +LW+ ++T+ GH +V D + S D + L+D+ T
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 218
Query: 89 QPLRRYRHHASS----VTCIKFNEESTMAVSGSVDN 120
L+ Y+ H VT I F+ + +G N
Sbjct: 219 HQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASN 254
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRY-----RHHASSVTCIKFN-EESTMAVSGSVDN 120
+ +H++++S D++ ILWDVTT + H + V + + +SGS D+
Sbjct: 106 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDS 165
Query: 121 T 121
T
Sbjct: 166 T 166
Score = 30.3 bits (65), Expect = 0.49
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 67 DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTVASPG 126
+ + IVSAS D +I+W+ T+Q + + V F+ G +D+ +
Sbjct: 14 ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFS 73
Query: 127 TLSVVDK 133
S DK
Sbjct: 74 LSSTADK 80
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 32.7 bits (71), Expect = 0.092
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 19 AVRFNVDGTYCLSCGADKK----IKLWNPHRDLMLKTYGGHANEVLDAAG-SCDSSHIVS 73
++ + DGT SCG K+ I WN + +TY G + + +
Sbjct: 557 SMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVKRTYLGLGKRSVGVVQFDTMKNKFLV 616
Query: 74 ASVDKSVILWDVTTAQPLRRYRHHAS--SVTCIKFNEESTMAVSGSVDNTV 122
A + V WD+ + L S C++ N+E T+ + DN +
Sbjct: 617 AGDEFQVKFWDMDSVDLLSSTAAEGGLPSSPCLRINKEGTLLAVSTTDNGI 667
Score = 32.7 bits (71), Expect = 0.092
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGAD-KKIKLWNPHRDLMLKTYGGHANEV 59
M KT+TT A ++ F+ ++ G D I+++N D + GH V
Sbjct: 873 MMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRV 932
Query: 60 LDAAGSCDSSHIVSASVDKSVILWDV 85
A S + +VS+ D + +W +
Sbjct: 933 TGLAFSNVLNVLVSSGADSQLCVWSM 958
Score = 30.7 bits (66), Expect = 0.37
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 55 HANEVLDAAGSCDSSH--IVSASVDKSVILWDVTTAQPLRRYRHHASSV--TCIKFNEES 110
HA V D A S + +V+ DK++ +WD T L + H + V C E
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENI 522
Query: 111 TMAVSGSVDNTV 122
S +VD +
Sbjct: 523 QFIFSTAVDGKI 534
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS--HIVSASVDKSVILW 83
++CG DK IK+W+ L T+ GH V + I S +VD + W
Sbjct: 482 VTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 32.7 bits (71), Expect = 0.092
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 19 AVRFNVDGTYCLSCGADKK----IKLWNPHRDLMLKTYGGHANEVLDAAG-SCDSSHIVS 73
++ + DGT SCG K+ I WN + +TY G + + +
Sbjct: 557 SMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVKRTYLGLGKRSVGVVQFDTMKNKFLV 616
Query: 74 ASVDKSVILWDVTTAQPLRRYRHHAS--SVTCIKFNEESTMAVSGSVDNTV 122
A + V WD+ + L S C++ N+E T+ + DN +
Sbjct: 617 AGDEFQVKFWDMDSVDLLSSTAAEGGLPSSPCLRINKEGTLLAVSTTDNGI 667
Score = 32.7 bits (71), Expect = 0.092
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGAD-KKIKLWNPHRDLMLKTYGGHANEV 59
M KT+TT A ++ F+ ++ G D I+++N D + GH V
Sbjct: 873 MMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRV 932
Query: 60 LDAAGSCDSSHIVSASVDKSVILWDV 85
A S + +VS+ D + +W +
Sbjct: 933 TGLAFSNVLNVLVSSGADSQLCVWSM 958
Score = 30.7 bits (66), Expect = 0.37
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 55 HANEVLDAAGSCDSSH--IVSASVDKSVILWDVTTAQPLRRYRHHASSV--TCIKFNEES 110
HA V D A S + +V+ DK++ +WD T L + H + V C E
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENI 522
Query: 111 TMAVSGSVDNTV 122
S +VD +
Sbjct: 523 QFIFSTAVDGKI 534
Score = 30.7 bits (66), Expect = 0.37
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS--HIVSASVDKSVILW 83
++CG DK IK+W+ L T+ GH V + I S +VD + W
Sbjct: 482 VTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 32.3 bits (70), Expect = 0.12
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 45 RDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD---VTTAQPLRRYRH----H 97
R +++TY GH EV S + S D V +WD V ++ P R++ H H
Sbjct: 207 RSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEH 266
Query: 98 ASSVTCIKF--NEESTMAVSGSV 118
++V + + + S +A G V
Sbjct: 267 TAAVRALAWCPFQASLLATGGGV 289
Score = 31.5 bits (68), Expect = 0.21
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 37 KIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQP 90
++ LW + + GH + VL A S D + SA+ D+++ LW+V P
Sbjct: 336 QLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPP 389
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 32.3 bits (70), Expect = 0.12
Identities = 13/58 (22%), Positives = 31/58 (53%)
Query: 60 LDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGS 117
++A + D +++S S D ++ W++ + R+ ++ V+C+K+ M V+ S
Sbjct: 248 IEATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAAS 305
Score = 29.9 bits (64), Expect = 0.65
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 48 MLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDV 85
+L+ + GH + V+ S + +S S+D+SV LWD+
Sbjct: 106 ILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDL 143
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 32.3 bits (70), Expect = 0.12
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+VS S+D V +W++ + ++ + H VT + + E VS SVD T+
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNED--IVSSSVDQTL 135
Score = 31.9 bits (69), Expect = 0.16
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQ 89
+S D + +WN ++T GH +V A D+ IVS+SVD+++ W Q
Sbjct: 87 VSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW--RNGQ 142
Query: 90 PLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
+ + H S + + S VSGS D
Sbjct: 143 LVESWDAHQSPIQAV-IRLPSGELVSGSSD 171
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 32.3 bits (70), Expect = 0.12
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 71 IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
+VS S+D V +W++ + ++ + H VT + + E VS SVD T+
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNED--IVSSSVDQTL 135
Score = 31.9 bits (69), Expect = 0.16
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 30 LSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQ 89
+S D + +WN ++T GH +V A D+ IVS+SVD+++ W Q
Sbjct: 87 VSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW--RNGQ 142
Query: 90 PLRRYRHHASSVTCIKFNEESTMAVSGSVD 119
+ + H S + + S VSGS D
Sbjct: 143 LVESWDAHQSPIQAV-IRLPSGELVSGSSD 171
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 32.3 bits (70), Expect = 0.12
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 24/132 (18%)
Query: 12 CNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEV-----------L 60
CN+ + V + G +S GA + ++ P +L T GH V
Sbjct: 18 CNR-VVNNVSWGASGL--VSFGAQNAVAVFCPKTAQILTTLPGHKASVNCTHWLPTSKFA 74
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRH-------HASSVTCI---KFNEES 110
A D +++S D +ILW+++T +++RH H VTCI +E
Sbjct: 75 FKAKKLDRQYLLSGDSDGIIILWELSTLNNDQQWRHVLQLPLSHKKGVTCITAYMVSETD 134
Query: 111 TMAVSGSVDNTV 122
M S S D V
Sbjct: 135 AMFASASSDGVV 146
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 31.9 bits (69), Expect = 0.16
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 45 RDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVT------TAQPLRRYRHHA 98
R ++ TY GH EV S + S D V +WD + T Q L R+ H
Sbjct: 225 RSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHT 284
Query: 99 SSVTCIKF--NEESTMAVSGSV 118
++V + + + S +A G V
Sbjct: 285 AAVRALAWCPFQASLLATGGGV 306
Score = 31.5 bits (68), Expect = 0.21
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 37 KIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQP 90
++ LW + + GH + VL A S D + SA+ D+++ LW+V P
Sbjct: 353 QLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPP 406
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 31.5 bits (68), Expect = 0.21
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 38 IKLWNPHRDLM--LKTYGGHANEVLDAAGSC--DSSHIVSASVDKSVILWDVTTAQ 89
+KLW+ R++M ++ + GH V+ A C DSS++++ + D I WD TA+
Sbjct: 244 LKLWDM-RNIMSPVREFTGHQRGVI-AMEWCPSDSSYLLTCAKDNRTICWDTNTAE 297
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 31.5 bits (68), Expect = 0.21
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 38 IKLWNPHRDLM--LKTYGGHANEVLDAAGSC--DSSHIVSASVDKSVILWDVTTAQ 89
+KLW+ R++M ++ + GH V+ A C DSS++++ + D I WD TA+
Sbjct: 244 LKLWDM-RNIMSPVREFTGHQRGVI-AMEWCPSDSSYLLTCAKDNRTICWDTNTAE 297
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 31.5 bits (68), Expect = 0.21
Identities = 22/114 (19%), Positives = 45/114 (39%)
Query: 10 IKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSS 69
++ ++++ RAVRF DG ++ AD I + + + ++ + +
Sbjct: 47 VRAHKESCRAVRFIDDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTET 106
Query: 70 HIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTVA 123
I S V +WD + H ++ + F +S V S D T++
Sbjct: 107 TIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLS 160
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 31.1 bits (67), Expect = 0.28
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 33 GADKKIKLWNPHR---DLMLKTYGGHANEVLDAAGSCDS-SHIVSASVDKSVILWDVTTA 88
G+D +++W+P + + + H++ + S H++SAS D ++LWD+ TA
Sbjct: 332 GSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTA 391
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.1 bits (67), Expect = 0.28
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCD-SSHIVSAS 75
I +RF+ + + L DK+++L++ + LK H VLD D S V A
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTN-SLKGEFLHGGAVLDCCFHDDFSGFSVGAD 78
Query: 76 VDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
I+++V L H +V C++++ + ++GS D TV
Sbjct: 79 YKVRRIVFNVGKEDILGT---HDKAVRCVEYSYAAGQVITGSWDKTV 122
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 31.1 bits (67), Expect = 0.28
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 9/132 (6%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN--PHRDLMLKTYGGHANEV 59
G L TL + + ++ DG Y LS G+ +I+LW+ R+ ++ G
Sbjct: 300 GMLSTLDRATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQ-- 357
Query: 60 LDAAGSCDSSH---IVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSG 116
D A D+S +V K+V + + + + R H SV FN +
Sbjct: 358 TDRAIQLDTSDDPALVFVPCMKTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTS 417
Query: 117 SVDNTVA--SPG 126
D + SPG
Sbjct: 418 GADRQIIVWSPG 429
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 30.7 bits (66), Expect = 0.37
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 45 RDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVT------TAQPLRRYRHHA 98
R +++TY GH EV S + S D V +WD + T Q L R+ H
Sbjct: 241 RSSIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHT 300
Query: 99 SSVTCIKF--NEESTMAVSGSV 118
++V + + + S +A G V
Sbjct: 301 AAVRALAWCPFQASLLATGGGV 322
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 37 KIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQP 90
++ LW + GH + VL A S + + SA+ D+++ LW+V P
Sbjct: 369 QLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPP 422
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 30.7 bits (66), Expect = 0.37
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN-PHRDLMLKTYGGHANEVL 60
GD + I+ V FN G+ + AD +W+ R + + + +
Sbjct: 11 GDFPEVIEEYLEHGVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAI 70
Query: 61 DAAGSCDSSH-IVSASVDKSVILWDVTTAQPLRR 93
+ H ++ ++ DKS+ LWDV+T + + R
Sbjct: 71 TSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIAR 104
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 30.7 bits (66), Expect = 0.37
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 53 GGHANEVLDAAGSCD--SSHIVSASVDKSVILWDVTTAQPLRRYRHH 97
G H EV D + C ++ +VS+SVD ++ +W AQPL R H
Sbjct: 318 GKHDGEVTDLS-MCQWMTTRLVSSSVDGTIKIWQDRKAQPLVVLRPH 363
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 30.7 bits (66), Expect = 0.37
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 53 GGHANEVLDAAGSCD--SSHIVSASVDKSVILWDVTTAQPLRRYRHH 97
G H EV D + C ++ +VS+SVD ++ +W AQPL R H
Sbjct: 353 GKHDGEVTDLS-MCQWMTTRLVSSSVDGTIKIWQDRKAQPLVVLRPH 398
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 30.7 bits (66), Expect = 0.37
Identities = 19/79 (24%), Positives = 31/79 (39%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV 72
+ Q + + DGT S G DK+ K+W T H + A + +
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLA 130
Query: 73 SASVDKSVILWDVTTAQPL 91
+ S DK++ WD P+
Sbjct: 131 TGSWDKTLKYWDTRQQNPV 149
>At1g22770.1 68414.m02845 gigantea protein (GI) identical to
gigantea protein SP:Q9SQI2 from [Arabidopsis thaliana]
Length = 1173
Score = 30.3 bits (65), Expect = 0.49
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 76 VDKSVILWDVTTAQPLRRYRHHA----SSVTCIKFNEESTMAVSGSVDNTVASPGTLSVV 131
V V+ V A+PL Y + SVTC+ + +E+T A + D V S +
Sbjct: 786 VHSKVVASIVDKAEPLEAYLKNTPVQKDSVTCLNWKQENTCASTTCFDTAVTSASRTEMN 845
Query: 132 DKSRYKF 138
+ +K+
Sbjct: 846 PRGNHKY 852
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 29.9 bits (64), Expect = 0.65
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 22 FNVDGTYCLSCGADKK----IKLWNPHRDLMLKTYGGHANEVLDAAG-SCDSSHIVSASV 76
++ DGT SCG K + WN + +TY ++ +H ++
Sbjct: 547 YSADGTRLFSCGTSKDGDSFLVEWNESEGSIKRTYKEFQKKLAGVVQFDTSKNHFLAVGE 606
Query: 77 DKSVILWDVTTAQPLRRYRHHAS--SVTCIKFNEESTMAVSGSVDN 120
D + WD+ L ++ ++FN++ + + DN
Sbjct: 607 DGQIKFWDMNNINVLTSTDAEGGLPALPHLRFNKDGNLLAVTTADN 652
Score = 29.9 bits (64), Expect = 0.65
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGA-DKKIKLWNPHRDLMLKTYGGHANEV 59
M K +TT A + F+ ++ G D I ++N D + GH +
Sbjct: 848 MMTFKVMTTFMPPPPASTFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRI 907
Query: 60 LDAAGSCDSSHIVSASVDKSVILWDVTT 87
A S + +VS+ D + W + T
Sbjct: 908 TGLAFSTALNILVSSGADAQICFWSIDT 935
Score = 27.9 bits (59), Expect = 2.6
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 3 DLKTLTTIKCNQQAIRAVRF-NVDGTYC-LSCGADKKIKLWNPHRDLMLKTYGGHANEVL 60
DL+ T I + A+ + F N + C ++CG DK IK+W+ T+ GH V
Sbjct: 441 DLRQHTEIDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHF-TFEGHDAPVY 499
Query: 61 DAAGSCDSS--HIVSASVDKSVILW 83
+ I S ++D + W
Sbjct: 500 SICPHYKENIQFIFSTAIDGKIKAW 524
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 29.9 bits (64), Expect = 0.65
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 25 DGTYCLSCGA-DKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILW 83
+GT L G+ D + +WN +++ GH +E+L + + ++S D+++ L+
Sbjct: 273 EGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELL-SIDALGRERVLSVGRDRTMQLY 331
Query: 84 DVTTAQPLRR---YRHHASSVTCIKFNEESTMAVSGSVDNTVA 123
V P YR S+ C F S +SGS + ++A
Sbjct: 332 KVGIVVPESTRLIYRASESNFECCCF-VNSDEFLSGSDNGSIA 373
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.9 bits (64), Expect = 0.65
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQ 89
GH + S D S IVS S D+S +W++ + +
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQE 268
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.9 bits (64), Expect = 0.65
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQ 89
GH + S D S IVS S D+S +W++ + +
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQE 268
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.9 bits (64), Expect = 0.65
Identities = 19/90 (21%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 12 CNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDL-MLKTYGGHA-----NEVLDAAGS 65
C A+ +V+F +G L+ GAD ++++++ +R ++ H + D A
Sbjct: 477 CGSAAVTSVKFACNGRKMLTSGAD-RLQMFDVNRKASSVRLSPSHTQTLSHGTIYDVAVD 535
Query: 66 CDSSHIVSASVDKSVILWDVTTAQPLRRYR 95
S +V+ DK + ++D+ + + +R ++
Sbjct: 536 PTSGLVVTVGQDKKINIFDIESGKLVRSFK 565
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 29.9 bits (64), Expect = 0.65
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 55 HANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAV 114
HA+ V + + + + SAS D+++ +W + ++ L H +V + E+ +
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEA-IVF 263
Query: 115 SGSVDNTV 122
SGS D TV
Sbjct: 264 SGSADGTV 271
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 29.5 bits (63), Expect = 0.86
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN 42
T+K N ++R++ F+ DG + LS G D ++ +W+
Sbjct: 370 TLKMNG-SVRSLAFSEDGKHLLSSGGDGQVYVWD 402
Score = 26.2 bits (55), Expect = 8.0
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 59 VLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
V A S D H++S+ D V +WD+ T + L Y+ TC +++G++
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCL--YKGVDEGSTC---GTSLCSSLNGAL 431
Query: 119 DNTVASPGTLSVVDKSRY 136
+ G +++ KS +
Sbjct: 432 FASGTDRGIVNIYKKSEF 449
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/94 (19%), Positives = 44/94 (46%)
Query: 14 QQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVS 73
Q +I ++ F+ DG + + G D +++++ ++ + +L + S D +I++
Sbjct: 303 QGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILT 362
Query: 74 ASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFN 107
D V +W + + + H S V+ + F+
Sbjct: 363 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 396
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 29.5 bits (63), Expect = 0.86
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 3 DLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDA 62
DLK T K ++A+ D + D KI++W + + GG++
Sbjct: 165 DLKDHTGFKSTSGLVKAIVITGDNRI-FTGHQDGKIRVWRGSK----RRTGGYSR----- 214
Query: 63 AGSCDS-SHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
GS + ++ SV+ + +V + + + RH+ +V+C+ NEE + SGS D T
Sbjct: 215 IGSLPTLKEFLTKSVNPKNYV-EVRRRKNVLKIRHY-DAVSCLSLNEELGLLYSGSWDKT 272
Query: 122 V 122
+
Sbjct: 273 L 273
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 53 GGHANEVLDAAGSCD--SSHIVSASVDKSVILWDVTTAQPLRRYRHH 97
G H EV D + C ++ +VS+SVD +V +W QPL R H
Sbjct: 337 GKHDGEVTDLS-MCQWMTTRLVSSSVDGTVKIWQDRKTQPLVVLRPH 382
>At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repeats
(PF00400) (1 weak) submitForm();
Length = 927
Score = 29.5 bits (63), Expect = 0.86
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 69 SHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
SH + V +VI+ D + + ++R H S ++ + F+ T+ V+ S+
Sbjct: 352 SHSAESDVVGTVIVKDFESRAIIAQFRAHTSPISALCFDPSGTLLVTASI 401
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 48 MLKTYGGHANEVLDAAGSC----DSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTC 103
M + Y GH N D + +I S S D +W+ T + ++ S + C
Sbjct: 609 MKRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNC 668
Query: 104 IKFNEESTMAVSGSVDNTV 122
I+ + ++ + +DNT+
Sbjct: 669 IQCHPFDSVVATSGIDNTI 687
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 29.1 bits (62), Expect = 1.1
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Query: 13 NQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTY-GGHANEVLDA--AGSCDSS 69
++ + AV FN G +S D++I LWN +Y GH V D
Sbjct: 54 HEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDR 113
Query: 70 HIVSASVDKSVILWDVT---TAQPLRRYRHH 97
I+++ D V L + + R RHH
Sbjct: 114 TIITSGADGQVRLGQILENGKVETKRLGRHH 144
Score = 26.2 bits (55), Expect = 8.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 31 SCGADKKIKLWNP 43
SCG +K +KLW P
Sbjct: 380 SCGIEKSVKLWTP 392
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 29.1 bits (62), Expect = 1.1
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 11/108 (10%)
Query: 9 TIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHR--------DLMLKTYGGHANEVL 60
T+ +++A+ V+F +D +S D +KLWN ++ TY GH N+
Sbjct: 889 TLAGHEKAVSYVKF-MDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKN 947
Query: 61 DAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNE 108
S +I S V + + P+ Y+ SV I NE
Sbjct: 948 FVGLSVLDGYIACGSETNEVYSYYKSLPMPMTSYKF--GSVDPISGNE 993
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 29.1 bits (62), Expect = 1.1
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 6 TLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHR--DLMLKTYGGHANEVLDAA 63
T+ TI + ++ ++ + +S G D+KIK W+ + L+ T G A + +
Sbjct: 86 TVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRESLVFSTDAGGAVGCVTVS 145
Query: 64 GSCDSSHIVSASVDKSVILWDVTTA-QPLRRYRHHAS-SVTCIKFNEESTMAVSGSVDNT 121
G +++V VD S+ ++D+ + + Y + CI S GSVD
Sbjct: 146 G----NNLV-VCVDASMHIYDLRNLDEAFQSYASQVEVPIRCITSVPYSRGYAVGSVDGR 200
Query: 122 VA--SPGTLSVVDKSRYKF 138
VA P T S + +Y F
Sbjct: 201 VAVDFPNT-SCSSEIKYSF 218
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 29.1 bits (62), Expect = 1.1
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 6 TLTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWNPHR--DLMLKTYGGHANEVLDAA 63
T+ TI + ++ ++ + +S G D+KIK W+ + L+ T G A + +
Sbjct: 86 TVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRESLVFSTDAGGAVGCVTVS 145
Query: 64 GSCDSSHIVSASVDKSVILWDVTTA-QPLRRYRHHAS-SVTCIKFNEESTMAVSGSVDNT 121
G +++V VD S+ ++D+ + + Y + CI S GSVD
Sbjct: 146 G----NNLV-VCVDASMHIYDLRNLDEAFQSYASQVEVPIRCITSVPYSRGYAVGSVDGR 200
Query: 122 VA--SPGTLSVVDKSRYKF 138
VA P T S + +Y F
Sbjct: 201 VAVDFPNT-SCSSEIKYSF 218
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 29.1 bits (62), Expect = 1.1
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 19 AVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV-SASVD 77
A F+ DG S D +K+ + LK GH S IV S S+D
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLD 167
Query: 78 KSVILWDVTTAQPLRRY 94
V LW+ T + +R +
Sbjct: 168 HEVRLWNAKTGECIRTH 184
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 29.1 bits (62), Expect = 1.1
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 19 AVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIV-SASVD 77
A F+ DG S D +K+ + LK GH S IV S S+D
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLD 167
Query: 78 KSVILWDVTTAQPLRRY 94
V LW+ T + +R +
Sbjct: 168 HEVRLWNAKTGECIRTH 184
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/36 (27%), Positives = 22/36 (61%)
Query: 7 LTTIKCNQQAIRAVRFNVDGTYCLSCGADKKIKLWN 42
L ++C+ + +V F+ +G + G ++KIK+W+
Sbjct: 274 LVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWD 309
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 68 SSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
++ + S S+DK++ +W + Q ++ H+S V + ++ +S S+DNTV
Sbjct: 284 ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQ--FLLSCSLDNTV 336
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 37 KIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQP 90
++ LW + GH + VL A S + + SA+ D+++ LW+V P
Sbjct: 367 QLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPP 420
Score = 27.1 bits (57), Expect = 4.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 45 RDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD---VTTAQPLRRYRH 96
R ++ TY GH EV S + S V +WD V +++P R++ H
Sbjct: 238 RSSIVGTYLGHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLH 292
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 28.3 bits (60), Expect = 2.0
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
I A F+ DG+ CL+ A I +W+P ++ +L G AN + +++AS
Sbjct: 512 ITAAVFSGDGS-CLALAAKTVITIWHPLKNELLYVV-GKANAPIMELSFTGGGFLIAASH 569
Query: 77 DKS--VILWDVTT 87
+ + +WD+ T
Sbjct: 570 GSTPHLSVWDLMT 582
>At1g26330.1 68414.m03211 hypothetical protein
Length = 1196
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 53 GGHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPL-RRYRHHASSVTCIKFNEEST 111
G + D AG+ S H V+ ++D V +WD++T L + V+CI ++
Sbjct: 1120 GSQLDPRADVAGTI-SGHGVAGTLDGLVYMWDLSTGTKLGSLHDFKGQRVSCISTDDSRN 1178
Query: 112 MAVS 115
+ ++
Sbjct: 1179 ICIA 1182
>At3g47350.1 68416.m05148 short-chain dehydrogenase/reductase (SDR)
family protein similar to sterol-binding dehydrogenase
steroleosin GI:15824408 from [Sesamum indicum]
Length = 308
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 75 SVDKSVILWDVTTAQPLRRYR-HHASSVTCIKFNEESTMAVSGSVDNTVASPGTLS 129
S K V++ T PL+ + AS +KF E + +S + T+A PG +S
Sbjct: 174 SKGKIVVISSATAIIPLQAASVYSASKAALVKFFETLRVEISPDIKITIALPGFIS 229
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 55 HANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAV 114
H++ V + + D + SAS D++V +W + + + + H +V + E ++
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAE--SLVF 191
Query: 115 SGSVDNTV 122
+GS D TV
Sbjct: 192 TGSADGTV 199
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 27.9 bits (59), Expect = 2.6
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 2 GDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGADK-KIKLW---NPHR-DLMLKTYGGH- 55
G++ + + ++ +R + FNV L+ GAD + +W NP + LK G +
Sbjct: 103 GEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYM 162
Query: 56 ANEVLDAAGSCDSSHIV-SASVDKSVILWDV 85
+E+ + + H++ S S + + ++WDV
Sbjct: 163 QSEISSLSWNKGFQHVLASTSHNGTTVIWDV 193
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 27.5 bits (58), Expect = 3.5
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 21 RFNVDGTYCLSCGADKKIKLWNPHRDLMLKTY-GGHANEVLDAAGSCDSSHIVSASVDKS 79
+F VDG C + + W+ L T GH V A S + +AS D++
Sbjct: 109 KFWVDGN-CPYGDKCRYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDET 167
Query: 80 VILWDVTTAQ 89
V +WD + Q
Sbjct: 168 VRIWDCASGQ 177
Score = 26.2 bits (55), Expect = 8.0
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 68 SSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTV 122
++ + S ++D S+ +W + Q ++ H S V + ++ +S S+DNTV
Sbjct: 277 ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWDQ--FLLSCSLDNTV 329
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 27.5 bits (58), Expect = 3.5
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 55 HANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSV-TCIKFNEESTMA 113
H N + D + S +++AS D+++ +WDV + H +V + S +
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 114 VSGSVDNTVA 123
VSGS D A
Sbjct: 187 VSGSRDGCFA 196
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/73 (19%), Positives = 29/73 (39%)
Query: 17 IRAVRFNVDGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASV 76
I A+ + + D W+ + T+ GH++ + +S I++ S
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 77 DKSVILWDVTTAQ 89
D + +WD T +
Sbjct: 222 DGTARIWDCKTGK 234
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 68 SSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNT 121
S + +A+ D WDV + + ++ H+ + + ++ ++GS D T
Sbjct: 171 SGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGT 224
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 27.1 bits (57), Expect = 4.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 54 GHANEVLDAAGSCDSSHIVSASVDKSVILWDVTTAQPLRRYRHHASSVTCIKFNEESTMA 113
GH + A D + I S S D SV +WD ++ + ++ R H+ V + +E + +
Sbjct: 255 GHEGPITSLA--LDMTSIFSGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLAPHETTLAS 311
Query: 114 VSGS 117
SGS
Sbjct: 312 TSGS 315
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 54 GHANEVLDAAGSCDSS-HIVSASVDKSVILWDV 85
GH ++ A C + ++S DKSVILW++
Sbjct: 206 GHQDDAEFALAMCPTEPFVLSGGKDKSVILWNI 238
>At5g54730.1 68418.m06815 expressed protein
Length = 763
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 80 VILWDVTTAQPLRRYRHHASSVTCIKFNEESTMAVSGSV 118
VI+ D+T + +++ H S ++ + F++ + V+ S+
Sbjct: 329 VIVKDITNKSVITQFKAHKSPISALCFDQSGLLLVTASI 367
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 68 SSHIVSASVDKSVILWDVTT 87
SSHI SA D ++WD+++
Sbjct: 280 SSHICSAGDDSQALIWDISS 299
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 26.6 bits (56), Expect = 6.0
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 1 MGDLKTLTTIKCNQQAIRAVRFNVDGTYCLSCGA-DKKIKLWNPHRDLMLKTYGGHANEV 59
M K +TT A + F+ ++ G D I ++N D + GH +
Sbjct: 859 MMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHI 918
Query: 60 LDAAGSCDSSHIVSASVDKSVILW 83
A S + +VS+ D + W
Sbjct: 919 TGLAFSTALNILVSSGADAQLFFW 942
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 26.6 bits (56), Expect = 6.0
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Query: 25 DGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD 84
DG G + + L +P+ L T GH + +A D + + DK+ +WD
Sbjct: 286 DGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWD 345
Query: 85 V-TTAQPLRRYRHHASSVTCIKFNEEST-MAVSGSVD 119
+ ++ + R + ++ I++ + MA++ D
Sbjct: 346 IRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPAD 382
>At5g15680.1 68418.m01834 expressed protein
Length = 2151
Score = 26.2 bits (55), Expect = 8.0
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 29 CLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDS--SHIVSAS-VDKSVILWDV 85
C+ C A + P L K + G N V D + D S + S VD +L D+
Sbjct: 92 CIFCSACIRFVECCPQEGLTEKLWSGLENFVFDWLINADRVVSQVEYPSLVDLRGLLLDL 151
Query: 86 TTAQPLRRYRHHASSVTCIKFNEESTMAVSGSVDNTVASPGTLSVVDKSRY 136
AQ L SSVT F E +T + D +VA TLS+++ RY
Sbjct: 152 V-AQLLGALSR-ISSVTERFFMELNTRRI----DTSVARSETLSIINGMRY 196
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 26.2 bits (55), Expect = 8.0
Identities = 19/97 (19%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 25 DGTYCLSCGADKKIKLWNPHRDLMLKTYGGHANEVLDAAGSCDSSHIVSASVDKSVILWD 84
DG G + + + +P+ L+T GH + +A D + + DK+ +WD
Sbjct: 288 DGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWD 347
Query: 85 V-TTAQPLRRYRHHASSVTCIKFNEEST-MAVSGSVD 119
+ +Q + + + ++ I++ + MA++ D
Sbjct: 348 IRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPAD 384
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 5 KTLTTIKCNQQAIRAVRFNVDGTY 28
+++T +K N AIR++R+ DG Y
Sbjct: 353 QSVTVLKGNLGAIRSIRYTSDGKY 376
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 26.2 bits (55), Expect = 8.0
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 42 NPHRDLMLKTYGGHANEVLDAAGSCDSS-HIVSASVDKSVILWDV 85
N DL+L GH + A C + ++S DKSV+LW +
Sbjct: 208 NSRPDLILT---GHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSI 249
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 97 HASSVTCIKFNEESTMAVSGSVDNTV 122
H +V+C+ NE+ + SGS D T+
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTL 269
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.129 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,181,459
Number of Sequences: 28952
Number of extensions: 115576
Number of successful extensions: 1129
Number of sequences better than 10.0: 202
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 374
Number of HSP's gapped (non-prelim): 658
length of query: 138
length of database: 12,070,560
effective HSP length: 74
effective length of query: 64
effective length of database: 9,928,112
effective search space: 635399168
effective search space used: 635399168
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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