Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001785-TA|BGIBMGA001785-PA|IPR007087|Zinc finger,
C2H2-type
(93 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 41 1e-04
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 31 0.11
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 31 0.11
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 31 0.14
At3g25750.1 68416.m03206 F-box family protein contains F-box dom... 30 0.25
At3g23310.1 68416.m02940 protein kinase, putative contains prote... 29 0.33
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 29 0.33
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 29 0.43
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 29 0.43
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 29 0.57
At4g14350.2 68417.m02211 protein kinase family protein contains ... 28 0.75
At4g14350.1 68417.m02210 protein kinase family protein contains ... 28 0.75
At2g20470.1 68415.m02390 protein kinase, putative contains prote... 28 0.75
At3g62850.1 68416.m07061 zinc finger protein-related contains Pf... 28 1.00
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 28 1.00
At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein ... 28 1.00
At5g59920.1 68418.m07514 DC1 domain-containing protein contains ... 27 1.7
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 27 1.7
At3g42860.1 68416.m04491 zinc knuckle (CCHC-type) family protein... 27 1.7
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 27 1.7
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 27 1.7
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 27 1.7
At3g28650.1 68416.m03576 DC1 domain-containing protein similar ... 27 2.3
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 27 2.3
At1g30640.1 68414.m03747 protein kinase, putative contains prote... 26 3.0
At1g03920.1 68414.m00377 protein kinase, putative contains prote... 26 3.0
At5g26610.2 68418.m03181 D111/G-patch domain-containing protein ... 26 4.0
At5g26610.1 68418.m03180 D111/G-patch domain-containing protein ... 26 4.0
At4g33080.1 68417.m05678 protein kinase, putative contains prote... 26 4.0
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 26 4.0
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 26 4.0
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 26 4.0
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 26 4.0
At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein ... 25 5.3
At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /... 25 5.3
At3g52490.1 68416.m05772 heat shock protein-related contains sim... 25 5.3
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 25 5.3
At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal hydrolase-r... 25 5.3
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 25 7.0
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 25 7.0
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 25 7.0
At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein ... 25 7.0
At4g12750.1 68417.m02002 expressed protein 25 7.0
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 25 7.0
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 25 7.0
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 25 7.0
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 25 7.0
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 25 7.0
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 25 7.0
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 25 9.3
At3g27490.1 68416.m03437 DC1 domain-containing protein contains ... 25 9.3
At3g26230.1 68416.m03272 cytochrome P450 family protein contains... 25 9.3
At2g44400.1 68415.m05522 DC1 domain-containing protein similar ... 25 9.3
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 41.1 bits (92), Expect = 1e-04
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 17 LLFRSAVHELKNNFPCSV--CQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSVC 74
L+ VH+ + F CS C F+W+ + H +H + + CG+ F+ V
Sbjct: 1255 LVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTG-ERPYICKVDGCGLSFRFVS 1313
Query: 75 SFQRHMKNSLKHVT 88
+ RH + ++ +VT
Sbjct: 1314 DYSRHRRKTMHYVT 1327
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 20 RSAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCE--SCGIGFKSVCSFQ 77
+S + + C +C KN +KRH H + CE C F + Q
Sbjct: 265 KSHIRSCHQHINCEICGSKHLKKN-IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQ 323
Query: 78 RHMK 81
+HMK
Sbjct: 324 KHMK 327
Score = 30.7 bits (66), Expect = 0.14
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 35 CQKVFRWKNSLKRHTEVHLAKDTTEAAYCE-SCGIGFKSVCSFQRHMKNSLKHV 87
C K F++ + L++H + H+ D+ EA E C F + + H+++ +H+
Sbjct: 222 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHI 275
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 20 RSAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCE--SCGIGFKSVCSFQ 77
+S + + C +C KN +KRH H + CE C F + Q
Sbjct: 177 KSHIRSCHQHINCEICGSKHLKKN-IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQ 235
Query: 78 RHMK 81
+HMK
Sbjct: 236 KHMK 239
Score = 30.7 bits (66), Expect = 0.14
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 35 CQKVFRWKNSLKRHTEVHLAKDTTEAAYCE-SCGIGFKSVCSFQRHMKNSLKHV 87
C K F++ + L++H + H+ D+ EA E C F + + H+++ +H+
Sbjct: 134 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHI 187
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 30.7 bits (66), Expect = 0.14
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 31 PCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSVCSFQRHMKNS 83
P C+ F+W S H VH A CG F+ V F RH + +
Sbjct: 1293 PWKGCKMTFKWAWSRTEHIRVHTGARPYVCAE-PDCGQTFRFVSDFSRHKRKT 1344
>At3g25750.1 68416.m03206 F-box family protein contains F-box domain
Pfam:PF00646
Length = 348
Score = 29.9 bits (64), Expect = 0.25
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 23 VHEL---KNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSVCS-FQR 78
VHEL +N+ +V KV++ L + EV D T C SC F V S +
Sbjct: 241 VHELSITRNHIQRTVGFKVYKMDEDLAKWVEVSCLGDNTLIVACNSC---FTVVASEYHG 297
Query: 79 HMKNSLKHVTHDQRK 93
+KNS+ +D +K
Sbjct: 298 CLKNSIYFSYYDVKK 312
>At3g23310.1 68416.m02940 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 568
Score = 29.5 bits (63), Expect = 0.33
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 31 PCSVCQKVFRWKNSLKRHTEVHLAKDTTE 59
P + C+K+ WKN LK EV L+ + +
Sbjct: 366 PMTTCRKIVNWKNYLKFPDEVRLSPEAKD 394
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 29.5 bits (63), Expect = 0.33
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 30 FPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSVCSFQRHMK 81
F C +C K F K + H K+ + YC SCG FK S + H+K
Sbjct: 262 FACRMCGKAFAVKGDWRTH-----EKNCGKLWYC-SCGSDFKHKRSLKDHVK 307
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.1 bits (62), Expect = 0.43
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 7 NLPSASYQTRLLFRSAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAA 61
NLP SY+ L + + +F C++C K F+ +L+ H H + T AA
Sbjct: 222 NLPPGSYEILQLEKEEILAPHTHF-CTICGKGFKRDANLRMHMRGHGDEYKTAAA 275
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.1 bits (62), Expect = 0.43
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 7 NLPSASYQTRLLFRSAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAA 61
NLP SY+ L + + +F C++C K F+ +L+ H H + T AA
Sbjct: 222 NLPPGSYEILQLEKEEILAPHTHF-CTICGKGFKRDANLRMHMRGHGDEYKTAAA 275
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 28.7 bits (61), Expect = 0.57
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 18 LFRSAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCE 64
L R + ++++ CS+C+K F +L H +H K + Y E
Sbjct: 433 LRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIE 479
Score = 25.4 bits (53), Expect = 5.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 30 FPCSVCQKVFRWKNSLKRHTEVH 52
+ C VC K+F L HT++H
Sbjct: 98 YECKVCGKIFGCYRGLGGHTKLH 120
>At4g14350.2 68417.m02211 protein kinase family protein contains
similarity to Swiss-Prot:O13310 serine/threonine-protein
kinase orb6 [Schizosaccharomyces pombe]
Length = 551
Score = 28.3 bits (60), Expect = 0.75
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 31 PCSVCQKVFRWKNSLKRHTEVHLAKDTTE 59
P + C+K+ W+N LK EV L+ + +
Sbjct: 363 PMTTCRKIVNWRNYLKFPDEVRLSPEAKD 391
>At4g14350.1 68417.m02210 protein kinase family protein contains
similarity to Swiss-Prot:O13310 serine/threonine-protein
kinase orb6 [Schizosaccharomyces pombe]
Length = 551
Score = 28.3 bits (60), Expect = 0.75
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 31 PCSVCQKVFRWKNSLKRHTEVHLAKDTTE 59
P + C+K+ W+N LK EV L+ + +
Sbjct: 363 PMTTCRKIVNWRNYLKFPDEVRLSPEAKD 391
>At2g20470.1 68415.m02390 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 596
Score = 28.3 bits (60), Expect = 0.75
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 31 PCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGI 68
P S C+K+ WK+ LK E L+++ + C +
Sbjct: 366 PMSTCRKIVNWKSHLKFPEEAILSREAKDLINSLLCSV 403
>At3g62850.1 68416.m07061 zinc finger protein-related contains Pfam
profiles PF04396: Protein of unknown function DUF537,
weak hit to PF00096: Zinc finger, C2H2 type
Length = 472
Score = 27.9 bits (59), Expect = 1.00
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 41 WKNSLKRHTEVHLAK-----DTTEAAYCESCGIGFKSVCSFQRHM---KNSLKHVTH 89
W+N L+ E K + + YC+SC +SV F+RH+ K+++K VT+
Sbjct: 156 WRNLLETKREFVQDKCSSSCEVSPMFYCKSCSYQGQSVEGFRRHVSSGKHAVKEVTN 212
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 27.9 bits (59), Expect = 1.00
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 38 VFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSVCSFQRHMKNSLKHVTHDQRK 93
+ R N + + + +KD C CG F SV S H++ TH++ K
Sbjct: 190 ISRLGNDISQKLQFSSSKDNGIVEVCPQCGAKFSSVTSLVEHVEK-----THERNK 240
>At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein
weak similarity to S-locus protein 4 (GI:6069478)
[Brassica rapa]; weak similarity to Pre-mRNA cleavage
complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913)
[Homo sapiens]; contains Prosite PS00028: Zinc finger,
C2H2 type, domain
Length = 828
Score = 27.9 bits (59), Expect = 1.00
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 16 RLLFRSAVHELKNNFP--CSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSV 73
R L S + L ++ P C+ C + K L RH E+H K + C + F V
Sbjct: 663 RELHPSVISSLFDDLPHLCTSCSVRLKQKEELDRHMELHDKKKLELSGTNSKCRVWFPKV 722
>At5g59920.1 68418.m07514 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 27.1 bits (57), Expect = 1.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 53 LAKDTTEAAYCESCGI 68
L K+TTE +CE CGI
Sbjct: 438 LMKETTEITHCELCGI 453
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 27.1 bits (57), Expect = 1.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 62 YCESCGIGFKSVCSFQRHMK 81
YC+ CG GFK + + HM+
Sbjct: 218 YCQICGKGFKRDANLRMHMR 237
>At3g42860.1 68416.m04491 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 372
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 27 KNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCG 67
K PC C K W ++ K T+ A C CG
Sbjct: 234 KTGTPCYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCG 274
>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 214
Score = 27.1 bits (57), Expect = 1.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 29 NFPCSVCQKVFRWKNSLKRHTEVH 52
N+ CS C++ FR +L H VH
Sbjct: 48 NYTCSFCRREFRSAQALGGHMNVH 71
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 29 NFPCSVCQKVFRWKNSLKRHTEVHLAKDTTE 59
N C++C +VF +L H H KD E
Sbjct: 210 NHRCNICSRVFSSGQALGGHMRCHWEKDQEE 240
Score = 25.0 bits (52), Expect = 7.0
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 25 ELKNNFPCSVCQKVFRWKNSLKRHTEVH 52
E++ F C C+KVF +L H H
Sbjct: 143 EVEERFECDGCKKVFGSHQALGGHRATH 170
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 30 FPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCG 67
F CS+C+KVF +L H H K AA E+ G
Sbjct: 193 FKCSICEKVFTSYQALGGHKASHSIK----AAQLENAG 226
>At3g28650.1 68416.m03576 DC1 domain-containing protein similar to
hypothetical protein GI:4204272 from [Arabidopsis
thaliana] contains weak PHD zinc finger motifs contains
weak PHD zinc finger motifs DC1 domain, a divergent
protein kinase C domain of unknown function.
Length = 665
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 53 LAKDTTEAAYCESCGIGFKSVCSFQ 77
L KDT E ++CE+C + S S++
Sbjct: 380 LNKDTEEGSFCEACVLPIDSYTSYK 404
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 23 VHELKNNFPCSVCQKVFRWKNSLKRHTEVH 52
+H F CS+C K F N+++ H H
Sbjct: 173 IHVGPMQFACSICSKTFNRYNNMQMHMWGH 202
>At1g30640.1 68414.m03747 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 562
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 31 PCSVCQKVFRWKNSLKRHTEVHLA---KDTTEAAYCE-SCGIGFKSVCSFQRH 79
P + C+K+ WK LK E L+ KD C +G K V + H
Sbjct: 368 PLATCRKIVNWKTCLKFPDEAKLSIEVKDLIRRLLCNVEQRLGTKGVHEIKAH 420
>At1g03920.1 68414.m00377 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 569
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 31 PCSVCQKVFRWKNSLKRHTEVHLAK 55
P S C+K+ WK LK E L++
Sbjct: 380 PMSTCRKIVNWKTHLKFPEESRLSR 404
>At5g26610.2 68418.m03181 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 301
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 55 KDTTEAAYCESCGIGFKSVCSFQRHMKNSLKHVTHDQR 92
K+ + YCE C +++V F+ H+ +S H H +R
Sbjct: 155 KEIRKVFYCELCSKQYRTVMEFEGHL-SSYDH-NHKKR 190
>At5g26610.1 68418.m03180 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 301
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 55 KDTTEAAYCESCGIGFKSVCSFQRHMKNSLKHVTHDQR 92
K+ + YCE C +++V F+ H+ +S H H +R
Sbjct: 155 KEIRKVFYCELCSKQYRTVMEFEGHL-SSYDH-NHKKR 190
>At4g33080.1 68417.m05678 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 519
Score = 25.8 bits (54), Expect = 4.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 31 PCSVCQKVFRWKNSLK 46
P S C+K+ W+N LK
Sbjct: 346 PISTCRKIVHWRNHLK 361
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C VC K F+ + +L+ H H
Sbjct: 81 NRFICDVCNKGFQREQNLQLHRRGH 105
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C VC K F+ + +L+ H H
Sbjct: 79 NRFICEVCNKGFQREQNLQLHRRGH 103
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C VC K F+ + +L+ H H
Sbjct: 80 NRFLCEVCNKGFQREQNLQLHRRGH 104
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 30 FPCSVCQKVFRWKNSLKRHTEVH 52
F CSVC K F N+++ H H
Sbjct: 101 FSCSVCNKTFNRFNNMQMHMWGH 123
>At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 427
Score = 25.4 bits (53), Expect = 5.3
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Query: 24 HELKNNFPCSVCQKVFRWKNSLKRH-TEVH--LAKDTTEAAY----C--ESCGIGFKSVC 74
+ ++ CSVC +V+ L H +E H + Y C E CG+ FK+
Sbjct: 165 YNARHTASCSVCSRVYPTSRLLSIHISEAHDSFFQAKVSRGYDMYECLVEGCGLKFKTYK 224
Query: 75 SFQRHMKNSLKHVT 88
+ RH+ + K T
Sbjct: 225 ARHRHLIDKHKFPT 238
>At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max}; similar to polyphosphoinositide binding
protein Ssh2, Glycine max, gb:T05953; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus
Length = 668
Score = 25.4 bits (53), Expect = 5.3
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 1 MNRLRGNLPSASYQTRLLFRSAVHELKNNFPCSVCQKVF 39
+N L+ + + RL + A+H L++N+P V +++F
Sbjct: 455 VNDLKNSPGPGKTELRLATKQALHLLQDNYPEFVSKQIF 493
>At3g52490.1 68416.m05772 heat shock protein-related contains
similarity to 101 kDa heat shock protein; HSP101
[Triticum aestivum] gi|11561808|gb|AAC83689
Length = 815
Score = 25.4 bits (53), Expect = 5.3
Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 48 HTEVHLAKDTTEAAYCESCGIGFKSVCSFQRHMKNSLKHVT 88
+ + L + + + ++CE C + F+S F +K+S +VT
Sbjct: 389 NVSLQLQQSSDQLSFCEECSVKFESEARF---LKSSNSNVT 426
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 25.4 bits (53), Expect = 5.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C VC K F+ +L+ H H
Sbjct: 66 NRFICEVCNKGFKRDQNLQLHRRGH 90
>At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF04780:
Protein of unknown function (DUF629), PF04781: Protein
of unknown function (DUF627)
Length = 1106
Score = 25.4 bits (53), Expect = 5.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 32 CSVCQKVFRWKNSLKRHTEVHLAKDTTEAA 61
C C++ F KN LKR + + +D E A
Sbjct: 583 CDKCEECFSRKNFLKRKLFLSVVRDILEEA 612
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 25.0 bits (52), Expect = 7.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C +C K F+ +L+ H H
Sbjct: 59 NRFVCEICNKGFQRDQNLQLHRRGH 83
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 25.0 bits (52), Expect = 7.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C +C K F+ + +L+ H H
Sbjct: 4 NRFFCEICNKGFQREQNLQLHKRGH 28
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 25.0 bits (52), Expect = 7.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C +C K F+ +L+ H H
Sbjct: 80 NRFVCEICNKGFQRDQNLQLHRRGH 104
>At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 215
Score = 25.0 bits (52), Expect = 7.0
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 7/51 (13%)
Query: 9 PSASYQTRLLFRSAVHELKNN-------FPCSVCQKVFRWKNSLKRHTEVH 52
PS Q RL FR +E F C+ C+K F +L H H
Sbjct: 39 PSKENQQRLEFRFLFNESSTRNEAKARVFACTFCKKEFSTSQALGGHQNAH 89
>At4g12750.1 68417.m02002 expressed protein
Length = 1108
Score = 25.0 bits (52), Expect = 7.0
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Query: 5 RGNLPSASYQTRLLFRSAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCE 64
R LP +S + + +L + + QK K H E L KD T+ + E
Sbjct: 183 RATLPQSSARNPPHQKKKQRQLASILKQKLLQKRSTEKKRRSIHREAELNKDETQREFKE 242
Query: 65 SC-----GIGFKSVC 74
+C G FK C
Sbjct: 243 NCELAADGEVFKETC 257
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 25.0 bits (52), Expect = 7.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C +C K F+ +L+ H H
Sbjct: 80 NRFVCEICNKGFQRDQNLQLHRRGH 104
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 25.0 bits (52), Expect = 7.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C +C K F+ +L+ H H
Sbjct: 61 NRFVCEICNKGFQRDQNLQLHRRGH 85
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger
(C2H2 type) family protein identical to superman
protein GB:S60325 from [Arabidopsis thaliana]; contains
Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 25.0 bits (52), Expect = 7.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 29 NFPCSVCQKVFRWKNSLKRHTEVH 52
++ CS C++ FR +L H VH
Sbjct: 46 SYTCSFCKREFRSAQALGGHMNVH 69
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 25.0 bits (52), Expect = 7.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C +C K F+ +L+ H H
Sbjct: 97 NRFVCEICNKGFQRDQNLQLHRRGH 121
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 25.0 bits (52), Expect = 7.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C VC K F+ +L+ H H
Sbjct: 90 NRFICEVCNKGFQRDQNLQLHKRGH 114
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 25.0 bits (52), Expect = 7.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 30 FPCSVCQKVFRWKNSLKRHTEVHLAK 55
F C C+KVF+ +L H H K
Sbjct: 160 FECETCEKVFKSYQALGGHRASHKKK 185
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 24.6 bits (51), Expect = 9.3
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 63 CESCGIGFKSVCSFQRHMKNSLKHVTHDQR 92
CE CG GF+ F+ H S+ H++ +++
Sbjct: 66 CEECGKGFRYEKYFKNH--RSMMHLSPNEK 93
>At3g27490.1 68416.m03437 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 682
Score = 24.6 bits (51), Expect = 9.3
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 48 HTEVHLAKDTTEAAYCESCGIGFKSVCSFQRHMKNSLKHVTHD 90
H + L KD E +YC +C S +F + ++ + H+
Sbjct: 383 HNLMSLGKDGEEGSYCGACARPISSY-TFYKCSRSDCSFILHE 424
>At3g26230.1 68416.m03272 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 498
Score = 24.6 bits (51), Expect = 9.3
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 79 HMKNSLKHVTHDQ 91
H+KNS++ +THD+
Sbjct: 252 HLKNSIEEITHDR 264
>At2g44400.1 68415.m05522 DC1 domain-containing protein similar
to GP|2435515|AF024504
Length = 146
Score = 24.6 bits (51), Expect = 9.3
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 55 KDTTEAAY-CESCGIGFKSVCSFQRHMKNSLKHVTH 89
KD AY C CGI +VC+ +M + + H +H
Sbjct: 63 KDGDRLAYHCGDCGIDLHTVCA---NMPSRVTHQSH 95
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.130 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,284,125
Number of Sequences: 28952
Number of extensions: 79434
Number of successful extensions: 408
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 344
Number of HSP's gapped (non-prelim): 77
length of query: 93
length of database: 12,070,560
effective HSP length: 69
effective length of query: 24
effective length of database: 10,072,872
effective search space: 241748928
effective search space used: 241748928
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 51 (24.6 bits)
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