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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001781-TA|BGIBMGA001781-PA|IPR012934|Zinc finger,
AD-type
         (1137 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    33   0.015
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    28   0.32 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    28   0.32 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    28   0.32 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    28   0.32 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    24   5.1  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    24   6.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 32.7 bits (71), Expect = 0.015
 Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 17/179 (9%)

Query: 211 TSDICNPTDVQIVFMQNEDINENSTECFLSEVPHETSDICNPTNVQIVSVQDENINEN-- 268
           TS    PT V  +F+QN  + EN+ +  +   P+E    C      +V +++E+I E   
Sbjct: 154 TSKSLVPTPVTHIFLQNLILKENTYDAVIKWSPNEDYS-C---EYNLVWIKEESIYEERI 209

Query: 269 STECFLNEVTHETSDICNPMNPQI-VFVQNEDINGNSTECFLN-EVP-----HETSDICN 321
           S    L+E T   +D+    N  + +  ++E     S +  LN   P       T + C 
Sbjct: 210 SVVSGLHEAT--LTDLALGENYTVQIMAKSESSPFESLKKSLNFRTPSCLETFHTLEKCR 267

Query: 322 PTDVQIVFMQNEDINENSTECFLSEVPHEMSDICNPTNVEIVFVQNEDINENSTECFLN 380
           P   Q + + NE I + S + +   +     D+  P      F+  +  N N TE FLN
Sbjct: 268 PDPPQNLVI-NESIIDLSQQTYNVHLMWSKPDLI-PNYYIAHFINIDPENHNKTEIFLN 324


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 28.3 bits (60), Expect = 0.32
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 4/150 (2%)

Query: 658  VRVRKFTACLVNELPRAKSDISKPKNLQS-AFVQDEDKNEDSGRDIQISXXXXXXXXXXX 716
            V V+K    L  E  +A+    K K      F+Q    ++D    I+IS           
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123

Query: 717  XXEKNGFSGSKEDIETAFEDDDLNEYLQ-TEVSSPPRSKITNNKPTAISSNADCSGSPKA 775
              +      S  +I  + E   LN+ L   E +  P   I+  +  + SS  D       
Sbjct: 1124 HQKAGDEKASLINIADSLEM--LNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAV 1181

Query: 776  SVDLKDIAKNEVNQDLTSSVDHQQQDALVN 805
            + +  D + NE + +  S+V   ++D LVN
Sbjct: 1182 TEEGGDESANETDSETVSTVPQNKRDDLVN 1211



 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 1038 NSVPNKFSGRNGDIETAFEDDDLN---EYLQTEVSSPPSLKISNNK 1080
            +S+P K    NG +  AFE+D+ +     LQ +  +  + K SN++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 28.3 bits (60), Expect = 0.32
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 4/150 (2%)

Query: 658  VRVRKFTACLVNELPRAKSDISKPKNLQS-AFVQDEDKNEDSGRDIQISXXXXXXXXXXX 716
            V V+K    L  E  +A+    K K      F+Q    ++D    I+IS           
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123

Query: 717  XXEKNGFSGSKEDIETAFEDDDLNEYLQ-TEVSSPPRSKITNNKPTAISSNADCSGSPKA 775
              +      S  +I  + E   LN+ L   E +  P   I+  +  + SS  D       
Sbjct: 1124 HQKAGDEKASLINIADSLEM--LNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAV 1181

Query: 776  SVDLKDIAKNEVNQDLTSSVDHQQQDALVN 805
            + +  D + NE + +  S+V   ++D LVN
Sbjct: 1182 TEEGGDESANETDSETVSTVPQNKRDDLVN 1211



 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 1038 NSVPNKFSGRNGDIETAFEDDDLN---EYLQTEVSSPPSLKISNNK 1080
            +S+P K    NG +  AFE+D+ +     LQ +  +  + K SN++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 28.3 bits (60), Expect = 0.32
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 4/150 (2%)

Query: 658  VRVRKFTACLVNELPRAKSDISKPKNLQS-AFVQDEDKNEDSGRDIQISXXXXXXXXXXX 716
            V V+K    L  E  +A+    K K      F+Q    ++D    I+IS           
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123

Query: 717  XXEKNGFSGSKEDIETAFEDDDLNEYLQ-TEVSSPPRSKITNNKPTAISSNADCSGSPKA 775
              +      S  +I  + E   LN+ L   E +  P   I+  +  + SS  D       
Sbjct: 1124 HQKAGDEKASLINIADSLEM--LNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAV 1181

Query: 776  SVDLKDIAKNEVNQDLTSSVDHQQQDALVN 805
            + +  D + NE + +  S+V   ++D LVN
Sbjct: 1182 TEEGGDESANETDSETVSTVPQNKRDDLVN 1211



 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 1038 NSVPNKFSGRNGDIETAFEDDDLN---EYLQTEVSSPPSLKISNNK 1080
            +S+P K    NG +  AFE+D+ +     LQ +  +  + K SN++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 28.3 bits (60), Expect = 0.32
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 4/150 (2%)

Query: 658  VRVRKFTACLVNELPRAKSDISKPKNLQS-AFVQDEDKNEDSGRDIQISXXXXXXXXXXX 716
            V V+K    L  E  +A+    K K      F+Q    ++D    I+IS           
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123

Query: 717  XXEKNGFSGSKEDIETAFEDDDLNEYLQ-TEVSSPPRSKITNNKPTAISSNADCSGSPKA 775
              +      S  +I  + E   LN+ L   E +  P   I+  +  + SS  D       
Sbjct: 1124 HQKAGDEKASLINIADSLEM--LNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAV 1181

Query: 776  SVDLKDIAKNEVNQDLTSSVDHQQQDALVN 805
            + +  D + NE + +  S+V   ++D LVN
Sbjct: 1182 TEEGGDESANETDSETVSTVPQNKRDDLVN 1211



 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 1038 NSVPNKFSGRNGDIETAFEDDDLN---EYLQTEVSSPPSLKISNNK 1080
            +S+P K    NG +  AFE+D+ +     LQ +  +  + K SN++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 7/79 (8%)

Query: 386 MSDICNPTNV--EIVFAQAEDINENSGRVNQDLISSVDHQQQDAVVNAKSVFREK----F 439
           ++D+C   N   +++     DI++   R N+ + S++   Q +  + A   F       F
Sbjct: 310 VTDLCQEANSTKKLIVKIKIDIDKEDER-NEVISSALKLSQNELEITACKFFSIDNALLF 368

Query: 440 QRWSPKKLKTKSKISLDKE 458
              S KKL  K +I +DKE
Sbjct: 369 SANSTKKLIVKIRIDIDKE 387


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
          protein 4 protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 25 NVVPEDKILKYYVDSLRE 42
          NVV  +++LK YVD L E
Sbjct: 37 NVVKNERLLKSYVDCLLE 54


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.128    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,418
Number of Sequences: 317
Number of extensions: 10310
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 13
length of query: 1137
length of database: 114,650
effective HSP length: 64
effective length of query: 1073
effective length of database: 94,362
effective search space: 101250426
effective search space used: 101250426
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 48 (23.4 bits)

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