Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001778-TA|BGIBMGA001778-PA|IPR007087|Zinc finger,
C2H2-type
(218 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 41 7e-04
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 40 0.001
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 38 0.005
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 38 0.007
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 37 0.009
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 36 0.016
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 36 0.021
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 36 0.028
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 36 0.028
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 35 0.049
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 34 0.065
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 34 0.065
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 34 0.086
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 34 0.086
At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 33 0.11
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 33 0.11
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 33 0.11
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 33 0.15
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 33 0.15
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 33 0.20
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 33 0.20
At1g50650.1 68414.m05694 stigma-specific Stig1 family protein lo... 32 0.26
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 32 0.26
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 32 0.26
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 31 0.46
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 31 0.80
At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein ... 31 0.80
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 30 1.1
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 30 1.4
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 30 1.4
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 29 1.9
At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein ... 29 2.4
At4g10370.1 68417.m01702 DC1 domain-containing protein contains ... 29 2.4
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 29 2.4
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 29 3.2
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 29 3.2
At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein ... 29 3.2
At2g41220.1 68415.m05090 glutamate synthase, chloroplast (GLU2) ... 29 3.2
At2g32370.1 68415.m03956 homeobox-leucine zipper family protein ... 29 3.2
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 29 3.2
At2g10560.1 68415.m01113 hypothetical protein 29 3.2
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 28 4.3
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 28 4.3
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 28 4.3
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 28 4.3
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 28 5.7
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 28 5.7
At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identi... 28 5.7
At1g13200.1 68414.m01531 F-box family protein contains F-box dom... 28 5.7
At5g40820.1 68418.m04956 FAT domain-containing protein / phospha... 27 7.5
At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein ... 27 7.5
At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 27 7.5
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 27 7.5
At1g14170.1 68414.m01675 KH domain-containing protein location o... 27 7.5
At5g45730.1 68418.m05622 DC1 domain-containing protein contains ... 27 9.9
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 27 9.9
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 27 9.9
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 27 9.9
At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger) fa... 27 9.9
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 40.7 bits (91), Expect = 7e-04
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 146 HQNIKENLRDKMC--QKCGKAFRYKKSLREHELIHTGEKPLVCGE--CGRRFRQGAALYT 201
HQ + + R C + C F++ S EH +HTG +P VC E CG+ FR +
Sbjct: 1280 HQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSR 1339
Query: 202 HCRR 205
H R+
Sbjct: 1340 HKRK 1343
Score = 32.3 bits (70), Expect = 0.26
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 161 CGKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGAALYTHCRRVHQNTHDRARP 216
CGK F K L +H+ +H+ ++PL C G + + R H H ARP
Sbjct: 1267 CGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKM---TFKWAWSRTEHIRVHTGARP 1319
Score = 30.7 bits (66), Expect = 0.80
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Query: 1 MSFETKRLRVGHSRRAHAEGLACSV--CGKRYPSKYSLLQHERLHRG--PL--PREECGV 54
MSF +++ + H R C + CGK + S L+QH+R+H PL P + C +
Sbjct: 1246 MSFSSEKQLMLHKRNI------CPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKM 1299
Query: 55 CHKMIRVDLVKAHARIHEDRQSYECLK--CDKKYVSKASYENHLKFSRAHAV 104
K H R+H + Y C + C + + + + H K H+V
Sbjct: 1300 TFKWAWSR--TEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRH-KRKTGHSV 1348
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 144 RAHQNIKENLRDKMCQK--CGKAFRYKKSLREHELIHTGEKPLVC--GECGRRFRQGAAL 199
R H +I R +C + CGK F L+ H LIHTGE+ +C CG+ F L
Sbjct: 97 RKHSHIHGE-RQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNL 155
Query: 200 YTHCRRVHQNTH 211
+H + Q +
Sbjct: 156 RSHMKTHSQENY 167
Score = 35.9 bits (79), Expect = 0.021
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 161 CGKAFRYKKSLREHELIHTGEKPLVCGE--CGRRFRQGAALYTH 202
CGK F +LR+H IH GE+ VC + CG++F + L H
Sbjct: 86 CGKTFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRH 128
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 126 YIIPQPLATRRCITRHIRRAHQNIKENLRDKMC--QKCGKAFRYKKSLREHELIHTGEKP 183
Y+ Q ++ + + H I R+ +C + CGKAF +LR H H+ E
Sbjct: 108 YVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENY 167
Query: 184 LVC--GECGRRFRQGAALYTHCRRVHQ 208
+C C +R+ L H H+
Sbjct: 168 HICPYSGCVKRYAHEYKLKNHVAAYHE 194
Score = 30.7 bits (66), Expect = 0.80
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Query: 26 CGKRYPSKYSLLQHERLHRGPLPREECGV--CHKMIRVDL-VKAHARIHEDRQSYEC--L 80
CGK++ L +H +H G C C K +D +++H + H + C
Sbjct: 115 CGKKFLDSSKLKRHYLIHTGE-RNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYS 173
Query: 81 KCDKKYVSKASYENHL-KFSRAHAVVDVLKDNPPSD 115
C K+Y + +NH+ + + + K PP++
Sbjct: 174 GCVKRYAHEYKLKNHVAAYHEKNGGGETPKYTPPAE 209
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 146 HQNIKENLRDKMC--QKCGKAFRYKKSLREHELIHTGEKPLVC--GECGRRFRQGAALYT 201
HQ + ++ R C + C F+++ + EH +HTGE+P +C CG FR +
Sbjct: 1258 HQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSR 1317
Query: 202 HCRR 205
H R+
Sbjct: 1318 HRRK 1321
Score = 33.1 bits (72), Expect = 0.15
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 1 MSFETKRLRVGHSR-RAHAEGLACSVCGKRYPSKYSLLQHERLHRGPLPRE-ECGVCHKM 58
M+FE+K H R R EG CGK++ + L+ H+R+H+ P E C
Sbjct: 1224 MTFESKAKLQTHKRNRCTHEG-----CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMT 1278
Query: 59 IRVDLVKA-HARIHEDRQSYECL--KCDKKYVSKASYENH 95
+ + H R+H + Y C C + + Y H
Sbjct: 1279 FKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRH 1318
Score = 32.3 bits (70), Expect = 0.26
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 161 CGKAFRYKKSLREHELIHTGEKPLVCG--ECGRRFRQGAALYTHCR 204
CGK FR K L H+ +H E+P C C F+ A H R
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLR 1290
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 37.5 bits (83), Expect = 0.007
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCG-KAFRYKKSLREHELIHTGEKPLVCGE 188
QPL + C H +R+H + MC++C K F LR HE H G+ VC
Sbjct: 285 QPLKSVICAKNHYKRSHCP-----KMYMCRRCSVKHFSVLSDLRTHEK-HCGDIKWVC-S 337
Query: 189 CGRRFRQGAALYTHCRRV--HQNTHDRARP 216
CG +F + L +H H H ++P
Sbjct: 338 CGTKFSRKDKLMSHVSLFLGHVPAHGSSKP 367
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 37.1 bits (82), Expect = 0.009
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIRVDLVKAHARIHEDRQSYECLKC 82
C C K +PS +L H R+H G K + VD K A+ H+ +Q C +C
Sbjct: 11 CKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRL-VDQRKMMAQKHKQQQQVGCREC 69
Query: 83 DKKYVSKASYENHLKFSRAHAVVDVLKDNPPSD 115
+ +VS + H+ ++ DN SD
Sbjct: 70 GRVFVSLKALRGHMA-CHGEVKKMLMDDNSQSD 101
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 36.3 bits (80), Expect = 0.016
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H +R H ++ MC+KCGKAF + R HE + G K C C
Sbjct: 280 KPLKDFRTLQTHYKRKH-----GIKPFMCRKCGKAFAVRGDWRTHEK-NCG-KLWYC-IC 331
Query: 190 GRRFRQGAALYTHCR 204
G F+ +L H +
Sbjct: 332 GSDFKHKRSLKDHIK 346
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 35.9 bits (79), Expect = 0.021
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H +R H +R C++CGKAF K R HE + G K C C
Sbjct: 319 RPLKDFRTLQTHYKRKH-----GVRPFACRRCGKAFAVKGDWRTHEK-NCG-KLWYC-SC 370
Query: 190 GRRFRQGAALYTHCR 204
G F+ +L H +
Sbjct: 371 GSDFKHKRSLKDHVK 385
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 35.5 bits (78), Expect = 0.028
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKC-GKAFRYKKSLREHELIHTGEKPLVCGE 188
QPL T C+ H +R H + + C +C K F L+ HE H G+ +C
Sbjct: 312 QPLKTILCVKNHYKRTHCD-----KSFTCSRCHTKKFSVIADLKTHEK-HCGKNKWLC-S 364
Query: 189 CGRRFRQGAALYTH 202
CG F + L+ H
Sbjct: 365 CGTTFSRKDKLFGH 378
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 35.5 bits (78), Expect = 0.028
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKC-GKAFRYKKSLREHELIHTGEKPLVCGE 188
QPL T C+ H +R H + + C +C K F L+ HE H G+ +C
Sbjct: 312 QPLKTILCVKNHYKRTHCD-----KSFTCSRCHTKKFSVIADLKTHEK-HCGKNKWLC-S 364
Query: 189 CGRRFRQGAALYTH 202
CG F + L+ H
Sbjct: 365 CGTTFSRKDKLFGH 378
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 34.7 bits (76), Expect = 0.049
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 17 HAEGLACSVCGKRYPSKYSLLQHERLHRGPL 47
H + CSVCGK +PS +L H+ HR P+
Sbjct: 90 HQKDYKCSVCGKSFPSYQALGGHKTSHRKPV 120
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 10 VGHSRRAHAEGLACSVCGKRYPSKYSLLQHERLH 43
VG S + H CS+C K +PS +L H+R H
Sbjct: 142 VGQSGKTHN----CSICFKSFPSGQALGGHKRCH 171
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 34.3 bits (75), Expect = 0.065
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 158 CQKCGKAFRYKKSLREH-ELIHTGEKPLVCGE 188
C++CGK FRY+K + H ++H VC E
Sbjct: 66 CEECGKGFRYEKYFKNHRSMMHLSPNEKVCEE 97
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 34.3 bits (75), Expect = 0.065
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 138 ITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGA 197
I +H RR H N K+ +C++C K + + + H L G + C +CGR F +
Sbjct: 131 IKKHFRRKHSNHKQ----WVCERCSKGYAVQSDYKAH-LKTCGTRGHSC-DCGRVFSRVE 184
Query: 198 ALYTH-----CRRVHQ 208
+ H RRVH+
Sbjct: 185 SFIEHQDNCSARRVHR 200
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 55 CHKMIRVDLVKAH-ARIHEDRQSYECLKCDKKYVSKASYENHLK 97
CH + + +K H R H + + + C +C K Y ++ Y+ HLK
Sbjct: 122 CHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLK 165
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 33.9 bits (74), Expect = 0.086
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIRVDLVKAHARIHEDRQSYECLKC 82
C +CGK + +L H+R+HR P+ + + K R YEC C
Sbjct: 45 CKICGKSFECYQALGGHQRIHR-PIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVC 103
Query: 83 DKKYVSKASYENHLKFSRA 101
K + H K R+
Sbjct: 104 GKIFGCYRGLGGHTKLHRS 122
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPL-PREE 51
CS+C K + +L H+RLHR L P+ E
Sbjct: 447 CSICEKSFVCSQALGSHQRLHRWKLVPKPE 476
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 23 CSVCGKRYPSKYSLLQHERLHR 44
C +CGK + L H+R+HR
Sbjct: 200 CKICGKSFVCSQGLGNHKRVHR 221
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 186 CGECGRRFRQGAALYTHCRRVHQNTHDR 213
C CGR+F +Y H +R+H H+R
Sbjct: 326 CKTCGRKFGTLKGVYGH-QRMHSGNHNR 352
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 33.9 bits (74), Expect = 0.086
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 150 KENLRDKMCQKCGKAFRYKKSLREH-ELIHTGEKPL--------VCGECGRRFRQGAALY 200
K+N ++C +CG F SL EH E H K VC C R FR L
Sbjct: 207 KDNGIVEVCPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNVTVDVCPRCSRGFRDPVDLV 266
Query: 201 THCRRVHQNT 210
H R H+ T
Sbjct: 267 NHIERDHRGT 276
>At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 395
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 20 GLACSVCGKRYPSKYSLLQHERL--HRGPLPREECGV------CHKMIRVDLVKAHARIH 71
GLAC+ C K + H + HR L R+ GV + + + + +
Sbjct: 3 GLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQAAIAQEKVKAV 62
Query: 72 EDRQSYECLKCDKKYVSKASYENHLKFSRAHAV 104
E Y C C+K Y S ++E HLK S++H +
Sbjct: 63 EAPMLYSCGICNKGYRSSKAHEQHLK-SKSHVL 94
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 161 CGKAFRYKKSLREHELIHT--GEKPLVCGE--CGRRFRQGAALYTHCRRVHQN 209
CGKAF+Y L++H+ H C E C + F L +H R HQ+
Sbjct: 222 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQH 274
Score = 32.7 bits (71), Expect = 0.20
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 150 KENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVC--GECGRRFRQGAALYTH 202
+E+ + CQ+CG F+ L++H H+ E+ C +C +R+ L H
Sbjct: 60 EESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRH 114
Score = 31.9 bits (69), Expect = 0.35
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 13/78 (16%)
Query: 137 CITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIH-----TGEKPLVCGECGR 191
C+ HIR HQ+I C+ CG KK+++ H H GE C
Sbjct: 263 CLKSHIRSCHQHIN-------CEICGSK-HLKKNIKRHLRTHDEDSSPGEIKCEVEGCSS 314
Query: 192 RFRQGAALYTHCRRVHQN 209
F + + L H + VH +
Sbjct: 315 TFSKASNLQKHMKAVHDD 332
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 161 CGKAFRYKKSLREHELIHT--GEKPLVCGE--CGRRFRQGAALYTHCRRVHQN 209
CGKAF+Y L++H+ H C E C + F L +H R HQ+
Sbjct: 134 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQH 186
Score = 31.9 bits (69), Expect = 0.35
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 13/78 (16%)
Query: 137 CITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIH-----TGEKPLVCGECGR 191
C+ HIR HQ+I C+ CG KK+++ H H GE C
Sbjct: 175 CLKSHIRSCHQHIN-------CEICGSK-HLKKNIKRHLRTHDEDSSPGEIKCEVEGCSS 226
Query: 192 RFRQGAALYTHCRRVHQN 209
F + + L H + VH +
Sbjct: 227 TFSKASNLQKHMKAVHDD 244
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 33.1 bits (72), Expect = 0.15
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Query: 20 GLACSVCGKRYPSKYSLLQHERL--HRGPLPREECGVCHKMIRVDLVKAHARIHEDRQS- 76
GL C+ C + + H + HR L R+ GV + + A E +S
Sbjct: 3 GLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNKSN 62
Query: 77 -----YECLKCDKKYVSKASYENHLKFSRAHAVVDVLKDNPPSDGLGMRPDTDIYIIPQ 130
Y C C K Y S ++E HL+ SR+H VL+ S G + + DI II Q
Sbjct: 63 EAPMLYTCAICAKGYRSSKAHEQHLQ-SRSH----VLR---VSQGTSINGEEDIAIIRQ 113
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 33.1 bits (72), Expect = 0.15
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Query: 20 GLACSVCGKRYPSKYSLLQHERL--HRGPLPREECGVCHKMIRVDLVKAHARIHEDRQS- 76
GL C+ C + + H + HR L R+ GV + + A E +S
Sbjct: 3 GLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNKSN 62
Query: 77 -----YECLKCDKKYVSKASYENHLKFSRAHAVVDVLKDNPPSDGLGMRPDTDIYIIPQ 130
Y C C K Y S ++E HL+ SR+H VL+ S G + + DI II Q
Sbjct: 63 EAPMLYTCAICAKGYRSSKAHEQHLQ-SRSH----VLR---VSQGTSINGEEDIAIIRQ 113
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 32.7 bits (71), Expect = 0.20
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 138 ITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGA 197
I +H RR H N K+ +C++C K + + + H L G + C +CGR F +
Sbjct: 134 IKKHFRRKHSNHKQ----WICERCSKGYAVQSDYKAH-LKTCGTRGHSC-DCGRVFSRVE 187
Query: 198 ALYTH 202
+ H
Sbjct: 188 SFIEH 192
Score = 32.3 bits (70), Expect = 0.26
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 55 CHKMIRVDLVKAH-ARIHEDRQSYECLKCDKKYVSKASYENHLK 97
CH + + +K H R H + + + C +C K Y ++ Y+ HLK
Sbjct: 125 CHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLK 168
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 32.7 bits (71), Expect = 0.20
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H +R H + + C+ CGKAF K R HE + G K C C
Sbjct: 241 KPLKDFRTLQTHYKRKHGS-----KPFACRMCGKAFAVKGDWRTHEK-NCG-KLWYC-SC 292
Query: 190 GRRFRQGAALYTHCR 204
G F+ +L H +
Sbjct: 293 GSDFKHKRSLKDHVK 307
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 12 HSRRAH-AEGLACSVCGKRYPSKYSLLQHERLHRGPLPREECG--VCHKMIRVDLVKAHA 68
H +R H ++ AC +CGK + K HE+ + G L CG HK D VKA
Sbjct: 252 HYKRKHGSKPFACRMCGKAFAVKGDWRTHEK-NCGKLWYCSCGSDFKHKRSLKDHVKAFG 310
Query: 69 RIH 71
H
Sbjct: 311 NGH 313
>At1g50650.1 68414.m05694 stigma-specific Stig1 family protein low
similarity to stigma-specific protein STIG1 [Nicotiana
tabacum] GI:496647; contains Pfam profile PF04885:
Stigma-specific protein, Stig1
Length = 174
Score = 32.3 bits (70), Expect = 0.26
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 158 CQKCGKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGA 197
C+ C K+ R+ S + + + T P CG+CG GA
Sbjct: 89 CRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGA 128
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 32.3 bits (70), Expect = 0.26
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 55 CHKMIRVDLVKAH-ARIHEDRQSYECLKCDKKYVSKASYENHLKF--SRAHA 103
CH + + +K H R H + + C +C K Y ++ Y+ HLK SR H+
Sbjct: 95 CHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGSRGHS 146
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 32.3 bits (70), Expect = 0.26
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H +R H + + C KCGKA K R HE + G K C C
Sbjct: 244 KPLKDFRTLQTHYKRKHGS-----KPFSCGKCGKALAVKGDWRTHEK-NCG-KLWYC-TC 295
Query: 190 GRRFRQGAALYTHCR 204
G F+ +L H R
Sbjct: 296 GSDFKHKRSLKDHIR 310
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 31.5 bits (68), Expect = 0.46
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 181 EKPLVCGECGRRFRQGAALYTHCRRVH 207
EK +C ECG+RF G AL H +R+H
Sbjct: 76 EKKHICCECGKRFVSGKALGGH-KRIH 101
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIRVDLVKAH-ARIHEDRQSYECLK 81
C CGKR+ S +L H+R+H L + M+R +V R C
Sbjct: 81 CCECGKRFVSGKALGGHKRIH--VLETRK----FSMMRPKMVSGMVGRSERGDLEVACCV 134
Query: 82 CDKKYVSKASYENHLKF 98
C KK+ S + H++F
Sbjct: 135 CYKKFTSMKALYGHMRF 151
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 10 VGHSRRAHAEGLACSVCGKRYPSKYSLLQHERLH 43
VG S R E +AC VC K++ S +L H R H
Sbjct: 120 VGRSERGDLE-VACCVCYKKFTSMKALYGHMRFH 152
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 30.7 bits (66), Expect = 0.80
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIR-VDLVKAH 67
C C +++ K L++H R+ + CG+C+K R D ++ H
Sbjct: 8 CGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREH 53
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 3 FETKRLRVGHSRRAH--AEGLACSVCGKRYPSKYSLLQHERLHRGPLPREEC 52
F K V H R ++ C +C K S SL +H GPLP++EC
Sbjct: 15 FNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLI---GPLPKQEC 63
>At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 271
Score = 30.7 bits (66), Expect = 0.80
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 162 GKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGAALYTHCR 204
G+A + KK +E L H + P VC CGR F A++ H R
Sbjct: 118 GEAKKPKKKAKE--LTHPPKGPPVCHICGRGFGSWKAVFGHMR 158
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 182 KPLVCGECGRRFRQGAALYTHCRRVHQNTHDR 213
+P CG C RRF L H +++H+ + +
Sbjct: 115 EPYFCGVCDRRFYTNEKLINHFKQIHETENQK 146
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIR-VDLVKAHARIHEDRQSYEC 79
C C K + + L++H ++ L + CGVC K + + V+ H + + C
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNC 76
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIR-VDLVKAHARIHEDRQSYEC 79
C C K + + L++H ++ L + CGVC K + + V+ H + + C
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNC 76
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H +R H + + C+ CGK K R HE + G K VC C
Sbjct: 208 KPLKDFRTLQTHYKRKHGH-----KPFSCRLCGKLLAVKGDWRTHEK-NCG-KRWVC-VC 259
Query: 190 GRRFRQGAALYTHCR 204
G F+ +L H +
Sbjct: 260 GSDFKHKRSLKDHVK 274
>At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 396
Score = 29.1 bits (62), Expect = 2.4
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 183 PLVCGECGRRFRQGAALYTHCRRVHQNTHDR 213
P +CG CGR+ + L H +++H+ +
Sbjct: 151 PYICGVCGRKCKTNLDLKKHFKQLHERERQK 181
>At4g10370.1 68417.m01702 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 687
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 12/52 (23%)
Query: 46 PLPREECGVCHKMIRVDLVKAHARIHEDRQSYECLKCDKKYV-SKASYENHL 96
P + CGVCH+ ++ D +Y C KCD +V SK + + H+
Sbjct: 290 PCGKLSCGVCHQ-----------QVDNDYGAYSCKKCDAYFVHSKCALQRHV 330
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 29.1 bits (62), Expect = 2.4
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 9/147 (6%)
Query: 75 QSYECLKCDKKYVSKASYENHLKFSRAHAVVDVLKDNPPSDGLGMRPD----TDIYIIPQ 130
+ + C C K++ S H++ D D +D L M + + +
Sbjct: 7 RKFVCKFCSKRFPCGKSLGGHIRTHMNENSAD--SDEDEADKLKMIDENGGQSSYGLREN 64
Query: 131 PLATRRCITRHIRRA--HQNIKENLRD-KMCQKCGKAFRYKKSLREHELIHTGEKPLVCG 187
P +R + A Q ++ L++ + C++CGK F K+L H H+ + +V
Sbjct: 65 PKKNKRFVDHRQIMALKQQQQQQQLQELRRCRECGKGFVSSKALCGHMACHSEREKIVMD 124
Query: 188 ECGRRFRQGAALYTHCRRVHQNTHDRA 214
+ + +RV H +A
Sbjct: 125 SQSDTEASSSPIRRRSKRVVVKPHHKA 151
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 158 CQKCGKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGAALYTH 202
C+KC K + + + H I G K C +CG F + + TH
Sbjct: 139 CEKCSKKYAVQSDWKAHSKI-CGTKEYKC-DCGTLFSRRDSFITH 181
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 64 VKAHARIHEDRQSYECLKCDKKYVSKASYENHLK 97
+K H + ++C KC KKY ++ ++ H K
Sbjct: 124 IKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSK 157
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 65 KAHARIHEDRQSYECLKCDKKYVSKASYENHLK 97
K ++R H +++ ++C KC KKY ++ ++ H K
Sbjct: 148 KHYSRKHGEKK-WKCEKCSKKYAVQSDWKAHAK 179
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 144 RAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGAALYTHC 203
+ H + K + C+KC K + + + H G + C +CG F + + TH
Sbjct: 147 KKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKT-CGTREYKC-DCGTLFSRKDSFITHR 204
Query: 204 RRVHQNTHDRAR 215
T + AR
Sbjct: 205 AFCDALTEEGAR 216
>At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 353
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 131 PLATRRCITRH--IRRAHQNIKENLRDKMCQKCGKAFRYKKSLREH-ELIHTGE 181
P T++ + H R +N K +R C++CGK F Y+K L H ++ H+ E
Sbjct: 54 PKKTQKSLLDHRFCTRRRRNKKILIR---CKECGKGFLYEKCLFNHLQVTHSEE 104
>At2g41220.1 68415.m05090 glutamate synthase, chloroplast (GLU2) /
ferredoxin-dependent glutamate synthase (Fd-GOGAT 2)
identical to SP|Q9T0P4 Ferredoxin-dependent glutamate
synthase 2, chloroplast precursor (EC 1.4.7.1) (Fd-GOGAT
2) {Arabidopsis thaliana}
Length = 1629
Score = 28.7 bits (61), Expect = 3.2
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 57 KMIRVDLVKAHARIHEDRQSYECLKCDKKYVSKASYENHLKFSRAHAVVDVLKDNPPSDG 116
+ + V +VK +R+ Y C K ++ V+ S+ + L FS V K S+
Sbjct: 236 EQVFVRIVKDDKVDDVERELYICRKLIERAVASESWASELYFSSLSNQTIVYKGMLRSEV 295
Query: 117 LGM-RPD--TDIYIIPQPLATRRCITRHIRRAH 146
LG+ PD D+Y P + RR T R H
Sbjct: 296 LGLFYPDLQNDLYKSPFAIYHRRFSTNTSPRWH 328
>At2g32370.1 68415.m03956 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
HD-Zip homeo domain OCL5 protein (GI:8920427) [Zea
mays]; contains Pfam PF00046: Homeobox domain and Pfam
PF01852: START domain
Length = 721
Score = 28.7 bits (61), Expect = 3.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 136 RCITRHIRRAHQNIKENLRDKMCQKCG 162
R + H+R +Q ++E + +C KCG
Sbjct: 136 RNLNNHLRSENQRLREAIHQALCPKCG 162
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 150 KENLRDKMCQKCGKAFRYKKSLREHELIHTG-EKPLVCGECGRRFRQGAALYTHCRRVHQ 208
K L+ K +K G + K+ +E +L T E + C CG+ F+ +L+ H RR
Sbjct: 86 KMKLKKKKKRKIGLVKKEKE--KEIDLARTDVEGKIRCCLCGKEFQTMHSLFGHMRRHPD 143
Query: 209 NTHDRARP 216
T RP
Sbjct: 144 RTWKGIRP 151
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 15 RAHAEG-LACSVCGKRYPSKYSLLQHERLH 43
R EG + C +CGK + + +SL H R H
Sbjct: 112 RTDVEGKIRCCLCGKEFQTMHSLFGHMRRH 141
>At2g10560.1 68415.m01113 hypothetical protein
Length = 278
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 142 IRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVC 186
I+R IK+N D QK G +Y++ R E GE+ +VC
Sbjct: 134 IKRLPSVIKDNKADMGSQKQGGKNKYEQPERSKESEEQGEEVVVC 178
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 125 IYIIPQPLATRRCITRHIR-----RAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHT 179
+Y+ P+P +R + + H K + C+KC K + + + H
Sbjct: 123 VYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKT-C 181
Query: 180 GEKPLVCGECGRRFRQGAALYTH 202
G K C +CG F + + TH
Sbjct: 182 GTKEYRC-DCGTIFSRRDSYITH 203
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 28.3 bits (60), Expect = 4.3
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 21/96 (21%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGP----------LPREECGVC-------HKMIRV--DL 63
C VC K + +L H+R H P + R++ VC H R DL
Sbjct: 94 CEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRALGDL 153
Query: 64 --VKAHARIHEDRQSYECLKCDKKYVSKASYENHLK 97
+K H + ++C KC KKY ++ ++ H K
Sbjct: 154 TGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAK 189
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 18 AEGLACSVCGKRYPSKYSLLQHERLHRGPLPRE 50
++ C+VCG+ PS +L H+ HR P E
Sbjct: 747 SDSYQCNVCGRELPSYQALGGHKASHRTKPPVE 779
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/73 (26%), Positives = 28/73 (38%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIRVDLVKAHARIHEDRQSYECLKC 82
CSVC K + S +L H+ HR L + G A +S+ C C
Sbjct: 82 CSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHVCTIC 141
Query: 83 DKKYVSKASYENH 95
+K + S + H
Sbjct: 142 NKSFPSGQALGGH 154
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 23 CSVCGKRYPSKYSLLQHERLH 43
C++C K +PS +L H+R H
Sbjct: 138 CTICNKSFPSGQALGGHKRCH 158
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGP 46
C+VCGK + S +L H+ HR P
Sbjct: 99 CTVCGKSFSSYQALGGHKTSHRKP 122
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 162 GKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGAALYTHCRR 205
G+ + + +L H + P +C CG+ F A++ H R+
Sbjct: 120 GEVVKKPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQ 163
>At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identical
to PRLI-interacting factor K [Arabidopsis thaliana]
GI:11139266; contains Pfam profiles PF03152: Ubiquitin
fusion degradation protein UFD1, PF00096: Zinc finger,
C2H2 type
Length = 561
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 158 CQKCGKAFRYKKSLREHELIHTGEKPLVCGECG 190
C+KCGKA + + + ++ H +PL CG CG
Sbjct: 449 CEKCGKALQPTEMEKHLKVFH---EPLTCG-CG 477
>At1g13200.1 68414.m01531 F-box family protein contains F-box domain
Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein
interaction domain
Length = 435
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 88 SKASYENHLKFSRA----HAVVDVLKDNPPSDGLGMRPDTDI 125
S++ E HL ++ H V ++ + P G G+RPDTDI
Sbjct: 76 SRSFEERHLTIAKKAFVDHPKVMLVGEEDPIRGTGIRPDTDI 117
>At5g40820.1 68418.m04956 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
similar to Atr protein [Xenopus laevis] GI:11385422;
contains Pfam profiles PF00454 Phosphatidylinositol 3-
and 4-kinase, PF02259 FAT domain, PF02260 FAT C domain
Length = 2702
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 55 CHKMIRVDLVKAHARIHEDRQSYECLKCDKKYVSKASYENHLKFSRAHAVVDVLKDN 111
CH ++ DL K ++ Q + C KCD K++ + E H + +V + D+
Sbjct: 688 CHLLLHEDLKKDET-LNSLLQGFRCSKCD-KFIERED-EKHFRIIETPEMVKLKMDH 741
>At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 230
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 23 CSVCGKRYPSKYSLLQHERLHR 44
C +CGK + +L H RLHR
Sbjct: 93 CQICGKSFECYQALGGHRRLHR 114
>At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 170
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREE 51
C +CG +P +L H R HR RE+
Sbjct: 88 CPICGLEFPMGQALGGHMRKHRNEKEREK 116
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 8 LRVGHSRRAHAEGLACSVCGKRYPSKYSLLQHERLHR 44
L H + AC C K +PS +L H HR
Sbjct: 21 LSKAHQNDTKSRVFACKTCNKEFPSFQALGGHRASHR 57
>At1g14170.1 68414.m01675 KH domain-containing protein location of
EST 219C14T7 , gb|N38506
Length = 454
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 102 HAVVDVLKDNPPSDGLGMRPDTDIYIIPQPLATRRCITRHIRRAHQN 148
+A + V+KD+ P+ L + D + II +PL R + + H N
Sbjct: 151 NAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDN 197
>At5g45730.1 68418.m05622 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 519
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 146 HQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGECG 190
H NI ++R C + F+++ L H L T ++ CG CG
Sbjct: 364 HMNILFDIR---CSSISEPFQHE--LHPHPLFRTSKEHKTCGACG 403
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 64 VKAHARIHEDRQSYECLKCDKKYVSKASYENHLK 97
+K H + ++C KC KKY ++ ++ H K
Sbjct: 126 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSK 159
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 64 VKAHARIHEDRQSYECLKCDKKYVSKASYENHLK 97
+K H + ++C KC KKY + ++ H K
Sbjct: 132 IKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSK 165
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREEC 52
C VC K S SL +H GPLP++EC
Sbjct: 46 CGVCKKHCRSFESLREHLI---GPLPKQEC 72
>At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 878
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 6 KRLRVGHSRR-AHAEGLACSVCGKRYPSK 33
K++ +G SRR + G+ C +C Y SK
Sbjct: 814 KKMELGESRRLSGTNGIVCPICLSEYASK 842
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.324 0.137 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,515,835
Number of Sequences: 28952
Number of extensions: 233982
Number of successful extensions: 1021
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 848
Number of HSP's gapped (non-prelim): 182
length of query: 218
length of database: 12,070,560
effective HSP length: 78
effective length of query: 140
effective length of database: 9,812,304
effective search space: 1373722560
effective search space used: 1373722560
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 57 (27.1 bits)
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