Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001771-TA|BGIBMGA001771-PA|undefined
(282 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 35 0.053
At5g02370.1 68418.m00160 kinesin motor protein-related kinesin, ... 29 2.7
At1g03830.1 68414.m00364 guanylate-binding family protein contai... 29 3.5
At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to... 29 4.6
At2g42300.1 68415.m05236 basic helix-loop-helix (bHLH) family pr... 29 4.6
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 29 4.6
At5g02850.1 68418.m00228 hydroxyproline-rich glycoprotein family... 28 8.1
At3g57800.2 68416.m06443 basic helix-loop-helix (bHLH) family pr... 28 8.1
At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containi... 28 8.1
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 28 8.1
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 35.1 bits (77), Expect = 0.053
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 59 QAKMQLVTEKIGELTTVMNTTAKELRVAEKKMSEYSLKLEQCERQLAEVR 108
+A + + TE ELT +N E + E + EYS+K+ + E L +R
Sbjct: 131 EAALNIATENEKELTENLNAVTSEKKKLEATVDEYSVKISESENLLESIR 180
>At5g02370.1 68418.m00160 kinesin motor protein-related kinesin,
Xenopus laevis, EMBL:XLA249840
Length = 628
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 45 VRRKGKKQKINP-AHQAKMQLVTEKIGELTTVMNTTAKELRVAEKKMSEYSLKLEQ 99
++ +G QK N ++ K L+ E I L T +EL+ +KM+EY ++L +
Sbjct: 531 MQMEGTCQKFNAWSNNLKTSLIKEYIHFLNTANREELRELKGIGQKMAEYIIELRE 586
>At1g03830.1 68414.m00364 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 991
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 11 YSYTCGERDGLSVSLATAAEHVRDARRALQHYHSVRRKGKKQKINPAHQAKMQLVTEKIG 70
Y T E+ ++ +A E ++ A S G + + + K +++TEK
Sbjct: 526 YENTVSEQKAVTEKIAAMEEKLKQA--------STTEDGLRAEFSRVLDEKEKIITEKAA 577
Query: 71 ELTTVMNTTAKELRVAEKKMSEYSLKLEQCERQLAEVR 108
+L T+ ++L ++ + +LK+++C + +VR
Sbjct: 578 KLATL----EQQLASTRAELKKSALKVDECSSEAKDVR 611
>At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 402
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 4 QARLHFAYSYTCGERDGLSVSLATAAEHVRDARRALQHYHSVRRKGKKQKINPAHQ 59
Q LH + +Y CGE+ GL E +R+ LQ ++ R+ KQ++ ++
Sbjct: 155 QLLLHVSTAYVCGEKPGLIPEKPFIMEEIRN-ENGLQLDINLERELMKQRLKELNE 209
>At2g42300.1 68415.m05236 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 327
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 31 HVRDARRALQHYHSVRRKGKKQKINPAHQAKMQLV--TEKIGELTTVMNTTAKELRVAEK 88
HVR R HS+ + +++KIN + +LV +KI V++ ++ ++
Sbjct: 184 HVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQR 243
Query: 89 KMSEYSLKL 97
++ S++L
Sbjct: 244 QVEMLSMRL 252
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 58 HQAKMQLVTEKIGELTTVMNTTAKELRVAEKKMSEYSLKLEQCERQLAEVRALAPPQ 114
++ K+ + E++ + E R E+K+SE + E ++QL + + PPQ
Sbjct: 650 YETKISSLREELELARESLKEMKDEKRKTEEKLSETKAEKETLKKQLVSLDLVVPPQ 706
>At5g02850.1 68418.m00228 hydroxyproline-rich glycoprotein family
protein
Length = 426
Score = 27.9 bits (59), Expect = 8.1
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Query: 24 SLATAAEHVRDARRALQHY---HSVRRKGKKQKINPAHQAKMQLVTEKIGELTTVMNTTA 80
SL A ++DA R L +S RK K+ KI + E TTV +
Sbjct: 185 SLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKIEEDDEDNDN---ESSSSSTTVSSQLK 241
Query: 81 -KELRVAEKKMSEYSLKLEQCERQLAEVRALAPPQPQDEE 119
K++ K+S + + A +R PP PQDE+
Sbjct: 242 LKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQ 281
>At3g57800.2 68416.m06443 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain; supported by full-length cDNA
gi:20127059
Length = 379
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 31 HVRDARRALQHYHSVRRKGKKQKINPAHQAKMQLV--TEKIGELTTVMNTTAKELRVAEK 88
HVR R HS+ + +++KIN + +LV +KI V++ ++ ++
Sbjct: 203 HVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQR 262
Query: 89 KMSEYSLKL 97
++ S++L
Sbjct: 263 QVEMLSMRL 271
>At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 530
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 57 AHQAKMQLVTEKIGELTTVMNTTAKELRVAEKKMSEYSLKLEQCERQLAEVRALAPPQPQ 116
A + K+ L + I + T ++ + ++ Y+ KLE+ + + + L P+
Sbjct: 436 ASRFKLDLFEKAIEDCTLALSLQPSYRKARRRRADSYA-KLEKWQHAIQDYELLMMETPE 494
Query: 117 DEET 120
DEET
Sbjct: 495 DEET 498
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 62 MQLVTEKIGELTTVMNTTAKELRVAEKKMSEYSLKLEQCERQLAEVRALAPPQPQDE 118
MQL E++ + + N A E ++ +S K+++ ER+ E+ ++ + +DE
Sbjct: 982 MQLEIEELSKGLEMTNDLAAENEQLKESVSSLQNKIDESERKYEEISKISEERIKDE 1038
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.311 0.123 0.335
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,799,478
Number of Sequences: 28952
Number of extensions: 139818
Number of successful extensions: 443
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 438
Number of HSP's gapped (non-prelim): 12
length of query: 282
length of database: 12,070,560
effective HSP length: 80
effective length of query: 202
effective length of database: 9,754,400
effective search space: 1970388800
effective search space used: 1970388800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
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