Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001770-TA|BGIBMGA001770-PA|undefined
         (1503 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   6.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   6.8  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
            transcriptase andRNase H protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 6.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 1405 GKVNPNAMEQIRLQQLKQHAQHPPAQQSKPEPI 1437
            G +  N    I     KQH + P A Q+K +P+
Sbjct: 231  GHIEVNHSAPITTCNKKQHLESPSALQAKVDPL 263


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 6.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 1292 GLSSESDNPERKQVTGQPQPV 1312
            GL    DNP R+  T  P+PV
Sbjct: 990  GLGLIPDNPSREDCTKPPEPV 1010


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.129    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,047
Number of Sequences: 317
Number of extensions: 10684
Number of successful extensions: 31
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29
Number of HSP's gapped (non-prelim): 2
length of query: 1503
length of database: 114,650
effective HSP length: 66
effective length of query: 1437
effective length of database: 93,728
effective search space: 134687136
effective search space used: 134687136
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 49 (23.8 bits)