Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001765-TA|BGIBMGA001765-PA|IPR004827|Basic-leucine
zipper (bZIP) transcription factor, IPR006035|Ureohydrolase,
IPR008917|Eukaryotic transcription factor, DNA-binding
(389 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56664| Best HMM Match : bZIP_1 (HMM E-Value=0.00033) 71 2e-12
SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09) 41 0.002
SB_16005| Best HMM Match : bZIP_Maf (HMM E-Value=5.6e-32) 40 0.003
SB_59208| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.024
SB_1224| Best HMM Match : bZIP_1 (HMM E-Value=8e-10) 37 0.024
SB_1576| Best HMM Match : bZIP_1 (HMM E-Value=1.1e-11) 37 0.032
SB_41032| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.23
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 33 0.30
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.92
SB_37808| Best HMM Match : Avirulence (HMM E-Value=2.8) 31 1.2
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 31 1.6
SB_17734| Best HMM Match : zf-C2H2 (HMM E-Value=0.0003) 31 1.6
SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7) 31 2.1
SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027) 31 2.1
SB_17789| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_37083| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_13922| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 30 2.8
SB_43304| Best HMM Match : bZIP_Maf (HMM E-Value=1e-05) 30 2.8
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 30 3.7
SB_12856| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_12314| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_4655| Best HMM Match : Spectrin (HMM E-Value=0) 30 3.7
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_50833| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.1e-08) 29 4.9
SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 4.9
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_28288| Best HMM Match : E-MAP-115 (HMM E-Value=0.076) 29 4.9
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 29 4.9
SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075) 29 6.5
SB_41031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25) 29 6.5
SB_29515| Best HMM Match : TolA (HMM E-Value=0.031) 29 6.5
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07) 29 6.5
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 29 8.5
SB_39672| Best HMM Match : Peptidase_M20 (HMM E-Value=9.9e-09) 29 8.5
SB_771| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.27) 29 8.5
>SB_56664| Best HMM Match : bZIP_1 (HMM E-Value=0.00033)
Length = 652
Score = 70.5 bits (165), Expect = 2e-12
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 206 GSASDGGSSCTSAQHLSRDEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEAQLSLI 265
G+++ G +++ + + A +L I + + I+ + + EF L K LS+AQ +
Sbjct: 362 GTSTSKGKKAVASKKVLASKADADSLDIGVSEEKIVEMSVAEFTTFLEK--LSDAQAKYV 419
Query: 266 RDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRK 303
RD+RRRGKNK AA+ CRKRK+D I +L DE+ ++ ++
Sbjct: 420 RDVRRRGKNKEAARICRKRKMDAIETLDDEITRLKQQR 457
>SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 41.5 bits (93), Expect = 0.001
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 256 DLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLA 315
DL EA +++ R++ +N++AA CRKRKL++ L D+V+ ++D+ + + L
Sbjct: 128 DLQEA----VKNERKKLRNRLAASKCRKRKLEKEAELEDKVKVLKDKNTKLVSEAQELRR 183
Query: 316 ERQRLKER 323
LKE+
Sbjct: 184 LVCELKEQ 191
>SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09)
Length = 275
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 250 ERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRD 309
+R +LS A+L R IRR +NK+AA CR+R+ + I L E + D +R+
Sbjct: 161 KRPKVEELSPAELEK-RRIRRE-RNKLAAFKCRQRRKEHIQELEIESEGIEDSNKELERE 218
Query: 310 HHSLLAERQRLKE 322
L +RQ+L+E
Sbjct: 219 ISELHEQRQQLEE 231
>SB_16005| Best HMM Match : bZIP_Maf (HMM E-Value=5.6e-32)
Length = 160
Score = 40.3 bits (90), Expect = 0.003
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 223 RDEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCR 282
R++ G+ + +++ L + E N L LS + S I+ RR KN+ A NCR
Sbjct: 45 REKFLCSLAGLGVTEEELAELGVKELNRLLKSKGLSTEEQSRIKYRRRTLKNRGYAHNCR 104
Query: 283 KRKLDQITSLAD-EVRTVRDRKLRTQRDHHSLLAERQRLKERFAALYRHVFQ 333
+++ Q SL + V+D + +++ + ER K ++ LY V +
Sbjct: 105 IKRISQKKSLEETNWELVQDLE-NLRKELEASKRERDMYKRKYENLYAMVMK 155
>SB_59208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 584
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/60 (26%), Positives = 37/60 (61%)
Query: 264 LIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLKER 323
+++ R++ +N++A+ CRKRKL++ L + V+ +++R + ++L + LK+R
Sbjct: 473 VVKRERKKQRNRIASSKCRKRKLEREARLENRVKDLKERNIELNAVANALKQQVCDLKQR 532
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 37.1 bits (82), Expect = 0.024
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 240 IINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTV 299
+ +P+ + N L L E + ++ RR KN+ AQN R +++ Q L E + +
Sbjct: 20 LATIPVKDLNNLL--RGLPEDDVFKLKQRRRTLKNRGYAQNSRTKRVRQREDLEYERQQL 77
Query: 300 RDRKLRTQRDHHSLLAERQRLKERFAALYR 329
+D +++ L ER K ++ +L +
Sbjct: 78 KDELFMVSKENEDLRRERDEAKRKYDSLQK 107
>SB_1224| Best HMM Match : bZIP_1 (HMM E-Value=8e-10)
Length = 496
Score = 37.1 bits (82), Expect = 0.024
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 265 IRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLK 321
++ IRRR +NK AA CR+++ ++ L E + ++ +RD +L E L+
Sbjct: 288 LKIIRRRQRNKQAASRCREKRRQRLEELQREATELEEQNAEVERDIATLRVEYNELE 344
>SB_1576| Best HMM Match : bZIP_1 (HMM E-Value=1.1e-11)
Length = 382
Score = 36.7 bits (81), Expect = 0.032
Identities = 16/60 (26%), Positives = 35/60 (58%)
Query: 264 LIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLKER 323
+++ R++ KN+VAA CR++KL++ L V+ ++++ + +L + LK+R
Sbjct: 304 IVKRERKKQKNRVAASKCRRKKLEREAQLEVRVQQLKEKSIELNAVASALRQQVGELKQR 363
>SB_41032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 34.3 bits (75), Expect = 0.17
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 241 INLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVR 300
++ P E+N +L+ + + R +RR+ +NKVAA CR ++ + + +L +
Sbjct: 63 LDCPKIEYNSSPQYEELTPEEETR-RKVRRQ-RNKVAASKCRLKRREHVKNLLKASEELE 120
Query: 301 DRKLRTQRDHHSLLAERQRLKERFAA 326
+ + D L AE+++L+ A
Sbjct: 121 SANSKLESDIACLNAEKEQLERMLDA 146
>SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1270
Score = 33.9 bits (74), Expect = 0.23
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 251 RLSKHDLSEAQLSLIRDIRRRGKNKVAAQN--CRKRKLDQITSLADEVRTVRDRKLRTQR 308
R+ HD EA + + D +N++ ++ RKR D+ +L + +R + R
Sbjct: 908 RIRLHDRHEASRNRLHDRHEASRNRLRDRHEASRKRLRDRHKALCNRLRDRHEASRNRLR 967
Query: 309 DHHSLLAERQRLKERFAA 326
D H A R RL++R A
Sbjct: 968 DRHE--ASRNRLRDRHEA 983
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 33.5 bits (73), Expect = 0.30
Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 273 KNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLKERFAALYRHVF 332
K++ A+ +R+ D++ L + R+++ + +++ S + L+E +H+
Sbjct: 4301 KSEANAEEALQRRTDELEKLQSQTRSLQSQLELIEKEKESWESRESELQEEL----QHLQ 4356
Query: 333 QNLRDPEGRPLSSGQYSLQQAADGNVVLVPKMPQHQDHPMNRT-SDDEMERKAKHY 387
+NL D E +S + QQAA L + + +H N+ +D++ R+ Y
Sbjct: 4357 KNLVDLEDEEVSHHVEATQQAAIEIEKLCEEKQKLAEHLQNQARENDKLVREEGQY 4412
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 31.9 bits (69), Expect = 0.92
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 235 LEVQDIINLPMDEFNERLSKHDLSEAQLS-------LIRDIRRRGKNKVAAQNCRKRKLD 287
LEV D+++L ++E E L DLS+AQL L + R +NC K K
Sbjct: 658 LEV-DVLSLKVEEL-ETLRAKDLSDAQLQQEARLVELGELLNTRDIELKNYENCVKEKSS 715
Query: 288 QITSLADEVRTVRDRKLRTQR-DHHSLLAERQRLKERFAAL 327
+I L +E+ +R+R + + LL + +E F AL
Sbjct: 716 EIGHLQEEISGLRERIRHLEEVEIKELLENAHQQREAFNAL 756
>SB_37808| Best HMM Match : Avirulence (HMM E-Value=2.8)
Length = 645
Score = 31.5 bits (68), Expect = 1.2
Identities = 28/79 (35%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 142 HVAGLQPALELNAPHSSHALLQGAVGP-GFGVPERVRHNHTYSAPLAAPPHAPTVRDKRV 200
H G L L +P SSH QG V P P R H H APLA P R V
Sbjct: 20 HRQGTVSQLPLPSPKSSHR--QGNVAPLALSSPHR-GHRHGNVAPLALPSPKSGHRQGNV 76
Query: 201 RRLTDGSASDGGSSCTSAQ 219
+L S + G AQ
Sbjct: 77 AQLALASPNSGHRQGNVAQ 95
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 246 DEFNE-RLSKHDLSEAQLSLIRDIRRRGKNKVAA-QNCRKRKLDQITSLADEVRTVRDRK 303
D+ NE R S +D SL+ + R + K + CR+R +++TSL +++ + +R
Sbjct: 200 DQLNEARASTNDRINTLNSLVSTLNERLERKESTLMECRRRHDEELTSLQKKIKNLEERL 259
Query: 304 LRTQR 308
T +
Sbjct: 260 SSTNQ 264
>SB_17734| Best HMM Match : zf-C2H2 (HMM E-Value=0.0003)
Length = 369
Score = 31.1 bits (67), Expect = 1.6
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 291 SLADEVRTVRDRKLRTQRDHHSLLAERQRLKERFAALYRHVFQNLRDPEGRPLSS--GQY 348
+L +EV+ ++DR T+RD L+ ER + ++A R+ F N D + + L S Q+
Sbjct: 165 ALIEEVKQIKDRLYATERD---LMNERNAREMQYAK-DRNQFSN-DDQKVKELESKYEQW 219
Query: 349 SLQQAADGNVVLVPKMPQHQDHPMNRTSDDEMERKAKHYDQ 389
+Q+ + L+ Q N ++ ++ E+KA D+
Sbjct: 220 KMQEDENHRRELMSLRQSLQREIQNMSTQNQQEKKALTQDE 260
>SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7)
Length = 434
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 274 NKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLKERFAALYRHVFQ 333
+++ N +KR++ Q+ + + DR+++ Q++ + LA RQ +ER R + +
Sbjct: 319 DRIEQMNAQKRRMRQLEHKRAVEKLIEDRRMQFQQEREAELAARQE-EERMEMYRRQIVE 377
Query: 334 NLR 336
R
Sbjct: 378 QER 380
>SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/74 (22%), Positives = 36/74 (48%)
Query: 266 RDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLKERFA 325
+D+ G ++ Q R+L++ +E RT R+++ +R+ L +R+ + R A
Sbjct: 461 KDVDDSGSLELRRQREEARRLEEQRRREEEERTRREKEEAQRREEEEALMKREEEERRDA 520
Query: 326 ALYRHVFQNLRDPE 339
R + +R+ E
Sbjct: 521 ERKREAERKIREEE 534
Score = 28.7 bits (61), Expect = 8.5
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 209 SDGGSSCTSAQHLSRDEKRAKALGIPLEVQDIINLPMDEFNERLSK-HDLSEAQLSLIRD 267
S G+S + ++++K A PL+V ++ + +R++K H+ E + D
Sbjct: 131 SSYGASRAQTKQKTKNKKSLSADSQPLQVSTVVQRALSANRKRVTKLHNTVEELQQEVDD 190
Query: 268 IRRRGK--NKVAAQNCRK-RKLDQ--------ITSLADEVRTVRDRKLRTQRD 309
+R+ + KV + R R +DQ + + E+RT+R+R R ++D
Sbjct: 191 LRKENRMLKKVNMRQERDLRHVDQEEAALPMLLQRHSAEMRTLRERLKRNKQD 243
>SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027)
Length = 2261
Score = 30.7 bits (66), Expect = 2.1
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 219 QHLSRDEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEAQLSLIRD-IRRRGKNKVA 277
Q ++D+K K P + P E E Q LIR+ R+ VA
Sbjct: 1713 QKKAKDKKEKKGRKSPGKSSMKAETPPPPPPEDAEGESEEEKQKILIREKARKEFLGAVA 1772
Query: 278 AQNCR-KRKLDQITSLADEV-RTVRDRKLRTQRDHHSLLAERQRLK-ERFAALYRHVFQN 334
A++ K +L+ I + + V + ++ + +D L ER + ER A+ + HVF+
Sbjct: 1773 AEDLGLKTRLEMIKAHSMAVLQDIKSKAEVMHKDMDQWLGERFLQEVERMASTFHHVFRI 1832
Query: 335 LRDPEGRPLSSGQYSLQQAA 354
L DP GR L +S+++ A
Sbjct: 1833 LGDP-GR-LGDRGHSIKEMA 1850
>SB_17789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 257 LSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSL 292
L++ Q ++ IRR+ KNK++AQ R++K + + +L
Sbjct: 155 LTKTQERALKRIRRKIKNKLSAQESRRKKKEYVETL 190
>SB_37083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 30.3 bits (65), Expect = 2.8
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 305 RTQRDHHSLLAERQRLKER-FAALYRHVFQNLRDPEGRPLSSGQYSLQQAADGNVVLVPK 363
R ++ HH LL R KER A + V QN + G + QY+ +VL+
Sbjct: 69 RAEKRHHKLLHNESRRKEREGAGTEQPVVQNQQKENGTQRGTEQYATTTCIKQRMVLLHV 128
Query: 364 MP 365
+P
Sbjct: 129 VP 130
>SB_13922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 30.3 bits (65), Expect = 2.8
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 178 HNHTYS--APLAAPPHAPTVRDKRVRRLTDGSASDGGSSCTSAQHLSRDE-KRAKALGIP 234
H++ Y AP P + R R+ T S+ S CTSA+H + L IP
Sbjct: 559 HDNIYKQKAPRNGLISDPDGKKIRQRKSTSSSSKSHHSDCTSAEHNRHNTITEDLNLDIP 618
Query: 235 LEVQDIIN---LPMDE 247
+VQ + N LP DE
Sbjct: 619 FDVQQLENEAFLPEDE 634
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 30.3 bits (65), Expect = 2.8
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 259 EAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQ 318
EA++S+IR+++ R +N V RK ++D L +V +R +K+R + + + ER+
Sbjct: 415 EAEISVIREVKIREENSVNV--LRKERVD----LDVQVTNLRSQKIRLEAEISVMKEERR 468
Query: 319 R 319
R
Sbjct: 469 R 469
>SB_43304| Best HMM Match : bZIP_Maf (HMM E-Value=1e-05)
Length = 96
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/71 (21%), Positives = 36/71 (50%)
Query: 257 LSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAE 316
L +++ +R RR KN++ A C+K+++ + + + R + + + + + E
Sbjct: 4 LENSEIVRLRKRRRSLKNRIYASVCKKKRVAEQKTYEVQNRILVKERNTLKMELEKVKTE 63
Query: 317 RQRLKERFAAL 327
R ++KE + L
Sbjct: 64 RDKIKEAYQTL 74
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 29.9 bits (64), Expect = 3.7
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 236 EVQDIINLPMDEFNE-----RLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIT 290
+V D+ N D+ ++ R DL++ + + D+ ++KV ++ K D+++
Sbjct: 252 KVSDLANTKRDKVSDLADTKRDKVRDLADTKRDKVSDLADTKRDKV--KDLADTKRDKVS 309
Query: 291 SLADEVR-TVRDRKLRTQRDHHSLLAERQRLKER 323
LAD R VRD T+RD S LA+ +R K R
Sbjct: 310 DLADTKRDKVRD-LADTKRDKVSDLADTKRDKVR 342
Score = 29.9 bits (64), Expect = 3.7
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 224 DEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRK 283
D KR K + +D + D +++ DL++ + + D+ ++KV+ K
Sbjct: 335 DTKRDKVRDLADTKRDKVRDLADTKRDKV--RDLADTKRDKVSDLADTKRDKVSDLADTK 392
Query: 284 RKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLK 321
R D+++ LAD R + T+RD S LA+ +R K
Sbjct: 393 R--DKVSDLADTKRDKVSDLVDTKRDKVSALADTKRDK 428
>SB_12856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 193 PTVRDKRVRRLTDGSASDGGSSCTSAQHLSRDE-KRAKALGIPLEVQDIIN---LPMDE 247
P + R R+ T S+ S CTSA+H + L IP +VQ + N LP DE
Sbjct: 6 PDGKKIRQRKSTSSSSKSHHSDCTSAEHNRHNTITEDLNLDIPFDVQQLENEAFLPEDE 64
>SB_12314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 29.9 bits (64), Expect = 3.7
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 291 SLADEVRTVRDRKLRTQRDHHSLLAERQRLKERFAALYRHVFQNLRDPEGRPLSS--GQY 348
+L +EV+ ++DR T+RD L+ ER + ++A R+ F N D + + L S Q+
Sbjct: 165 ALIEEVKQIKDRLYATERD---LMNERNAREMQYAK-DRNQFSN-DDQKVKELESKYEQW 219
Query: 349 SLQQAADGNVVLVPKMPQHQDHPMNRTSDDEMERKA 384
+Q+ + L+ Q N ++ ++ E+KA
Sbjct: 220 KMQEDENHRRELMSLRQSLQREIQNMSTQNQQEKKA 255
>SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 934
Score = 29.9 bits (64), Expect = 3.7
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 245 MDEFNERLSKHD-LSEAQLSLIRD--IRRRGKNKVAAQNCR-----KRKLDQITSLADEV 296
+D+F RL D ++ +++ RD + RRGK A++ R RKL Q ADEV
Sbjct: 491 IDDFANRLIDGDHYAKDEVAERRDAVLNRRGKIHEASEARRLKLEESRKLQQFERDADEV 550
Query: 297 RTVRDRKLRTQRD 309
+ + KL+T +D
Sbjct: 551 KVWINEKLKTAKD 563
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/59 (32%), Positives = 24/59 (40%)
Query: 138 VAPPHVAGLQPALELNAPHSSHALLQGAVGPGFGVPERVRHNHTYSAPLAAPPHAPTVR 196
V P H G +P +S G GPG G P + T P +A P AP V+
Sbjct: 289 VLPRHDPGPKPTTSPATTPTSGTEGAGTGGPGTGGPSGSSNPPTTGTPASASPTAPGVK 347
>SB_50833| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.1e-08)
Length = 280
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 176 VRHNHTYSAPLAAPPHAPTVRDKRVRRLTDGSASDGGSSCTSAQ 219
V NH S A P + R K RRL +GG SCT ++
Sbjct: 232 VTTNHECSLAQAKPRNRLKTRSKTKRRLPTIEEEEGGVSCTDSE 275
>SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 269 RRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLKERFAALY 328
R+R +NK AA R +K D+ + L DE + + + + SL E + LK +Y
Sbjct: 450 RKRVQNKDAATRYRVKKKDEQSRLFDEAEKLEKENNKLKDEVGSLSKEIEYLKNLMLEVY 509
Query: 329 R 329
+
Sbjct: 510 Q 510
>SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 29.5 bits (63), Expect = 4.9
Identities = 46/241 (19%), Positives = 85/241 (35%), Gaps = 15/241 (6%)
Query: 136 HQVAPPHVAGLQPALELNAPHSSHALLQGAVGPGFGVPERVRHNHTYSAPLAAPPHAPTV 195
H+V P ++ + A + + + +H+ PG E N T + L P +
Sbjct: 453 HRVLPRNIPSQKDAYSVTSENLNHS-------PGRHHGEYYNANGTMTPTLPQKPTRSSS 505
Query: 196 RD--KRVRRLT--DGSASDG---GSSCTSAQHLSRDEKRAKALGIPLEVQDIINLPMDEF 248
RVR DGS S S C S H DE AK G+ + Q + N
Sbjct: 506 NHFVSRVREANTRDGSCSQKIKPDSLCYSPSHYEHDEVSAKMQGLSIRQQPVANRDRGVA 565
Query: 249 NE-RLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQ 307
++ RL +L L R ++ ++ + Q + + + R+
Sbjct: 566 SDSRLDASELRRVAPELYNMARDAQRSNDLQRSPEGHRYSQRSPIRETEAQRSPVSQRSP 625
Query: 308 RDHHSLLAERQRLKERFAALYRHVFQNLRDPEGRPLSSGQYSLQQAADGNVVLVPKMPQH 367
+S + +R + RH + + + S ++S + D P+ P+
Sbjct: 626 VSQNSPVPQRSPTSKHSPLSQRHSYGSQYSNQDVSPSDSRHSADASRDKEEFTRPRPPER 685
Query: 368 Q 368
+
Sbjct: 686 K 686
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 29.5 bits (63), Expect = 4.9
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 293 ADEVRTVRDRKLRT--QRDHHSLLAERQRLKERFAALYRHVFQNLRDPEGRPLSSGQYSL 350
AD + DR +R ++D SLL E Q +KER +A+ H ++ + ++ + +
Sbjct: 2788 ADAQGELNDRVMRELFRKDRESLLQELQEVKERLSAIRDHPIGEIQQMKEHVIALQEQAK 2847
Query: 351 QQAADGNVVLVPKMPQ 366
++ + + L+ K Q
Sbjct: 2848 RREKELHAQLLAKTRQ 2863
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.5 bits (63), Expect = 4.9
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 148 PALELNAPHSSHALLQGAVGP-GFGVPERVRHNHTYSAPLAAPPHAPTVRDKRV 200
PALE AP S+ A + V P VPE + T AP T+ D V
Sbjct: 1233 PALETTAPESTSASTESTVAPETTAVPETTAAHETTVAPETTVAPETTIADATV 1286
>SB_28288| Best HMM Match : E-MAP-115 (HMM E-Value=0.076)
Length = 784
Score = 29.5 bits (63), Expect = 4.9
Identities = 13/61 (21%), Positives = 25/61 (40%)
Query: 179 NHTYSAPLAAPPHAPTVRDKRVRRLTDGSASDGGSSCTSAQHLSRDEKRAKALGIPLEVQ 238
N Y+AP P ++R+ R D S+G + +S + + + P ++
Sbjct: 12 NLCYTAPRKPKSKIPATENERIHRTLDLDVSEGDGNASSGRKIRSSNSGGSKIQTPKSIR 71
Query: 239 D 239
D
Sbjct: 72 D 72
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 29.5 bits (63), Expect = 4.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 295 EVRTVRDRKLRTQRDHHSLLAERQRLKERFAALYR 329
+V +D+ + + D+H LLAE+ RL+ AA R
Sbjct: 1820 DVVIYQDKYSKLESDYHQLLAEKSRLESELAARVR 1854
>SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)
Length = 762
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 273 KNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLKERFAALYRHV- 331
K K + K + +T+ EV+++RD QRD L +++ +E+ L +
Sbjct: 447 KEKEELERSHKDLNEALTTSVTEVQSLRDELQSKQRDALQLAQLKKQFREQGNELSQATK 506
Query: 332 -FQNLRDPEGRPLSSGQYS 349
+ LR+ + LSS +Y+
Sbjct: 507 ELEELREEHVKLLSSSEYA 525
>SB_41031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 270 RRGKNKVAAQNCRKRKLDQITSL--ADEVRTVRDRKLRTQ 307
RR +NKVAA CR+++ + +L E V++ L++Q
Sbjct: 104 RRERNKVAASKCRQKRKQHVRNLVQVSEALEVQNNTLQSQ 143
>SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25)
Length = 1137
Score = 29.1 bits (62), Expect = 6.5
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 156 HSSHAL-LQGAVGPGFGVPERVRHNHTYSAPLAAPPHAPTVRDKR 199
HS A+ LQ P + P+ +RH H PL PPH P + R
Sbjct: 63 HSLPAIELQRPYFPTYMSPQDLRHFH--KPPLKKPPHGPVAKPGR 105
>SB_29515| Best HMM Match : TolA (HMM E-Value=0.031)
Length = 592
Score = 29.1 bits (62), Expect = 6.5
Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 250 ERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITS--LADEVRTVRDRKLRT- 306
ERL + L EA+ + R R K + A+ RKRK ++ + ++ R R++++R
Sbjct: 363 ERLERVRL-EAEEEMKRREEERRKKREEAERERKRKEEEERNREKQEKARLEREKRMRED 421
Query: 307 -QRDHHSLLAERQRLKERFAALYRHVFQNLRDPEGRPLSSGQYSLQQAADGNVVLVPKMP 365
+R L+A+R +L+E + + L + R +++++ + L KM
Sbjct: 422 FERKKQELIAQR-KLEEEIRREQEKIDRELEEAARREEEERIRNMEESE--RLALQEKM- 477
Query: 366 QHQDHPMNRTSDDEMERK 383
+ ++ + R +D+ R+
Sbjct: 478 RREEEELRRRLEDQRRRE 495
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 235 LEVQDIINLPMDEFNE-RLSKHDLSEAQLSLIRDIRRR-GKNKVAAQNCRKRKLDQITSL 292
L V + +D NE +S + L+L+ + ++ + V K K+D + SL
Sbjct: 1585 LNVYQQLKTALDASNEDNVSLRERENKHLALLAESEKKIDELMVQKDKLLKEKVDLVNSL 1644
Query: 293 ADEVRTVRDRKLRTQRDHHSLLAERQR 319
+++ + D K + ++ LL E+ R
Sbjct: 1645 HEKMSEMNDEKDKLDDENKQLLDEKSR 1671
>SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07)
Length = 827
Score = 29.1 bits (62), Expect = 6.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 197 DKRVRRLTDGSASDGGSSCTSAQHLSRDEKRAK 229
+KR+RRLT SD SS Q L +D ++AK
Sbjct: 73 NKRLRRLTSSDHSDYMSSTLPYQPLKQDNRQAK 105
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 28.7 bits (61), Expect = 8.5
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 241 INLPMDEFNERLSKHDLSEAQLSLIRD----IRRRGKNKVAAQNCRKRKLDQITSLADEV 296
I L E N+RL + + + Q L R +RR+ + K + R+R L+++ L E
Sbjct: 188 IRLIQLELNQRLYRQRMRQLQRRLERKRRQRLRRQERRKRHLERQRQRYLEKLRRLKHEK 247
Query: 297 RTVRDRKLRTQ--RDHHSLLAERQRLKE 322
R ++LR Q R L E++ +E
Sbjct: 248 HLRRLKRLREQWGRRQRQLAREKRIRRE 275
>SB_39672| Best HMM Match : Peptidase_M20 (HMM E-Value=9.9e-09)
Length = 702
Score = 28.7 bits (61), Expect = 8.5
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 250 ERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQ-ITSLADEVRTVRDRKLRTQR 308
E+ S H++ E Q S + +R+ K+K +K DQ + L + + R R + Q+
Sbjct: 80 EKTSLHEMIENQSSEMSKLRQELKDKEVETRIASKKGDQLVKDLKRQFKLERKRADQLQQ 139
Query: 309 DHHSLLAERQRLKERFAALY 328
L+E R K+ F ++
Sbjct: 140 KLQEALSE-NRAKQSFDEMF 158
>SB_771| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.27)
Length = 506
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 289 ITSLADEVRTVRDRKLRTQRDH----HSLLAERQRLKERFAALYRHVFQNL--RDPEGRP 342
ITSL +E+R +R + +++ D+ + E ++ KE L R + + + R+ R
Sbjct: 433 ITSLREEIRRLRQQLAKSEADYCEKMEAYAKEERQTKEENIRLQRKLLREMERREALSRQ 492
Query: 343 LSSGQYSLQ 351
LS + SL+
Sbjct: 493 LSESESSLE 501
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,487,200
Number of Sequences: 59808
Number of extensions: 515851
Number of successful extensions: 1762
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1721
Number of HSP's gapped (non-prelim): 67
length of query: 389
length of database: 16,821,457
effective HSP length: 83
effective length of query: 306
effective length of database: 11,857,393
effective search space: 3628362258
effective search space used: 3628362258
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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