Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001759-TA|BGIBMGA001759-PA|undefined
         (412 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    26   0.57 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    24   2.3  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   7.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   9.2  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.57
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 323 YIISMELVHTKEV-DIDKLVSVLESIPTKMMGSK 355
           Y +S+ ++H ++  DID L S +ES P K + SK
Sbjct: 125 YALSVAILHRQDTQDID-LPSFIESFPDKYVDSK 157


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 283 LGQIREKYKRMLETYRDARDRYTNRTL 309
           L QIR+ Y + LE Y  A + +T   +
Sbjct: 151 LAQIRQIYHQELEKYEQACNEFTTHVM 177


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 9/39 (23%), Positives = 23/39 (58%)

Query: 248 KLSLELLQDSKLKLRQIRDIVDEHSVVVAFQIGYILGQI 286
           K+S+ L++D+ +  R + D V   + +  + + ++ G+I
Sbjct: 147 KISVGLIRDTAVLYRLLADNVANFNKIFGWSLIFLFGRI 185


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 11/49 (22%), Positives = 25/49 (51%)

Query: 264 IRDIVDEHSVVVAFQIGYILGQIREKYKRMLETYRDARDRYTNRTLLAG 312
           ++D+++    ++   +G  L Q+ + +K +LE + +   RY    L  G
Sbjct: 370 LKDVIEIVDKLLNPDLGLSLLQVAQIFKNLLENHYEEFVRYELGELAPG 418


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.137    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,759
Number of Sequences: 317
Number of extensions: 3709
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 412
length of database: 114,650
effective HSP length: 58
effective length of query: 354
effective length of database: 96,264
effective search space: 34077456
effective search space used: 34077456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)