Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001756-TA|BGIBMGA001756-PA|undefined
(202 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 35 0.053
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 32 0.28
SB_39770| Best HMM Match : TolA (HMM E-Value=0.33) 31 0.66
SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032) 31 0.66
SB_48008| Best HMM Match : M (HMM E-Value=0.0068) 31 0.87
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 29 2.0
SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17) 29 2.0
SB_23774| Best HMM Match : Kinesin (HMM E-Value=0) 29 2.0
SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23) 29 2.7
SB_45735| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09) 29 3.5
SB_31644| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_31417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 29 3.5
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 3.5
SB_16002| Best HMM Match : Clathrin (HMM E-Value=1.1) 28 4.6
SB_43496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 28 4.6
SB_11172| Best HMM Match : LTXXQ (HMM E-Value=1.9) 28 4.6
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 28 4.6
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 28 6.1
SB_9369| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 28 6.1
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 27 8.1
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 34.7 bits (76), Expect = 0.053
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 59 PVSLTPQITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRAL--DAE 116
P SLT ++ + K EE + E+G + I+ KV V Q T D +A
Sbjct: 1177 PSSLTEKLQPETKYEEYVDEHGQI--IRRTTKVKHTAVKQERTTVTKTVTRDGVTTREAN 1234
Query: 117 MLTRKQNIMEALTNYRDKETSLRHFEMI 144
++ + + YRD+E+S+R + I
Sbjct: 1235 VIESPPEVESSTQVYRDEESSVRDIKPI 1262
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 32.3 bits (70), Expect = 0.28
Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 3/181 (1%)
Query: 2 SAFKT-LKEVSQNFEQELKQLSNVLFSAKIGETFEDAVXXXXXXXXXXXXXXXXXRAKPV 60
+A KT ++E+++ E L+++S + K+ E D V R
Sbjct: 1053 AALKTQIQELTKVKENALREISELKLQLKMAEEARDGVRRELIDAHRKIREGEEAREVAR 1112
Query: 61 SLTPQITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTR 120
+ Q+K EE K+ A +L KV +T+ ++L + E
Sbjct: 1113 KENTDLKRQLKDEEREKDAVSHTANELRGKVKKSEAEKTNLRRQLDEASQKIASLEETRN 1172
Query: 121 --KQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVSDDEE 178
++ + + R+ E + LQ+ + +L E KS E+ D+K ++ DE
Sbjct: 1173 GLQKEAGDLRGSLREVEKARLEARRELQQLHNQVKMLDGECLKSKKEISDLKDQLAKDEH 1232
Query: 179 M 179
+
Sbjct: 1233 L 1233
>SB_39770| Best HMM Match : TolA (HMM E-Value=0.33)
Length = 732
Score = 31.1 bits (67), Expect = 0.66
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 69 QVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEAL 128
Q + + +++ GD A LE+ + + A++KL T R + E ++ EAL
Sbjct: 261 QKEHDAVMRTLGDKAREDTLEEEAMLQEGKQDALRKLRQTIQREREEEEAALRKEKEEAL 320
Query: 129 TNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVSDDEEMDTNSAYY 186
R E + +E++ + + LR E ++SL +LR+ A + E+ Y+
Sbjct: 321 DAVR---------EELEEEQEEKESRLRDEKEQSLRKLRESLAREHEKEKRKIEEEYH 369
>SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032)
Length = 1293
Score = 31.1 bits (67), Expect = 0.66
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 113 LDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLR---AEWDKSLGELRDM 169
L+ ++ T K+++ + ++ ETS+ ++ L+EK E++LLR A+ KSL E D+
Sbjct: 1185 LERQVSTLKRDVDMLNSRLQNGETSVDSLKLDLREKGAENDLLRLEIAKITKSLKEKEDL 1244
Query: 170 KAAVSDDEEMD 180
+ + E +
Sbjct: 1245 LGSAGEKHEAE 1255
>SB_48008| Best HMM Match : M (HMM E-Value=0.0068)
Length = 1068
Score = 30.7 bits (66), Expect = 0.87
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 65 QITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRAL--DAEMLTRKQ 122
Q+ E+VK +KE G+ A+KL + T + ++I + + L + LT K+
Sbjct: 312 QLQEEVKA---LKEIGE-GAVKLQALPLPE--GMTPSSSEIIASLNEHLIYTLQELTLKE 365
Query: 123 NIMEALTNYRDKETSLRHFEMILQEKQY---EHNLLRAEWDKSLGELRDMKAAVSDDEEM 179
++ + +D ET R F +++ ++ E+N + EW+K L + + A E
Sbjct: 366 ELLGKME--KDLETYRRKFSVVIHQQGLLYDEYNQKKQEWEKESQALDEARKAAELAREQ 423
Query: 180 DT 181
DT
Sbjct: 424 DT 425
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 113 LDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLR---AEWDKSLGELRDM 169
L+ ++ T K+++ + ++ ETS+ ++ L+EK E++LLR A+ KSL E D+
Sbjct: 1241 LERQVSTLKRDVDMLNSRLQNGETSVDSLKLDLREKGAENDLLRLEIAKITKSLKEKEDL 1300
Query: 170 KAAVSDDEEMD 180
+ + E +
Sbjct: 1301 LGSAGERHEAE 1311
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 77 KEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKET 136
KE G + E+ T K + + +A D + L K ++ +LTN +ET
Sbjct: 765 KERGSSKDVMYTEE-TAKLFYEASVFLNVCREKVKAQDLQRL--KLEVLSSLTNSPSEET 821
Query: 137 S--LRHFEMILQEKQYE 151
L HF++ LQ KQY+
Sbjct: 822 MAYLNHFKVPLQNKQYK 838
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 29.5 bits (63), Expect = 2.0
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 65 QITEQVKTEEI-IKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQN 123
Q+ +++K E KE D L+EK V + T + L+ L K+
Sbjct: 17 QLKKKLKEERNEAKETSDKLNAALVEKGNDLAVLRAE-----FETTMKELEQSYLREKEE 71
Query: 124 IMEAL-----TNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVSDDEE 178
I++ L N ++KE + E LQEK+ + +R D+++ EL KA + + E
Sbjct: 72 IIKRLGSELDDNVQEKERMIEELEAKLQEKELDVQSVRDAKDRNIEEL---KAKLQEREA 128
Query: 179 M 179
M
Sbjct: 129 M 129
>SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17)
Length = 1426
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 127 ALTNYRDKETSLRHFEMILQEK-QYEHNLLRAEWDKSLGELRDMKAAVSDDEEMD 180
A+ +RD+ + +R I +EK YE L + E L E+R++ A ++E++
Sbjct: 579 AMAEWRDRVSRIRMGYKIAEEKLSYEEPLTKLEISDKLEEIRELNAVPFINQELN 633
>SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 805
Score = 29.5 bits (63), Expect = 2.0
Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Query: 62 LTPQITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDA---EML 118
L +I + K E K+ D KLL V V + ++ I ++ D + L
Sbjct: 172 LEGEIEGKNKALEEAKKRIDELEQKLLANVPVDTAKEIQTYREKINDLEKTQDKLAKDNL 231
Query: 119 TRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVSDDEE 178
+K ++ +L + + +E Q + +R E DK + E ++ KA ++
Sbjct: 232 AQKASVSTLTAKLETATNNLERLKKLEKELQDTNKKMRLEKDKEVKEAKE-KADTKSKQK 290
Query: 179 MDTNS 183
+D N+
Sbjct: 291 IDDNN 295
>SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23)
Length = 1178
Score = 29.1 bits (62), Expect = 2.7
Identities = 29/136 (21%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 58 KPVSLTPQITEQVKTEEIIK--EYGDVAAIKLLEKVT-----VKCVAQTHAVKKLITTPD 110
+ V L ++ E EE +K + DVA K+L++ +K + + T
Sbjct: 125 REVELKVKMVEAKFHEEKLKLQQQHDVAVQKILDRKNMELEEIKAHYRNKVTEMETTIKK 184
Query: 111 RALDAEMLTRKQN--IMEALTNYRDK----ETSLRHFEMILQEKQYEHNLLRAEWDKSLG 164
+E++ ++N + E +YR+K ET+++ E + E + L+ + DK +
Sbjct: 185 HERKSELILDRKNMELEEIKAHYRNKVTEMETTIKKHERKISSMTRESSTLKEQKDKQIN 244
Query: 165 ELRDMKAAVSDDEEMD 180
EL+ + ++ + D
Sbjct: 245 ELKSLVEQSGENAQHD 260
>SB_45735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 29.1 bits (62), Expect = 2.7
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 62 LTPQITEQVKTEEIIKEYGDVAA--IKLLEKVT--VKCVAQTH---AVKKLITTPDRALD 114
L IT+Q EE +++ D+A + L K+T V+ Q H +VKK + D AL+
Sbjct: 251 LDAMITQQTSPEEAYRKFDDMATKQTETLRKLTKLVQEARQNHDDESVKKAVNEYDEALE 310
Query: 115 --AEMLTRKQNIMEALTNYRDKETSLR 139
+L + I L NY E R
Sbjct: 311 RYIPVLMAQAKIYWDLENYAQVEKIFR 337
>SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09)
Length = 816
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 97 AQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLR 156
A+ A K I+T + E + + +A ++ SL +F M++ + + N L
Sbjct: 325 AEAEAANKGISTDTSDIPMETVQTTETAQDAKEETEPEKGSL-YFRMLVTSETDKLNKLC 383
Query: 157 AEWDKSLGELRDMKAAVS 174
A WDK L E ++ V+
Sbjct: 384 ACWDKVLEEEEELSDEVT 401
>SB_31644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 935
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 112 ALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGEL 166
AL+A + +++ +++ R+ ETS F L KQ E +RA+ + L E+
Sbjct: 250 ALNAALREKEKQLLQLTKKVRELETSNNEFGASLSSKQEELESVRAQEELVLKEV 304
>SB_31417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 58 KPVSLTPQITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAV 102
+P+ P TE +K I+E+ V IKLL + K H++
Sbjct: 3 QPLYALPHNTESLKESISIEEFMQVTFIKLLSNIVYKLFEFNHSI 47
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 28.7 bits (61), Expect = 3.5
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 89 EKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRH-FEMILQE 147
EK + + KKL+TT +AL E+ KQ E +++ + L++ FE +
Sbjct: 1013 EKERTETATRAEREKKLLTTTIQALTKELDKVKQQKKEMKKSFKRSKGDLQNSFEN--ER 1070
Query: 148 KQYEHNLLRA-EWDKSLGE 165
KQ+E +L ++ E K L E
Sbjct: 1071 KQFEDSLEKSKEVGKMLAE 1089
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 122 QNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVSD 175
Q I EA D E + R + +L++++ EH ++ + + +LR K ++ D
Sbjct: 53 QQIAEAKEVIGDMEAAYRQLKAMLEDQKKEHMAEVRKFQREIDDLRRQKRSLED 106
>SB_16002| Best HMM Match : Clathrin (HMM E-Value=1.1)
Length = 977
Score = 28.3 bits (60), Expect = 4.6
Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 59 PVSLTPQITEQVKTE-EIIKEYG---DVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALD 114
P SL +ITE+ I+ ++G + ++ L K+ + ++ + +T + +
Sbjct: 293 PNSLLAKITEKANDNARIVTKFGVIDSLISLNRLNKIAKPNIVFDYSTEVSLTRASKMDE 352
Query: 115 AEMLTRKQNIMEALTN-YRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAV 173
AE L + + L Y+ + E+ + + K L + +M AA+
Sbjct: 353 AEKLYKNSQRFDLLNQLYQASNQWTKAIEVAELHDRIHLRTTYYNYAKHLESMGNMSAAI 412
Query: 174 SDDEEMDTNSAYYVLVLLD 192
+ E+ DT+ +LLD
Sbjct: 413 VNYEKSDTHRFEVPRMLLD 431
>SB_43496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 28.3 bits (60), Expect = 4.6
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 60 VSLTPQITEQVKTE-EIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEML 118
VS I Q+K+E +I A K L +C + K + +M+
Sbjct: 213 VSKRNTIIAQLKSELSMINNVTHEAQRKTLSDAAKQCSTEI----KTSENKKMTIREDMI 268
Query: 119 TRKQNIMEALTNYRDKETSLRHFEMILQEKQYE 151
T+++++ + +R++ET LR E+ K YE
Sbjct: 269 TKRKHVRDRRREHREEETVLRKDELDKVAKLYE 301
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 110 DRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWD 160
++ L + + +IMEA + + +R E + Q+ + EH+ L+ E D
Sbjct: 222 EQELSTRLKLKDNDIMEANVRLGEMQQKIRRLEALCQDFKKEHSSLKNERD 272
>SB_11172| Best HMM Match : LTXXQ (HMM E-Value=1.9)
Length = 142
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 138 LRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVSDDEEMDTNSAYYVLVLLDLYKR 196
L H+ + E+ E N LRAE +KS LR + ++ ++ T + +L+++ +KR
Sbjct: 78 LEHYRDLNIEQDDEINKLRAELEKSADMLR--RERIARRRKLPTTPSESMLIIIPWHKR 134
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 135 ETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVS-DDEEMDTNSAYYV 187
ET+ F L+EK+Y LRAE S G++ ++ ++ E + N YV
Sbjct: 754 ETAKEGFRKELREKEYLIEKLRAEKSASDGQIESLRRQITYVQSEKEKNVTLYV 807
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/93 (18%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 77 KEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKET 136
++ GD+ + L+EK+ K A+ + + +T ++ E+ + + E + D+E
Sbjct: 96 QQEGDIKS--LMEKIASK-EAELRELGEKLTKSEQEKSDELGKVWETMTELQSVIEDREK 152
Query: 137 SLRHFEMILQEKQYEHNLLRAEWDKSLGELRDM 169
S+ E L++++ +HN + ++++ +++++
Sbjct: 153 SIDKLEKELKDQEAKHNRQKNTLEQTVAKMKEV 185
>SB_9369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 27.9 bits (59), Expect = 6.1
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 88 LEKVTVKCVAQ-THAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHF--EMI 144
LEK V+ A+ A+K L+ + +D+E ++ + EA+ R+K T H EM
Sbjct: 294 LEKTLVEERAKHAEAMKDLMKSIQTVVDSERAQGREAVEEAINTTRNKMTEYLHHKQEMD 353
Query: 145 LQEKQYEHNLLRAEWDKSLGELRD-MKAAVSDDEEMDT 181
Q + + + + + +L++ M++ ++D + DT
Sbjct: 354 AQVRLRQFAAMDLFLEGTRAQLKNLMESTQTNDHKNDT 391
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 111 RALDAEMLTRKQNIMEALTNYRDKETSLR-HFEMILQEKQYEHNLLRAEWDKSLGE 165
R D EM R + E+L + + L+ +E I++EK+ E +LR +D+++ E
Sbjct: 11 REKDNEMKERLTAVYESLKSKERELMDLQTEYEDIIREKEEELTILRKAFDENIRE 66
>SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 27.9 bits (59), Expect = 6.1
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 68 EQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEA 127
E V +E I+E E ++C T L+ + DA+ ++ I++
Sbjct: 584 ENVFYQEKIRELEKELEESQAEVDDLQCRCNT--TNDLLHIEEEKWDAKERGKEAEILDL 641
Query: 128 LTNYRDKETSLRHFEMILQEKQYEHNLLRA 157
N D + ++ EM L+E++ E LRA
Sbjct: 642 QANLEDAKNIIKDLEMELEEREQEVVSLRA 671
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/89 (20%), Positives = 42/89 (47%)
Query: 92 TVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYE 151
T K +++ + + + + L E+L K+ + L D E L +M +E +
Sbjct: 2332 TRKKISELESDRNNLMAENENLKEELLDTKEVLERTLVKLGDAEADLLKLQMQNKELETS 2391
Query: 152 HNLLRAEWDKSLGELRDMKAAVSDDEEMD 180
NL++ E D+ EL+ + +++ + ++
Sbjct: 2392 LNLVQEENDRIRPELQITQEQLAEQKVLN 2420
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.5 bits (58), Expect = 8.1
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 114 DAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAV 173
+ EML+R + E L + + + E L+E++ EH L E + +L D +
Sbjct: 2192 EVEMLSRVNELQEELAKALESAEAGKKAEKQLKEQESEHVELSREKEALQKQLYDRLTEI 2251
Query: 174 SD-DEEMDTN 182
S EE+ N
Sbjct: 2252 SSLKEELSRN 2261
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.129 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,345,808
Number of Sequences: 59808
Number of extensions: 171723
Number of successful extensions: 617
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 599
Number of HSP's gapped (non-prelim): 38
length of query: 202
length of database: 16,821,457
effective HSP length: 79
effective length of query: 123
effective length of database: 12,096,625
effective search space: 1487884875
effective search space used: 1487884875
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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