Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001752-TA|BGIBMGA001752-PA|IPR002048|Calcium-binding
EF-hand
(124 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.006
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.21
SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23) 30 0.63
SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12) 29 1.5
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 29 1.5
SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24) 29 1.5
SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078) 28 1.9
SB_57811| Best HMM Match : efhand (HMM E-Value=4.3e-05) 28 1.9
SB_36482| Best HMM Match : efhand (HMM E-Value=6e-06) 28 1.9
SB_30172| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.9
SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11) 28 2.6
SB_49389| Best HMM Match : JmjC (HMM E-Value=0.095) 27 3.4
SB_48677| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_29434| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-25) 27 3.4
SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25) 27 3.4
SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25) 27 3.4
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 27 3.4
SB_56418| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-35) 27 3.4
SB_21444| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26) 27 4.5
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43) 27 4.5
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 27 4.5
SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_44628| Best HMM Match : efhand (HMM E-Value=2.8e-11) 27 5.9
SB_37561| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_30984| Best HMM Match : efhand (HMM E-Value=2) 27 5.9
SB_4639| Best HMM Match : Saccharop_dh (HMM E-Value=3e-06) 27 5.9
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.8
SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26) 26 7.8
SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14) 26 7.8
SB_11953| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.8
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.8
SB_30673| Best HMM Match : efhand (HMM E-Value=0.00017) 26 7.8
>SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 36.7 bits (81), Expect = 0.006
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 30 VDKNYRVYTDDQLEAVLEQALKHTDLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVHVVL 89
+D N + +T E+ +EQ D N DG V + EY +Y K + S ++ H+
Sbjct: 105 IDVNMKKHTRKSSESRMEQM----DKNKDGKVSWEEYVNVEYDPKNEKGMSNENKDHLKE 160
Query: 90 YKDEDLSEIVEGALKQADMNNDGYIEYAEFR 120
K D E K ADM+ND + E +
Sbjct: 161 MKKRD-----EKRWKHADMDNDNLLTIDELQ 186
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 31.5 bits (68), Expect = 0.21
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 97 EIVEGALKQADMNNDGYIEYAEFRTVAM 124
E VE +KQADM+ DG+I Y EF+ M
Sbjct: 125 EAVE-LVKQADMDGDGHINYEEFKNAFM 151
Score = 31.1 bits (67), Expect = 0.27
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 48 QALKHTDLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVHVVLYKDEDL---SEIVEGALK 104
+ +K D++ DG+++Y E++ K D++ ++ + L E ++ +K
Sbjct: 128 ELVKQADMDGDGHINYEEFKNAFMSFDKNVDGRIDAEELEIVTRSIGLHPKDEELKAMIK 187
Query: 105 QADMNNDGYIEYAEF 119
QAD + G I+ EF
Sbjct: 188 QADKDGSGDIDLPEF 202
>SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23)
Length = 308
Score = 29.9 bits (64), Expect = 0.63
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 36 VYTDDQLEAVLEQALKHTDLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVHVVLYKDEDL 95
V+ +E V + LK D N DG VD++EY Y Q D ++ L +D
Sbjct: 100 VFKKRSMEGV-DNDLKEKDANEDGKVDWNEYSKGTY----GDQTEDDEEMKEFLRRD--- 151
Query: 96 SEIVEGALKQADMNNDGYIEYAE 118
+ AD N DG++ E
Sbjct: 152 ----KRRFDAADTNKDGFLTREE 170
>SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.1 bits (62), Expect = 1.1
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 43 EAVLEQALKHTDLNNDGYVD-YSEYRFNDYKAKKARQKSPDSDVHVVLYKDEDLSEIVEG 101
E +LE K T+ D ++ ++ N K K ++ K +++ YK D S
Sbjct: 14 EEILELR-KTTEFTEDELQKWFAAFKNNCPKGKMSQSKF--CEMYAKSYKTGDASIFAGH 70
Query: 102 ALKQADMNNDGYIEYAEF 119
+ D NNDG I++ EF
Sbjct: 71 VFRTFDKNNDGTIDFNEF 88
>SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12)
Length = 567
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 46 LEQALKHTDLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVHVVLYKDED 94
++ A H D N++ Y DY+ Y NDY + D + + +Y+D+D
Sbjct: 109 MQNAQYHKDYNDNDYDDYN-YDDNDYDNDDYDDYNYDDNDYDDVYEDDD 156
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 28.7 bits (61), Expect = 1.5
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 17/74 (22%)
Query: 46 LEQALKHTDLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVHVVLYKDEDLSEIVEGALKQ 105
LE+ + D +N GY+D++E A +K D+++ S ++G LK
Sbjct: 70 LEKIFQEIDEDNSGYIDHNEI-------SNALKKL---DINLP-------SRQIDGILKG 112
Query: 106 ADMNNDGYIEYAEF 119
D+NND I++ EF
Sbjct: 113 MDLNNDNRIDFDEF 126
>SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24)
Length = 176
Score = 28.7 bits (61), Expect = 1.5
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 43 EAVLEQALKHTDLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVHVVLYKDEDLSEIVEGA 102
E+ L+ A + D++NDGY+ E F K K+ L +IV+
Sbjct: 110 ESKLKFAFRIYDMDNDGYISNGEL-FQVLKMMVGNN-----------LKETQLQQIVDKT 157
Query: 103 LKQADMNNDGYIEYAEF 119
+ AD + DG I ++EF
Sbjct: 158 ILNADKDGDGKICFSEF 174
>SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078)
Length = 788
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 85 VHVVLYKDEDLSEIVEGALKQADMNNDGYIEYAEFRT 121
V + +D D+ E++E L ++ +DG I+Y E++T
Sbjct: 491 VKYLALEDNDIEEMIEN-LDLKELKDDGVIDYEEWKT 526
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 25 IFKRQVDKNYRVYTDDQLEAVLEQALKHTDLNNDGYVDYSEYR 67
IF +V Y D+ +E ++E L +L +DG +DY E++
Sbjct: 486 IFAERV--KYLALEDNDIEEMIEN-LDLKELKDDGVIDYEEWK 525
>SB_57811| Best HMM Match : efhand (HMM E-Value=4.3e-05)
Length = 70
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 102 ALKQADMNNDGYIEYAEFRTV 122
A ++ D+ NDGY+ EFR+V
Sbjct: 11 AFRKLDLQNDGYLSIPEFRSV 31
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 46 LEQALKHTDLNNDGYVDYSEYR 67
L +A + DL NDGY+ E+R
Sbjct: 8 LRKAFRKLDLQNDGYLSIPEFR 29
>SB_36482| Best HMM Match : efhand (HMM E-Value=6e-06)
Length = 190
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 37 YTDDQLEAVLEQALKHTDLNNDGYVDYSE 65
+ D + EA++++ L+ D N DG + +SE
Sbjct: 124 FLDHEAEAIVDEMLEKHDKNKDGMLQFSE 152
>SB_30172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 701
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 102 ALKQADMNNDGYIEYAEFRTV 122
A ++ D+ NDGY+ EFR+V
Sbjct: 642 AFRKLDLQNDGYLSIPEFRSV 662
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 46 LEQALKHTDLNNDGYVDYSEYR 67
L +A + DL NDGY+ E+R
Sbjct: 639 LRKAFRKLDLQNDGYLSIPEFR 660
>SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11)
Length = 497
Score = 27.9 bits (59), Expect = 2.6
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 31 DKNYRVYTDDQLEAVLEQALKHTDLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVHVVLY 90
DKN ++ + +QL +L++ L L VD FN K+R SP+ + +
Sbjct: 410 DKNGKMKSKNQLLTILKEYLIEKRLRA---VDL----FNCLDKDKSRSVSPEELIEGLKR 462
Query: 91 KDEDLSEI-VEGALKQADMNNDGYIEYAEFRTVAM 124
L++ ++ + D + DG I+Y+EF V M
Sbjct: 463 ARIPLTDSQLKRLITLLDKDGDGMIDYSEFAAVNM 497
>SB_49389| Best HMM Match : JmjC (HMM E-Value=0.095)
Length = 486
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 16 IGQTFNNNNIFKRQVDKNYRVYTDDQLEAVLEQA---LKHTDLNNDGYV---DYSEYRFN 69
+G T ++F+R +D+ + + DD+ + + K+ D G+V D F+
Sbjct: 367 VGVTQLTADLFQRFIDETFELEEDDERKLKRDPVKLFAKYLDKEKKGFVTVEDIKNVPFD 426
Query: 70 DYKAKKARQKSPDSDVH 86
+ KA R + P +H
Sbjct: 427 NLKAIALRCEPPHGPIH 443
>SB_48677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 99 VEGALKQADMNNDGYIEYAEFRTVAM 124
V+ L +AD N+DG ++Y EF + M
Sbjct: 181 VQSILDEADYNHDGKLDYNEFCNMIM 206
>SB_29434| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-25)
Length = 416
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 35 RVYTDDQLEAVLEQALKH-TDLNNDGYVDYSEYRFNDYK 72
R + + E + L H +D +NDGY YS R D K
Sbjct: 347 RCFKPEHFEELKTVQLHHFSDASNDGYSQYSYLRIEDRK 385
>SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 191
Score = 27.5 bits (58), Expect = 3.4
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Query: 12 FDSHIGQTFNNNN---IFKRQVDKNYRVYTDDQLEAVLEQALKHTDLNNDGYVDYSEYRF 68
F H+ +TF+ N I R+ V + +LE L+ A DL+ +GY+ E
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFICALSVTSRGKLEEKLKWAFSMYDLDGNGYISRQEM-- 121
Query: 69 NDYKAKKARQKSPDSDVHVVLYKDEDLSE-IVEGALKQADMNNDGYIEYAEF 119
+ +A K S + + +DE E + +Q D N DG + AEF
Sbjct: 122 --LEIVRAIYKMVGSVMK--MPEDESTPEKRTDKIFRQMDKNLDGKLSLAEF 169
>SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 190
Score = 27.5 bits (58), Expect = 3.4
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Query: 12 FDSHIGQTFNNNN---IFKRQVDKNYRVYTDDQLEAVLEQALKHTDLNNDGYVDYSEYRF 68
F H+ +TF+ N I R+ V + +LE L+ A DL+ +GY+ E
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFICALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEM-- 121
Query: 69 NDYKAKKARQKSPDSDVHVVLYKDEDLSE-IVEGALKQADMNNDGYIEYAEF 119
+ +A K S + + +DE E + +Q D N DG + AEF
Sbjct: 122 --LEIVRAIYKMVGSVMK--MPEDESTPEKRTDKIFRQMDKNLDGKLSLAEF 169
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 83 SDVHVVLYKDEDLSEIVEGALK 104
S+ H++L K EDL E+++G +K
Sbjct: 45 SNCHLLLVKVEDLEELIQGIIK 66
>SB_56418| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-35)
Length = 1898
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 35 RVYTDDQLEAVLEQALKH-TDLNNDGYVDYSEYRFNDYK 72
R + + E + L H +D +NDGY YS R D K
Sbjct: 327 RCFKPEHFEELKTVQLHHFSDASNDGYSQYSYLRIEDRK 365
>SB_21444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 11 GFDSHIGQTFNNNNIFKRQVDKNYRVYTDDQLE----AVLEQALKHTDLNNDGYVDYSEY 66
G +G ++ + + DK++ + +DQ+ VL++ + D + G +DY E+
Sbjct: 24 GSKDDLGSAGSDKQLSFLEEDKHHAIRLEDQMNNEHLEVLQRIFEEADEDGGGGLDYEEF 83
Query: 67 R 67
R
Sbjct: 84 R 84
>SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 27.1 bits (57), Expect = 4.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 91 KDEDLSEIVEGALKQADMNNDGYIEYAEF 119
+DE++S + E + + D + DG++ EF
Sbjct: 996 RDEEISRMREHVMNEIDKDKDGFVSQDEF 1024
>SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26)
Length = 776
Score = 27.1 bits (57), Expect = 4.5
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 12 FDSHIGQTFNNNN---IFKRQVDKNYRVYTDDQLEAVLEQALKHTDLNNDGYVDYSEYRF 68
F H+ +TF+ N I R+ V + +LE L+ A DL+ +GY+ E
Sbjct: 64 FAEHVFRTFDKNGDGTIDFREFICALSVTSRGKLEQKLKWAFNMYDLDGNGYISRQEM-- 121
Query: 69 NDYKAKKARQKSPDSDVHVVLYKDEDLSE-IVEGALKQADMNNDGYIEYAEF 119
+ +A K S + + +DE E E +Q D N DG + EF
Sbjct: 122 --LEIVQAIYKMVGSVMK--MPEDESTPEKRTEKIFRQMDKNLDGKLSLEEF 169
>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
Length = 779
Score = 27.1 bits (57), Expect = 4.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 52 HTDLNNDGYVDYSEYRFN 69
H D+N+DG+VD+ E+ N
Sbjct: 585 HCDVNSDGHVDFQEFLNN 602
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 40 DQLEAVLEQALKHTDLNNDGYVDYSEYR 67
++LE L QA + D N DGY+ E R
Sbjct: 213 EKLEENLRQAFRVFDRNGDGYISAEELR 240
>SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.1 bits (57), Expect = 4.5
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 27 KRQVDKNYRVYTDDQLEAVLEQALKHTDLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVH 86
K + K RV D LE + L D V SE R N+ K+ ++ +SD+
Sbjct: 319 KEALKKAARVQKDRVLERDKDIENLQQKLT-DREVALSEVRRNEGSVKQEKENL-ESDMS 376
Query: 87 VVLYKDEDLSEIVEGALKQADMNND 111
+ + +L EI+E K A N +
Sbjct: 377 TLRSRLRELQEIIENTEKAAQSNTE 401
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 27.1 bits (57), Expect = 4.5
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 27 KRQVDKNYRVYTDDQLEAVLEQALKHTDLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVH 86
K Q D +++EA L+QALK L + D + + + KA K+ +H
Sbjct: 373 KLQEDFESMKKNKEEVEAALQQALKDLGL----FKDELKTTCEELTSAKADSKAKQHKIH 428
Query: 87 VVLYKDEDLSEIVEGALKQADMNNDGYIEYAE 118
+ K ++L +V+ + + D + E
Sbjct: 429 EMEKKRDELQVLVQCLTDKLEKTRDELVTLKE 460
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 91 KDEDLSEIVEGALKQADMNNDGYIEYAEFRTV 122
K+ D E ++ A K D N DG I +E + V
Sbjct: 357 KETDTEEEIQDAFKVFDKNGDGMISSSELKLV 388
>SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 69 NDYKAKKARQKSPDSDVHVVLYKDEDLSEIVEGALKQADMNNDGYIEY 116
N K KK R +S SD+ EDL+ I +G + +N+ + Y
Sbjct: 621 NRKKGKKTRPRS--SDIQAACVFPEDLTAISDGRSPEGASDNNSALRY 666
>SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 52 HTDLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVHVVLYKDE 93
+ DLN+D Y DY + K K + + ++DV+V + D+
Sbjct: 586 NVDLNDDDYDDYDDDDNEGSKMVKVQWEDYENDVNVDVNDDD 627
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 52 HTDLNNDGYVDYSEYRFNDY 71
+ ++N+D Y DY +Y NDY
Sbjct: 657 NVNVNDDDYDDYDDYDDNDY 676
>SB_44628| Best HMM Match : efhand (HMM E-Value=2.8e-11)
Length = 205
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 88 VLYKDEDLSEIVEGALKQADMNNDGYIEYAEFR 120
V DE L+ I + A+ AD + D I +AE +
Sbjct: 161 VTISDEHLTGIADRAISDADTDGDKLISFAELK 193
>SB_37561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1209
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 71 YKAKKARQKSPDSDVHVVLYKDEDLSEIVEGALK 104
+K ++ R+ P V+L +D+D+S + GA++
Sbjct: 1020 WKRRRRRRPPPSKTDSVLLDQDDDISAVTTGAIE 1053
>SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 88 VLYKDEDLSEIVEGALKQADMNNDGYIEYAEFR 120
V + + D+ +++ D+N+ GYIE AE +
Sbjct: 3 VAHYNHDVDSMIQDIFYHWDLNHSGYIEKAELK 35
>SB_30984| Best HMM Match : efhand (HMM E-Value=2)
Length = 37
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 88 VLYKDEDLSEIVEGALKQADMNNDGYIEYAEFR 120
V DE L+ I + A+ AD + D I +AE +
Sbjct: 4 VTISDEHLTGIADRAISDADTDGDKLISFAELK 36
>SB_4639| Best HMM Match : Saccharop_dh (HMM E-Value=3e-06)
Length = 268
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/46 (21%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 31 DKNYRVYTDDQLEAVLEQALKHTDLNND-GYVDYSEYRFNDYKAKK 75
D+ YR Y + ++A +E H D++ + +++ + +++D +K
Sbjct: 82 DRQYRFYGEPVVKAAVENGCHHLDVSGEPEFLETMQLKYHDLAKQK 127
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 1 MVHYLAAQGHGFDSHIGQTFNNNN 24
M H L G DSH G+TFN N
Sbjct: 707 MPHQLFINGEFVDSHHGKTFNTIN 730
>SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26)
Length = 354
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 21 NNNNIFKRQVDKNYRVYTDDQLEAVLEQALKHTDLNNDGYVDYSEY 66
NNN+I +V + ++ D + +E L+ D + DG V + ++
Sbjct: 303 NNNSIGVEEVQRVLKLLGQDFKDYEVEAMLQGADYDGDGTVGFDDF 348
>SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14)
Length = 148
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 40 DQLEAVLEQALKHTDLNNDGYVDYSEY 66
D E+ +E ++ D N DG VD+ E+
Sbjct: 115 DPNESEIEHMMEAADTNEDGKVDFEEF 141
>SB_11953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 87 VVLYKDEDLSEI-VEGALKQADMNNDGYIEYAEFR 120
V L DED E V Q D NNDG + EFR
Sbjct: 160 VKLPDDEDTPEKRVNRIFAQMDTNNDGKLSMEEFR 194
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 26.2 bits (55), Expect = 7.8
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 54 DLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVHVVLYKDEDLSEIVEGALKQADMNNDGY 113
D N DG V + E++ KA + + D ED E K AD+N DG
Sbjct: 604 DDNKDGKVSWEEFK----KAHFTHTEGKEDDKATKEQMAED-----EAKFKYADVNGDGM 654
Query: 114 IEYAEFRT 121
++ E+ T
Sbjct: 655 LDLHEYVT 662
>SB_30673| Best HMM Match : efhand (HMM E-Value=0.00017)
Length = 256
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/87 (18%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 29 QVDKNYRVYTDDQLEAVLEQALKHTDLNNDGYVDYSEYRFNDYKAKKARQKSPDSDVHVV 88
++ K + + ++ L + D+N DG+V+ +E + K ++ + DV +
Sbjct: 15 EMAKEFENLSPEEARRRLRMLVPRIDINKDGFVEEAELEI--WIRHKMKKWEVEEDVDAI 72
Query: 89 LYKDEDLSEIVEGALKQADMNNDGYIE 115
++D D + K+ M G+ +
Sbjct: 73 -FRDMDFNNDNHATWKEFMMRTYGFTD 98
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.133 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,398,543
Number of Sequences: 59808
Number of extensions: 189986
Number of successful extensions: 545
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 477
Number of HSP's gapped (non-prelim): 91
length of query: 124
length of database: 16,821,457
effective HSP length: 74
effective length of query: 50
effective length of database: 12,395,665
effective search space: 619783250
effective search space used: 619783250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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