Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001744-TA|BGIBMGA001744-PA|IPR007087|Zinc finger,
C2H2-type
(663 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 50 7e-06
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 47 3e-05
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 44 3e-04
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 42 0.001
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 36 0.086
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 36 0.086
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 36 0.11
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 35 0.15
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 35 0.20
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 35 0.20
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 35 0.20
At3g24560.3 68416.m03086 expressed protein contains Pfam profil... 34 0.26
At3g24560.2 68416.m03084 expressed protein contains Pfam profil... 34 0.26
At3g24560.1 68416.m03085 expressed protein contains Pfam profil... 34 0.26
At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein ... 34 0.26
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 34 0.35
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 34 0.35
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 33 0.46
At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein ... 33 0.46
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 33 0.46
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 33 0.46
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 33 0.46
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 33 0.46
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 33 0.46
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 33 0.46
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 33 0.61
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 33 0.61
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 33 0.61
At1g08260.1 68414.m00911 DNA-directed DNA polymerase epsilon cat... 33 0.61
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 33 0.80
At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein ... 33 0.80
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 33 0.80
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 33 0.80
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 33 0.80
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 33 0.80
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 33 0.80
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 32 1.1
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 32 1.1
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 32 1.1
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 32 1.1
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 32 1.1
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 32 1.1
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 32 1.4
At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein ... 32 1.4
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 32 1.4
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 32 1.4
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 32 1.4
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 31 1.8
At5g51530.1 68418.m06390 ubiquitin carboxyl-terminal hydrolase-r... 31 1.8
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 31 1.8
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 31 1.8
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 31 2.4
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 31 2.4
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 31 2.4
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 31 3.2
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 31 3.2
At2g02960.5 68415.m00248 zinc finger (C3HC4-type RING finger) fa... 31 3.2
At2g02960.4 68415.m00247 zinc finger (C3HC4-type RING finger) fa... 31 3.2
At2g02960.3 68415.m00246 zinc finger (C3HC4-type RING finger) fa... 31 3.2
At2g02960.2 68415.m00245 zinc finger (C3HC4-type RING finger) fa... 31 3.2
At2g02960.1 68415.m00244 zinc finger (C3HC4-type RING finger) fa... 31 3.2
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 30 4.3
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 30 4.3
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 30 4.3
At3g46810.1 68416.m05081 DC1 domain-containing protein contains ... 30 4.3
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 30 4.3
At5g22355.1 68418.m02608 DC1 domain-containing protein contains ... 29 7.5
At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein ... 29 7.5
At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein ... 29 7.5
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 29 7.5
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 29 7.5
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 29 7.5
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 29 7.5
At5g46290.1 68418.m05698 3-oxoacyl-[acyl-carrier-protein] syntha... 29 9.9
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 29 9.9
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 29 9.9
At2g26670.1 68415.m03199 heme oxygenase 1 (HO1) (HY1) identical ... 29 9.9
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 29 9.9
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 29 9.9
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 29 9.9
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 29 9.9
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 49.6 bits (113), Expect = 7e-06
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 476 CMCEVCGRMFQSQALLNDHRWVHTGEKPFKC--EVCDKTFRMRQRLMTHRRVHSRDRASY 533
C E CG+ F++ L H+ VH E+PF+C + C TF+ + H R+H+ +R Y
Sbjct: 1240 CTHEGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGER-PY 1298
Query: 534 GCAL--CGKHFSSQSNRQRH 551
C + CG F S+ RH
Sbjct: 1299 ICKVDGCGLSFRFVSDYSRH 1318
Score = 43.2 bits (97), Expect = 6e-04
Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 28/126 (22%)
Query: 476 CMCEVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGC 535
C E C F+S+A L H+ E C K FR + L+ H+RVH +D + C
Sbjct: 1217 CYLEGCKMTFESKAKLQTHK-----RNRCTHEGCGKKFRAHKYLVLHQRVH-KDERPFEC 1270
Query: 536 AL--CGKHFSSQSNRQRHMFYRLRLVIGSRLITAVPGQIHTGLKPYKCEM--CGKGFKHT 591
+ C F Q R H+ ++HTG +PY C++ CG F+
Sbjct: 1271 SWKGCSMTFKWQWARTEHL------------------RLHTGERPYICKVDGCGLSFRFV 1312
Query: 592 SEKRAH 597
S+ H
Sbjct: 1313 SDYSRH 1318
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 47.2 bits (107), Expect = 3e-05
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 476 CMCEVCGRMFQSQALLNDHRWVHTGEKPFKC--EVCDKTFRMRQRLMTHRRVHSRDRASY 533
C + CG+ F S L H+ VH+ ++P KC + C TF+ H RVH+ R Y
Sbjct: 1262 CPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGAR-PY 1320
Query: 534 GCAL--CGKHFSSQSNRQRH 551
CA CG+ F S+ RH
Sbjct: 1321 VCAEPDCGQTFRFVSDFSRH 1340
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 476 CMCEVCGRMFQSQALLNDHRWVHTGEKPFKC--EVCDKTFRMRQRLMTHRRVHSRDRASY 533
C E CG+ F + L H +HTGE+ + C E C K F + L +H + HS++ +
Sbjct: 110 CDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQEN-YH 168
Query: 534 GCAL--CGKHFSSQSNRQRHM 552
C C K ++ + + H+
Sbjct: 169 ICPYSGCVKRYAHEYKLKNHV 189
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 42.3 bits (95), Expect = 0.001
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 478 CEVCGRMFQSQALLNDHRWVHTGEKPFKCEV--CDKTFRMRQRLMTHRRVHSRDRASYGC 535
C+ CG F+ A L H H+ E+ F C V C ++R + L H H
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPK 127
Query: 536 ALCGKHFSSQSNRQRHM 552
C FS Q N RH+
Sbjct: 128 ENCKSEFSVQGNVGRHV 144
Score = 38.3 bits (85), Expect = 0.016
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 254 DQCGDHQCLVCRIYFRNQHALRKHMTAHHSSR-FSCKQCPFVTNHRQTARL--HERWHCG 310
+ +H C C F+ L++HM +H R F+C ++R+ L H H G
Sbjct: 61 ESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG 120
Query: 311 TKYRCP--HCPEEFVKFTTYMGHLRIKHPSD 339
++CP +C EF H++ H +D
Sbjct: 121 KLFKCPKENCKSEFSVQGNVGRHVKKYHSND 151
Score = 35.5 bits (78), Expect = 0.11
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 440 CEQCGLQLDDPRAYHKHFRRMHPDKNRTNYPSMKTPCMCEVCGRMFQSQALLNDHRWVHT 499
C++CG + P +H + +++ T C + C ++ + LN H H
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFT--------CYVDDCAASYRRKDHLNRHLLTHK 119
Query: 500 GEKPFKC--EVCDKTFRMRQRLMTH-RRVHSRD 529
G K FKC E C F ++ + H ++ HS D
Sbjct: 120 G-KLFKCPKENCKSEFSVQGNVGRHVKKYHSND 151
Score = 33.9 bits (74), Expect = 0.35
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
Query: 478 CEVCGRMFQSQALLNDHRWVHTGEKP--FKCEV--CDKTFRMRQRLMTHRRVHSRDRASY 533
CE+CG + + R P KCEV C TF L H + D +
Sbjct: 277 CEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPF 336
Query: 534 GCAL--CGKHFSSQSNRQRH 551
C CG F+ + R +H
Sbjct: 337 VCGFPGCGMRFAYKHVRNKH 356
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 35.9 bits (79), Expect = 0.086
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 14/140 (10%)
Query: 232 CDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIY--FRNQHALRKHMTA--HHSSRFS 287
C C KGF+ HM H D+ + L+ + ++L+KH + H R++
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGYSLKKHYYSCPQHGCRWN 278
Query: 288 CKQCPF-VTNHRQTARLH-ERWHCGTKYRCPHCPEEFVKFTTYMGHLRI--KHPSD--FV 341
+ F A+ H +R HC Y C C VK + + LR KH D +V
Sbjct: 279 QRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCS---VKHFSVLSDLRTHEKHCGDIKWV 335
Query: 342 CELCGYCFVSAKGIMLHKQL 361
C CG F +M H L
Sbjct: 336 CS-CGTKFSRKDKLMSHVSL 354
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 35.9 bits (79), Expect = 0.086
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 492 NDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSR 528
++ RW K F+CE C+K F+ Q L HR H +
Sbjct: 148 DEERWKKKRNKWFECETCEKVFKSYQALGGHRASHKK 184
Score = 30.7 bits (66), Expect = 3.2
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 23/108 (21%)
Query: 197 LSDTLFTTTQLSVEEQVAEIHKRKEGSNYRNGVFKCDECFKGFQDADAYSSHMTRH---- 252
LS L + + EE+ ++ + K+ RN F+C+ C K F+ A H H
Sbjct: 130 LSLMLLSRDKWEKEEEESDEERWKKK---RNKWFECETCEKVFKSYQALGGHRASHKKKI 186
Query: 253 --TDQCGD--------------HQCLVCRIYFRNQHALRKHMTAHHSS 284
TDQ G H+C +C F + AL H +H S+
Sbjct: 187 AETDQLGSDELKKKKKKSTSSHHECPICAKVFTSGQALGGHKRSHASA 234
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 35.5 bits (78), Expect = 0.11
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 494 HRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRA 531
+ W + +P+ CE C++ F Q L H +H +DRA
Sbjct: 11 YSWSGSQARPYICEFCERGFSNAQALGGHMNIHRKDRA 48
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 35.1 bits (77), Expect = 0.15
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 312 KYRCPHCPEEFVKFTTYMGHLRIKHPSDFVCELCGYCFVSAKGIMLHKQLKHRLEDGKVP 371
K C +C EF + H + KH F C +C +A G+++H H+ KVP
Sbjct: 11 KVWCYYCDREFDDEKILVQHQKAKH---FKCHVCHKKLSTASGMVIHVLQVHKENVTKVP 67
Query: 372 EKGPYCEQCDVRFVSPDAYDRHMIVSAKHSTDTKRAANKAK 412
+ D+ H++ + + + A AK
Sbjct: 68 NAKDGRDSTDIEIYGMQGIPPHVLTAHYGEEEDEPPAKVAK 108
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 34.7 bits (76), Expect = 0.20
Identities = 22/94 (23%), Positives = 37/94 (39%)
Query: 502 KPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQRHMFYRLRLVIG 561
+ + C C + F+ Q L H VH RDRA + Q+ + L +G
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQATPPECDRQQQVLDVG 112
Query: 562 SRLITAVPGQIHTGLKPYKCEMCGKGFKHTSEKR 595
S+++ + G K ++C +S KR
Sbjct: 113 SKVLVQEETRKPNGTKREISDVCNNNVLESSMKR 146
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 34.7 bits (76), Expect = 0.20
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 466 RTNYPSMKTPCMCEVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTF-RMRQRLMTHRR 524
R+N S K+ C++CG+ F+ L H+ +H +P K ++ + F + R ++
Sbjct: 34 RSNLQS-KSSHKCKICGKSFECYQALGGHQRIH---RPIKEKLSKQEFSEVYPRKSKLQK 89
Query: 525 VHSRDRASYGCALCGKHF 542
+ Y C +CGK F
Sbjct: 90 RPESSSSCYECKVCGKIF 107
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 342 CELCGYCFVSAKGIMLHKQLKHRLEDGKVPEKGPYCE 378
C++CG FV ++G+ HK++ HR GK+ K Y E
Sbjct: 200 CKICGKSFVCSQGLGNHKRV-HREISGKLACKRKYTE 235
Score = 31.1 bits (67), Expect = 2.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVH 526
+KC +C+K+F Q L +H+R+H
Sbjct: 445 YKCSICEKSFVCSQALGSHQRLH 467
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 473 KTPCMCEVCGRMFQSQALLNDHRWVH 498
K+ C C++CG+ F L +H+ VH
Sbjct: 195 KSSCHCKICGKSFVCSQGLGNHKRVH 220
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 506 CEVCDKTFRMRQRLMTHRRVHSRDRASYGC 535
C++C K+F Q L H+RVH C
Sbjct: 200 CKICGKSFVCSQGLGNHKRVHREISGKLAC 229
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 34.7 bits (76), Expect = 0.20
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCAL---CGKHFSSQSNRQRHMFYRLRLVI 560
++C+ C++TF Q L HR H + R S + SS S ++ ++ V
Sbjct: 113 YECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFK---VS 169
Query: 561 GSRLITAVPGQIHTGLKPYKCEMCGKGF 588
GS L + I+ K ++C +CG F
Sbjct: 170 GSALASQASNIINKANKVHECSICGSEF 197
>At3g24560.3 68416.m03086 expressed protein contains Pfam profile
PF01171: PP-loop family
Length = 456
Score = 34.3 bits (75), Expect = 0.26
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 208 SVEEQVAEIHKRKEGSNYRNGVFKCDECFKGFQDADAYSSHMTRHTDQCGD----HQCLV 263
SV + E++ E + G+ + DE + + S + T+ H CL
Sbjct: 270 SVLSKARELNLLSESTYTTIGLLQRDETKRFLTKTEEKSVELEHGTNIAASSDKVHLCLG 329
Query: 264 CRIYFRNQHALRKHMTAHHSSRFSCKQCPFVT 295
+YF N+ +R +++ H + C+ CP T
Sbjct: 330 QNLYFMNRFLIRWNLSDHQCNEADCRNCPVST 361
>At3g24560.2 68416.m03084 expressed protein contains Pfam profile
PF01171: PP-loop family
Length = 660
Score = 34.3 bits (75), Expect = 0.26
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 208 SVEEQVAEIHKRKEGSNYRNGVFKCDECFKGFQDADAYSSHMTRHTDQCGD----HQCLV 263
SV + E++ E + G+ + DE + + S + T+ H CL
Sbjct: 474 SVLSKARELNLLSESTYTTIGLLQRDETKRFLTKTEEKSVELEHGTNIAASSDKVHLCLG 533
Query: 264 CRIYFRNQHALRKHMTAHHSSRFSCKQCPFVT 295
+YF N+ +R +++ H + C+ CP T
Sbjct: 534 QNLYFMNRFLIRWNLSDHQCNEADCRNCPVST 565
>At3g24560.1 68416.m03085 expressed protein contains Pfam profile
PF01171: PP-loop family
Length = 462
Score = 34.3 bits (75), Expect = 0.26
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 208 SVEEQVAEIHKRKEGSNYRNGVFKCDECFKGFQDADAYSSHMTRHTDQCGD----HQCLV 263
SV + E++ E + G+ + DE + + S + T+ H CL
Sbjct: 276 SVLSKARELNLLSESTYTTIGLLQRDETKRFLTKTEEKSVELEHGTNIAASSDKVHLCLG 335
Query: 264 CRIYFRNQHALRKHMTAHHSSRFSCKQCPFVT 295
+YF N+ +R +++ H + C+ CP T
Sbjct: 336 QNLYFMNRFLIRWNLSDHQCNEADCRNCPVST 367
>At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 257
Score = 34.3 bits (75), Expect = 0.26
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 193 MNAELSDTLFTT----TQLSVEEQVAEIHKRKEGSNYRNGVFKCDECFKGFQDADAYSSH 248
++AE SD TT + +++++ E K K+ N N F+C CF+ F + A H
Sbjct: 54 LSAEPSDHQTTTKNDESSENIKDKDKEKDKDKDKDNNNNRRFECHYCFRNFPTSQALGGH 113
Query: 249 MTRH 252
H
Sbjct: 114 QNAH 117
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 33.9 bits (74), Expect = 0.35
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 440 CEQCGL------QLDDPRAYHKHFRRMHPDKNR--TNYPSMKTPCMCEVCGRMFQSQALL 491
C+ CG L R HK+ R DKN + P ++ C++C RMF S L
Sbjct: 230 CDTCGKVLRSYQALGGHRTSHKYKRLKISDKNYFGEDGPIVRRQYECQICNRMFASGQAL 289
Query: 492 NDHRWVH 498
H+ +H
Sbjct: 290 GGHKKIH 296
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 33.9 bits (74), Expect = 0.35
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
Query: 478 CEVCGRMFQSQALLNDHRWVHTGEKP--FKCEV--CDKTFRMRQRLMTHRRVHSRDRASY 533
CE+CG + + R P KCEV C TF L H + D +
Sbjct: 189 CEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPF 248
Query: 534 GCAL--CGKHFSSQSNRQRH 551
C CG F+ + R +H
Sbjct: 249 VCGFPGCGMRFAYKHVRNKH 268
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 33.5 bits (73), Expect = 0.46
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 529 DRASYGCALCGKHFSSQSNRQRHMFYRLRLVIGSRLITAVPGQIHTGLKPYKCEMCGKGF 588
++ SY C +C K FSS H L G + P T +K + C +CGK F
Sbjct: 71 EKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPS---TAVKSHVCSVCGKSF 127
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 15/63 (23%)
Query: 497 VHTGEKP-FKCEVCDKTFRMRQRLMTHRRVH-------SRDRA-------SYGCALCGKH 541
V EKP +KC VC KTF Q L H+ H D++ S+ C++CGK
Sbjct: 67 VTVAEKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKS 126
Query: 542 FSS 544
F++
Sbjct: 127 FAT 129
Score = 30.7 bits (66), Expect = 3.2
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 492 NDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCAL-CGKHFSSQSNR 548
ND T K C VC K+F Q L H+R H S + H SS S+R
Sbjct: 106 NDKSTPSTAVKSHVCSVCGKSFATGQALGGHKRCHYDGGVSNSEGVGSTSHVSSSSHR 163
>At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 180
Score = 33.5 bits (73), Expect = 0.46
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 502 KPFKCEVCDKTFRMRQRLMTHRRVHSRDRAS 532
+ + C C + FR Q L H VH RDRAS
Sbjct: 38 RSYTCNFCRREFRSAQALGGHMNVHRRDRAS 68
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 33.5 bits (73), Expect = 0.46
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHSRDRAS 532
+KCE C K F+ Q L HR H ++R S
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNRVS 201
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 465 NRTNYPSMKTPCMCEVCGRMFQSQALLNDHRWVH 498
N+ N + K CE CG++F+S L HR H
Sbjct: 162 NKINRATTKGRYKCETCGKVFKSYQALGGHRASH 195
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 33.5 bits (73), Expect = 0.46
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSN 547
++C+ CD+TF Q L HR H + +A+ G L H +SN
Sbjct: 182 YQCKTCDRTFPSFQALGGHRASHKKPKAAMG--LHSNHDHKKSN 223
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 33.5 bits (73), Expect = 0.46
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHSRDRA 531
FKCE C K F+ Q L HR H +++A
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKKNKA 221
Score = 29.9 bits (64), Expect = 5.6
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 463 DKNRTNYPSMKTP--CMCEVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTFRMRQRLM 520
D + +Y S K+ CE CG++F+S L HR H K C KT +++
Sbjct: 179 DHDSEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNK--AC--MTKT----EQVE 230
Query: 521 THRRVHSRDRASYGCALCGKHFSS 544
T + +++ + C +C + F+S
Sbjct: 231 TEYVLGVKEKKVHECPICFRVFTS 254
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 33.5 bits (73), Expect = 0.46
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 476 CMCEVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDR 530
C+ + Q LN H HT + F+C+ C+K F Q L HR H + +
Sbjct: 20 CLMILAQTSMVKQIGLNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRASHKKPK 73
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 33.5 bits (73), Expect = 0.46
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 477 MCEVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCA 536
+C+ C + F S L H +HT E K + QR M ++ + + GC
Sbjct: 10 LCKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQRKMMAQK--HKQQQQVGCR 67
Query: 537 LCGKHFSSQSNRQRHM 552
CG+ F S + HM
Sbjct: 68 ECGRVFVSLKALRGHM 83
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 33.5 bits (73), Expect = 0.46
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS 527
F CEVC+K F+ Q L HRR H+
Sbjct: 82 FLCEVCNKGFQREQNLQLHRRGHN 105
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 505 KCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQRHM 552
KC C + F ++ L+ H R+ C +C KH S + + H+
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHL 54
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 231 KCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKHM 278
KC C++ F + HM + C +C + R+ +LR+H+
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHL 54
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 33.1 bits (72), Expect = 0.61
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQRHMFYRLRLV--IG 561
F CE+C+K F+ Q L HRR H + L K+ Q ++ ++
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGH-----NLPWKLKQKNTKEQQKKKVYVCPETNCAHHHP 136
Query: 562 SRLITAVPG-QIH----TGLKPYKCEMCGKGFKHTSEKRAH 597
SR + + G + H G K +KCE C K + S+ +AH
Sbjct: 137 SRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAH 177
Score = 29.9 bits (64), Expect = 5.6
Identities = 34/124 (27%), Positives = 46/124 (37%), Gaps = 16/124 (12%)
Query: 440 CEQC--GLQLDDPRAYHKHFRRMH---PDKNRTNYPSMKTPCMCEV-CGRMFQSQAL--- 490
CE C G Q D H+ + KN K E C S+AL
Sbjct: 84 CEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPETNCAHHHPSRALGDL 143
Query: 491 --LNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRV-HSRDRASYGCALCGKHFSSQSN 547
+ H GEK +KCE C K + ++ H ++ +RD Y C CG FS +
Sbjct: 144 TGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKICGTRD---YRCD-CGTLFSRKDT 199
Query: 548 RQRH 551
H
Sbjct: 200 FITH 203
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS 527
F CEVC+K F+ Q L HRR H+
Sbjct: 81 FICEVCNKGFQREQNLQLHRRGHN 104
Score = 29.1 bits (62), Expect = 9.9
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 8/130 (6%)
Query: 230 FKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKHMTAHHSSRFSCK 289
F C+ C KGFQ H H Q + R + + HH +
Sbjct: 81 FICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVK-RKVYLCPEPSCVHHDPSRALG 139
Query: 290 QCPFVTNHRQTARLHERWHCGTKYRCPHCPEEFVKFTTYMGHLRIKHPSDFVCELCGYCF 349
+ H + R H K++C C + + + + H + ++ C+ CG F
Sbjct: 140 DLTGIKKH------YYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTLF 192
Query: 350 VSAKGIMLHK 359
+ H+
Sbjct: 193 SRRDSFITHR 202
>At1g08260.1 68414.m00911 DNA-directed DNA polymerase epsilon
catalytic subunit, putative similar to SP|Q07864 DNA
polymerase epsilon, catalytic subunit A (EC 2.7.7.7) (DNA
polymerase II subunit A) {Homo sapiens}; contains Pfam
profiles: PF03175 DNA polymerase type B, organellar and
viral, PF00136 DNA polymerase family B, PF03104 DNA
polymerase family B, exonuclease domain
Length = 2271
Score = 33.1 bits (72), Expect = 0.61
Identities = 32/126 (25%), Positives = 47/126 (37%), Gaps = 15/126 (11%)
Query: 207 LSVEEQVAEIHKRKEGSNYRNGVFKCDECFKGFQDADAYSSH--MTRHTDQCGDHQCLVC 264
+ V+E AE G ++ C C ++D D +T C D QC
Sbjct: 2123 IKVKECAAEAEFLDPGPSFILPNVACSNC-DAYRDLDICRDPALLTEKEWSCADTQC--G 2179
Query: 265 RIYFRNQ------HALRKHMTAHHSSRFSCKQCPFVTNHRQTARLHERWHCGTKYRCPHC 318
+IY R Q +R+ +H C +C N + A L E+ C +RC
Sbjct: 2180 KIYDREQMESSLLEMVRQRERMYHMQDVVCIRC----NQVKAAHLTEQCECSGSFRCKES 2235
Query: 319 PEEFVK 324
EF K
Sbjct: 2236 GSEFSK 2241
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 32.7 bits (71), Expect = 0.80
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 499 TGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDR 530
T +K F C C +TF Q L H+ H R+R
Sbjct: 56 TEQKLFSCNYCQRTFYSSQALGGHQNAHKRER 87
>At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type domain, Prosite:PS00028
Length = 272
Score = 32.7 bits (71), Expect = 0.80
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 499 TGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDR 530
T +K F C C +TF Q L H+ H R+R
Sbjct: 99 TEQKLFSCNYCQRTFYSSQALGGHQNAHKRER 130
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 32.7 bits (71), Expect = 0.80
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS 527
F CEVC+K F+ Q L HRR H+
Sbjct: 68 FICEVCNKGFKRDQNLQLHRRGHN 91
Score = 30.3 bits (65), Expect = 4.3
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 14/141 (9%)
Query: 440 CEQC--GLQLDDPRAYHKHFRRMHPD-KNRTNYPSMKTP---CMCEVCGRMFQSQAL--- 490
CE C G + D H+ + K RTN +K C + C ++AL
Sbjct: 70 CEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVHHDPARALGDL 129
Query: 491 --LNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNR 548
+ H GEK +KC+ C K + + H ++ Y C CG FS + +
Sbjct: 130 TGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICG--TKEYRCD-CGTLFSRKDSF 186
Query: 549 QRHMFYRLRLVIGSRLITAVP 569
H + L S +VP
Sbjct: 187 ITHRAFCDALAEESARFVSVP 207
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 32.7 bits (71), Expect = 0.80
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 505 KCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQRHM 552
+C C K F R+ L+ H ++ C +C KH S + + H+
Sbjct: 18 RCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHL 65
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 231 KCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKHMTA-HHSSRFSCK 289
+C C+K F + HM +C VC + ++ ++R+H+ H S+ +CK
Sbjct: 18 RCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 32.7 bits (71), Expect = 0.80
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 505 KCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQRHM 552
+C C K F R+ L+ H ++ C +C KH S + + H+
Sbjct: 18 RCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHL 65
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 231 KCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKHMTA-HHSSRFSCK 289
+C C+K F + HM +C VC + ++ ++R+H+ H S+ +CK
Sbjct: 18 RCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 214
Score = 32.7 bits (71), Expect = 0.80
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 502 KPFKCEVCDKTFRMRQRLMTHRRVHSRDRA 531
K + C C + FR Q L H VH RDRA
Sbjct: 47 KNYTCSFCRREFRSAQALGGHMNVHRRDRA 76
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 258 DHQCLVCRIYFRNQHALRKHMTAHHSSRFSCKQCP 292
++ C CR FR+ AL HM H R +Q P
Sbjct: 48 NYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIP 82
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 32.7 bits (71), Expect = 0.80
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Query: 479 EVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRD 529
EVCG+ F + +H G F C +C KTF + H H +
Sbjct: 159 EVCGKRFW----IPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSE 205
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 559 VIGSRLITAVPGQIHTGLKPYKCEMCGKGFKHTSEKRAHI 598
V G R P QIH G + C +C K F + + H+
Sbjct: 160 VCGKRFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHM 199
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS 527
F CE+C+K F+ Q L HRR H+
Sbjct: 61 FVCEICNKGFQRDQNLQLHRRGHN 84
Score = 30.7 bits (66), Expect = 3.2
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 13/122 (10%)
Query: 440 CEQC--GLQLDDPRAYHKHFRRMHPD-KNRTNYPSMKTPCMCEVCGRMFQ--SQAL---- 490
CE C G Q D H+ + + R+ K +C V G + S+AL
Sbjct: 63 CEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALGDLT 122
Query: 491 -LNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQ 549
+ H GEK +KCE C K + ++ H ++ Y C CG FS + +
Sbjct: 123 GIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICG--TKEYKCD-CGTLFSRRDSFI 179
Query: 550 RH 551
H
Sbjct: 180 TH 181
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS 527
F CE+C+K F+ Q L HRR H+
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGHN 105
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 7/130 (5%)
Query: 230 FKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKHMTAHHSSRFSCK 289
F C+ C KGFQ H H Q + + + HH + +
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALG 141
Query: 290 QCPFVTNHRQTARLHERWHCGTKYRCPHCPEEFVKFTTYMGHLRIKHPSDFVCELCGYCF 349
+ H + R H K++C C +++ + + H + ++ C+ CG F
Sbjct: 142 DLTGIKKH------YSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCD-CGTLF 194
Query: 350 VSAKGIMLHK 359
+ H+
Sbjct: 195 SRKDSFITHR 204
Score = 29.1 bits (62), Expect = 9.9
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 14/123 (11%)
Query: 440 CEQC--GLQLDDPRAYHKHFRRMHPD-KNRTNYPSMKTP---CMCEVCGRMFQSQAL--- 490
CE C G Q D H+ + K R+ +K C + C S+AL
Sbjct: 84 CEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDL 143
Query: 491 --LNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNR 548
+ H GEK +KCE C K + ++ H + + Y C CG FS + +
Sbjct: 144 TGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAK--TCGTREYKCD-CGTLFSRKDSF 200
Query: 549 QRH 551
H
Sbjct: 201 ITH 203
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS 527
F CE+C+K F+ Q L HRR H+
Sbjct: 63 FVCEICNKGFQRDQNLQLHRRGHN 86
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 32.3 bits (70), Expect = 1.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 502 KPFKCEVCDKTFRMRQRLMTHRRVHSRDRA 531
+ + C C + FR Q L H VH RDRA
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRRDRA 74
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS 527
F CE+C+K F+ Q L HRR H+
Sbjct: 99 FVCEICNKGFQRDQNLQLHRRGHN 122
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 32.3 bits (70), Expect = 1.1
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 12/101 (11%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS-----RDRASYGCALCGKHFSSQSNRQRHMFYRLRL 558
F CEVC+K F+ Q L H+R H+ + R++ + + H R
Sbjct: 92 FICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSR--- 148
Query: 559 VIGSRLITAVPGQIHT--GLKPYKCEMCGKGFKHTSEKRAH 597
+G +T + G K +KCE C K + S+ +AH
Sbjct: 149 ALGD--LTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAH 187
Score = 30.3 bits (65), Expect = 4.3
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 14/123 (11%)
Query: 440 CEQC--GLQLDDPRAYHKHFRRMHPD-KNRTNYPSMKTP---CMCEVCGRMFQSQAL--- 490
CE C G Q D HK + K R+N ++ C C S+AL
Sbjct: 94 CEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRALGDL 153
Query: 491 --LNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNR 548
+ H + GEK +KCE C K + ++ H + + Y C CG FS + +
Sbjct: 154 TGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAK--TCGTKEYKCD-CGTLFSRRDSF 210
Query: 549 QRH 551
H
Sbjct: 211 ITH 213
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS 527
F CEVC K F+ Q L HRR H+
Sbjct: 66 FLCEVCGKGFQRDQNLQLHRRGHN 89
Score = 29.9 bits (64), Expect = 5.6
Identities = 29/130 (22%), Positives = 44/130 (33%), Gaps = 8/130 (6%)
Query: 230 FKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKHMTAHHSSRFSCK 289
F C+ C KGFQ H H Q + R K HHSSR +
Sbjct: 66 FLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSR-ALG 124
Query: 290 QCPFVTNHRQTARLHERWHCGTKYRCPHCPEEFVKFTTYMGHLRIKHPSDFVCELCGYCF 349
+ H R H K+ C C + + + + H + ++ C+ CG F
Sbjct: 125 DLTGIKKH------FCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCD-CGTIF 177
Query: 350 VSAKGIMLHK 359
+ H+
Sbjct: 178 SRRDSFITHR 187
Score = 29.9 bits (64), Expect = 5.6
Identities = 36/139 (25%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 440 CEQCG--LQLDDPRAYHKHFRRMHPD-KNRTNYPSMKTPCMC--EVCGRMFQSQAL---- 490
CE CG Q D H+ + K RT+ K +C + C S+AL
Sbjct: 68 CEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDLT 127
Query: 491 -LNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQ 549
+ H GEK + CE C K + ++ H + + Y C CG FS + +
Sbjct: 128 GIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSK--TCGTREYRCD-CGTIFSRRDSFI 184
Query: 550 RHMFYRLRLVIGSRLITAV 568
H + L + I AV
Sbjct: 185 THRAFCDALAEETAKINAV 203
>At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 191
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 501 EKPFKCEVCDKTFRMRQRLMTHRRVHSRDR 530
EK FKC C + F Q L H+ H R+R
Sbjct: 52 EKRFKCHYCFRNFPTSQALGGHQNAHKRER 81
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 478 CEVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCAL 537
C VCG+ F S L H+ H KP +V + + + + ++ C++
Sbjct: 96 CSVCGKSFPSYQALGGHKTSH--RKPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHNCSI 153
Query: 538 CGKHFSS 544
C K F S
Sbjct: 154 CFKSFPS 160
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS 527
F C+VC+K F+ Q L HRR H+
Sbjct: 83 FICDVCNKGFQREQNLQLHRRGHN 106
Score = 30.3 bits (65), Expect = 4.3
Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 8/130 (6%)
Query: 230 FKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKHMTAHHSSRFSCK 289
F CD C KGFQ H H Q + R + + HH +
Sbjct: 83 FICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVK-RKVYLCPEPTCVHHDPSRALG 141
Query: 290 QCPFVTNHRQTARLHERWHCGTKYRCPHCPEEFVKFTTYMGHLRIKHPSDFVCELCGYCF 349
+ H + R H K++C C + + + + H + ++ C+ CG F
Sbjct: 142 DLTGIKKH------YYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTIF 194
Query: 350 VSAKGIMLHK 359
+ H+
Sbjct: 195 SRRDSYITHR 204
Score = 29.9 bits (64), Expect = 5.6
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 491 LNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQR 550
+ H + GEK +KCE C K + ++ H + + Y C CG FS + +
Sbjct: 146 IKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSK--TCGTKEYRCD-CGTIFSRRDSYIT 202
Query: 551 H 551
H
Sbjct: 203 H 203
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 31.9 bits (69), Expect = 1.4
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS-----RDRASYGCALCGKHFSSQSNRQRHMFYRLRL 558
F CE+C K F+ Q L HRR H+ + R S +S H L
Sbjct: 70 FLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGD 129
Query: 559 VIGSRLITAVPGQIHTGLKPYKCEMCGKGFKHTSEKRAH 597
+ G + + H G K +KCE C K + S+ +AH
Sbjct: 130 LTGIKKHFC---RKH-GEKKWKCEKCAKRYAVQSDWKAH 164
Score = 29.1 bits (62), Expect = 9.9
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 13/122 (10%)
Query: 440 CEQCG--LQLDDPRAYHKHFRRMHPD-KNRTNYPSMKTPCMC--EVCGRMFQSQAL---- 490
CE CG Q D H+ + K RT+ K +C + C ++AL
Sbjct: 72 CEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLT 131
Query: 491 -LNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQ 549
+ H GEK +KCE C K + ++ H + + Y C CG FS + +
Sbjct: 132 GIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSK--TCGTREYRCD-CGTIFSRRDSFI 188
Query: 550 RH 551
H
Sbjct: 189 TH 190
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 31.5 bits (68), Expect = 1.8
Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 7/130 (5%)
Query: 230 FKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKHMTAHHSSRFSCK 289
F C+ C KGFQ H H Q + + + HH +
Sbjct: 6 FFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYICPEKSCVHHDPARALG 65
Query: 290 QCPFVTNHRQTARLHERWHCGTKYRCPHCPEEFVKFTTYMGHLRIKHPSDFVCELCGYCF 349
+ H R H K++C C +++ + + H +I +F C+ CG F
Sbjct: 66 DLTGIKKH------FSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSREFRCD-CGTLF 118
Query: 350 VSAKGIMLHK 359
+ H+
Sbjct: 119 SRKDSFISHR 128
Score = 31.5 bits (68), Expect = 1.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS 527
F CE+C+K F+ Q L H+R H+
Sbjct: 6 FFCEICNKGFQREQNLQLHKRGHN 29
>At5g51530.1 68418.m06390 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1149
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 80 RAAEKLTSNLTCDVTH---CDADPGLAAPSCRVYLQDDAELEPEETKYDVQGG-DVTADV 135
R + L++ L V H D +PG+ +PS ++ +D +EPE+T+ +G +++++
Sbjct: 727 RNSTSLSTPLDKTVEHEPSVDLEPGVTSPSLKIVKED--FMEPEDTRAGERGRLEISSNT 784
Query: 136 DTQE 139
D QE
Sbjct: 785 DNQE 788
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 31.5 bits (68), Expect = 1.8
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 16/106 (15%)
Query: 459 RMHPDKNRTNYPS--MKTPCMCEVCG---RMFQSQAL-LNDHRWVHT------GEKPFKC 506
R P+ R P+ ++ PC C G + +A L D R + T G KPF C
Sbjct: 205 RKGPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFAC 264
Query: 507 EVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQRHM 552
+C K F ++ TH + + + C+ CG F + + + H+
Sbjct: 265 RMCGKAFAVKGDWRTHEKNCGK---LWYCS-CGSDFKHKRSLKDHV 306
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 575 GLKPYKCEMCGKGFKHTSEKRAH 597
G KP+ C MCGK F + R H
Sbjct: 258 GSKPFACRMCGKAFAVKGDWRTH 280
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 31.5 bits (68), Expect = 1.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHSRD 529
+KC VCDKTF Q L H+ H ++
Sbjct: 80 YKCSVCDKTFSSYQALGGHKASHRKN 105
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 505 KCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQRHM 552
KC C + F + L+ H ++ C +C KH S + + H+
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREHL 63
Score = 29.9 bits (64), Expect = 5.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 231 KCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKHM 278
KC C++ F + HM + C VC+ + R+ +LR+H+
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREHL 63
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 502 KPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKH 541
+ + C++C + F Q L H +H R+R Y + H
Sbjct: 19 RTYDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSSH 58
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/58 (32%), Positives = 24/58 (41%)
Query: 479 EVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCA 536
E+ M LL+ T + F C+ C+K F Q L HR H R A G A
Sbjct: 9 EMINNMANCLILLSKAHQNDTKSRVFACKTCNKEFPSFQALGGHRASHRRSAALEGHA 66
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 30.7 bits (66), Expect = 3.2
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 16/106 (15%)
Query: 459 RMHPDKNRTNYPS--MKTPCMCEVCG---RMFQSQAL-LNDHRWVHT------GEKPFKC 506
R P+ R P+ ++ PC C G + +A L D R + T G KPF C
Sbjct: 244 RKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMC 303
Query: 507 EVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQRHM 552
C K F +R R H ++ +CG F + + + H+
Sbjct: 304 RKCGKAFAVR----GDWRTHEKNCGKLWYCICGSDFKHKRSLKDHI 345
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 575 GLKPYKCEMCGKGFKHTSEKRAH 597
G+KP+ C CGK F + R H
Sbjct: 297 GIKPFMCRKCGKAFAVRGDWRTH 319
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 502 KPFKCEVCDKTFRMRQRLMTHRRVHSRDRA 531
+ + C C + F+ Q L H VH RDRA
Sbjct: 37 RSYTCSFCRREFKSAQALGGHMNVHRRDRA 66
>At2g02960.5 68415.m00248 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 275
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 88 NLTCDVTHCDADPGLAAPSCRVYLQDDAELEPEETKYDVQGGDVTADVDTQE 139
N+ C++ H PG AP L+PEET D+ GG + +D +
Sbjct: 82 NIICEICHQPYQPGYTAPP--------PPLQPEETTIDIGGGWTISGLDVHD 125
>At2g02960.4 68415.m00247 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 88 NLTCDVTHCDADPGLAAPSCRVYLQDDAELEPEETKYDVQGGDVTADVDTQE 139
N+ C++ H PG AP L+PEET D+ GG + +D +
Sbjct: 82 NIICEICHQPYQPGYTAPP--------PPLQPEETTIDIGGGWTISGLDVHD 125
>At2g02960.3 68415.m00246 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 88 NLTCDVTHCDADPGLAAPSCRVYLQDDAELEPEETKYDVQGGDVTADVDTQE 139
N+ C++ H PG AP L+PEET D+ GG + +D +
Sbjct: 82 NIICEICHQPYQPGYTAPP--------PPLQPEETTIDIGGGWTISGLDVHD 125
>At2g02960.2 68415.m00245 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 88 NLTCDVTHCDADPGLAAPSCRVYLQDDAELEPEETKYDVQGGDVTADVDTQE 139
N+ C++ H PG AP L+PEET D+ GG + +D +
Sbjct: 82 NIICEICHQPYQPGYTAPP--------PPLQPEETTIDIGGGWTISGLDVHD 125
>At2g02960.1 68415.m00244 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 88 NLTCDVTHCDADPGLAAPSCRVYLQDDAELEPEETKYDVQGGDVTADVDTQE 139
N+ C++ H PG AP L+PEET D+ GG + +D +
Sbjct: 82 NIICEICHQPYQPGYTAPP--------PPLQPEETTIDIGGGWTISGLDVHD 125
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 30.3 bits (65), Expect = 4.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 579 YKCEMCGKGFKHTSEKRAHITYVHL 603
++CE CGKGF++ + H + +HL
Sbjct: 64 FRCEECGKGFRYEKYFKNHRSMMHL 88
Score = 29.9 bits (64), Expect = 5.6
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 218 KRKEGSNYRNGVFKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKH 277
K +E ++ + ++ + + + + +T+ + +H+C +C F + AL H
Sbjct: 317 KMREAGDFESRFYRIELGVGAMECTSSDTDMLTQSDKKNVEHRCRLCNKIFSSYQALGGH 376
Query: 278 MTAHHSSRFSCK 289
T H S+ CK
Sbjct: 377 QTFHRMSK--CK 386
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHSRDRAS 532
++C+ CD+TF Q L HR H + +A+
Sbjct: 153 YQCKTCDRTFPSFQALGGHRASHKKPKAA 181
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 30.3 bits (65), Expect = 4.3
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 12/87 (13%)
Query: 205 TQLSVEEQVAEIHKRKEGSNYRNGVFKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVC 264
T +S E + +R + Y E +K + D + H R C D CL
Sbjct: 215 THMSTEHYTCHLCQRSQPGQY--------EYYKNYDDLEI---HFRRDHFLCEDDSCLAK 263
Query: 265 RI-YFRNQHALRKHMTAHHSSRFSCKQ 290
+ F+N+ L++H H + S Q
Sbjct: 264 KFTVFQNESELKRHNAIEHGGKMSRSQ 290
>At3g46810.1 68416.m05081 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 686
Score = 30.3 bits (65), Expect = 4.3
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 15/100 (15%)
Query: 267 YFRNQHALRKHMTAHHSSRFSCKQCPFVTNHRQTARLHERWHCGTKYRCPHCPEEFVKFT 326
Y ++H L+ TA + +CK C ++ + +A +E C Y C E F FT
Sbjct: 120 YKVHEHPLKPFKTAWLAETGNCKGCNYIIGNGDSAPFYECRRC-KLYIHVTCLELF--FT 176
Query: 327 TYMGH-LRIKHP-----------SDFVCELCGYCFVSAKG 354
T H +KHP +D C LCG F +G
Sbjct: 177 TDARHNSHLKHPLKYLKNGPPSYADHKCLLCGREFEDQQG 216
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVH-------SRDRASYGCALCGKHFSSQSNRQRHMFYRL 556
+ CE+C++ F+ Q L HRR H RD+ + + L
Sbjct: 39 YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRKRVYVCPEPTCLHHDPCHAL 98
Query: 557 RLVIGSRLITAVPGQIHTGLKPYKCEMCGKGFKHTSEKRAHI 598
++G + +H K + CE C KG+ S+ +AH+
Sbjct: 99 GDLVGIKKHFRRKHSVH---KQWVCERCSKGYAVQSDYKAHL 137
>At5g22355.1 68418.m02608 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain; similar to ULI3 [Arabidopsis
thaliana] GI:17225050
Length = 664
Score = 29.5 bits (63), Expect = 7.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 461 HPDKNRTNYPSMKTPCMCEVCGRMF 485
HP + S++ PC C +CG+ F
Sbjct: 68 HPQHTLKLHNSLRNPCKCNLCGKTF 92
>At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 161
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHSRDRAS 532
F C+ C + F Q L H+ H R+RA+
Sbjct: 38 FPCQYCPRKFYTSQALGGHQNAHKRERAA 66
>At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 230
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 505 KCEVCDKTFRMRQRLMTHRRVH 526
+C++C K+F Q L HRR+H
Sbjct: 92 RCQICGKSFECYQALGGHRRLH 113
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 503 PFKCEVCDKTFRMRQRLMTHRRVH 526
P+KC VC+K F Q L H+ H
Sbjct: 105 PYKCNVCEKAFPSYQALGGHKASH 128
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 440 CEQCGLQLDDPRAYHKHFRRMHPDKNRTNYPSMKTPCMCEVCGRMFQSQALLNDH 494
C QCG + + +H + H + N+ ++ T +C C R F+ L +H
Sbjct: 215 CPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNV-TVDVCPRCSRGFRDPVDLVNH 268
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 500 GEKPFKCEVCDKTFRMRQRLMTHRRVHSRDR 530
GE+ ++C+ C + F Q L H+ H ++R
Sbjct: 69 GERKYECQYCCREFGNSQALGGHQNAHKKER 99
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHS 527
FKC +C+K F Q L H+ HS
Sbjct: 193 FKCSICEKVFTSYQALGGHKASHS 216
>At5g46290.1 68418.m05698 3-oxoacyl-[acyl-carrier-protein] synthase
I identical to Swiss-Prot:P52410
3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast
precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I)
(KAS I) [Arabidopsis thaliana]
Length = 473
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 82 AEKLTSNLTCDVTHCDADP---GLAAPSCRVYLQDDAELEPEETKY 124
AE L + CD H DP GL SC +DA + PEE Y
Sbjct: 316 AEYLGGAVNCDAHHM-TDPRADGLGVSSCIERCLEDAGVSPEEVNY 360
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHSR 528
+KC VCDK F Q L H+ H +
Sbjct: 89 YKCSVCDKAFSSYQALGGHKASHRK 113
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALC 538
++C+ CDK+F Q L HR H + + C
Sbjct: 118 YQCKTCDKSFHSFQALGGHRASHKKPKLGASVFKC 152
>At2g26670.1 68415.m03199 heme oxygenase 1 (HO1) (HY1) identical to
plastid heme oxygenase (HY1) [Arabidopsis thaliana]
GI:4877362, heme oxygenase 1 [Arabidopsis thaliana]
GI:4530591 GB:AF132475; annotation updated per Seth J.
Davis at University of Wisconsin-Madison
Length = 282
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 307 WHCGTKYRCPHCPEEFVKFTTYMGHLRIKHPSDFVCELCGYCFV-SAKGIMLHKQLKHRL 365
W Y P ++ Y+ L K P F+C F SA G M+ +++ R+
Sbjct: 162 WFKEQGYEIPEPTAPGKTYSQYLKELAEKDPQAFICHFYNIYFAHSAGGRMIGRKVAERI 221
Query: 366 EDGK 369
D K
Sbjct: 222 LDNK 225
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 217 HKRKEGSNYRNGVFKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFR 269
H R++ SN++ V C+ C KG+ Y +H+ T H C R++ R
Sbjct: 134 HFRRKHSNHKQWV--CERCSKGYAVQSDYKAHL--KTCGTRGHSCDCGRVFSR 182
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVH 526
+ CE+C++ F+ Q L HRR H
Sbjct: 70 YVCEICNQGFQRDQNLQMHRRRH 92
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 535 CALCGKHFSSQSNRQRHM-----FYRLRLVIGSRLITAVPGQIHTGLKPYKCEMCG 585
C +CGK F +N + HM Y+ + +VPG +K Y C G
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLG 301
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 535 CALCGKHFSSQSNRQRHM-----FYRLRLVIGSRLITAVPGQIHTGLKPYKCEMCG 585
C +CGK F +N + HM Y+ + +VPG +K Y C G
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLG 301
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.135 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,705,312
Number of Sequences: 28952
Number of extensions: 573702
Number of successful extensions: 1929
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1500
Number of HSP's gapped (non-prelim): 448
length of query: 663
length of database: 12,070,560
effective HSP length: 86
effective length of query: 577
effective length of database: 9,580,688
effective search space: 5528056976
effective search space used: 5528056976
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 62 (29.1 bits)
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