Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001738-TA|BGIBMGA001738-PA|IPR007087|Zinc finger,
C2H2-type
(411 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 56 3e-08
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 54 2e-07
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 51 1e-06
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 51 1e-06
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 51 1e-06
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 39 0.005
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 38 0.012
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 38 0.012
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 36 0.065
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 35 0.086
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 35 0.086
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 34 0.15
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 34 0.15
At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains ... 34 0.15
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 34 0.20
At5g22355.1 68418.m02608 DC1 domain-containing protein contains ... 33 0.26
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 33 0.26
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 33 0.35
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 33 0.35
At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein ... 33 0.46
At4g01920.1 68417.m00255 DC1 domain-containing protein similar t... 33 0.46
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 33 0.46
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 33 0.46
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 33 0.46
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 32 0.61
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 32 0.61
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 32 0.61
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 32 0.80
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 32 0.80
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 32 0.80
At1g67220.1 68414.m07651 zinc finger protein-related similar to ... 31 1.1
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 31 1.1
At5g54050.1 68418.m06722 DC1 domain-containing protein 31 1.4
At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein ... 31 1.4
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 31 1.4
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 31 1.9
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 31 1.9
At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein ... 31 1.9
At3g11950.1 68416.m01473 UbiA prenyltransferase family protein c... 31 1.9
At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein ... 31 1.9
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 31 1.9
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 30 2.4
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 30 2.4
At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein ... 30 3.2
At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein ... 30 3.2
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 30 3.2
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 29 4.3
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 29 4.3
At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein ... 29 4.3
At4g34350.1 68417.m04881 LytB family protein contains Pfam profi... 29 4.3
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 29 4.3
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 29 4.3
At2g29660.1 68415.m03605 zinc finger (C2H2 type) family protein ... 29 4.3
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 29 4.3
At5g59920.1 68418.m07514 DC1 domain-containing protein contains ... 29 5.7
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 29 5.7
At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein ... 29 5.7
At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein ... 29 5.7
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 29 5.7
At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit (... 29 7.5
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 29 7.5
At2g36840.1 68415.m04518 ACT domain-containing protein contains ... 29 7.5
At2g17600.1 68415.m02036 DC1 domain-containing protein contains ... 29 7.5
At2g02470.1 68415.m00186 PHD finger family protein contains Pfam... 29 7.5
At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein ... 28 9.9
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 28 9.9
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 28 9.9
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 28 9.9
At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ... 28 9.9
At3g05740.1 68416.m00644 DNA helicase (RECQI1) identical to DNA ... 28 9.9
At1g55700.1 68414.m06378 DC1 domain-containing protein contains ... 28 9.9
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 28 9.9
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 28 9.9
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 56.4 bits (130), Expect = 3e-08
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Query: 205 KPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHM 264
+P + F + + CG+ F D + H+ I + + C K+F L +H
Sbjct: 70 EPEPTTEILFLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHY 129
Query: 265 RMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHM 320
+HTG+R Y C Y C K+F+ L H++ H++ + C C K + LK H+
Sbjct: 130 LIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHV 189
Query: 321 RTH 323
+
Sbjct: 190 AAY 192
Score = 46.8 bits (106), Expect = 3e-05
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 11/157 (7%)
Query: 213 QFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNI--CHKRFTQQGGLMQHMRMHTGD 270
Q+ + E CG+ F D ++ H I H + + C C K F+ L HM+ H+ +
Sbjct: 107 QYVCDQEGCGKKFLDSSKLKRHYLI-HTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQE 165
Query: 271 RPYPCNY--CPKSFTQKSGLDQHLRI-HTKV---KPYRCVICSKTFCQSVHLKQHMRTHT 324
+ C Y C K + + L H+ H K + + ++ ++V + +
Sbjct: 166 NYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGETPKYTPPAEKVLRTVKTPATVCGPS 225
Query: 325 NVAPFQCGI--CEKRYKQSSHLNYHLKNHNPANLTEE 359
+ P+ C CEK Y L HLK +P +L EE
Sbjct: 226 SDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHLQEE 262
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 54.0 bits (124), Expect = 2e-07
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 210 DAVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTG 269
+ + N E C F E + + H + P + C K F L+QH R+H+
Sbjct: 1233 ECAAYQCNMEGCTMSFSSEKQLMLHKR----NICPIKG--CGKNFFSHKYLVQHQRVHSD 1286
Query: 270 DRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCV--ICSKTFCQSVHLKQHMR 321
DRP C + C +F +H+R+HT +PY C C +TF +H R
Sbjct: 1287 DRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKR 1342
Score = 48.0 bits (109), Expect = 1e-05
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 245 FECNI--CHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYR 302
++CN+ C F+ + LM H R P C K+F L QH R+H+ +P +
Sbjct: 1237 YQCNMEGCTMSFSSEKQLMLHKR-----NICPIKGCGKNFFSHKYLVQHQRVHSDDRPLK 1291
Query: 303 CVI--CSKTFCQSVHLKQHMRTHTNVAPFQCG--ICEKRYKQSSHLNYH 347
C C TF + +H+R HT P+ C C + ++ S + H
Sbjct: 1292 CPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRH 1340
Score = 36.7 bits (81), Expect = 0.028
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 273 YPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQ 330
Y CN C SF+ + L H R +K C K F +L QH R H++ P +
Sbjct: 1237 YQCNMEGCTMSFSSEKQLMLHKRNICPIKG-----CGKNFFSHKYLVQHQRVHSDDRPLK 1291
Query: 331 CGI--CEKRYKQSSHLNYHLKNHNPA 354
C C+ +K + H++ H A
Sbjct: 1292 CPWKGCKMTFKWAWSRTEHIRVHTGA 1317
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 51.2 bits (117), Expect = 1e-06
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 219 ETCGEGFHDENEYITHTAIGHVKLKPFECNI--CHKRFTQQGGLMQHMRMHTGDRPYPCN 276
E CG+ F + H + H +PFEC+ C F Q +H+R+HTG+RPY C
Sbjct: 1243 EGCGKKFRAHKYLVLHQRV-HKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICK 1301
Query: 277 Y--CPKSFTQKSGLDQHLR 293
C SF S +H R
Sbjct: 1302 VDGCGLSFRFVSDYSRHRR 1320
Score = 50.8 bits (116), Expect = 2e-06
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 181 CEYSLHHRDEHTKRRKGIRCQVCEKPMS--------VDAVQFPFNC--ETCGEGFHDENE 230
CE SL H + + +K I ++ + P + V P C E C F + +
Sbjct: 1172 CETSLKHTETSDEEKKPIAKRLKKTPKACSGSRQQEVPTTTHPNRCYLEGCKMTFESKAK 1231
Query: 231 YITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNY--CPKSFTQKSGL 288
TH K C K+F L+ H R+H +RP+ C++ C +F +
Sbjct: 1232 LQTH------KRNRCTHEGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWAR 1285
Query: 289 DQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMR 321
+HLR+HT +PY C + C +F +H R
Sbjct: 1286 TEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHRR 1320
Score = 38.3 bits (85), Expect = 0.009
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 278 CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQCGI 333
C K F L H R+H +P+ C CS TF +H+R HT P+ C +
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKV 1302
Score = 31.5 bits (68), Expect = 1.1
Identities = 30/124 (24%), Positives = 41/124 (33%), Gaps = 11/124 (8%)
Query: 232 ITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQH 291
+ HT + KP + G Q + T C +F K+ L H
Sbjct: 1176 LKHTETSDEEKKPIAKRLKKTPKACSGSRQQEVPTTTHPNRCYLEGCKMTFESKAKLQTH 1235
Query: 292 LRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYH 347
R RC C K F +L H R H + PF+C C +K H
Sbjct: 1236 KR-------NRCTHEGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEH 1288
Query: 348 LKNH 351
L+ H
Sbjct: 1289 LRLH 1292
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 51.2 bits (117), Expect = 1e-06
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 221 CGEGFHDENEYITHTAIGHVKLKPFE--CNI--CHKRFTQQGGLMQHMRMHTGDRPYPCN 276
CG+ F ++ H HVKL E C+ C K FT + L H+R + + C
Sbjct: 222 CGKAFKYPSQLQKHQD-SHVKLDSVEAFCSEPGCMKYFTNEECLKSHIR--SCHQHINCE 278
Query: 277 YCPKSFTQKSGLDQHLRIHTKVKP---YRCVI--CSKTFCQSVHLKQHMR-THTNVAPFQ 330
C +K+ + +HLR H + +C + CS TF ++ +L++HM+ H ++ PF
Sbjct: 279 ICGSKHLKKN-IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFV 337
Query: 331 CGI--CEKRYKQSSHLNYH 347
CG C R+ N H
Sbjct: 338 CGFPGCGMRFAYKHVRNKH 356
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 301 YRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKNH 351
+ C C F + HLKQHM++H+ F C + C Y++ HLN HL H
Sbjct: 66 HTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTH 118
Score = 42.3 bits (95), Expect = 6e-04
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 247 CNICHKRFTQQGGLMQHMRMHTGDRPYPC--NYCPKSFTQKSGLDQHLRIHTKVKPYRC- 303
C C F + L QHM+ H+ +R + C + C S+ +K L++HL H K K ++C
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTH-KGKLFKCP 126
Query: 304 -VICSKTFCQSVHLKQHMRT-HTN 325
C F ++ +H++ H+N
Sbjct: 127 KENCKSEFSVQGNVGRHVKKYHSN 150
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 273 YPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQ 330
+ C C F + + L QH++ H+ + + C + C+ ++ + HL +H+ TH F+
Sbjct: 66 HTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKGKL-FK 124
Query: 331 C--GICEKRYKQSSHLNYHLKNHN 352
C C+ + ++ H+K ++
Sbjct: 125 CPKENCKSEFSVQGNVGRHVKKYH 148
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 51.2 bits (117), Expect = 1e-06
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 221 CGEGFHDENEYITHTAIGHVKLKPFE--CNI--CHKRFTQQGGLMQHMRMHTGDRPYPCN 276
CG+ F ++ H HVKL E C+ C K FT + L H+R + + C
Sbjct: 134 CGKAFKYPSQLQKHQD-SHVKLDSVEAFCSEPGCMKYFTNEECLKSHIR--SCHQHINCE 190
Query: 277 YCPKSFTQKSGLDQHLRIHTKVKP---YRCVI--CSKTFCQSVHLKQHMR-THTNVAPFQ 330
C +K+ + +HLR H + +C + CS TF ++ +L++HM+ H ++ PF
Sbjct: 191 ICGSKHLKKN-IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFV 249
Query: 331 CGI--CEKRYKQSSHLNYH 347
CG C R+ N H
Sbjct: 250 CGFPGCGMRFAYKHVRNKH 268
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 39.1 bits (87), Expect = 0.005
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 304 VICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKNHNPANLTEEQR 361
++ + + + L QH +HT+ F+C C KR+ L H +H LT EQ+
Sbjct: 23 ILAQTSMVKQIGLNQHTESHTS-NQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQK 79
Score = 33.5 bits (73), Expect = 0.26
Identities = 24/103 (23%), Positives = 38/103 (36%), Gaps = 10/103 (9%)
Query: 256 QQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVH 315
+Q GL QH HT ++ + C C K F+ L H H K K +
Sbjct: 31 KQIGLNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRASHKK---------PKLTVEQKD 80
Query: 316 LKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKNHNPANLTE 358
+K + +C IC + + L H++ H + E
Sbjct: 81 VKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSMTVE 123
Score = 33.1 bits (72), Expect = 0.35
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPY-RC 303
FEC C+KRF+ L H H PK ++ + +HL K + +C
Sbjct: 47 FECKTCNKRFSSFQALGGHRASHKK---------PKLTVEQKDV-KHLSNDYKGNHFHKC 96
Query: 304 VICSKTFCQSVHLKQHMRTH 323
ICS++F L HMR H
Sbjct: 97 SICSQSFGTGQALGGHMRRH 116
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 37.9 bits (84), Expect = 0.012
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 301 YRCVICSKTFCQSVHLKQHMR-THTNVAPFQCGICEKRYKQSSHLNYHL 348
+RCV C K F + HL +HM+ ++ ++ +CG+C K K + HL
Sbjct: 17 HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHL 65
Score = 30.7 bits (66), Expect = 1.9
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 247 CNICHKRFTQQGGLMQHMRM--HTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYR-- 302
C C+K F ++ L++HM++ H+ +P C C K + +HL + +
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQP-RCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
Query: 303 -------CVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 349
C +C + F ++ L +H P G +R SS LK
Sbjct: 78 AIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRNPSSSLAGSRLK 131
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 37.9 bits (84), Expect = 0.012
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 301 YRCVICSKTFCQSVHLKQHMR-THTNVAPFQCGICEKRYKQSSHLNYHL 348
+RCV C K F + HL +HM+ ++ ++ +CG+C K K + HL
Sbjct: 17 HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHL 65
Score = 30.7 bits (66), Expect = 1.9
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 247 CNICHKRFTQQGGLMQHMRM--HTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYR-- 302
C C+K F ++ L++HM++ H+ +P C C K + +HL + +
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQP-RCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
Query: 303 -------CVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 349
C +C + F ++ L +H P G +R SS LK
Sbjct: 78 AIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRNPSSSLAGSRLK 131
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 35.5 bits (78), Expect = 0.065
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 218 CETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHM 264
C C F DE + H K K F+C++CHK+ + G++ H+
Sbjct: 14 CYYCDREFDDEKILVQHQ-----KAKHFKCHVCHKKLSTASGMVIHV 55
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 303 CVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKNHNPANLTEEQRA 362
C C + F L QH + F+C +C K+ +S + H+ + N+T+ A
Sbjct: 14 CYYCDREFDDEKILVQHQKAKH----FKCHVCHKKLSTASGMVIHVLQVHKENVTKVPNA 69
Query: 363 K 363
K
Sbjct: 70 K 70
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 35.1 bits (77), Expect = 0.086
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYR 302
K ++C++C K F L H H N + T + L + K +
Sbjct: 92 KDYKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGL-VGQSGKTHN 150
Query: 303 CVICSKTFCQSVHLKQHMRTH 323
C IC K+F L H R H
Sbjct: 151 CSICFKSFPSGQALGGHKRCH 171
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 35.1 bits (77), Expect = 0.086
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 241 KLKPFECNICHKRFTQQGGLMQHMRMHTGDRP--YPCNYCPKSFTQKSGLDQHLRIHTKV 298
K F C C+K F L H+R+HT + Y N + Q+ + Q H +
Sbjct: 5 KENSFLCKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQRKMMAQK---HKQQ 61
Query: 299 KPYRCVICSKTFCQSVHLKQHMRTHTNV 326
+ C C + F L+ HM H V
Sbjct: 62 QQVGCRECGRVFVSLKALRGHMACHGEV 89
Score = 29.5 bits (63), Expect = 4.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 281 SFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQ 340
S+ S D + +IH + K + + K + V K H +C IC + +K
Sbjct: 277 SYETDSCADTNSKIHHRFKDSKSSMVKKEGGEKVKSKGH----------ECPICFRMFKS 326
Query: 341 SSHLNYHLKNHNPANLTEEQR 361
L H ++H+ AN E R
Sbjct: 327 GQALGGHKRSHSIANHAAEMR 347
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 34.3 bits (75), Expect = 0.15
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 302 RCVICSKTFCQSVHLKQHMR-THTNVAPFQCGICEKRYKQSSHLNYHL 348
+C C + F + HL +HMR ++ +V CGIC K + L HL
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHL 54
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 246 ECNICHKRFTQQGGLMQHMRM--HTGDRPYPCNYCPKSFTQKSGLDQHL 292
+C C+++F ++ L++HMR+ H+ P C C K L +HL
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEP-TCGICNKHCRSFDSLREHL 54
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 34.3 bits (75), Expect = 0.15
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 302 RCVICSKTFCQSVHLKQHMRT--HTNVAPFQCGICEKRYKQSSHLNYHL 348
+C C + F + HL +HM+ H+ P CG+C+K + L HL
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEP-TCGVCKKHCRSFESLREHL 63
Score = 32.7 bits (71), Expect = 0.46
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 246 ECNICHKRFTQQGGLMQHMRM--HTGDRPYPCNYCPKSFTQKSGLDQHL 292
+C C+++F + L++HM++ H+G P C C K L +HL
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEP-TCGVCKKHCRSFESLREHL 63
>At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains
Pfam PF02176: TRAF-type zinc finger; similar to TNF
receptor associated factor 4 (GI:7274404) [Mus musculus]
(GI:7274404); similar to Cysteine rich motif Associated
to Ring and Traf domains protein (mCART1)(GI:1041446)
[Mus musculus]
Length = 192
Score = 34.3 bits (75), Expect = 0.15
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 264 MRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH-MRT 322
M TG+ CN+C + + +D H R+H +C IC + H ++H + T
Sbjct: 1 METATGEITIVCNHCDRDIPSLN-IDLH-RVHCARNLEKCKICGDMVPKK-HAEEHYLNT 57
Query: 323 HTNVAPFQCGICEK 336
H AP C +C++
Sbjct: 58 H---APIACSMCKE 68
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 33.9 bits (74), Expect = 0.20
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 225 FHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQ 284
FH +++ +T K P++CN+C K F L H H P + T
Sbjct: 88 FHQQSQSLTPPP--ESKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTA 145
Query: 285 KS----GLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTH 323
+ ++H I K + C IC K F L H R H
Sbjct: 146 PTISIVAGEKH-PIAASGKIHECSICHKVFPTGQALGGHKRCH 187
>At5g22355.1 68418.m02608 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain; similar to ULI3 [Arabidopsis
thaliana] GI:17225050
Length = 664
Score = 33.5 bits (73), Expect = 0.26
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 169 GDGLCHQIFFSCCEYSLHHRDEHTKRRKGIRCQVCEKPMSVDAVQFPFNCETCGEGFHDE 228
GD L FS E++L ++ R +G RC+ C P+ D + +NCE C H++
Sbjct: 369 GDNLIKH--FSHEEHNLRLNKDNINRDEGSRCEACVLPIYSDPI---YNCEECRFILHEK 423
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 33.5 bits (73), Expect = 0.26
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 5 ERFVNVVPYSKIKQEIIVNDEDDVVNCRLCGKGFVSQIALTNH 47
+RFV+ +KQ+ ++ CR CGKGFVS AL H
Sbjct: 69 KRFVDHRQIMALKQQQQQQQLQELRRCRECGKGFVSSKALCGH 111
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 33.1 bits (72), Expect = 0.35
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 242 LKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPC--NYC--PKSFTQKSGLDQHLRIHTK 297
++ FEC C K F L H H + N P + + SG D +I T
Sbjct: 159 IERFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHDHQGKILTF 218
Query: 298 VKPYRCVICSKTFCQSVHLKQHMRTH 323
++C IC + F L HMR H
Sbjct: 219 SGHHKCNICFRVFSSGQALGGHMRCH 244
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 33.1 bits (72), Expect = 0.35
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 260 LMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH 319
L H + G RP+ C C K+F K H + K+ + C C F LK H
Sbjct: 327 LQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKL--WYC-SCGSDFKHKRSLKDH 383
Query: 320 MRTHTNVAPFQCGICEKRYKQSS 342
++ N CGI + + +S
Sbjct: 384 VKAFGNGHVPCCGIDHEEEEAAS 406
>At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 271
Score = 32.7 bits (71), Expect = 0.46
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 262 QHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRI-HTKVKPYRCVICSKTFCQSVH 315
+H ++H + C YC KSF + LD+H H + C C ++H
Sbjct: 94 EHHKVHVDVFEWKCGYCKKSFNDEKFLDKHFSTRHYNLLNTTDTKCLADLCGALH 148
Score = 32.3 bits (70), Expect = 0.61
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 317 KQHMRTHTNVAPFQCGICEKRYKQSSHLNYHL--KNHNPANLTE 358
++H + H +V ++CG C+K + L+ H +++N N T+
Sbjct: 93 QEHHKVHVDVFEWKCGYCKKSFNDEKFLDKHFSTRHYNLLNTTD 136
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 290 QHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRT-HTNVAPFQCGICEKRYKQSSHLNYHL 348
+H ++H V ++C C K+F L +H T H N+ C + H ++ L
Sbjct: 94 EHHKVHVDVFEWKCGYCKKSFNDEKFLDKHFSTRHYNLLNTTDTKCLADLCGALHCDFVL 153
Query: 349 KNHNP 353
+ P
Sbjct: 154 SSKKP 158
>At4g01920.1 68417.m00255 DC1 domain-containing protein similar to
A. thaliana CHP-rich proteins
Length = 658
Score = 32.7 bits (71), Expect = 0.46
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 186 HHRDEHTKRRKGIRCQVCEKPMSVDAVQFPFNCETCGEGFH 226
HHR T +K I+ +C K + +FP+NC C FH
Sbjct: 124 HHR--LTLLKKWIKQCICAKCCKIIGNEFPYNCHECDLSFH 162
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 32.7 bits (71), Expect = 0.46
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTK 297
RPY C +C + F+ L H+ IH K
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRK 45
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTGDR 271
+P+ C C + F+ L HM +H DR
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKDR 47
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 32.7 bits (71), Expect = 0.46
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 260 LMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH 319
L H + G +P+ C C K+F K H + K+ + C C F LK H
Sbjct: 249 LQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKL--WYC-SCGSDFKHKRSLKDH 305
Query: 320 MRTHTNVAPFQCGI 333
++ N CGI
Sbjct: 306 VKAFGN-GHVPCGI 318
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLR 293
KPF C +C K F +G H + + G Y C+ C F K L H++
Sbjct: 260 KPFACRMCGKAFAVKGDWRTHEK-NCGKLWY-CS-CGSDFKHKRSLKDHVK 307
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 32.7 bits (71), Expect = 0.46
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 260 LMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH 319
L H + G +P+ C C K K H + K + CV C F LK H
Sbjct: 216 LQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEK--NCGKRWVCV-CGSDFKHKRSLKDH 272
Query: 320 MRTH-TNVAPFQCGICEKRYKQSS 342
++ + P+ G+ E++ SS
Sbjct: 273 VKAFGSGHGPYPTGLFEEQASNSS 296
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLR 293
KPF C +C K +G H + + G R + C C F K L H++
Sbjct: 227 KPFSCRLCGKLLAVKGDWRTHEK-NCGKR-WVC-VCGSDFKHKRSLKDHVK 274
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 32.3 bits (70), Expect = 0.61
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 12/107 (11%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCV 304
F C++C+K F ++ L H R H P QKS + +++ +P CV
Sbjct: 83 FICDVCNKGFQREQNLQLHRRGHN---------LPWKLKQKSTKEVKRKVYLCPEP-TCV 132
Query: 305 --ICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 349
S+ +K+H ++C C KRY S H K
Sbjct: 133 HHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSK 179
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 32.3 bits (70), Expect = 0.61
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 12/107 (11%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCV 304
F C +C+K F ++ L H R H P QKS + +++ +P CV
Sbjct: 81 FICEVCNKGFQREQNLQLHRRGHN---------LPWKLKQKSTKEVKRKVYLCPEP-SCV 130
Query: 305 --ICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 349
S+ +K+H ++C C KRY S H K
Sbjct: 131 HHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSK 177
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 32.3 bits (70), Expect = 0.61
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 12/107 (11%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCV 304
F C +C+K F ++ L H R H P QKS + +++ +P CV
Sbjct: 82 FLCEVCNKGFQREQNLQLHRRGHN---------LPWKLKQKSNKEVRRKVYLCPEP-SCV 131
Query: 305 --ICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 349
++ +K+H ++C C KRY S H K
Sbjct: 132 HHDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSK 178
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 31.9 bits (69), Expect = 0.80
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 246 ECNICHKRFTQQGGLMQHMRMHTGD------RPYPCNYCPKSFTQKSGLDQHLRIHTK 297
EC + + G ++H R + R Y C +C + FT L H+ IH +
Sbjct: 2 ECERSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRR 59
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Query: 218 CETCGEGFHDENEYITH-----TAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDR 271
CE E + H +++ V + +EC C + FT L HM +H DR
Sbjct: 3 CERSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDR 61
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 31.9 bits (69), Expect = 0.80
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 17/99 (17%)
Query: 247 CNICHKRFTQQGGLMQHMRMHTGD--RPYPCNYCPKSFTQKSG--LDQHL---------- 292
C IC K F + L HMR H GD + P S +K G L +H
Sbjct: 219 CQICGKGFKRDANLRMHMRAH-GDEYKTREALISPTSQDKKGGYSLKKHYYSCPQHGCRW 277
Query: 293 -RIHTKVKPYRCVICSKTFCQSVHL-KQHMRTHTNVAPF 329
+ H K +P + VIC+K + H K +M +V F
Sbjct: 278 NQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHF 316
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 31 CRLCGKGFVSQIALTNHARMEHIDSYATGDPSI 63
C++CGKGF L H R H D Y T + I
Sbjct: 219 CQICGKGFKRDANLRMHMR-AHGDEYKTREALI 250
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 31.9 bits (69), Expect = 0.80
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 273 YPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHM--RTHTNVAPFQ 330
+ C C KSF L H RIH +P + + + F + K + R ++ + ++
Sbjct: 43 HKCKICGKSFECYQALGGHQRIH---RPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYE 99
Query: 331 CGICEKRYKQSSHLNYHLKNH 351
C +C K + L H K H
Sbjct: 100 CKVCGKIFGCYRGLGGHTKLH 120
Score = 29.9 bits (64), Expect = 3.2
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 246 ECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQ----KSGLDQHLRIHTKVKPY 301
+C IC K F L H R+H RP + F++ KS L + R + Y
Sbjct: 44 KCKICGKSFECYQALGGHQRIH---RPIKEKLSKQEFSEVYPRKSKLQK--RPESSSSCY 98
Query: 302 RCVICSKTF-CQ---SVHLKQHMRTHTNVAPFQ 330
C +C K F C H K H T +A Q
Sbjct: 99 ECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQ 131
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 30 NCRLCGKGFVSQIALTNHARM 50
+C++CGK FV L NH R+
Sbjct: 199 HCKICGKSFVCSQGLGNHKRV 219
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 275 CNYCPKSFTQKSGLDQHLRIHTKV 298
C C KSF GL H R+H ++
Sbjct: 200 CKICGKSFVCSQGLGNHKRVHREI 223
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 237 IGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGD 270
+G + + C C ++F G+ H RMH+G+
Sbjct: 316 VGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGN 349
>At1g67220.1 68414.m07651 zinc finger protein-related similar to
SP|Q09472 E1A-associated protein p300 {Homo sapiens},
SP|Q92793 CREB-binding protein {Homo sapiens}; contains
Pfam profiles PF00569: Zinc finger ZZ type, PF00628:
PHD-finger, PF02135: TAZ zinc finger
Length = 1357
Score = 31.5 bits (68), Expect = 1.1
Identities = 30/128 (23%), Positives = 43/128 (33%), Gaps = 13/128 (10%)
Query: 200 CQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKR------ 253
CQ+C+ + Q P C C D + Y T + C+ CH R
Sbjct: 645 CQLCDDGTLLFPPQ-PLYCLLCSRRIDDRSFYYTPGEEELSNAQHQICSPCHSRCKTKFP 703
Query: 254 ----FTQQGGLMQHMRMHTGDRP--YPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICS 307
F + +++ D C C K Q GL L+ K Y C C
Sbjct: 704 LCGVFIDKHKMLKRSNFDNADTEEWVQCESCEKWQHQICGLYNKLKDEDKTAEYICPTCL 763
Query: 308 KTFCQSVH 315
CQS++
Sbjct: 764 LEECQSIN 771
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
Query: 182 EYSLHHRDEHTKRR---KGIRCQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIG 238
+ + H+ + KR G+ + M D + E CG+ F +I A
Sbjct: 119 DITFDHQKKPIKREIIEDGVVMMKKRRKMKFDEEIIDSDVEVCGKRF-----WIPSPAQI 173
Query: 239 HVKLKPFECNICHKRFTQQGGLMQHMRMH 267
HV F C+IC K F + + HM H
Sbjct: 174 HVGPMQFACSICSKTFNRYNNMQMHMWGH 202
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 260 LMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH 319
L H + G +P+ C C K+ K H + K+ + C C F LK H
Sbjct: 252 LQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKL--WYCT-CGSDFKHKRSLKDH 308
Query: 320 MRT 322
+R+
Sbjct: 309 IRS 311
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 246 ECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIH 295
+ +C KRF + ++H G + C+ C K+F + + + H+ H
Sbjct: 157 DVEVCGKRFW----IPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGH 202
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 293 RIHTKVKPYRCVICSKTFCQSVHLKQHMRTH 323
+IH + C ICSKTF + +++ HM H
Sbjct: 172 QIHVGPMQFACSICSKTFNRYNNMQMHMWGH 202
>At5g54050.1 68418.m06722 DC1 domain-containing protein
Length = 580
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Query: 155 FECLQPSTCQQLTGGDGLCHQIFFSCCEYSLHHRDEHTKRRKGIRCQVCEKPMSVDAVQF 214
+ECL C+ D C + + LH + + RCQ C K + D
Sbjct: 391 YECLHED-CENKNAYDVRCSSVS-EPFHHDLHQHPLYFTLQSSRRCQACNKEIKDD---- 444
Query: 215 PFNCETCGE 223
P NC C E
Sbjct: 445 PLNCTVCDE 453
>At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein
weak similarity to S-locus protein 4 (GI:6069478)
[Brassica rapa]; weak similarity to Pre-mRNA cleavage
complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913)
[Homo sapiens]; contains Prosite PS00028: Zinc finger,
C2H2 type, domain
Length = 828
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 270 DRPYPCNYCPKSFTQKSGLDQHLRIHTKVK 299
D P+ C C QK LD+H+ +H K K
Sbjct: 676 DLPHLCTSCSVRLKQKEELDRHMELHDKKK 705
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 31.1 bits (67), Expect = 1.4
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 247 CNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVIC 306
C IC++ F + L H R H P+ K + + ++ R++ +P C+
Sbjct: 69 CEICNQGFQRDQNLQMHRRRHKV--PW------KLLKRDNNIEVKKRVYVCPEP-TCLHH 119
Query: 307 SKTFCQS--VHLKQHMRT-HTNVAPFQCGICEKRYKQSSHLNYHLK 349
+ V +K+H R H+N + C C K Y S HLK
Sbjct: 120 NPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLK 165
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/39 (41%), Positives = 16/39 (41%)
Query: 241 KLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCP 279
K K EC IC FT L HMR H G P P
Sbjct: 225 KNKVHECGICGAEFTSGQALGGHMRRHRGAVVVPAVIAP 263
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 30.7 bits (66), Expect = 1.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 297 KVKPYRCVICSKTFCQSVHLKQHMRTH 323
K++ +C CS+ FC V+ ++H R H
Sbjct: 57 KIQMQKCEKCSREFCSPVNFRRHNRMH 83
>At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 30.7 bits (66), Expect = 1.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 301 YRCVICSKTFCQSVHLKQHMRTH 323
++C +CSK+FC L HM++H
Sbjct: 5 HKCKLCSKSFCNGRALGGHMKSH 27
>At3g11950.1 68416.m01473 UbiA prenyltransferase family protein
contains Pfam profile PF01040: UbiA prenyltransferase
family
Length = 954
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 301 YRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQS 341
YR + C C +V M H +V PF+ CE+ +S
Sbjct: 190 YRTMNCENEGCTAVFCANQMENHDSVCPFKIIPCEQNCSES 230
Score = 29.5 bits (63), Expect = 4.3
Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 6/121 (4%)
Query: 214 FPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPY 273
F E G D E I T + +V K C +F +G L +H M+ G R
Sbjct: 137 FAQEMEISGFWLTDHREGIAQTLLKNVDFK--SSAHCEMKFQTEGELAEHA-MNCGYRTM 193
Query: 274 PCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI 333
C + T +Q + H V P++ + C + +S+ + R V P +
Sbjct: 194 NCEN--EGCTAVFCANQ-MENHDSVCPFKIIPCEQNCSESIMRRDMDRHCITVCPMKLVN 250
Query: 334 C 334
C
Sbjct: 251 C 251
>At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 353
Score = 30.7 bits (66), Expect = 1.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 28 VVNCRLCGKGFVSQIALTNHARMEH 52
++ C+ CGKGF+ + L NH ++ H
Sbjct: 77 LIRCKECGKGFLYEKCLFNHLQVTH 101
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/79 (22%), Positives = 29/79 (36%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCV 304
++C++C K F+ L H H + + + S K + C
Sbjct: 80 YKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHVCT 139
Query: 305 ICSKTFCQSVHLKQHMRTH 323
IC+K+F L H R H
Sbjct: 140 ICNKSFPSGQALGGHKRCH 158
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 235 TAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPY 273
T + H+ P CN+C K F + H+R H DR Y
Sbjct: 132 TQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHK-DRGY 169
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 260 LMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH 319
L H + G +P+ C C K+F + H + K+ + C IC F LK H
Sbjct: 288 LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKL--WYC-ICGSDFKHKRSLKDH 344
Query: 320 MRTHTN 325
++ N
Sbjct: 345 IKAFGN 350
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 242 LKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLR 293
+KPF C C K F +G H + + G Y C C F K L H++
Sbjct: 298 IKPFMCRKCGKAFAVRGDWRTHEK-NCGKLWY-C-ICGSDFKHKRSLKDHIK 346
>At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 161
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTK 297
R +PC YCP+ F L H H +
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKR 62
>At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 180
Score = 29.9 bits (64), Expect = 3.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTK 297
R Y CN+C + F L H+ +H +
Sbjct: 38 RSYTCNFCRREFRSAQALGGHMNVHRR 64
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTGDR 271
+ + CN C + F L HM +H DR
Sbjct: 38 RSYTCNFCRREFRSAQALGGHMNVHRRDR 66
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 269 GDRPYPCNYCPKSFTQKSGLDQHLRIHTK 297
G+R Y C YC + F L H H K
Sbjct: 69 GERKYECQYCCREFGNSQALGGHQNAHKK 97
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 29.5 bits (63), Expect = 4.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 247 CNICHKRFTQQGGLMQHMRMH 267
C +C+K+FT L HMR H
Sbjct: 132 CCVCYKKFTSMKALYGHMRFH 152
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 233 THTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMH 267
T+T++ CNICHK F+ L H R H
Sbjct: 399 TNTSLSSSHNGDHVCNICHKSFSTGQALGGHKRCH 433
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 267 HTGDRPYPCNYCPKSFTQKSGLDQHLRIH 295
H GD + CN C KSF+ L H R H
Sbjct: 407 HNGD--HVCNICHKSFSTGQALGGHKRCH 433
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 216 FNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHK 252
F CE CG+GF E + H ++ H L P E +C +
Sbjct: 64 FRCEECGKGFRYEKYFKNHRSMMH--LSPNE-KVCEE 97
>At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 201
Score = 29.5 bits (63), Expect = 4.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 273 YPCNYCPKSFTQKSGLDQHLRIHTK 297
Y C YCP+ F + L H H K
Sbjct: 27 YKCKYCPRKFDKTQALGGHQNAHRK 51
>At4g34350.1 68417.m04881 LytB family protein contains Pfam profile:
PF02401 LytB protein
Length = 466
Score = 29.5 bits (63), Expect = 4.3
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 4 EERFVNVVPYSKIKQEIIVNDEDDVVNCRLCGKGFVSQIALTNHARMEHIDSYATGDPSI 63
E+ V ++P K++ V ++DDVV G G V ++ + N +++ +D+ +
Sbjct: 161 EDMDVKIIPVEDSKKQFDVVEKDDVVILPAFGAG-VDEMYVLNDKKVQIVDTTCPWVTKV 219
Query: 64 WTETKIFINNE-KPIPNGKMKIDEDL 88
W + E + +GK +E +
Sbjct: 220 WNTVEKHKKGEYTSVIHGKYNHEETI 245
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 29.5 bits (63), Expect = 4.3
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 12/107 (11%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCV 304
F C IC+K F + L H R H P QKS + +++ CV
Sbjct: 63 FVCEICNKGFQRDQNLQLHRRGHN---------LPWKLRQKSNKEVKKKVYV-CPEVSCV 112
Query: 305 --ICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 349
S+ +K+H ++C C K+Y S H K
Sbjct: 113 HHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSK 159
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 273 YPCNYCPKSFTQKSGLDQHLRIH-TKVKPYRCVI 305
Y C +C KSF L H+R H + RCVI
Sbjct: 4 YKCRFCFKSFINGRALGGHMRSHMLTLSAERCVI 37
Score = 29.1 bits (62), Expect = 5.7
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 12/98 (12%)
Query: 226 HDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQK 285
HD +Y + + G F+C C K F L H H ++ C T++
Sbjct: 180 HDSEDYKSSKSRGR-----FKCETCGKVFKSYQALGGHRASHKKNKA-----CMTK-TEQ 228
Query: 286 SGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTH 323
+ L + K K + C IC + F L H R+H
Sbjct: 229 VETEYVLGVKEK-KVHECPICFRVFTSGQALGGHKRSH 265
Score = 29.1 bits (62), Expect = 5.7
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 315 HLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKNH--NPANLTEEQRAKYAELIGLIS 372
H + ++ + F+C C K +K L H +H N A +T+ ++ + ++G+
Sbjct: 180 HDSEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKE 239
Query: 373 KEVVEVQI 380
K+V E I
Sbjct: 240 KKVHECPI 247
>At2g29660.1 68415.m03605 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 373
Score = 29.5 bits (63), Expect = 4.3
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 12 PYSKIKQ--EIIVNDEDDVVNCRLCGKGFVSQIALTNHARMEHIDSYATGDPSIWTETKI 69
P ++I Q E ++ D++ C CG+ F L NH ++H S S KI
Sbjct: 107 PETRIHQQTEFEISSSDEIFPCNSCGEIFPKINLLENHIAIKHAVSELIAGESSTNIVKI 166
Query: 70 FINNEKPIP-NGKMKIDEDLVKIKTEEVI 97
+ P N K + ++KI I
Sbjct: 167 IFKSGWPEQGNYKSPVINRILKIHNSSKI 195
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 29.5 bits (63), Expect = 4.3
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 330 QCGICEKRYKQSSHLNYHLKNHNPANLTEEQRAKYAELIGLISKEVVEVQID-SNEQILP 388
+C IC + L H++ H A T A AE+ ++E +E+ I S EQ
Sbjct: 189 ECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSMEQQRK 248
Query: 389 Y 389
Y
Sbjct: 249 Y 249
>At5g59920.1 68418.m07514 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 226 HDENEYITHTAIGHVKLKPFECNICHKRFTQQGG 259
HD Y+TH H+ EC +CHK +Q G
Sbjct: 289 HDHRIYLTH----HLGTGYSECGVCHKNVSQYKG 318
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTG 269
K EC IC FT L HMR H G
Sbjct: 259 KVHECGICGAEFTSGQALGGHMRRHRG 285
>At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein
(ZFP1) identical to zinc finger protein, ZFP1
gi|790673|gb|AAA87297; contains zinc finger, C2H2 type,
domain, Prosite:PS00028
Length = 228
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 262 QHMRMHTGD-RPYPCNYCPKSFTQKSGLDQHLRIHTK 297
QH + D R + CNYC + F L H H +
Sbjct: 56 QHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKR 92
>At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 253
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 299 KPYRCVICSKTFCQSVHLKQHMRTH 323
K Y C CS FC+S L HM H
Sbjct: 49 KVYECRFCSLKFCKSQALGGHMNRH 73
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 29.1 bits (62), Expect = 5.7
Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 273 YPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCG 332
+ C C K F L H H K I S LK+ + T+ + +C
Sbjct: 160 FECETCEKVFKSYQALGGHRASHKKK------IAETDQLGSDELKKKKKKSTS-SHHECP 212
Query: 333 ICEKRYKQSSHLNYHLKNHNPAN 355
IC K + L H ++H AN
Sbjct: 213 ICAKVFTSGQALGGHKRSHASAN 235
>At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit
(IRX5) nearly identical to cellulose synthase
[Arabidopsis thaliana] GI:27462651; contains Pfam
profile PF03552: Cellulose synthase
Length = 1049
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 303 CVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKNHNPANLTEEQRA 362
C +C C+ + ++ R++ N QC KR+K S + +N+ P + +E
Sbjct: 42 CHVCVYPVCKPCY--EYERSNGNKCCPQCNTLYKRHKGSPKIAGDEENNGPDDSDDELNI 99
Query: 363 KYAE 366
KY +
Sbjct: 100 KYRQ 103
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTG 269
K EC+IC F+ L HMR H G
Sbjct: 190 KTHECSICKAEFSSGQALGGHMRRHRG 216
>At2g36840.1 68415.m04518 ACT domain-containing protein contains
Pfam profile ACT domain PF01842
Length = 410
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 53 IDSYATGDPSIWTETKIFINNEKPIPNGKMKIDEDLVK 90
I + TGD W K+ IN E +P + KI+E++ K
Sbjct: 368 IGRHVTGDRE-WEVYKVLINEEDSLPIPRSKIEEEVWK 404
>At2g17600.1 68415.m02036 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 580
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Query: 181 CEYSLHHRDEHTKRRKGIR-----CQVCEKPMSVDAVQFPFNCETCGEGFHD 227
C S H HT R+ R C C+K F ++C TC FHD
Sbjct: 10 CRLS-HPTHSHTLSRRAGRIPPSGCFACDKEEPSPCSTFHYSCTTCDVEFHD 60
>At2g02470.1 68415.m00186 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 256
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 189 DEHTKRRKGIRCQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECN 248
DE +G C C D +F C+ C + FH + IT H+ K ++C
Sbjct: 192 DESEDDEQGAVCGACGDNYGTD--EFWICCDACEKWFHGKCVKITPAKAEHI--KHYKCP 247
Query: 249 ICHKR 253
C +
Sbjct: 248 TCSNK 252
>At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 300
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 291 HLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTN 325
H +TK PY C C+ F S HM +H N
Sbjct: 233 HSLPYTKYGPYTCPRCNGVFDTSQKFAAHMLSHYN 267
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 298 VKPYRCVICSKTFCQSVHLKQHMRTH 323
++ Y+C +C K+F L HMR+H
Sbjct: 1 MESYKCRVCFKSFVNGKALGGHMRSH 26
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 28.3 bits (60), Expect = 9.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 329 FQCGICEKRYKQSSHLNYHLKNHN 352
F C +C K +K+ +L H + HN
Sbjct: 68 FICEVCNKGFKRDQNLQLHRRGHN 91
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 28.3 bits (60), Expect = 9.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTK 297
R Y C++C + F L H+ +H +
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRR 71
>At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ;
contains Pfam profile: PF00096 Zinc finger, C2H2 type
Length = 172
Score = 28.3 bits (60), Expect = 9.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTK 297
R Y C++C + F+ L H+ IH +
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRR 59
>At3g05740.1 68416.m00644 DNA helicase (RECQI1) identical to DNA
Helicase [Arabidopsis thaliana] GI:10944747
Length = 606
Score = 28.3 bits (60), Expect = 9.9
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Query: 23 NDEDDVVNCRLCGKGFVSQIALTNHARMEHIDSYATGDPSIWTETKIFINNEKPIPNG-K 81
+D D + LCG F++ +A E D A + ++F + P NG
Sbjct: 40 DDGRDFITVELCGDDFLAALADFEEGTEEWDDIQAIESEAQGNLAEMFDKSTNPSDNGFD 99
Query: 82 MKIDEDLVKIKTEEVISSLEPTNIMDLASKDVS 114
D+D +++ + S EP ++ D S
Sbjct: 100 TDDDDDDSRVEVHVIEDSPEPKKKPEIVELDSS 132
>At1g55700.1 68414.m06378 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 679
Score = 28.3 bits (60), Expect = 9.9
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 204 EKPMSVDAVQFPFNCETCGEGFHDENEYI 232
E P+S+ + P C+ CG + N+Y+
Sbjct: 239 EHPLSIFPRRIPLPCDACGLSLENTNDYV 267
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 303 CVICSKTFCQSVHLKQHMRTH 323
C IC K F + +L+ HMR H
Sbjct: 246 CTICGKGFKRDANLRMHMRGH 266
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 303 CVICSKTFCQSVHLKQHMRTH 323
C IC K F + +L+ HMR H
Sbjct: 246 CTICGKGFKRDANLRMHMRGH 266
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.134 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,327,315
Number of Sequences: 28952
Number of extensions: 448523
Number of successful extensions: 1692
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1344
Number of HSP's gapped (non-prelim): 353
length of query: 411
length of database: 12,070,560
effective HSP length: 83
effective length of query: 328
effective length of database: 9,667,544
effective search space: 3170954432
effective search space used: 3170954432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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