Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001707-TA|BGIBMGA001707-PA|IPR002453|Beta tubulin,
IPR000217|Tubulin, IPR013838|Beta tubulin, autoregulation binding
site, IPR003008|Tubulin/FtsZ, GTPase, IPR008280|Tubulin/FtsZ,
C-terminal
         (409 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   9.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   9.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   9.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   9.1  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 315 VPPRGVKMAATFVGNTTAIQEIFKRIS 341
           +P    ++AA     TT  +EIF+R+S
Sbjct: 224 IPDTSKQLAAALGMQTTNEKEIFERLS 250


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 315 VPPRGVKMAATFVGNTTAIQEIFKRIS 341
           +P    ++AA     TT  +EIF+R+S
Sbjct: 226 IPDTSKQLAAALGMQTTNEKEIFERLS 252


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 315 VPPRGVKMAATFVGNTTAIQEIFKRIS 341
           +P    ++AA     TT  +EIF+R+S
Sbjct: 224 IPDTSKQLAAALGMQTTNEKEIFERLS 250


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 315 VPPRGVKMAATFVGNTTAIQEIFKRIS 341
           +P    ++AA     TT  +EIF+R+S
Sbjct: 226 IPDTSKQLAAALGMQTTNEKEIFERLS 252


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,769
Number of Sequences: 317
Number of extensions: 3462
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 4
length of query: 409
length of database: 114,650
effective HSP length: 58
effective length of query: 351
effective length of database: 96,264
effective search space: 33788664
effective search space used: 33788664
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)