Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001673-TA|BGIBMGA001673-PA|undefined
(172 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30) 30 0.90
SB_21884| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_20355| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 29 2.7
SB_13258| Best HMM Match : efhand (HMM E-Value=0.0048) 29 2.7
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 28 3.6
SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_13509| Best HMM Match : Acylphosphatase (HMM E-Value=1.6) 28 4.8
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 28 4.8
SB_35929| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_18985| Best HMM Match : TUDOR (HMM E-Value=8.3e-37) 27 8.3
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 124 ITWTTHDTHATFKLSLDSPQTSSSTGDNHAAFSSVSTHCKLRAALALAS 172
+T H+THA +L DSP +S G + A + + C+ +AAL S
Sbjct: 3656 VTIPCHNTHAWAELPTDSPTITSVHGLDFEAEGELRSLCQEKAALRATS 3704
>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
Length = 1093
Score = 30.3 bits (65), Expect = 0.90
Identities = 18/77 (23%), Positives = 33/77 (42%)
Query: 7 RHFQDKAHIYIQVPNNSIRTVGLPSNITRSVEDLPSVRINNLGYHNPRILEDKSKSSTVV 66
+H QD+ ++ Q ++ + N + + ED P+ R N N L+ S+ +
Sbjct: 422 KHHQDQLQLHEQHQTDNRQPQQAHYNSSLTTEDTPTCRTCNCRQKNTCPLDGNCLQSSEI 481
Query: 67 PQQASIAASTGPSQPTH 83
Q T P +PT+
Sbjct: 482 YQATVTRKETAPQKPTY 498
>SB_21884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 76 TGPSQPTHRASWSYGTQLHCLITPLQFIAAHDRIINA 112
TG S P+ + Y TQ+ L T LQ + AH NA
Sbjct: 62 TGSSTPSVSGNTDYSTQIKNLTTELQHLGAHMNFHNA 98
>SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 41 PSVRINNLGYHNPRILEDKSKSSTVVPQQASIAASTGPSQPTHRA--SWSYGTQLH 94
P+V++ + G+ RI+E+KS +VV A +A +QP +R+ WS G ++
Sbjct: 630 PAVKLCDFGF--ARIIEEKSFRRSVVGTPAYLAPEVLLNQPYNRSLDMWSVGVVIY 683
>SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1495
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 23 SIRTVGLPSN--ITRSVEDLPSVRINNLGYHNPRILEDKSKSSTVVPQQ 69
+I+ G SN I R+ ED+PSV N+G N + D S + +P Q
Sbjct: 811 TIKGCGAESNELILRTFEDVPSVAPGNVGTLNLTSMTDLRVSWSAIPPQ 859
>SB_20355| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 105 AHDRIINAWGHTSPAWQLCI-TWTT-HDTHATFKLSLDSPQTSSSTGDN 151
A D +IN W + AW I TW T +T T + D+ TG N
Sbjct: 70 AWDTVINTWDTVTNAWDTVINTWDTGTNTRDTVTNARDAVTNMRDTGTN 118
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 28.7 bits (61), Expect = 2.7
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 18 QVPNNSIRTVGLPSNITRSVEDLPSVRINNLGYHNPRILEDKSKSSTVVPQQASIAASTG 77
Q+ + ++T + N R V V+I + G +IL KSK++TV+ I+
Sbjct: 123 QILHRDLKTQNILLNKKRKV-----VKIGDFGIS--KILSSKSKANTVIGSPCYISPELC 175
Query: 78 PSQPTHRAS--WSYGTQLHCLIT 98
+P ++ S WS G L+ L T
Sbjct: 176 EGKPYNQKSDVWSLGCVLYELTT 198
>SB_13258| Best HMM Match : efhand (HMM E-Value=0.0048)
Length = 305
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 36 SVEDLPSVRINNLGYHNPRILEDKSKSSTVVPQQASIAASTGPSQPTHRAS 86
S ED+ + R+ +LGYH+ S +S Q+A+ + T P P+ R +
Sbjct: 114 SAEDIRAARLRSLGYHS------NSDTSLNNSQRATKSTPTSPQSPSTRVT 158
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 67 PQQASIAASTGPSQPTH 83
PQ AS+ S G SQPTH
Sbjct: 548 PQHASVGTSMGQSQPTH 564
>SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 751
Score = 28.3 bits (60), Expect = 3.6
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 55 ILEDKSKSSTVVPQQASIAASTGPSQPTHRASWSYGTQLHCLITPLQFIAAHDRIINAWG 114
+LE S T+ P Q + +P S +GT +T IA W
Sbjct: 247 VLEMVSPKKTITPAQVKPSPPPTKPKPARSGSVDHGTPSPGKVTSTVIIAPTPSPDAQWK 306
Query: 115 HTSPAWQLCITWTTHDTHAT 134
+TS L +T T+ D+H T
Sbjct: 307 NTSVT--LKLTDTSVDSHVT 324
>SB_13509| Best HMM Match : Acylphosphatase (HMM E-Value=1.6)
Length = 166
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 124 ITWTTHDTHATFKLSLDSPQTSSSTGDNHAAFSSVSTHCKLRAALALAS 172
+T H+ HA KL + P +S G + A + + C+ +AAL S
Sbjct: 56 VTTPCHNNHAWAKLPTEPPAITSVHGIDFEAEGELRSLCQEKAALRATS 104
>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
Length = 851
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 56 LEDKSKSSTVVPQQASIAASTGPSQPTHRASWSYGT 91
+ D S ST P+ + I AS GPS P + S GT
Sbjct: 196 IPDFSNFSTCSPRYSRILASPGPSSPASDSDNSPGT 231
>SB_35929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 71 SIAASTGPSQPTHRASWSYGTQLHCLI--TPLQFIAAHDRIINAWGHTSPAWQLCIT 125
S + G S P H+ ++SYG CLI ++ ++ I+AW P+ + +T
Sbjct: 34 STPRNCGLSFPEHKQTFSYGKAEACLIFGDIRLWLVMYELFIHAWFFKLPSREFYLT 90
>SB_18985| Best HMM Match : TUDOR (HMM E-Value=8.3e-37)
Length = 1219
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 31 SNITRSVEDLPSVRI--NNLGYHNPRILEDKSKSSTVVPQQASIAASTGP 78
S+ TRSV+D P V I +N P I E K +++ P + +T P
Sbjct: 264 SDTTRSVDDGPEVEIEEDNDEKPPPEIEEQKPEANNEKPTNTDVPEATKP 313
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.126 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,210,156
Number of Sequences: 59808
Number of extensions: 246446
Number of successful extensions: 557
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 549
Number of HSP's gapped (non-prelim): 15
length of query: 172
length of database: 16,821,457
effective HSP length: 77
effective length of query: 95
effective length of database: 12,216,241
effective search space: 1160542895
effective search space used: 1160542895
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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