Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001426-TA|BGIBMGA001426-PA|IPR004344|Tubulin-tyrosine
ligase
(636 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39596| Best HMM Match : TTL (HMM E-Value=0) 177 2e-44
SB_23703| Best HMM Match : TTL (HMM E-Value=0) 168 1e-41
SB_51790| Best HMM Match : TTL (HMM E-Value=0) 168 1e-41
SB_18066| Best HMM Match : TTL (HMM E-Value=3.5e-10) 155 1e-37
SB_6924| Best HMM Match : TTL (HMM E-Value=4.4e-09) 107 3e-23
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 1e-14
SB_31058| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 3e-14
SB_19129| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 2e-07
SB_47535| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-07
SB_42193| Best HMM Match : DUF1168 (HMM E-Value=0.4) 46 1e-04
SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_10758| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.043
SB_17937| Best HMM Match : TTL (HMM E-Value=4.4e-07) 34 0.40
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 33 0.70
SB_5486| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.70
SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10) 32 1.6
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 31 2.1
SB_34295| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_20144| Best HMM Match : E-MAP-115 (HMM E-Value=0.41) 31 3.7
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_15163| Best HMM Match : VAR1 (HMM E-Value=3.1) 30 6.5
SB_4040| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.00044) 29 8.6
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 29 8.6
>SB_39596| Best HMM Match : TTL (HMM E-Value=0)
Length = 808
Score = 177 bits (432), Expect = 2e-44
Identities = 94/220 (42%), Positives = 128/220 (58%), Gaps = 6/220 (2%)
Query: 106 FGEALNYSKTRKNKTFIIKPECGSQGRGIYLTKSLKDIKPSDKL----ICQVYLSKPFLV 161
+ E + + K K +IIKP+ GSQG GIYL + D+ S L I Q Y+S P L+
Sbjct: 369 YSELVGHVGKHKGKVYIIKPDLGSQGDGIYLMTNPYDVHFSPLLAKPCIVQEYISNPLLL 428
Query: 162 DGYKFDIRVYTLITSCDPLRIFVYNEGLVRFATSRYADPNANNTTNVFMHLTNYALNKHS 221
+ +KFD+R+Y L+ DPL I+V EG+ RF T Y P+ N +MHLTNY+LNK+S
Sbjct: 429 EKFKFDLRIYVLVKCLDPLEIYVCREGMGRFCTEVYRPPSQKNLHRCYMHLTNYSLNKYS 488
Query: 222 RTYVY--DSEAGSKRKISTLNKILLSQGVDLDKLWHSIDEVIVKTIISAWPILKHSYHAC 279
+YV D + GSKRK+S + K L S G +++ LW ID +I +TII+ P L
Sbjct: 489 SSYVQSDDDDKGSKRKLSCVFKQLQSNGCNIETLWTDIDFIICRTIIAFMPNLLIEDQIV 548
Query: 280 FPSHDMVHACFEILGFDILLDHKLHPYILEVNHSPSFHTD 319
CF++LGFDIL+D P +LEVN SPS D
Sbjct: 549 TLDLKQKLRCFQVLGFDILIDEDFKPILLEVNSSPSLKID 588
>SB_23703| Best HMM Match : TTL (HMM E-Value=0)
Length = 657
Score = 168 bits (408), Expect = 1e-41
Identities = 105/296 (35%), Positives = 163/296 (55%), Gaps = 27/296 (9%)
Query: 112 YSKTRK--NKTFIIKPECGSQGRGIYLTKSLKDIKPSDKLICQVYLSKPFLVDGYKFDIR 169
YSK + +I KP S+GRGI+L ++L D+ + Q Y+S P L+ GYKFD+R
Sbjct: 113 YSKKKDATKNIWICKPADLSRGRGIFLFENLLDLTYDSAAVVQRYISSPLLICGYKFDLR 172
Query: 170 VYTLITSCDPLRIFVYNEGLVRFATSRYADPNANNTTNVFMHLTNYALNKHSRTYVYDSE 229
+Y L+TS PL I+VY+EG+VRF+T ++ + + +N+F HLTN ++NK +Y D E
Sbjct: 173 LYVLVTSFHPLCIYVYHEGMVRFSTEKF---DLSTLSNLFSHLTNSSINKQGPSYSLDKE 229
Query: 230 ---AGSKRKISTLNKILLSQGVDLDKLWHSIDEVIVKTIISAWPILKHSYHACFPSHDMV 286
G K +S L + LWH I+ +I+ T+++ P + S C
Sbjct: 230 RIGTGCKWTLSQLRAYFHQHNIGDGMLWHRINTIIILTLLTQAPEVSKS---C------- 279
Query: 287 HACFEILGFDILLDHKLHPYILEVNHSPSFHTDTQLDREVKENLLTDTFTMLNIWQ--CD 344
CFE+ GFDIL+D L P++LEVN SPS +D +D +K+ LL DTF +LN Q C
Sbjct: 280 TNCFELYGFDILIDENLKPWLLEVNFSPSLGSDCLVDLTIKKPLLNDTFELLNFNQDLCI 339
Query: 345 KKRVLE-----EDRKRIRDRLLQTNKYAETTTID--EKDREKTPWQTQIQWEESHL 393
K L+ + R + +LL + ++ + + + + K +Q + Q EES +
Sbjct: 340 PKATLKSSHLSKSNVRPKSQLLSSKNHSLRSALKPLQIPKSKAIFQFKSQPEESDM 395
Score = 29.9 bits (64), Expect = 6.5
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 51 ESIRKVASAFGMREVSEE----DA-WNFYWTDMSVSVERAKEMKRFQRINHYP 98
E +R V G E EE DA W+ +W ++ + +QR+NH+P
Sbjct: 14 ELLRDVCLERGWHEFDEEAVDPDATWSLWWKSSGFRTGEYEDCRPWQRLNHFP 66
>SB_51790| Best HMM Match : TTL (HMM E-Value=0)
Length = 536
Score = 168 bits (408), Expect = 1e-41
Identities = 105/296 (35%), Positives = 163/296 (55%), Gaps = 27/296 (9%)
Query: 112 YSKTRK--NKTFIIKPECGSQGRGIYLTKSLKDIKPSDKLICQVYLSKPFLVDGYKFDIR 169
YSK + +I KP S+GRGI+L ++L D+ + Q Y+S P L+ GYKFD+R
Sbjct: 113 YSKKKDATKNIWICKPADLSRGRGIFLFENLLDLTYDSAAVVQRYISSPLLICGYKFDLR 172
Query: 170 VYTLITSCDPLRIFVYNEGLVRFATSRYADPNANNTTNVFMHLTNYALNKHSRTYVYDSE 229
+Y L+TS PL I+VY+EG+VRF+T ++ + + +N+F HLTN ++NK +Y D E
Sbjct: 173 LYVLVTSFHPLCIYVYHEGMVRFSTEKF---DLSTLSNLFSHLTNSSINKQGPSYSLDKE 229
Query: 230 ---AGSKRKISTLNKILLSQGVDLDKLWHSIDEVIVKTIISAWPILKHSYHACFPSHDMV 286
G K +S L + LWH I+ +I+ T+++ P + S C
Sbjct: 230 RIGTGCKWTLSQLRAYFHQHNIGDGMLWHRINTIIILTLLTQAPEVSKS---C------- 279
Query: 287 HACFEILGFDILLDHKLHPYILEVNHSPSFHTDTQLDREVKENLLTDTFTMLNIWQ--CD 344
CFE+ GFDIL+D L P++LEVN SPS +D +D +K+ LL DTF +LN Q C
Sbjct: 280 TNCFELYGFDILIDENLKPWLLEVNFSPSLGSDCLVDLTIKKPLLNDTFELLNFNQDLCI 339
Query: 345 KKRVLE-----EDRKRIRDRLLQTNKYAETTTID--EKDREKTPWQTQIQWEESHL 393
K L+ + R + +LL + ++ + + + + K +Q + Q EES +
Sbjct: 340 PKATLKSSHLSKSNVRPKSQLLSSKNHSLRSALKPLQIPKSKAIFQFKSQPEESDM 395
Score = 29.9 bits (64), Expect = 6.5
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 51 ESIRKVASAFGMREVSEE----DA-WNFYWTDMSVSVERAKEMKRFQRINHYP 98
E +R V G E EE DA W+ +W ++ + +QR+NH+P
Sbjct: 14 ELLRDVCLERGWHEFDEEAVDPDATWSLWWKSSGFRTGEYEDCRPWQRLNHFP 66
>SB_18066| Best HMM Match : TTL (HMM E-Value=3.5e-10)
Length = 249
Score = 155 bits (375), Expect = 1e-37
Identities = 63/103 (61%), Positives = 84/103 (81%)
Query: 105 SFGEALNYSKTRKNKTFIIKPECGSQGRGIYLTKSLKDIKPSDKLICQVYLSKPFLVDGY 164
++G+ +Y + +KNKTFI KPE GSQG+GI +TK+ KDIKP + L+CQ Y+SKPFL+DG+
Sbjct: 62 NYGDFQSYCRQKKNKTFITKPESGSQGKGIVITKNPKDIKPGEHLVCQQYVSKPFLIDGF 121
Query: 165 KFDIRVYTLITSCDPLRIFVYNEGLVRFATSRYADPNANNTTN 207
KFD+R+Y L+TSCDPLR+FVY +GL RFATS+Y +P NN N
Sbjct: 122 KFDLRIYVLVTSCDPLRVFVYEDGLARFATSKYTEPQNNNLVN 164
Score = 87.0 bits (206), Expect = 4e-17
Identities = 38/88 (43%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 310 VNHSPSFHTDTQLDREVKENLLTDTFTMLNIWQCDKKRVLEEDRKRIRDRLLQTNKYAET 369
VNHSPSF TD+ LD+E+KE L++D +LN CD+++++EED++R+R+RLLQ + E
Sbjct: 163 VNHSPSFTTDSPLDKEIKEGLMSDALALLNFGACDRRKIIEEDKRRVRERLLQKQRPKEP 222
Query: 370 TTID-EKDREKTPWQTQIQWEESHLGNF 396
D E ++ W T ++E+ HLG +
Sbjct: 223 KRDDCENQQQYNEWIT--KYEDKHLGKY 248
>SB_6924| Best HMM Match : TTL (HMM E-Value=4.4e-09)
Length = 458
Score = 107 bits (257), Expect = 3e-23
Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Query: 259 EVIVKTIISAWPILKHSYHACFP--SHDMVHACFEILGFDILLDHKLHPYILEVNHSPSF 316
EVIVKT+I A P + HSY C P + CFE+LGFDILLD KL P++LE+N SPSF
Sbjct: 146 EVIVKTLIVAQPHVLHSYRMCRPGAATGSDSVCFELLGFDILLDRKLKPWLLEINRSPSF 205
Query: 317 HTDTQLDREVKENLLTDTFTMLNIWQCDKKRVLEEDRKRIRDRLLQTNKYAETT 370
TD++LD+EVK L DT +LNI D++R + ++ + RLL K +E T
Sbjct: 206 GTDSKLDQEVKGGALRDTLRLLNIKPSDRRRGMAAEKAESQRRLLTQPKRSEYT 259
Score = 69.3 bits (162), Expect = 9e-12
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 146 SDKLICQVYLSKPFLVDGYKFDIRVYTLITSCDPLRIFVYNEGL 189
+++ I +V PFL+DGYKFD+RVY L+TSCDPLRIFVYN+GL
Sbjct: 102 TEQEIRRVVAGHPFLLDGYKFDLRVYVLVTSCDPLRIFVYNDGL 145
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 78.6 bits (185), Expect = 1e-14
Identities = 48/199 (24%), Positives = 96/199 (48%), Gaps = 8/199 (4%)
Query: 138 KSLKDIKPSDKLICQVYLSKPFLVDGYKFDIRVYTLITSCDPLRIFVYNEGLVRFATSRY 197
+ + ++P + Q Y++ P L++G+KFD+R Y I S P I +Y+ G +R + Y
Sbjct: 795 RRISHVRPPQGRVIQRYITNPLLLNGFKFDVRTYMFIASTRPY-IVLYHPGYIRVSCVPY 853
Query: 198 ADPNANNTTNVFMHLTN-YALNKHSR-TYVYDSEAGSKRKISTLNKILLSQGVDLDKLWH 255
+ + ++T + HLTN Y KH + + + S + ++ L + W
Sbjct: 854 SPYSTESSTELHAHLTNQYVQKKHPLFSSMKEETVWSFERAQAYIDEHHTKEKQLPENW- 912
Query: 256 SIDEVIVKTIISAWPILKHSYHACFPSHDMVHACFEILGFDILLDHKLHPYILEVNHSPS 315
+ K + I+ +H+ H F++LGFD ++D +++E+N +PS
Sbjct: 913 -LFTTFTKRM---QQIMLTCFHSVRKKLHRRHGYFDLLGFDFMIDENFKVWLIEINVNPS 968
Query: 316 FHTDTQLDREVKENLLTDT 334
T Q+ +++ N++ +T
Sbjct: 969 LSTSCQVLKDLMPNMVDNT 987
>SB_31058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 77.4 bits (182), Expect = 3e-14
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 259 EVIVKTIISAWPILKHSYHACFPSHDMVHACFEILGFDILLDHKLHPYILE 309
+ I+KT+++A PILKH+Y CFP+H+ ACFEILGFD+LLD KL P+++E
Sbjct: 1 DCIIKTLVTAHPILKHNYRTCFPNHNKGSACFEILGFDVLLDKKLKPWVIE 51
>SB_19129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 54.8 bits (126), Expect = 2e-07
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 24/195 (12%)
Query: 157 KPFLVDGYKFDIRVYTLITSCDPLRIFVYNEGLVRFATSRYADPNANNTTNVFMHLTNYA 216
+P L+ G KFDIR + L+T +PL ++ Y + +RF + + + +V +HL N +
Sbjct: 26 RPLLIYGVKFDIRQWFLVTDWNPLTLWFYEDCYLRFCSQNF----SLEDFHVSIHLANNS 81
Query: 217 LNK-HSRTYVYDSEAGSKRKIST--------LNKILLSQGVDLDKLWHSIDEVIVKTIIS 267
+ K + D + S+ N + +S L H D VI
Sbjct: 82 IQKNYDNNSTRDKRLPDENMWSSDEFKAYLKQNSLTVSCHYRKRDLGHMWDSVI------ 135
Query: 268 AWPILKHSYHACFPSHDMVHAC----FEILGFDILLDHKLHPYILEVNHSPSFHTDTQLD 323
+P +K S V C FE+ G D ++ P+++E+N SP+ T +
Sbjct: 136 -YPGMKQGVMNVLQSCQEVVECRKNSFELYGADFIIGVDYKPWLIEINCSPTMGASTAVT 194
Query: 324 REVKENLLTDTFTML 338
R++ +L DT ++
Sbjct: 195 RKLCAQVLEDTMKVI 209
>SB_47535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 53.6 bits (123), Expect = 5e-07
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 31/193 (16%)
Query: 62 MREVSEEDAWNFYWT-DMSVSV----ERAKEMKRFQRINHYPGM--------LEICSFG- 107
+R S W+ W+ D ++ ER K+++ Q++NH+PG L + F
Sbjct: 89 LRVESAGQRWDVLWSHDYPFAIDELDERLKQLEPHQKVNHFPGSGFITNKASLAVSHFPF 148
Query: 108 EALNYSKTRKNKTFI---------IKPECGSQGRGIYLTKSLKDIK---PSDKLICQVYL 155
L + + K F+ I E + RGI++ K +DI S + ++
Sbjct: 149 HPLAFEIPKDKKKFLKEVAKNPQKIWVEKSNMHRGIHIKKP-QDINLDSSSRDTFVEEFI 207
Query: 156 SKPFLVDGYKFDIRVYTLITSCDPLRIFVY-NEGLVR--FATSRYADPNANNTTNVFMHL 212
S P+L+D K D+ +YT++TS +PLR++VY +E L+R F R+ D + V++
Sbjct: 208 SNPYLIDKRKCDLGIYTVLTSINPLRVYVYEDEILIRNFFEMVRF-DFILDENAGVWLME 266
Query: 213 TNYALNKHSRTYV 225
N + N S +++
Sbjct: 267 VNMSPNLSSGSHI 279
Score = 33.5 bits (73), Expect = 0.53
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 285 MVHACFEILGFDILLDHKLHPYILEVNHSPSFHTDTQLDREV 326
++ FE++ FD +LD +++EVN SP+ + + +D V
Sbjct: 242 LIRNFFEMVRFDFILDENAGVWLMEVNMSPNLSSGSHIDNAV 283
>SB_42193| Best HMM Match : DUF1168 (HMM E-Value=0.4)
Length = 425
Score = 45.6 bits (103), Expect = 1e-04
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 398 RVYPVG--EQYASLFQQPSGSLYTGTASSRARGDCTRIQREEFQQSKAKAEA 447
R+YP G E+YA F+ S SL+ TA+S+AR +C R+QRE+ Q + + +A
Sbjct: 2 RIYPQGNEEKYARFFEN-SCSLFQETAASKARIECARVQREQIQAKQQEVDA 52
>SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 42.3 bits (95), Expect = 0.001
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 257 IDEVIVKTIISA-WPILKHSYHACFPSHDMVHACFEILGFDILLDHKLHPYILEV 310
I++V+VKTII+ PI AC CFEI GFDIL+D L P++LE+
Sbjct: 85 IEDVVVKTIIAGELPIAS----ACKMFMPHPGNCFEIYGFDILIDENLRPWLLEL 135
>SB_10758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 37.1 bits (82), Expect = 0.043
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 250 LDKLWHSIDEVIVKTIISAWPILKHSYHACFPSHDMVHACFEILGFDILLDHKLHPYILE 309
L+K W +++ I + I + +L S S + A + G D+LL L P I+
Sbjct: 750 LNKSWDHVEKKIFQHIGELFHLLSSSLSPLSQSSSPLSAVY---GVDVLLQENLEPLIIG 806
Query: 310 VNHSPSFHTDTQLDREV 326
VN PSF D Q+ +EV
Sbjct: 807 VNALPSFAND-QVAKEV 822
>SB_17937| Best HMM Match : TTL (HMM E-Value=4.4e-07)
Length = 491
Score = 33.9 bits (74), Expect = 0.40
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 135 YLTKSLKDIKPSDKLICQVYLSKPFLVDGYKFDIRVYTLITSCDPLRIFVYNEGLVRFAT 194
Y T LK I + K I + L V KFD+R +TS PLR++V +RFA
Sbjct: 227 YGTHKLKQI--TSKYIDKQVLFHRDDVGPVKFDVRYMLFVTSVAPLRLYVDRVFWLRFAN 284
Query: 195 SRYADPNANNTTNVFMHLT--NYALNKHSRTYVYD 227
+A ++ H T NY +K + + YD
Sbjct: 285 KPFA---LDHFEEYDRHCTVMNYGTHKLKQIHHYD 316
Score = 32.7 bits (71), Expect = 0.92
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 140 LKDIKPSDKLICQVYLSKPFL-----VDGYKFDIRVYTLITSCDPLRIFVYNEGLVRFAT 194
L + KP I Y+ K L V KFD+R +TS PLR++V +RFA
Sbjct: 148 LGEDKPPLHKIASKYIDKQVLFHRDDVGPVKFDVRYMLFVTSVAPLRLYVDRVFWLRFAN 207
Query: 195 SRYA 198
+A
Sbjct: 208 KPFA 211
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 33.1 bits (72), Expect = 0.70
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 346 KRVLEEDRKRIRDRLLQTNKYAETTTIDEKDREKTPWQTQIQWEES 391
K + EE +++ ++R+ + K+ E T +EK+REK +T+ + +ES
Sbjct: 131 KELKEEKKEKEKERMKKEEKHKEKTRKEEKEREKEKEKTKKEEKES 176
>SB_5486| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 33.1 bits (72), Expect = 0.70
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 157 KPFLVDGYKFDIRVYTLITSCDPLRIFVY 185
+P L+ G KFDIR + L+T +PL ++ Y
Sbjct: 30 RPLLIYGVKFDIRQWFLVTDWNPLTLWFY 58
>SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1847
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 317 HTDTQLDREVKENLLTDTFTMLNIWQCDKKRVLEED 352
HT+T LDR +E +L + M+ +W+C +VL+ED
Sbjct: 295 HTNT-LDR--REAILAQGYEMVEVWECAFDKVLQED 327
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 319 DTQLDR-EVKENLLTDTFTMLNIWQCDK--KRVLEEDRKRIRDRLLQTNKYAETTTIDEK 375
+ Q DR + K +L + ++M + + DK ++ EED+K I D+ + K+ +T EK
Sbjct: 532 EKQRDRIQTKNSLESYAYSMKSTVEDDKVKDKISEEDKKAILDKCTEVLKWLDTNQTAEK 591
Query: 376 D 376
D
Sbjct: 592 D 592
>SB_34295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 31.1 bits (67), Expect = 2.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 290 FEILGFDILLDHKLHPYILEVNHSPSFHTDT 320
FE+ GFD + D ++LEVN PS +T
Sbjct: 31 FELYGFDFIFDSNGKAWLLEVNGGPSMTANT 61
>SB_20144| Best HMM Match : E-MAP-115 (HMM E-Value=0.41)
Length = 416
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 324 REVKENLLTDTFTMLNIWQCDKKRVLEED--RKRIRDRLLQTNKYAETTTIDEKDREK 379
+E +E L D + + + +EE +K +R+ L+ KY E DE+DRE+
Sbjct: 202 KEKQEELALDMKILEKLLDDTRNEAMEESQRKKELREENLRFMKYCEMNRKDEEDRER 259
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 502 EDKNKATRIQSKQPIPEESKPQYVLCSFEPDPIVEKDERERVNLLAQRD 550
E KN+ R SKQ IPE + P P +D RE+V +L + D
Sbjct: 1258 ESKNRELRAASKQ-IPERAPPAASEVIVRPTRGAARDAREKVRVLLEDD 1305
>SB_15163| Best HMM Match : VAR1 (HMM E-Value=3.1)
Length = 354
Score = 29.9 bits (64), Expect = 6.5
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 238 TLNKILLSQGVDLDKLWHSIDEVIVKTIISAWPILKHSYHACFPSHDMVHACFEILGFDI 297
T+N+ LL ++ D L H+I++ +++ I+ +L+H+ + H + +
Sbjct: 146 TINQDLLQHNINQDLLQHTINQDLLQHTINQ-DLLQHTINQDLLQHTINQDLLQHTINQD 204
Query: 298 LLDHKLHPYILE--VNHSPSFHTDTQ--LDREVKENLLTDT 334
LL H ++ +L+ +N HT Q L + ++LL T
Sbjct: 205 LLQHTINQDLLQHTINQDLLQHTINQDLLQHTINQDLLQHT 245
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 238 TLNKILLSQGVDLDKLWHSIDEVIVKTIISAWPILKHSYHACFPSHDMVHACFEILGFDI 297
T+N+ LL ++ D L H+I++ +++ I+ +L+H+ + H + +
Sbjct: 236 TINQDLLQHTINQDLLQHTINQDLLQHTINQ-DLLQHTINQDLLQHTINQDLLQHTINQD 294
Query: 298 LLDHKLHPYILE--VNHSPSFHTDTQ--LDREVKENLLTDTFTM 337
LL H ++ +L+ +N HT Q L + ++LL T+
Sbjct: 295 LLQHTINQDLLQHTINQDLLQHTINQDLLQHTINQDLLXXXXTI 338
>SB_4040| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.00044)
Length = 817
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 88 MKRFQRINHYPGMLEICSFGEALNYSKTRKNKTFIIKPECGSQGRGIYLTKSLKDIKPSD 147
+K +R ++ GM+ I F L T + F + + GI++ +SLKD+K
Sbjct: 185 IKNLRRGIYFKGMVNILGFTPKLEIGITEEAIFFDAELDPVRFAGGIHILRSLKDMKQGP 244
Query: 148 KLI 150
K++
Sbjct: 245 KIV 247
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 363 TNKYAETTTIDEKDREK-TPWQTQIQWEESHLGNFRRVYPVGEQYASLFQQPSGSLYTGT 421
TN E++T +K RE P+ +++ S G +R P S +Q PS S +
Sbjct: 221 TNNRTESSTSLQKPRENGLPYNRSSKYD-SQSGGSQRTTPA----VSPYQSPSSSARSSP 275
Query: 422 ASSRARGDCTRIQREEFQQSKAKAEAL 448
S +R +FQQ AE +
Sbjct: 276 RGSPTASPSISRRRAKFQQQAEAAEGI 302
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.133 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,962,763
Number of Sequences: 59808
Number of extensions: 884303
Number of successful extensions: 2209
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2149
Number of HSP's gapped (non-prelim): 43
length of query: 636
length of database: 16,821,457
effective HSP length: 87
effective length of query: 549
effective length of database: 11,618,161
effective search space: 6378370389
effective search space used: 6378370389
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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