Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001407-TA|BGIBMGA001407-PA|undefined
(422 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24) 33 0.33
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 32 0.76
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.0
SB_52675| Best HMM Match : DUF823 (HMM E-Value=5.6) 31 2.3
SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 3.1
SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019) 30 4.1
SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 30 4.1
SB_23357| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_43373| Best HMM Match : Herpes_UL3 (HMM E-Value=2.7) 29 5.4
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 29 5.4
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 29 7.1
SB_948| Best HMM Match : Sec62 (HMM E-Value=9.5) 29 7.1
SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35) 29 9.4
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 29 9.4
>SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24)
Length = 251
Score = 33.5 bits (73), Expect = 0.33
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 19 SSLELPHDFNKKTEDNADSETARDRRGVIEEEKFYNIQADRQQNVNQPTPWLPGPLLPEE 78
+S + PH+ + + +N D T +R GV EE+ + QQ + + W+P L EE
Sbjct: 54 NSCKCPHELHVLSTNNNDQNTPEERMGVEEEDPPMLQGSHLQQAMMEGYEWVPRGLTSEE 113
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 32.3 bits (70), Expect = 0.76
Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 9/161 (5%)
Query: 19 SSLELPHDFNKKTEDNADSETARDRRGVIEEEK-FYNIQADRQQNVNQ--PTPWLPGPLL 75
S + P +KTE+N +S + + + E+ + A R P P P P+
Sbjct: 725 SPQQQPQGAQQKTENNVNSPNTKATKPIASEDSSVVAMPAARPVTPKPVTPKPVTPKPVT 784
Query: 76 PEEDPTTKISLTNEV----KDVFPSYQTTEKATDRPTGRGARASNENWVKLPY-PNREDS 130
P+ T + + V P + E + A A E KLP PN +
Sbjct: 785 PKPVTTRPVEAVRHSPRRDRGVVPPEKKRETSNSEKKKEVATAPTEK-KKLPTAPNEKKK 843
Query: 131 HRDDILTPPQPSGELINSRMPRVNFVTQNRGIEASESRHDK 171
+ I+T + + + S NF ++ EA + DK
Sbjct: 844 DANVIITDKKDNANVAVSDKKEANFNVSDKKKEADTNASDK 884
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 31.9 bits (69), Expect = 1.0
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 80 PTTKISLTNEVKDVFPSYQTTEKATDRPTGRGARASNENWVKLPYPN 126
PTT+ ++ ++KD+ S Q+ ++A DR T + E VK +PN
Sbjct: 327 PTTEGTMEKQLKDMKASGQSKKQADDRQTVELLKKPKEYVVKFSFPN 373
>SB_52675| Best HMM Match : DUF823 (HMM E-Value=5.6)
Length = 190
Score = 30.7 bits (66), Expect = 2.3
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 317 APLRKDERNFRDLAPAGTDHREKKVDEKVTPAAVLPQKEDKPKSNQDNRNVNRNVINSHQ 376
APL +N LA + + K P A ++ D+ + +N +N N H+
Sbjct: 101 APLCICNKNIEPLASDSIITKRGERKRKKEPGAGEERQTDRREKESNNCIINSN----HR 156
Query: 377 YHDSADSYSKPT 388
Y+DS Y+ PT
Sbjct: 157 YNDSGGDYNTPT 168
>SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 319 LRKDERNFRDLAPAGTDHREKKVDEKVTPAAVLPQKEDKPKSNQDNRNVNRNVINS 374
++KD+ + + H+ ++ EK+TPA VLP+K+ +P D R+ R + N+
Sbjct: 558 IKKDDGTYVTTHYQPSPHQSFEL-EKITPANVLPRKDPEPAC--DLRSTERELCNN 610
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 30.3 bits (65), Expect = 3.1
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 29 KKTEDNADSETARDRRGVIEEEKFYNIQADRQQNVNQPTPWLPGPLLPEEDPTTKISLTN 88
+K++ SE ++D++ E K ++ + ++ QPT P LP +P K + T+
Sbjct: 1488 EKSKMQTKSENSKDQKTENETSK---VEKAQDKSTVQPTSLRP-LALPTGEPEVKTTTTS 1543
Query: 89 EVKDVFPSYQTTEKATDRPTGRGARASNENWVKLPYPNREDSHRDDILTP 138
EV V T+K + R + +N P+ E + D+ P
Sbjct: 1544 EVNHVTEKTPATKKPEVPFSQRATETTKKN---EPHLETERKSKKDLTEP 1590
>SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 3/106 (2%)
Query: 16 TGVSSLELPHDFNKKTEDNADSETARDRRGVIEEEKFYNIQADRQQNVNQPTPWLPGPLL 75
TG L K+ + N + RR +++ N Q N GPL+
Sbjct: 661 TGGKEELLDKQKQKEEKQNKQGPRSPRRRPDSQQKDLNNSQRKHDSNSQAQKGSAAGPLV 720
Query: 76 ---PEEDPTTKISLTNEVKDVFPSYQTTEKATDRPTGRGARASNEN 118
P+ + + + +V+D P Q + +GRG++ +N
Sbjct: 721 EETPQVEEKPEKAKDGKVEDPLPQRQQNRRRNQNKSGRGSKPPRDN 766
>SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019)
Length = 653
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 305 RYDYRFRNRYPYAPLRKDE 323
RY YR NRYPY PL++ +
Sbjct: 475 RYPYRPPNRYPYKPLKRSK 493
>SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 344
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 166 ESRHDKEIIQRATRKDDLRTEFVRPDEQDRNFKPVYPRQA 205
ESR +K R R+ +T+ ++P QD+ + PRQA
Sbjct: 187 ESRKNKRQAARPKRQATCKTKTIKPQPQDQGKQAARPRQA 226
>SB_23357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 123 PYPNREDSHRDDILTPPQPSGELINSRMPRVNFVTQNRGI---EASESRHDKEIIQRATR 179
P N +D + P +PS S PR+ FV+ +RG+ + S HD T
Sbjct: 25 PLTNTQDVATNVSNKPAKPSNV---SHTPRIPFVSYHRGLGSGKPSPDLHDTRSGHLCTP 81
Query: 180 KDDLRTEFVR 189
+LR +FVR
Sbjct: 82 LKELRKKFVR 91
>SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1816
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 55 IQADRQQNVNQPTPWLPGPLLPEEDPTTKISLTNEVKDVFPS 96
I D +VN P+P +P P+ P P + S++ ++ P+
Sbjct: 432 INNDNVPSVNTPSPVVPPPVAPTSSPQSASSMSQNPTNIDPT 473
>SB_43373| Best HMM Match : Herpes_UL3 (HMM E-Value=2.7)
Length = 273
Score = 29.5 bits (63), Expect = 5.4
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 312 NRYPYAPLRK-DERNFRDLAPAGTDHREKKV-----DEKVTPAAVLPQKEDKPKSNQDNR 365
NR +P+ +E + D P G DH E + D P+ +P+ D ++ D
Sbjct: 60 NRVNISPVHPPEEPSPDDQLPTGGDHPETEFEAPASDTAPPPSGEIPEVHDDNSNDDDYS 119
Query: 366 N-VNRNVI--------NSHQYHDSADSYSKPTHKTFQDVVRPAEG 401
N N N + NSH DS +YS PAEG
Sbjct: 120 NDTNSNFVDNDDNDSSNSHSGDDSGSNYSNTCDFEESSNGTPAEG 164
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 29.5 bits (63), Expect = 5.4
Identities = 19/70 (27%), Positives = 28/70 (40%)
Query: 33 DNADSETARDRRGVIEEEKFYNIQADRQQNVNQPTPWLPGPLLPEEDPTTKISLTNEVKD 92
D A+ RD RG + N QA+ Q+++QP + E+ L N +D
Sbjct: 922 DRAEKHVGRDERGGKPDLHVNNRQAESMQSLSQPPTRSSQQHMAEQRQKVLTELLNTERD 981
Query: 93 VFPSYQTTEK 102
QT K
Sbjct: 982 YIRDLQTCLK 991
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 145 LINSRMPRVNFVTQNRGIEASES--RHDKEIIQRATRKDDLRTEFVR 189
+I S++ N T G+E SE +HD +++R K+ L EF++
Sbjct: 1304 VIGSQLYGANSCTYLHGVEDSEKILKHDSFVVERQEAKEPLVEEFLK 1350
>SB_948| Best HMM Match : Sec62 (HMM E-Value=9.5)
Length = 306
Score = 29.1 bits (62), Expect = 7.1
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Query: 97 YQTTEKATDRPTGRGARASNENWVKLPYPNREDSHRDDILTPPQPSGELINSRMPRVNFV 156
Y +K+ P R + EN P E++ +T P P E+I+ +P N+V
Sbjct: 192 YDLEKKSRKPPEKDPERFTYENPEYCDIPELENNREG--VTKPAPLYEIISPSLPTKNYV 249
Query: 157 TQNRGIEASESRHDKEIIQRATRKDDLRTEFVRPDEQDRNFKPVYPRQA 205
+EA H E ++ A T V +EQ KP + +A
Sbjct: 250 VPREVLEA--KNHTYEELKAAKPIYQTLTPGVSQEEQQN--KPSFQAKA 294
>SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1772
Score = 28.7 bits (61), Expect = 9.4
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
Query: 32 EDNADSETARDRRGVIEEEK-------FYNIQADRQQNVNQP----TPWLPGPLLPEEDP 80
E NA + R+R EEE Y + + +V Q T +P +P
Sbjct: 1648 ETNAADRSGRERSTGWEEESAPSMANPMYELHSPNVTSVTQQSGHTTKRIPPDTNSSINP 1707
Query: 81 TTKISLTNEVKDVFPSYQTTEKATDRPTGRGARASNENWVKLPYPNREDSHRDDIL 136
+ SLT KDV + R RG+ A+ ++W + P E+ ++++++
Sbjct: 1708 ALEESLTEACKDVITKRTGASVTSSR---RGSWANRKSWDGVRSPEEEEENQENLI 1760
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 28.7 bits (61), Expect = 9.4
Identities = 32/141 (22%), Positives = 48/141 (34%), Gaps = 15/141 (10%)
Query: 14 LMTGVSSLELPHDFNKKTEDNADSETARDRRGVIEEEKFYNIQADRQQNVNQPTPWLPGP 73
L + S + HD K ED A + + ++ D + N P
Sbjct: 459 LQGALESFQQAHDLAKILEDEAAENAVSKAIRDVNDRIAQGVKTDENSDENGEAETKPDE 518
Query: 74 LLPEEDPTTKISLTNEVKDVFPSYQTTEKATDRPTGRGARASNENWVKLPYPNREDSHRD 133
+P E + E KD TE+A D A E + P P +E+ H+
Sbjct: 519 TVPSEQEDSSAVEPTEAKD----EDDTEEAND--------AGKETATEDP-PKKEEDHQP 565
Query: 134 DILTP--PQPSGELINSRMPR 152
P QPS E + P+
Sbjct: 566 SGEQPSDEQPSDEQPSDEQPK 586
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,058,112
Number of Sequences: 59808
Number of extensions: 676943
Number of successful extensions: 1353
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1345
Number of HSP's gapped (non-prelim): 19
length of query: 422
length of database: 16,821,457
effective HSP length: 84
effective length of query: 338
effective length of database: 11,797,585
effective search space: 3987583730
effective search space used: 3987583730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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