Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001405-TA|BGIBMGA001405-PA|undefined
(324 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13980.1 68416.m01765 expressed protein 36 0.028
At3g28770.1 68416.m03591 expressed protein 33 0.26
At3g17160.1 68416.m02189 expressed protein 33 0.34
At5g63740.1 68418.m08000 zinc finger protein-related 31 0.79
At5g50310.1 68418.m06229 kelch repeat-containing protein similar... 31 1.4
At5g27590.1 68418.m03304 hypothetical protein 31 1.4
At5g44313.1 68418.m05425 hypothetical protein 30 1.8
At5g06420.2 68418.m00719 zinc finger (CCCH-type/C3HC4-type RING ... 30 1.8
At5g06420.1 68418.m00718 zinc finger (CCCH-type/C3HC4-type RING ... 30 1.8
At3g29000.1 68416.m03624 calcium-binding EF hand family protein ... 30 1.8
At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator... 30 1.8
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 30 2.4
At3g45830.1 68416.m04960 expressed protein 30 2.4
At1g77030.1 68414.m08970 glycine-rich protein 30 2.4
At1g55400.1 68414.m06336 hypothetical protein 29 3.2
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 29 3.2
At5g54260.1 68418.m06759 DNA repair and meiosis protein (Mre11) ... 29 4.2
At5g10510.1 68418.m01217 ovule development protein, putative sim... 29 4.2
At2g41880.1 68415.m05179 guanylate kinase 1 (GK-1) identical to ... 29 5.6
At1g47970.1 68414.m05343 expressed protein 29 5.6
At5g22840.1 68418.m02670 protein kinase family protein contains ... 28 7.4
At5g05740.2 68418.m00632 peptidase M50 family protein / sterol-r... 28 7.4
At5g05740.1 68418.m00631 peptidase M50 family protein / sterol-r... 28 7.4
At5g03950.1 68418.m00375 hypothetical protein 28 7.4
At5g02850.1 68418.m00228 hydroxyproline-rich glycoprotein family... 28 7.4
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 28 7.4
At3g18390.1 68416.m02339 expressed protein contains Pfam domain,... 28 7.4
At2g31210.1 68415.m03811 basic helix-loop-helix (bHLH) family pr... 28 7.4
At1g75150.1 68414.m08729 expressed protein ; expression supporte... 28 7.4
At1g55600.1 68414.m06364 WRKY family transcription factor simila... 28 7.4
At5g40110.1 68418.m04865 hypothetical protein 28 9.7
At3g49410.1 68416.m05401 transcription factor-related contains w... 28 9.7
At3g28320.1 68416.m03538 hypothetical protein similar to At14a (... 28 9.7
At1g49920.1 68414.m05598 zinc finger protein-related weak simila... 28 9.7
At1g04500.1 68414.m00441 zinc finger CONSTANS-related similar to... 28 9.7
>At3g13980.1 68416.m01765 expressed protein
Length = 357
Score = 36.3 bits (80), Expect = 0.028
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 249 SAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVM---KNLKRVYDNLNNVRDTEGSKVNND 305
S+F++P NN +++++ N+ + V+ K+L R Y N N V T + V D
Sbjct: 249 SSFTMPYAYNN---ERLYDNNEAKRVEEHRRVIQAAKDLLRTYHNKNKVTTTNINNVEED 305
Query: 306 DEDRDEKLESSDV 318
DED SSD+
Sbjct: 306 DEDDAASCASSDL 318
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 279 YVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSD 317
YV LK+ DN +E SK+ +++D EK ES D
Sbjct: 966 YVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESED 1004
>At3g17160.1 68416.m02189 expressed protein
Length = 165
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 276 GTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDV 322
GT Y+++ + V D ++ D + + D+E+ DE++E DV++D+
Sbjct: 84 GTEYLVRPVGEVEDE-DDASDFDPEENGLDEEEGDEEIEEDDVDEDI 129
>At5g63740.1 68418.m08000 zinc finger protein-related
Length = 226
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 286 RVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+VYD+ NN + +G + DED DE ++ + ED+
Sbjct: 50 KVYDDHNNDGEGDGDGDGDGDEDEDEDADADEDEDE 85
>At5g50310.1 68418.m06229 kelch repeat-containing protein similar to
Kelch repeats protein 3 (SP:Q08979) [Saccharomyces
cerevisiae]; contains Pfam PF01344: Kelch motif (6
repeats)
Length = 666
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 296 DTEGSKVNNDDEDRDEKLESSDVEDDV 322
+ EG+ +DDED DE++E+ DV+ V
Sbjct: 514 EDEGNSEESDDEDDDEEVEAMDVDGSV 540
>At5g27590.1 68418.m03304 hypothetical protein
Length = 320
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 296 DTEGSKVNNDDEDRDEKLESSDVEDDVID 324
D E +V+N DE+ + E DVEDD D
Sbjct: 126 DAESDRVSNVDENNEAVYEQDDVEDDKTD 154
>At5g44313.1 68418.m05425 hypothetical protein
Length = 237
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Query: 283 NLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDVID 324
N+ R +D+ D E +V+N DE+ + E DVEDD D
Sbjct: 81 NVSRAHDD-----DAESDRVSNVDENNEAVDEQDDVEDDKTD 117
>At5g06420.2 68418.m00719 zinc finger (CCCH-type/C3HC4-type RING
finger) family protein contains Pfam domains PF00642:
Zinc finger C-x8-C-x5-C-x3-H type (and similar) and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 378
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/99 (21%), Positives = 41/99 (41%)
Query: 222 VAPDNVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVM 281
V +N+ S + +KR SA + S+ G D + N + G N +
Sbjct: 5 VVKENIVASASSPMKKRRIDHTESADGSAINASNSSSIGGNDTVMNMAEFGNDNSNNQES 64
Query: 282 KNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVED 320
+ + + ++ ++ D+ED D K ESS +++
Sbjct: 65 QQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQN 103
>At5g06420.1 68418.m00718 zinc finger (CCCH-type/C3HC4-type RING
finger) family protein contains Pfam domains PF00642:
Zinc finger C-x8-C-x5-C-x3-H type (and similar) and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 378
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/99 (21%), Positives = 41/99 (41%)
Query: 222 VAPDNVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVM 281
V +N+ S + +KR SA + S+ G D + N + G N +
Sbjct: 5 VVKENIVASASSPMKKRRIDHTESADGSAINASNSSSIGGNDTVMNMAEFGNDNSNNQES 64
Query: 282 KNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVED 320
+ + + ++ ++ D+ED D K ESS +++
Sbjct: 65 QQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQN 103
>At3g29000.1 68416.m03624 calcium-binding EF hand family protein
similar to calmodulin-like MSS3 GI:9965747 from
[Arabidopsis thaliana]; contains INTERPRO:IPR002048
calcium-binding EF-hand domain
Length = 194
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/43 (27%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 280 VMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDV 322
++++ +RV+D NN +D + + +D+D D+ + D +DD+
Sbjct: 40 LLQHHQRVFDKKNN-KDQQETLTKQEDDDDDDDDDDDDDDDDI 81
>At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator of
chromosome condensation (RCC1) family protein identical
to zinc finger protein PRAF1 [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.
Length = 1103
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 266 FNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLE 314
F++ + G+ ++ +N ++VY+ N VR +E S + DRDE+ E
Sbjct: 1052 FSRRRFGEHQAETWWSENREKVYEKYN-VRVSEKSTASQTHRDRDEEEE 1099
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 274 ANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
++G V +N K+V +++ +++D SK+ N D D K S+D E +
Sbjct: 131 SDGVGVVEEN-KKVKEDVEDIKDDGESKIENGSVDVDVKQASTDGESE 177
>At3g45830.1 68416.m04960 expressed protein
Length = 1298
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 240 GRDFGRRHLSAFSVPVRSNNGTPDKI-FNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTE 298
G +F RR L+A + + K F + +G T Y + Y+ + VR
Sbjct: 270 GLEFPRRQLAAVEQDLYGKPKSKPKFPFAKTSVGPY-ATGYNGYGMNSAYNPSSLVRQRY 328
Query: 299 GSKVNNDDEDRD 310
GS+ N DD+D+D
Sbjct: 329 GSEDNIDDDDQD 340
>At1g77030.1 68414.m08970 glycine-rich protein
Length = 349
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 220 KRVAPDNVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSY 279
K+V+ D+ D +T R GRD RR S + VRS D++ + + KAN SY
Sbjct: 141 KKVSRDSGDADETTRMSGRGGRDGKRRQGSVPNAHVRSEIKDLDQV-RKERQQKANKVSY 199
Query: 280 V 280
+
Sbjct: 200 L 200
>At1g55400.1 68414.m06336 hypothetical protein
Length = 211
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 296 DTEGSKVNNDDEDRDEKLESSDVEDDVID 324
D E +V+N DE+ + E DVEDD D
Sbjct: 100 DAESDRVSNVDENNEAVDEQDDVEDDKTD 128
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 281 MKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+K +R D N + +GS+ + + R ++++SSD EDD
Sbjct: 22 LKKSRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDSEDD 62
>At5g54260.1 68418.m06759 DNA repair and meiosis protein (Mre11)
identical to DNA repair and meiosis protein (Mre11)
GI:5524769 from [Arabidopsis thaliana]
Length = 720
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 222 VAPDNVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVM 281
+ D+VD +++ E DF + S+ G + G+ +GTS
Sbjct: 617 IGEDDVDSPSSEEVEPE---DFNKPDSSSEDDESTKGKGRKRPATTKRGRGRGSGTSKRG 673
Query: 282 KNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
+ +LN + ++ + DDEDR++KL S
Sbjct: 674 RK-NESSSSLNRLLSSKDDDEDEDDEDREKKLNKS 707
>At5g10510.1 68418.m01217 ovule development protein, putative
similar to ovule development protein aintegumenta
(GI:1209099) [Arabidopsis thaliana]
Length = 566
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 217 YDRKRVAPDNVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANG 276
+D K +A S E GR HL+ + + P+ F+ G +
Sbjct: 125 HDFKTMAGFQSAFSTNSGSEVDDSASIGRTHLAGDYLGHVVESSGPELGFHGGSTGALSL 184
Query: 277 TSYVMKNLKRVYDNLNNVR-DTEGSKVNNDDEDRDEKLES 315
V N DN N+ R + G ++NN++ + +EK +S
Sbjct: 185 GVNVNNNTNHRNDNDNHYRGNNNGERINNNNNNDNEKTDS 224
>At2g41880.1 68415.m05179 guanylate kinase 1 (GK-1) identical to
guanylate kinase (GK-1) [Arabidopsis thaliana]
gi|7861795|gb|AAF70408
Length = 387
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 214 GHIYDRKRVAP--DNVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKI 271
G I K+ +P D++ + D P R + R+ + A+S VR N P I + +
Sbjct: 89 GRILVIKKGSPRNDSIWFLEVDSPYVREQKKLLRKEVVAWSKGVRGNAEKPIVISGPSGV 148
Query: 272 GKANGTSYVMKNLKRVY 288
GK S +MK ++
Sbjct: 149 GKGTLISMLMKEFPSMF 165
>At1g47970.1 68414.m05343 expressed protein
Length = 198
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 282 KNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDV 322
+ +K V + +++ D +GS+ DD+D +E+ E D +DDV
Sbjct: 29 EQVKDVGEEVSDEDDDDGSE--GDDDDDEEEEEDDDDDDDV 67
>At5g22840.1 68418.m02670 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 538
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 222 VAPDNVDVSQTDDPE---KRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTS 278
+ P+N+ + T DPE ++ G + +VP R K + + N
Sbjct: 177 IKPENILLCSTIDPEADARKSGIPLVLPTVKDKAVPERPVEKEKPKSYTYSADLTKNQKK 236
Query: 279 YVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
+ K K+V + N RD+ S+ + E+LE S
Sbjct: 237 KIRKKAKKVEGSEENERDSSNSEARPNGNATVERLEES 274
>At5g05740.2 68418.m00632 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains Pfam PF02163:
Sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 527
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Query: 276 GTSYVMKNLK--RVY---DNLNNVRDTEGSKVNNDDEDRDEKLESS 316
GTS K+LK RV+ + L V +T+ NDDED E ESS
Sbjct: 42 GTSRRKKDLKLERVFRKRETLVRVTETQTEPEGNDDEDNKEGKESS 87
>At5g05740.1 68418.m00631 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains Pfam PF02163:
Sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 556
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Query: 276 GTSYVMKNLK--RVY---DNLNNVRDTEGSKVNNDDEDRDEKLESS 316
GTS K+LK RV+ + L V +T+ NDDED E ESS
Sbjct: 42 GTSRRKKDLKLERVFRKRETLVRVTETQTEPEGNDDEDNKEGKESS 87
>At5g03950.1 68418.m00375 hypothetical protein
Length = 252
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 286 RVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
RV D+++NV D V+ D+D D+K + E D
Sbjct: 105 RVCDSVSNV-DENNEAVDEQDDDEDDKTNEDEEEGD 139
>At5g02850.1 68418.m00228 hydroxyproline-rich glycoprotein family
protein
Length = 426
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 274 ANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
AN + L + D+ ++ R + SK+ DDED D + SS
Sbjct: 190 ANKLKDAERVLDMLVDDYSDYRKPKRSKIEEDDEDNDNESSSS 232
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 292 NNVRDTEGSKVNNDDEDRDEKLESSDVEDDVI 323
NN++ +K + D+D DEK E+S E +
Sbjct: 291 NNIKKQTDTKTESSDDDDDEKEENSKTEKKTV 322
>At3g18390.1 68416.m02339 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 848
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 297 TEGSKVNNDDEDRDEKLESSDVEDDVID 324
+E N++D+D DE+ E DVED+ D
Sbjct: 800 SESEWENDEDDDDDEEEEKDDVEDNESD 827
>At2g31210.1 68415.m03811 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain; PMID: 12679534
Length = 428
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 287 VYDNLNNVR-DTEGSKVNNDDEDRDEKLESSDVEDDVID 324
V DN NN D G N DD+D DE +E E DVID
Sbjct: 284 VDDNNNNKNLDDHG---NEDDDDDDENMEKKP-ESDVID 318
>At1g75150.1 68414.m08729 expressed protein ; expression supported
by MPSS
Length = 753
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 274 ANGTSYVMKNLKR-VYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVE 319
A GT +++ LKR V + + + E V++DDE+R E + +V+
Sbjct: 472 AAGTEKLLQKLKRGVQHDETLLSEDEDDDVDDDDEERPEGADGEEVQ 518
>At1g55600.1 68414.m06364 WRKY family transcription factor similar
to SPF1 protein GI:484261 from [Ipomoea batatas];
contains Pfam profile: PF03106 WRKY DNA -binding domain
Length = 485
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 271 IGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSD 317
IG TS+ + + + ++ ++ D+E N DD+D D + E D
Sbjct: 194 IGTPLVTSFESELVDDAHTDIISIEDSESEDGNKDDDDEDFQYEDED 240
>At5g40110.1 68418.m04865 hypothetical protein
Length = 280
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 286 RVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
RV D+++NV D V+ D+D D+K + E D
Sbjct: 105 RVCDSVSNV-DENNEAVDEKDDDEDDKTNEDEEEGD 139
>At3g49410.1 68416.m05401 transcription factor-related contains weak
similarity to transcription factor IIIC63 (GI:5281316)
[Homo sapiens]
Length = 559
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 281 MKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLE 314
M+ K V +N++ + +G N DDED DE+ E
Sbjct: 440 METFKSVNENVDANVNEDGEDENLDDEDEDEEEE 473
>At3g28320.1 68416.m03538 hypothetical protein similar to At14a
(GI:11994571 and GI:11994573) [Arabidopsis thaliana]
Length = 280
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 262 PDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
P++I + K G V + + + D ++++ T + ++ ++ D KL+ +EDD
Sbjct: 185 PERITEGMEADK-EGMKSVPEQVDELKDQISSLLQTVDDAIGSEGDEVDVKLDMESLEDD 243
Query: 322 V 322
V
Sbjct: 244 V 244
>At1g49920.1 68414.m05598 zinc finger protein-related weak
similarity to mudrA [Zea mays] GI:540581, MURAZC [Zea
mays] GI:1857256; contains Pfam profiles PF03108: MuDR
family transposase, PF04434: SWIM zinc finger
Length = 785
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 295 RDTEGSKVNNDDE-DRDEKLESSDVEDDVID 324
+DTE + D++ D DE+ E DV+DD D
Sbjct: 743 KDTEDDHLEEDEDGDDDEEEEDDDVDDDEED 773
>At1g04500.1 68414.m00441 zinc finger CONSTANS-related similar to
Zinc finger protein constans-like 15 (SP:Q9FHH8)
{Arabidopsis thaliana}
Length = 386
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 266 FNQNK--IGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDVI 323
FNQ +NG YV N N NN D S N D ED ++ + S + D
Sbjct: 38 FNQTSEVTSASNGCGYVENN------NTNNFPDKSNSGSNQDHEDNNDNADLSIIFDSQD 91
Query: 324 D 324
D
Sbjct: 92 D 92
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.132 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,980,285
Number of Sequences: 28952
Number of extensions: 269959
Number of successful extensions: 1099
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1038
Number of HSP's gapped (non-prelim): 76
length of query: 324
length of database: 12,070,560
effective HSP length: 81
effective length of query: 243
effective length of database: 9,725,448
effective search space: 2363283864
effective search space used: 2363283864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)
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