Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001403-TA|BGIBMGA001403-PA|undefined
         (701 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   7.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   7.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   9.4  

>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 8/20 (40%), Positives = 16/20 (80%)

Query: 648  IDDNESKRNQDAMDIKKLKD 667
            ID+N+ ++ + A D+K+L+D
Sbjct: 1247 IDENKEEKARIAADLKELRD 1266


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 8/20 (40%), Positives = 16/20 (80%)

Query: 648  IDDNESKRNQDAMDIKKLKD 667
            ID+N+ ++ + A D+K+L+D
Sbjct: 1247 IDENKEEKARIAADLKELRD 1266


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 368 RKDNHTDLVKMALSEADRDSIMRRFVDELEDWKEKQQ 404
           ++DN T +    L E+     +R+F  E+   K  +Q
Sbjct: 473 KEDNKTQVAVKMLKESPTSEEIRQFTQEINIMKSVRQ 509


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.133    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,387
Number of Sequences: 317
Number of extensions: 4906
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 3
length of query: 701
length of database: 114,650
effective HSP length: 62
effective length of query: 639
effective length of database: 94,996
effective search space: 60702444
effective search space used: 60702444
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)