Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001401-TA|BGIBMGA001401-PA|IPR003000|Silent information
regulator protein Sir2
(370 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g55760.1 68418.m06950 transcriptional regulator Sir2 family p... 256 2e-68
At5g09230.5 68418.m01052 transcriptional regulator Sir2 family p... 50 2e-06
At5g09230.3 68418.m01049 transcriptional regulator Sir2 family p... 50 2e-06
At5g09230.2 68418.m01051 transcriptional regulator Sir2 family p... 50 2e-06
At5g09230.1 68418.m01050 transcriptional regulator Sir2 family p... 50 2e-06
At5g09230.6 68418.m01054 transcriptional regulator Sir2 family p... 42 7e-04
At5g09230.4 68418.m01053 transcriptional regulator Sir2 family p... 42 7e-04
At5g48690.1 68418.m06025 hypothetical protein 34 0.17
At3g55340.1 68416.m06146 RNA recognition motif (RRM)-containing ... 33 0.40
At3g48970.1 68416.m05349 copper-binding family protein similar t... 30 2.8
At4g14020.1 68417.m02167 rapid alkalinization factor (RALF) fami... 29 3.8
At3g55960.1 68416.m06218 NLI interacting factor (NIF) family pro... 29 3.8
At2g46070.1 68415.m05731 mitogen-activated protein kinase, putat... 29 3.8
At3g28770.1 68416.m03591 expressed protein 29 5.0
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 29 6.6
At1g42580.1 68414.m04910 hypothetical protein contains similarit... 29 6.6
At5g05440.1 68418.m00586 expressed protein low similarity to cyt... 28 8.7
>At5g55760.1 68418.m06950 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family
Length = 473
Score = 256 bits (626), Expect = 2e-68
Identities = 131/276 (47%), Positives = 178/276 (64%), Gaps = 6/276 (2%)
Query: 1 MSCNYAEGLSPYENKGILGVPEKFDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAG 60
MS YAE LS E+ G +G+ E FD + L K LA+L++ SKH+VV TGAGISTS G
Sbjct: 1 MSLGYAEKLSFIEDVGQVGMAEFFDPSHLLQCKIEELAKLIQKSKHLVVFTGAGISTSCG 60
Query: 61 IPDFRGPNGVWTLEKEGKK-PTINVSFADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLH 119
IPDFRGP G+WTL++EGK P ++ F A P+ THM +SQN+DGLH
Sbjct: 61 IPDFRGPKGIWTLQREGKDLPKASLPFHRAMPSMTHMALVELERAGILKFVISQNVDGLH 120
Query: 120 LKSGVPRKFLAELHGNMFIDECNICKRQFVRSSPVETVGKKCSGVPCAAHHVTGRPCRGR 179
L+SG+PR+ L+ELHG+ F++ C C +++R VET+G K + C+ C +
Sbjct: 121 LRSGIPREKLSELHGDSFMEMCPSCGAEYLRDFEVETIGLKETSRKCSVEK-----CGAK 175
Query: 180 LYDGVLDWEHSLPENDLLMAEWHSSIADLSICLGTTLQIVPSGNLPLETIKYGGKLVICN 239
L D VLDWE +LP ++ AE H ADL +CLGT+LQI P+ NLPL+ +K GGK+VI N
Sbjct: 176 LKDTVLDWEDALPPKEIDPAEKHCKKADLVLCLGTSLQITPACNLPLKCLKGGGKIVIVN 235
Query: 240 LQPTKHDNKADLLINYYVDDVLEKVMDILGIEIPSY 275
LQ T D KA+++I+ VD V+ VM+ L ++IP Y
Sbjct: 236 LQKTPKDKKANVVIHGLVDKVVAGVMESLNMKIPPY 271
>At5g09230.5 68418.m01052 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 354
Score = 50.4 bits (115), Expect = 2e-06
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 27/135 (20%)
Query: 37 LAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTINVS----------- 85
L +L + S + + TGAG+ST GIPD+R PNG ++ G KP +
Sbjct: 66 LYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGAYS---SGFKPITHQEFTRSSRARRRY 122
Query: 86 ----------FADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSGVPRKFLAELHGN 135
F AQP H ++QN+D LH ++G ELHG
Sbjct: 123 WARSYAGWRRFTAAQPGPAHTALASLEKAGRINFMITQNVDRLHHRAGSDP---LELHGT 179
Query: 136 MFIDECNICKRQFVR 150
++ C C F R
Sbjct: 180 VYTVMCLECGFSFPR 194
Score = 41.9 bits (94), Expect = 7e-04
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 176 CRGRLYDGVLDWEHSLPENDLLMAEWHSSIADLSICLGTTLQIVPSGNLPLETIKYGGKL 235
C+G L V+ + ++P+ A + +D + LG++L + + L + G
Sbjct: 255 CKGVLKPDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAFRLCRAAHEAGAMT 314
Query: 236 VICNLQPTKHDNKADLLINYYVDDVLEKVMDILGIEIPS 274
I N+ T+ D+ L IN V ++L +V+D+ + +P+
Sbjct: 315 AIVNIGETRADDIVPLKINARVGEILHRVLDVGSLSVPA 353
>At5g09230.3 68418.m01049 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 324
Score = 50.4 bits (115), Expect = 2e-06
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 27/135 (20%)
Query: 37 LAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTINVS----------- 85
L +L + S + + TGAG+ST GIPD+R PNG ++ G KP +
Sbjct: 85 LYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGAYS---SGFKPITHQEFTRSSRARRRY 141
Query: 86 ----------FADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSGVPRKFLAELHGN 135
F AQP H ++QN+D LH ++G ELHG
Sbjct: 142 WARSYAGWRRFTAAQPGPAHTALASLEKAGRINFMITQNVDRLHHRAGSDP---LELHGT 198
Query: 136 MFIDECNICKRQFVR 150
++ C C F R
Sbjct: 199 VYTVMCLECGFSFPR 213
>At5g09230.2 68418.m01051 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 373
Score = 50.4 bits (115), Expect = 2e-06
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 27/135 (20%)
Query: 37 LAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTINVS----------- 85
L +L + S + + TGAG+ST GIPD+R PNG ++ G KP +
Sbjct: 85 LYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGAYS---SGFKPITHQEFTRSSRARRRY 141
Query: 86 ----------FADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSGVPRKFLAELHGN 135
F AQP H ++QN+D LH ++G ELHG
Sbjct: 142 WARSYAGWRRFTAAQPGPAHTALASLEKAGRINFMITQNVDRLHHRAGSDP---LELHGT 198
Query: 136 MFIDECNICKRQFVR 150
++ C C F R
Sbjct: 199 VYTVMCLECGFSFPR 213
Score = 41.9 bits (94), Expect = 7e-04
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 176 CRGRLYDGVLDWEHSLPENDLLMAEWHSSIADLSICLGTTLQIVPSGNLPLETIKYGGKL 235
C+G L V+ + ++P+ A + +D + LG++L + + L + G
Sbjct: 274 CKGVLKPDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAFRLCRAAHEAGAMT 333
Query: 236 VICNLQPTKHDNKADLLINYYVDDVLEKVMDILGIEIPS 274
I N+ T+ D+ L IN V ++L +V+D+ + +P+
Sbjct: 334 AIVNIGETRADDIVPLKINARVGEILHRVLDVGSLSVPA 372
>At5g09230.1 68418.m01050 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 373
Score = 50.4 bits (115), Expect = 2e-06
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 27/135 (20%)
Query: 37 LAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTINVS----------- 85
L +L + S + + TGAG+ST GIPD+R PNG ++ G KP +
Sbjct: 85 LYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGAYS---SGFKPITHQEFTRSSRARRRY 141
Query: 86 ----------FADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSGVPRKFLAELHGN 135
F AQP H ++QN+D LH ++G ELHG
Sbjct: 142 WARSYAGWRRFTAAQPGPAHTALASLEKAGRINFMITQNVDRLHHRAGSDP---LELHGT 198
Query: 136 MFIDECNICKRQFVR 150
++ C C F R
Sbjct: 199 VYTVMCLECGFSFPR 213
Score = 41.9 bits (94), Expect = 7e-04
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 176 CRGRLYDGVLDWEHSLPENDLLMAEWHSSIADLSICLGTTLQIVPSGNLPLETIKYGGKL 235
C+G L V+ + ++P+ A + +D + LG++L + + L + G
Sbjct: 274 CKGVLKPDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAFRLCRAAHEAGAMT 333
Query: 236 VICNLQPTKHDNKADLLINYYVDDVLEKVMDILGIEIPS 274
I N+ T+ D+ L IN V ++L +V+D+ + +P+
Sbjct: 334 AIVNIGETRADDIVPLKINARVGEILHRVLDVGSLSVPA 372
>At5g09230.6 68418.m01054 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 271
Score = 41.9 bits (94), Expect = 7e-04
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 176 CRGRLYDGVLDWEHSLPENDLLMAEWHSSIADLSICLGTTLQIVPSGNLPLETIKYGGKL 235
C+G L V+ + ++P+ A + +D + LG++L + + L + G
Sbjct: 172 CKGVLKPDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAFRLCRAAHEAGAMT 231
Query: 236 VICNLQPTKHDNKADLLINYYVDDVLEKVMDILGIEIPS 274
I N+ T+ D+ L IN V ++L +V+D+ + +P+
Sbjct: 232 AIVNIGETRADDIVPLKINARVGEILHRVLDVGSLSVPA 270
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 86 FADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSGVPRKFLAELHGNMFIDECNICK 145
F AQP H ++QN+D LH ++G ELHG ++ C C
Sbjct: 50 FTAAQPGPAHTALASLEKAGRINFMITQNVDRLHHRAGSDP---LELHGTVYTVMCLECG 106
Query: 146 RQFVR 150
F R
Sbjct: 107 FSFPR 111
>At5g09230.4 68418.m01053 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 271
Score = 41.9 bits (94), Expect = 7e-04
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 176 CRGRLYDGVLDWEHSLPENDLLMAEWHSSIADLSICLGTTLQIVPSGNLPLETIKYGGKL 235
C+G L V+ + ++P+ A + +D + LG++L + + L + G
Sbjct: 172 CKGVLKPDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAFRLCRAAHEAGAMT 231
Query: 236 VICNLQPTKHDNKADLLINYYVDDVLEKVMDILGIEIPS 274
I N+ T+ D+ L IN V ++L +V+D+ + +P+
Sbjct: 232 AIVNIGETRADDIVPLKINARVGEILHRVLDVGSLSVPA 270
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 86 FADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSGVPRKFLAELHGNMFIDECNICK 145
F AQP H ++QN+D LH ++G ELHG ++ C C
Sbjct: 50 FTAAQPGPAHTALASLEKAGRINFMITQNVDRLHHRAGSDP---LELHGTVYTVMCLECG 106
Query: 146 RQFVR 150
F R
Sbjct: 107 FSFPR 111
>At5g48690.1 68418.m06025 hypothetical protein
Length = 301
Score = 33.9 bits (74), Expect = 0.17
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 286 ETAIIDWSIDRKDVLALEKTFKSKCKGVKKKRILIKTKRFTSNANDIEKSKMIKLEVKEE 345
ET I +RK +AL K K + K ++K I++K NA+ +E+ + + L + E
Sbjct: 100 ETKRIAEENERKRNIALRKAEKDEEKKAREK-IMLKV-----NADKLERKRRLGLPTETE 153
Query: 346 NETKDWPLKPSDQEFIIDQKGSIVS 370
+ + P+ P D + I+ S+VS
Sbjct: 154 SASTSNPVSPLDPKRIVMSSPSVVS 178
>At3g55340.1 68416.m06146 RNA recognition motif (RRM)-containing
protein low similarity to nucleolar phosphoprotein
(Nopp52), Tetrahymena thermophila, EMBL:TT51555;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 597
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 303 EKTFKSKCKGVKKKRILIKTKRFTSNANDIEKSKMIKLEVKEENETKD 350
+K K K K KKKR + KT + N EK K+ ++EV +N+ +D
Sbjct: 109 QKPQKKKNKKKKKKRKVNKTPKKAEEGNVEEKVKVEEIEVNTDNKEED 156
>At3g48970.1 68416.m05349 copper-binding family protein similar to
copper homeostasis factor gi:3168840 from Arabidopsis
thaliana; contains Pfam heavy-metal-associated domain
PF00403
Length = 140
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 302 LEKTFKSKCKGVKKKRILIKTKRFTSNANDIEKSKMIKLEVKEENETKDWPLKPSDQEF 360
L KT K KGV++ + ++T++ T+ +E+ K++K + + WP + + F
Sbjct: 21 LRKTLL-KLKGVEEVEVEMETQKVTARGYRLEEKKVLKAVRRAGKAAELWPYRLGNSHF 78
>At4g14020.1 68417.m02167 rapid alkalinization factor (RALF) family
protein
Length = 111
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 323 KRFTSNANDIEKSKMIKLEVKEENETKDWPLKPSDQEFIIDQK 365
+R+ S+ D E +K+I +KE+ ETKD PS + ++ K
Sbjct: 27 ERYESDEEDGEVNKLI---LKEDEETKDMVTSPSGERMMLTSK 66
>At3g55960.1 68416.m06218 NLI interacting factor (NIF) family
protein contains Pfam profile PF03031: NLI interacting
factor
Length = 305
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 142 NICKRQFVRSSPVETVGKKCSGVPCAAHHVTGRPCRGRLYDGVLDWEHSLPEND 195
N+C+ V ++P + + +G+PC A G+P +L D +L L E D
Sbjct: 225 NMCRTVIVDNNPFSFLLQPSNGIPCIAFS-AGQPNDTQLLDVILPLLKQLSEED 277
>At2g46070.1 68415.m05731 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK12) mitogen-activated protein
kinase (MAPK)(AtMPK12), PMID:12119167
Length = 372
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 153 PVETVGKKCSGVPCAA-HHVTGRPCR----GRLYDGVLDWEHSLPENDLLMAEWHSSI 205
P+ +G+ G+ CAA + VTG G +D ++D + +L E LL H ++
Sbjct: 43 PIRPIGRGACGIVCAAVNSVTGEKVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENV 100
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 277 ESENPMKFAETAIIDWSIDRKDVLALEKTFKSKCKGVKKKRILIKTKRFTSNANDIEKSK 336
+ EN K +ET I+ S +K+ + ++ SK + KK++ + +++ N+ ++ K
Sbjct: 1156 KKENEEK-SETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKK 1214
Query: 337 MIKLEV-KEENETKDWPLKPSDQE 359
+E K++ ETK KP D +
Sbjct: 1215 QTSVEENKKQKETKKEKNKPKDDK 1238
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/58 (22%), Positives = 29/58 (50%)
Query: 197 LMAEWHSSIADLSICLGTTLQIVPSGNLPLETIKYGGKLVICNLQPTKHDNKADLLIN 254
L+ + ++++ ++ GT++ ++ +G+ PL GG L C + + K L N
Sbjct: 190 LLLDLEANVSAVTFHYGTSMDMIGAGSTPLHYAACGGNLKCCQILLARGARKMTLNCN 247
>At1g42580.1 68414.m04910 hypothetical protein contains similarity
to hypothetical proteins
Length = 134
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 312 GVKKKRILIKTKRFTSNANDIEKSKMIKLEVKE--ENETKDWPLKPSDQE 359
GVK + K K+ S +E + LE++ E + KDW L+ D+E
Sbjct: 62 GVKASKA--KAKKVVSKTTTVEDKGNVMLEIQSIGEIKQKDWELRQKDRE 109
>At5g05440.1 68418.m00586 expressed protein low similarity to
cytokinin-specific binding protein [Vigna radiata]
GI:4190976
Length = 203
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 184 VLDWEHSLPENDLLMAEWHSSIADLSICLGTTLQIVPSGNLPLETIKYGGKLVICNLQ 241
V+ +H L +N + H+S + ++ + + + VP GN ET+ + +V CNLQ
Sbjct: 138 VVGGDHRL-KNYRSVTTLHASDDEGTVVVESYIVDVPPGNTEEETLSFVDTIVRCNLQ 194
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,215,418
Number of Sequences: 28952
Number of extensions: 402387
Number of successful extensions: 1001
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 979
Number of HSP's gapped (non-prelim): 29
length of query: 370
length of database: 12,070,560
effective HSP length: 82
effective length of query: 288
effective length of database: 9,696,496
effective search space: 2792590848
effective search space used: 2792590848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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