Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001027-TA|BGIBMGA001027-PA|IPR000223|Peptidase S26A,
signal peptidase I, IPR011056|Peptidase S24 and S26, C-terminal
region, IPR006198|Peptidase S24, S26A and S26B
         (153 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   2.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   4.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   4.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 6   FFGKTCGFIGY 16
           F+GK C F GY
Sbjct: 368 FYGKNCEFSGY 378


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 92  DKVRGNFPKRSQVVPRGHV 110
           D +R N   R+Q VP G +
Sbjct: 199 DSIRQNSQTRNQAVPTGTI 217


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 92  DKVRGNFPKRSQVVPRGHV 110
           D +R N   R+Q VP G +
Sbjct: 199 DSIRQNSQTRNQAVPTGTI 217


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)

Query: 114  GDNSSNSADSRIYGPVP 130
            GD S+N  DS     VP
Sbjct: 1186 GDESANETDSETVSTVP 1202


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)

Query: 114  GDNSSNSADSRIYGPVP 130
            GD S+N  DS     VP
Sbjct: 1186 GDESANETDSETVSTVP 1202


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)

Query: 114  GDNSSNSADSRIYGPVP 130
            GD S+N  DS     VP
Sbjct: 1186 GDESANETDSETVSTVP 1202


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)

Query: 114  GDNSSNSADSRIYGPVP 130
            GD S+N  DS     VP
Sbjct: 1186 GDESANETDSETVSTVP 1202


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.140    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,747
Number of Sequences: 317
Number of extensions: 1697
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 153
length of database: 114,650
effective HSP length: 52
effective length of query: 101
effective length of database: 98,166
effective search space:  9914766
effective search space used:  9914766
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)