Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001022-TA|BGIBMGA001022-PA|IPR008952|Tetraspanin,
IPR000301|CD9/CD37/CD63 antigen, IPR000437|Prokaryotic membrane
lipoprotein lipid attachment site
(190 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 45 3e-05
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 40 0.001
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.016
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 36 0.021
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 35 0.049
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 34 0.065
SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10) 33 0.15
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 31 0.46
SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13) 30 1.1
SB_20290| Best HMM Match : ig (HMM E-Value=2.9e-15) 30 1.4
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 28 5.6
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 28 5.6
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 27 7.4
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 27 9.8
SB_32924| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 46.0 bits (104), Expect = 2e-05
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 10/182 (5%)
Query: 9 YFIGIYIMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFST 68
Y G +++ I +VAFLGC A EN +L + L L + ++G L ++
Sbjct: 50 YATGPRVVIAVGFIIALVAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGG--ALAYNN 107
Query: 69 YDSSIQPLIRNVIVRLINNPQHDGSREILRMVQEGIGCCGADGPMDY-----INLNKPLP 123
D L ++++ + N P + + + +Q CCGAD D+ + + +P
Sbjct: 108 KDKIENRLDKDILKAIENYP--GKNEKSINDMQTKFKCCGADNYTDWQSNIKMKNSSSVP 165
Query: 124 SECRDSVTGNAYFHGCVDEMTWYLEGKTGWLAGIVLASCMVSIINAVMSLVLIQAVKKEE 183
C S G D Y +G + G + S + I +++++IQ + E
Sbjct: 166 DSCCKSEKAGCGVGGVKDPKDIYTKGCFTIIKGEIEKS-LKPIGGLAIAVLVIQVKDELE 224
Query: 184 DE 185
+E
Sbjct: 225 NE 226
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 9 YFIGIYIMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFST 68
+ G +++ I ++AF GC A EN +L + L L V GL A VL +
Sbjct: 403 FMSGSRLLIAVGCIITIIAFFGCCGAWKENKCMLILFF--ILLLIVLGLEIAAAVLGYIN 460
Query: 69 YDSSIQPLIRNVIVRLINNPQHDGSREILRMVQEGIGCCGADGPMDY 115
D L ++I + P++ ++ + +Q CCGA GP D+
Sbjct: 461 KDKIQSDLTDDIIRNIKEYPKN--NKAAIDAMQMDFECCGAKGPSDW 505
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 40.3 bits (90), Expect = 0.001
Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 17/199 (8%)
Query: 4 LELQKYFIGIYIMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVV 63
L+ KY G I++ I +V+F GC A+ E+ LL + + + G +
Sbjct: 317 LQSVKYITGSIIIIAVGAFIALVSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTALG 376
Query: 64 LDF-STYDSSIQPLIRNVIVRLINNPQHDGSREILRMVQEGIGCCGADGPMD-----YIN 117
+ + + + + + IV +G + +Q+ CCG +G D Y
Sbjct: 377 YVYRNKVEEQLGKDMNDTIVS-YGEKGKEGITDAYDAIQKKEKCCGINGFKDWQRSYYTK 435
Query: 118 LNKPL-PSECRDSVT---------GNAYFHGCVDEMTWYLEGKTGWLAGIVLASCMVSII 167
N + P C +V+ + Y GC D + L+ + GI + ++ I+
Sbjct: 436 GNHSIVPDSCCKTVSKGCGINFKENDIYTKGCFDTVKTLLKDNLIIIGGIGIGVAVIQIL 495
Query: 168 NAVMSLVLIQAVKKEEDEA 186
+ ++VL+ + + + A
Sbjct: 496 AMIFAMVLVCKIGAQSEYA 514
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 15 IMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYDSSIQ 74
++LI + + ++A +GC AL EN LL Y G+ +F L+ A + + + D ++
Sbjct: 84 VILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLIF-LVSAGIAV-YMHQDKVVE 141
Query: 75 PLIRNVIVRLINNPQHDGSREILRMVQEGIGCCGADGPMD-----YINLNKPLPSEC 126
L + ++ +P + + ++ +Q + CCG + D Y N + P C
Sbjct: 142 KLKDD--LKHYRDPDKENFQFLIDRLQTNLKCCGVNSYTDWQTNIYFNCSSPGSESC 196
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 15 IMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYDSSIQ 74
++ + ++ F GC AL EN L Y G + + +I A VL F + +
Sbjct: 75 LLFFTGFSLYLIVFFGCVGALKENTLFLASY-GIFIFCCLIPII-AAGVLAFLQREKLVD 132
Query: 75 PLIRNVIVRLINNPQHDGSR-EILRMVQEGIGCCGADGPMD-----YINLNKPLPSEC 126
P R + + + Q D S+ E + +Q CCG + D Y + + P+P+ C
Sbjct: 133 PKAR--LEDGLKSYQQDSSKQEFIDFIQTRFKCCGIESYKDWQANRYFSCSSPVPTAC 188
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 39.1 bits (87), Expect = 0.002
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 12/121 (9%)
Query: 15 IMLIASLGIM-VVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDF---STYD 70
++ +A G++ V+ GC AL EN LL YI + + G+I C L F +
Sbjct: 105 VIFLALGGLLFVITIFGCIGALRENRCLLTAYIW-MCGIILAGMI-VCGGLGFYYKDVLE 162
Query: 71 SSIQPLIRNVIVRLINNPQHDGSREILRMVQEGIGCCGADGPMD-----YINLNKPLPSE 125
+ + +++ IV L +P I+ VQ + CCG G D Y N + P
Sbjct: 163 TKVTAQLKDAIV-LYRDPTKGDLHLIIDTVQTELQCCGVQGLNDWDANIYFNCSGPARER 221
Query: 126 C 126
C
Sbjct: 222 C 222
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 36.3 bits (80), Expect = 0.016
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 17 LIASLGIM-VVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYDSSIQP 75
LI GIM ++ F GC AL EN+ LL + S + +F L A V F D
Sbjct: 50 LIIVGGIMFILGFSGCIGALRENICLLKFF--SVVLAIIFFLQLALGVFVFVFQDKVEAV 107
Query: 76 LIRNVIVRLINNPQHDGSREILRMVQEGIGCCGADGPMD-----YINLNKPLPSEC 126
++ + + + + ++ VQ+ CCGA G D Y N + P C
Sbjct: 108 IVEKLQTAVTKYRDNADLQNLIDGVQQEFKCCGAKGINDWDKNIYFNCSSPGSEAC 163
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 35.9 bits (79), Expect = 0.021
Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 13 IYIMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYD-- 70
+ I + + + + F GC AL EN L Y G+ + L + LI AC + ++ D
Sbjct: 78 VVIFFVIGILMFFIGFFGCVGALRENTCFLTVY-GTSVFLCLILLI-ACGAVAYTQKDKV 135
Query: 71 SSIQPLIRNVIVRLINNPQHDGSREILRMVQEGIGCCGADGPMD-----YINLNKPLPSE 125
+++ ++ + + +++P +++++ +Q + CCG + D Y N + P
Sbjct: 136 QALKERLKQDLKKYLDDPL---NQDLIDFMQTLLKCCGVESYKDWQANPYFNCSSPGRMS 192
Query: 126 C 126
C
Sbjct: 193 C 193
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 34.7 bits (76), Expect = 0.049
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 15 IMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYDSSIQ 74
++LI + + ++A +GC AL EN T+L G + L + L+ A + + D +
Sbjct: 84 VILIVGILLFLIATVGCIGALREN-TILLAIYGGAVTLCLILLVSAGTAV-YIHRDKVVA 141
Query: 75 PLIRNVIVRLINNPQHDGSREILRMVQEGIGCCGADGPMD-----YINLNKPLPSEC 126
L + ++ +P + + ++ +Q + CCG + D Y N + P C
Sbjct: 142 KLKDD--LQHYRDPDKENFQFLIDRLQTNLKCCGINSYNDWQTNVYFNCSSPGSESC 196
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 34.3 bits (75), Expect = 0.065
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 15 IMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYDSSIQ 74
+ ++ + ++VAFL C AL E+ +L Y G L +F L +VL + Y I+
Sbjct: 61 LCIVIGIVTVIVAFLACCGALKESQCMLGTYFG--LVTAIFCLEVTAIVLAY-VYRERIE 117
Query: 75 PLIRNVIVRLINNPQHDGSREILRMVQE---GIGCCG 108
+ I +N G + R + E CCG
Sbjct: 118 KNLHGDIRSTMNEYHLSGHDAVTRAIDEIHRDFKCCG 154
>SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10)
Length = 691
Score = 33.1 bits (72), Expect = 0.15
Identities = 23/115 (20%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Query: 50 LALFVFGLIGACVVLDFSTYDSSIQPLIRNVIVRLINNPQHDGSREILRMVQEGIGCCGA 109
L +F L A L ++ Y ++ +R + +++ ++ + VQ CCG
Sbjct: 409 LLALIFVLEIAAGALAYA-YKGKLEGYVRTGLKNGVDHYDKKEYKKAMDKVQGEFKCCGY 467
Query: 110 DGPMDYINLNKPLPSECRDSVTGNAYFHGCVDEMTWYLEGKTGWLAGIVLASCMV 164
+ D+ N +P C+D+ G + CV + +L+ + G+ + V
Sbjct: 468 EDSNDHGYKNSTVPKSCKDT-NGTVFSKNCVKGLEKFLKDHLIVVGGVGIGIAFV 521
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 31.5 bits (68), Expect = 0.46
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
Query: 9 YFIGIYIMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFST 68
Y G +++ + I +V+F GC A EN +L + L L + A + ++
Sbjct: 52 YATGSRLVIAVGVIIAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRG 111
Query: 69 YDS------SIQPLIRNVIVRLI----NNPQHDGSREILRMVQEGIGCCGADGPMDY 115
+S ++ I + + + + + DG + +QE CCG +G +D+
Sbjct: 112 KNSLNSDSVKVKDEIESDLTKALKGDYGSSGQDGVTKAFDALQEKQKCCGVNGYLDW 168
>SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13)
Length = 174
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 45 YIGSQLALF-VFGLIGACVVLDFSTYDSSIQPLIRNVIVRLINNPQHDGSREILRMVQEG 103
+ G LAL + G++ A +++ + I I + I N G+R ++ +QE
Sbjct: 37 FTGCVLALISLAGIVAA--IINSKVFLIIINRSILADLKNRIKNFPGPGTR-VVDSIQER 93
Query: 104 IGCCGAD-GPMDYIN 117
+ CCGAD GP D++N
Sbjct: 94 LQCCGADSGPNDWMN 108
>SB_20290| Best HMM Match : ig (HMM E-Value=2.9e-15)
Length = 978
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 32 GSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYDSSIQPLIR---NVIVRLINNP 88
GS +++ L G + F GLIG +F+ SIQPL R NV V I +
Sbjct: 539 GSLIVDVSYTLTGDVKDPQTFFKEGLIGNAPKYNFTIVPESIQPLQRRLCNVFVPSIYDA 598
Query: 89 QHDGSRE 95
H SR+
Sbjct: 599 SHAISRD 605
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 4 LELQKYFIGIYIMLIASLGIMVVAFLGCGSALMENVTLL 42
L Y YI++ I ++ F+GC AL E+ LL
Sbjct: 208 LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLL 246
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 4 LELQKYFIGIYIMLIASLGIMVVAFLGCGSALMENVTLL 42
L Y YI++ I ++ F+GC AL E+ LL
Sbjct: 66 LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLL 104
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/70 (21%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 7 QKYFIGIYIMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDF 66
+K +GI ++L ++ +++VA ++ +++ LL Y + + + L+ C++L+F
Sbjct: 312 EKVGLGITVLLAMTVFLLLVAETLPSTS--DHIPLLGQYFVATMFVTAISLVATCLILNF 369
Query: 67 STYDSSIQPL 76
+ S P+
Sbjct: 370 FHRNPSTSPM 379
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 15 IMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVL 64
+M+ A +++V +GC + + EN +L Y+ + +F+ + V +
Sbjct: 62 LMIAAGCLVIIVCVVGCVAVIKENRFILVSYLIMLVLIFILEIATGVVAV 111
>SB_32924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 48 SQLALFVFGLIGACVVLDFSTYDSSIQPLIRNVIVR 83
SQ VF +I C+V+ DSS++P R++ R
Sbjct: 179 SQFIPMVFFVISYCLVIKKLRQDSSVEPRDRSIATR 214
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.326 0.143 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,889,374
Number of Sequences: 59808
Number of extensions: 231545
Number of successful extensions: 570
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 552
Number of HSP's gapped (non-prelim): 23
length of query: 190
length of database: 16,821,457
effective HSP length: 78
effective length of query: 112
effective length of database: 12,156,433
effective search space: 1361520496
effective search space used: 1361520496
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -