Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001007-TA|BGIBMGA001007-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
(740 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g16480.1 68417.m02495 sugar transporter family protein simila... 41 0.003
At3g28770.1 68416.m03591 expressed protein 38 0.024
At2g35740.1 68415.m04386 sugar transporter family protein simila... 36 0.097
At2g22795.1 68415.m02704 expressed protein 34 0.30
At1g56660.1 68414.m06516 expressed protein 33 0.91
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 32 1.2
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 32 1.6
At3g22450.1 68416.m02837 expressed protein ; expression supporte... 31 2.1
At1g02965.1 68414.m00266 hypothetical protein 31 2.1
At1g13110.1 68414.m01520 cytochrome P450 71B7 (CYP71B7) identica... 31 2.8
At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family... 31 3.7
At3g47270.1 68416.m05135 hypothetical protein similar to At2g049... 30 4.8
At2g35040.1 68415.m04299 AICARFT/IMPCHase bienzyme family protei... 30 4.8
At1g04920.1 68414.m00489 sucrose-phosphate synthase, putative si... 30 4.8
At5g20470.1 68418.m02433 myosin, putative similar to PIR|T00727 ... 30 6.4
At4g21480.1 68417.m03106 glucose transporter, putative similar t... 30 6.4
At4g02400.1 68417.m00324 U3 ribonucleoprotein (Utp) family prote... 30 6.4
At3g20460.1 68416.m02590 sugar transporter, putative similar to ... 30 6.4
At1g66730.1 68414.m07585 ATP dependent DNA ligase family protein... 30 6.4
At1g10870.1 68414.m01249 ARF GTPase-activating domain-containing... 30 6.4
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 29 8.4
>At4g16480.1 68417.m02495 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 582
Score = 40.7 bits (91), Expect = 0.003
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 591 LAATDISMRFCTPFVAGKIG-WENNTF-----FLVGVMTMAMGRVVLAYSQASWVLTSVA 644
L +T +SM V +G W N+ F L+ + +G +V+A++ A WV+
Sbjct: 68 LQSTIVSMAVAGAIVGAAVGGWINDKFGRRMSILIADVLFLIGAIVMAFAPAPWVIIVGR 127
Query: 645 VIIGFGKGLRTVFMALVIPTYVPLDKLPGA---TGLQLITAG 683
+ +GFG G+ ++ L I P ++ GA T LIT G
Sbjct: 128 IFVGFGVGMASMTSPLYISEASPA-RIRGALVSTNGLLITGG 168
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 37.9 bits (84), Expect = 0.024
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 420 MDGQYGDKYQKDNHSNISFKNNEENEERKYLRDNHSNQSYRTKHRRKSNNFNFESEVLKQ 479
++ + G++ K N S + NNE ++E K SN+ Y K K N N + E +
Sbjct: 451 LENKVGNEELKGNASVEAKTNNESSKEEKREESQRSNEVYMNKETTKGENVNIQGESIGD 510
Query: 480 ASLKLEEYLKEREDDVGKAKIIVTPPPDNNNGEIRQK 516
++ ++ E ++DV K K+ N+ E Q+
Sbjct: 511 ST---KDNSLENKEDV-KPKVDANESDGNSTKERHQE 543
Score = 33.5 bits (73), Expect = 0.52
Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 8/192 (4%)
Query: 305 SKKPSMTNLLENRSRKSSTLYLNESKKNSSANLGALAQERDPLKPKRKTSITTRDDLIPE 364
+KK + + R K S ++ +K S +L A +E + K K+++ +
Sbjct: 1026 AKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEET-KEKKESENHKSKKKEDK 1084
Query: 365 SEIEDCPTLKAPQDLKAEEKVVVEKIDPKQALVIADKAQKHLAGXXXXXXXXXXXMDGQY 424
E ED ++K +D K E+K E K+ D + Q+
Sbjct: 1085 KEHEDNKSMKKEED-KKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQH 1143
Query: 425 GDKYQKDNHSNISFKNNEENEERKYLRDNHSNQSYRTKHRRKSNNFNFESEVLKQASLK- 483
+K++ K +ENEE+ ++ S++S + + +K + + + K+ +K
Sbjct: 1144 VKLVKKESDK----KEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKE 1199
Query: 484 -LEEYLKEREDD 494
E+ LK+ E+D
Sbjct: 1200 SEEKKLKKNEED 1211
Score = 32.3 bits (70), Expect = 1.2
Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 3/185 (1%)
Query: 315 ENRSRKSSTLYLNESKKNSSANLGALAQERDPLKPKRKTSITTRDDLIPESEIEDCPTLK 374
E+R K+ +K S N + +E D + + S+ +D + + E+ + K
Sbjct: 1054 ESRDLKAKKKEEETKEKKESENHKSKKKE-DKKEHEDNKSMKKEEDKKEKKKHEESKSRK 1112
Query: 375 APQDLKAEEKVVVEKIDPKQALVIADKAQKHLAGXXXXXXXXXXXMDGQYGDKYQKDNHS 434
+D K EK+ + + K+ K +H+ + + + K+ S
Sbjct: 1113 KEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSET--KEIES 1170
Query: 435 NISFKNNEENEERKYLRDNHSNQSYRTKHRRKSNNFNFESEVLKQASLKLEEYLKEREDD 494
+ S KN + +E+K +D + K + E + KQ S++ + KE + +
Sbjct: 1171 SKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKE 1230
Query: 495 VGKAK 499
K K
Sbjct: 1231 KNKPK 1235
Score = 31.9 bits (69), Expect = 1.6
Identities = 41/212 (19%), Positives = 80/212 (37%), Gaps = 9/212 (4%)
Query: 301 SHLASKKPSMTNLLENRSRKSSTLYLNESKKNSSANLGALAQERDPLKPKRKTSITTRDD 360
+H + KK +N+S K + K S + ++D K + + S ++D
Sbjct: 1075 NHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKED 1134
Query: 361 LIPESEIEDCPTLKAPQDLKAEEKVVVEKIDPKQALVIADKAQKHLAGXXXXXXXXXXXM 420
+ + + +K D K E+K EK + K+ + + K+QK+
Sbjct: 1135 KNEKKKSQHVKLVKKESD-KKEKKENEEKSETKE--IESSKSQKN----EVDKKEKKSSK 1187
Query: 421 DGQYGDKYQKDNHSNISFKNNEENEERKYLRDNHSNQSYRTKHRRKSNNFNFESEVLKQA 480
D Q + + K NE E+RK N+ + + K+ + + KQ+
Sbjct: 1188 DQQKKKEKEMKESEEKKLKKNE--EDRKKQTSVEENKKQKETKKEKNKPKDDKKNTTKQS 1245
Query: 481 SLKLEEYLKEREDDVGKAKIIVTPPPDNNNGE 512
K E E ++ + K T D++ +
Sbjct: 1246 GGKKESMESESKEAENQQKSQATTQADSDESK 1277
>At2g35740.1 68415.m04386 sugar transporter family protein similar
to proton myo-inositol transporter [Homo sapiens]
GI:15211933; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 35.9 bits (79), Expect = 0.097
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 596 ISMRFCTPFVAGKIG-WENNTF-----FLVGVMTMAMGRVVLAYSQASWVLTSVAVIIGF 649
+SM V IG W N+ F L+ + +G +V+ + A WV+ +++GF
Sbjct: 72 VSMTVAGAIVGAAIGGWYNDKFGRRMSVLIADVLFLLGALVMVIAHAPWVIILGRLLVGF 131
Query: 650 GKGLRTVFMALVIPTYVPLDKLPGA---TGLQLITAG 683
G G+ ++ L I P ++ GA T LIT G
Sbjct: 132 GVGMASMTSPLYISEMSPA-RIRGALVSTNGLLITGG 167
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 34.3 bits (75), Expect = 0.30
Identities = 30/182 (16%), Positives = 79/182 (43%), Gaps = 3/182 (1%)
Query: 315 ENRSRKSSTLYLNESKKNSSANLGALAQERDPLKPKRKTSITTRDDLIPESEIEDCPTLK 374
E+ S++ + E+K N ++ ++++ K +++ + + + E+E ++
Sbjct: 513 ESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESS 572
Query: 375 APQDLKAEEKVVVEKIDPKQALVIADKAQKHLAGXXXXXXXXXXXMDGQYGDKYQKDNHS 434
+ ++ K +E +EK + +K + + + + +K +++ S
Sbjct: 573 SQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEK--EESSS 630
Query: 435 NISFKN-NEENEERKYLRDNHSNQSYRTKHRRKSNNFNFESEVLKQASLKLEEYLKERED 493
N S +N N E+E+++ + +N T K N+ + + + + + EE K E
Sbjct: 631 NESQENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGET 690
Query: 494 DV 495
+V
Sbjct: 691 EV 692
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 32.7 bits (71), Expect = 0.91
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 380 KAEEKVVVEKIDPKQALVIADKAQKHLAGXXXXXXXXXXXMDGQYGDKYQKDNHSNISFK 439
K + K ++ P++ ADK +KH DG+ K +KD S K
Sbjct: 134 KKKNKKEKDESGPEEKNKKADKEKKH--EDVSQEKEELEEEDGKKNKKKEKDE-SGTEEK 190
Query: 440 NNEENEERKYLRDNHSNQSYRTKHRR---KSNNFNFESEVLKQASLKLEEYLKEREDDVG 496
+ +E+K ++ SN+ + K ++ + + E E K+ + ++ +KE++
Sbjct: 191 KKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKKN 250
Query: 497 KAK 499
K K
Sbjct: 251 KKK 253
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 32.3 bits (70), Expect = 1.2
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 568 LLTPFILGDYGKSKSEIAFFMSLLAATDISMRFCTPFVAGKIGWENNTFFLVGVMTMAMG 627
L+T D K I +SL+A + R T A G L G+M A+
Sbjct: 549 LVTLVSYEDTVPEKIRILCLLSLVALSQDRTRQPTVLTAVTSGGHRG--LLSGLMQKAID 606
Query: 628 RVVLAYSQ-----ASWVLTSVAVIIGFGKGLRTVFMALVIPTYVPLDKLPGATGLQLITA 682
VV S+ A +L+ V V++ G + A +IPT VPL K L L++A
Sbjct: 607 SVVCITSKWSLAFAEALLSLVTVLVSSSSGCSAMREAGLIPTLVPLIKDTDPQHLHLVSA 666
Query: 683 GV 684
V
Sbjct: 667 AV 668
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 31.9 bits (69), Expect = 1.6
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 420 MDGQYGDKYQKDNHSNISFKNNEENEERKYLRDNHSNQSYRTKHRRKSNNFNFESEVLKQ 479
M ++ DKY++ H K E +E+K +D ++ K ++ + + E K+
Sbjct: 7 MGFEFQDKYKEKKHKKD--KEKREGKEKKS-KDRSKDKQKERKEKKDKHKDQKDKEKGKE 63
Query: 480 ASLKLEEYLKEREDDVGKAKIIVTPPPDNN-NGE 512
LEE E + G + VT NN NGE
Sbjct: 64 KGKPLEEKKAELLTNAGHRENRVTDTVQNNSNGE 97
>At3g22450.1 68416.m02837 expressed protein ; expression supported
by MPSS
Length = 311
Score = 31.5 bits (68), Expect = 2.1
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 426 DKYQKDNHSNISFKNNEENEERKYLRDNHSNQSYRTKHRRKSNNFNFESEVLKQASLKLE 485
D ++K+ H N + N+E EE K +DN + R ++++++++F E++ +A K E
Sbjct: 126 DFHRKNQHKNAKKEQNQE-EETKIKKDN--KKEVRDEYKKRNDSFTGETDHPNEAVKKRE 182
>At1g02965.1 68414.m00266 hypothetical protein
Length = 162
Score = 31.5 bits (68), Expect = 2.1
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 315 ENRSRKSSTLYLNESKKNSSANLGALAQERDPLKPKRKTSITTRDDLIPESEIEDCPTLK 374
EN + L L ++K GAL RDP + +I T DL+P+ ++C T
Sbjct: 84 ENAKEEEGGLIL-QTKLEKLIGCGALNYARDPGDVTVEATILTSTDLMPKI-YQNCVTGN 141
Query: 375 A---PQDLKAEEKVVVEKI 390
A P+++ A+ KV++ I
Sbjct: 142 AEDLPEEVLAKNKVLISAI 160
>At1g13110.1 68414.m01520 cytochrome P450 71B7 (CYP71B7) identical
to (SP:Q96514) cytochrome P450 71B7 [Arabidopsis
thaliana]; PF|00067 Cytochrome P450 family. ESTs
gb|T44875, gb|T04814, gb|R65111, gb|T44310 and gb|T04541
come from this gene; identical to cDNA cytochrome P450
GI:1523795, ATCYP71B7
Length = 504
Score = 31.1 bits (67), Expect = 2.8
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 678 QLITAGVVYLALGPVVGWIKDNAS-TAVTLHCLNIFTYL-TAFTWTLEKYITARRQKSTE 735
+++ AGV + P VGW+ D S TL+ N+F+ L T F L+ +I RQ S
Sbjct: 211 EMLVAGVAFTDFFPGVGWLVDRISGQNKTLN--NVFSELDTFFQNVLDDHIKPGRQVSEN 268
Query: 736 QDM 738
D+
Sbjct: 269 PDV 271
>At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family
protein (ROS1) similar to DEMETER protein [Arabidopsis
thaliana] GI:21743571; contains Pfam profile PF00730:
HhH-GPD superfamily base excision DNA repair protein
Length = 1393
Score = 30.7 bits (66), Expect = 3.7
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 432 NHSNISFKNNEENEERKYLRDNHSNQS 458
NHS+++ KN + +EE+ Y+ N +++S
Sbjct: 663 NHSSVTLKNTQPDEEKDYVPSNETSRS 689
>At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At5g34895, At2g02200
Length = 671
Score = 30.3 bits (65), Expect = 4.8
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 425 GDKYQKDNHSNISFKNNEENEERKYLRDNHSNQSY-RTKHRRKSNNFNFESEVLKQASLK 483
GD+ + + EE EE+ RD+HS + T+ + + E E +
Sbjct: 378 GDEEMEGEEEKQEEEGKEEEEEKVEYRDHHSTCNVEETEKQENPKQGDEEMEREEGKEEN 437
Query: 484 LEEYLKEREDDVGKAKIIVTPPPDN 508
+EE+ + E + KA +I++ DN
Sbjct: 438 VEEHDEHDETEDQKAYVILSDDEDN 462
>At2g35040.1 68415.m04299 AICARFT/IMPCHase bienzyme family protein
similar to SP|P12048 Bifunctional purine biosynthesis
protein purH [Includes:
Phosphoribosylaminoimidazolecarboxamide
formyltransferase (EC 2.1.2.3) (AICAR transformylase);
IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP
synthetase) (ATIC)] {Bacillus subtilis}; contains Pfam
profiles PF01808: AICARFT/IMPCHase bienzyme, PF02142:
MGS-like domain
Length = 596
Score = 30.3 bits (65), Expect = 4.8
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 314 LENRSRKSSTLYLNESKKNSSANL-------GALAQERDPLKPKRKTSITTRDDLIPESE 366
LE KS TL + E+KKN L G LAQ+ D L P+ + + D ESE
Sbjct: 422 LEVLKGKSKTLRILEAKKNDQGKLSLRQVGGGWLAQDSDDLTPEDISFNSVSDKTPTESE 481
Query: 367 IED 369
+ D
Sbjct: 482 LAD 484
>At1g04920.1 68414.m00489 sucrose-phosphate synthase, putative
similar to GB:Y11795 from [Craterostigma plantagineum]
Length = 1062
Score = 30.3 bits (65), Expect = 4.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 161 GLGPMVWPYVITGLYNAFGETGAIL 185
G G VWPYVI G Y G++ A+L
Sbjct: 303 GKGKPVWPYVIHGHYADAGDSAALL 327
>At5g20470.1 68418.m02433 myosin, putative similar to PIR|T00727
myosin heavy chain PCR43 [Arabidopsis thaliana]
Length = 556
Score = 29.9 bits (64), Expect = 6.4
Identities = 26/106 (24%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 300 NSHLASKKPSMTNLLEN--RSRKSSTLYLNESKKNSSANLGALAQERDPLKPKRKTSITT 357
N LA++ ++T L+ S + YLN S K ++ + GAL + +D L+ KR +T
Sbjct: 64 NLELATELETVTRKLDQLQESVQRFNEYLNMSLKMAARDTGALREAKDKLE-KRVEELTL 122
Query: 358 RDDL--IPESEIEDCPTLKAPQDLKAEEKVVVEKIDPKQALVIADK 401
R L +++E+ T + + +A + + ++ ++ A+V+ ++
Sbjct: 123 RLQLETRQRTDLEEAKTQEYAKQQEALQAMWLQ-VEEANAVVVRER 167
>At4g21480.1 68417.m03106 glucose transporter, putative similar to
glucose transporter (Sugar carrier) STP1, Arabidopsis
thaliana, SP|P23586; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 508
Score = 29.9 bits (64), Expect = 6.4
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 584 IAFFMSLLAATDISMRFCTPFVAGKIGWENNTFFLVGVMTMAMGRVVLAYSQASWVLTSV 643
+ F S L + +V + G L+G + G ++ ++ A W+L
Sbjct: 82 LTLFTSSLYLAALCSSLVASYVTRQFG--RKISMLLGGVLFCAGALLNGFATAVWMLIVG 139
Query: 644 AVIIGFGKGLRTVFMALVIPTYVPLDKLPGA--TGLQL-ITAGVV 685
+++GFG G + L + P K GA G QL IT G++
Sbjct: 140 RLLLGFGIGFTNQSVPLYLSEMAPY-KYRGALNIGFQLSITIGIL 183
>At4g02400.1 68417.m00324 U3 ribonucleoprotein (Utp) family protein
contains Pfam profile: PF04615 Utp14 protein
Length = 858
Score = 29.9 bits (64), Expect = 6.4
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 314 LENRSRKSSTLYLNESKKNSSANLGALAQERDP-LKPKRKTSITTRDDLIPESEIED 369
L R+R++ T+Y N+ + +GA+A E P + ++K + +D+ + E+ ED
Sbjct: 228 LVKRNREAPTVYFNQPVNVGYSTVGAIASEFQPRTEFEKKMASVLKDNELGEAHKED 284
>At3g20460.1 68416.m02590 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 488
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 627 GRVVLAYSQASWVLTSVAVIIGFGKGLRTVFMALVIPTYVPLDKLPGA----TGLQLITA 682
G +++A+SQA+W L + +G G+ + + + I P K+ G L + +
Sbjct: 133 GWLMIAFSQATWSLDIGRLFLGVAAGVASYVVPVYIVEIAP-KKVRGTFSAINSLVMCAS 191
Query: 683 GVVYLALGPVVGWIK 697
V LG V+ W K
Sbjct: 192 VAVTYLLGSVISWQK 206
>At1g66730.1 68414.m07585 ATP dependent DNA ligase family protein
contains Pfam profile: PF01068 ATP dependent DNA ligase
domain
Length = 1417
Score = 29.9 bits (64), Expect = 6.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 385 VVVEKIDPKQALVIADKAQKHLAGXXXXXXXXXXXMDGQYGDKYQKDNHSNISFKNNE-- 442
V +EK D K+ +K QKH +G + G Y YQK+ S++ ++
Sbjct: 379 VDIEKFDCKEV----NKMQKHFSGLVDEMANKKDFLLGFYRQSYQKNEKSDVDVVSHSAE 434
Query: 443 --ENEERKYLRDNHSN 456
E EE+ D N
Sbjct: 435 VYEEEEKNACEDGGEN 450
>At1g10870.1 68414.m01249 ARF GTPase-activating domain-containing
protein
Length = 775
Score = 29.9 bits (64), Expect = 6.4
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 295 DGSNVNSHLASKKPSMTNLLENRSRKSSTLYLNES---KKNSSANLGALAQERDPLKPKR 351
DGS + SH + KP + + + YL ++ K S ANL A ++ + ++ +
Sbjct: 561 DGSAL-SHASVSKPCPEDSFSVKEKYILGKYLEKALVIKDESEANLSAASRIWEAVQSRN 619
Query: 352 -----KTSITTRDDLIPESEIEDCPTLKAPQDLKAEEKVVVEKIDP 392
+ +TT D I ++ +D + A + A EK V ++ DP
Sbjct: 620 IREIYRLIVTTGDVNIINTKFDDITDIDAYHHIDAAEKAVKKRHDP 665
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 29.5 bits (63), Expect = 8.4
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 568 LLTPFILGDYGKSKSEIAFFMSLLAATDISMRFCTPFVAGKIGWENNTFFLVGVMTMAMG 627
L+T D +K I SL+A + R T A G L G+M A+
Sbjct: 300 LVTLVSYEDTVPAKIRILCLQSLVALSQDRTRQPTVLTAVTSGGHRG--LLSGLMQKAID 357
Query: 628 RVVLAYSQ-----ASWVLTSVAVIIGFGKGLRTVFMALVIPTYVPLDKLPGATGLQLITA 682
V+ S+ A +L+ V V++ G + A +IPT VPL K L L++
Sbjct: 358 SVICNTSKWSLAFAEALLSLVTVLVSSSSGCSAMREAGLIPTLVPLIKDTDPQHLHLVST 417
Query: 683 GV 684
V
Sbjct: 418 AV 419
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.134 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,430,108
Number of Sequences: 28952
Number of extensions: 587068
Number of successful extensions: 1700
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1676
Number of HSP's gapped (non-prelim): 37
length of query: 740
length of database: 12,070,560
effective HSP length: 86
effective length of query: 654
effective length of database: 9,580,688
effective search space: 6265769952
effective search space used: 6265769952
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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