Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40035
(890 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 140 4e-32
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 139 1e-31
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 132 1e-29
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 105 2e-21
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 99 1e-19
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 98 3e-19
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 85 2e-15
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 79 2e-13
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 77 5e-13
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 77 5e-13
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 75 2e-12
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 75 3e-12
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 69 2e-10
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 69 2e-10
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 68 4e-10
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 66 9e-10
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 66 9e-10
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 65 2e-09
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 65 3e-09
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 64 6e-09
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 62 2e-08
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 61 4e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 60 7e-08
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 58 3e-07
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 55 3e-06
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 54 5e-06
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 52 1e-05
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 50 8e-05
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 50 1e-04
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 48 2e-04
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 48 4e-04
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 47 6e-04
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 44 0.007
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 42 0.016
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 42 0.016
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 42 0.028
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 41 0.037
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 39 0.15
UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3; ... 38 0.26
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 38 0.26
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 38 0.34
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 38 0.45
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 37 0.60
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 37 0.60
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 37 0.60
UniRef50_A4CNC1 Cluster: Putative uncharacterized protein; n=2; ... 36 1.8
UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein ... 35 3.2
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 35 3.2
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 34 4.2
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 34 5.6
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 34 5.6
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007... 33 7.4
UniRef50_Q19CV5 Cluster: Gp49 recombination endonuclease VII; n=... 33 7.4
UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1; Filob... 33 7.4
UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;... 33 9.8
UniRef50_Q120Q7 Cluster: Mandelate racemase/muconate lactonizing... 33 9.8
UniRef50_Q8IDM7 Cluster: DNA topoisomerase III, putative; n=2; P... 33 9.8
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 33 9.8
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 33 9.8
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 140 bits (339), Expect = 4e-32
Identities = 67/94 (71%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 408
GK ++I+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 122 bits (294), Expect = 1e-26
Identities = 55/64 (85%), Positives = 61/64 (95%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 85.0 bits (201), Expect = 2e-15
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G + + LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 139 bits (336), Expect = 1e-31
Identities = 67/94 (71%), Positives = 75/94 (79%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 408
GK ++I+ HL+NNPALE+LLPHI+GNVGFVFT+ DL EVRD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (284), Expect = 2e-25
Identities = 53/64 (82%), Positives = 60/64 (93%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 244
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 245 MRKA 256
MRKA
Sbjct: 61 MRKA 64
Score = 87.4 bits (207), Expect = 4e-16
Identities = 40/61 (65%), Positives = 53/61 (86%), Gaps = 3/61 (4%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEA---NLLNMLNISPFSYGLVVKQVYDSGIFFALKFLD 677
+GTIEI++DV ++KPGDKVGASEA N+LNMLNISPFSYGL+++QVYD+G ++ + LD
Sbjct: 149 RGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLD 208
Query: 678 I 680
I
Sbjct: 209 I 209
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 132 bits (319), Expect = 1e-29
Identities = 59/94 (62%), Positives = 76/94 (80%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 408
GK ++++ HL+ NP LEK+LPH+KGN+GFVFT D+V++R+ +L N+V APA+ GA
Sbjct: 56 GKNTTIRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGA 115
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP+ V +PA NTGLGPEKTSFFQALSI TKISR
Sbjct: 116 IAPVDVFVPASNTGLGPEKTSFFQALSIATKISR 149
Score = 95.1 bits (226), Expect = 2e-18
Identities = 41/64 (64%), Positives = 51/64 (79%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 244
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIR SLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 245 MRKA 256
+RKA
Sbjct: 61 IRKA 64
Score = 79.8 bits (188), Expect = 9e-14
Identities = 37/58 (63%), Positives = 46/58 (79%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
+GTIEI+++VH++K G+KVGASEA LL ML I PF+YGL + QVYDSG FA LDI
Sbjct: 149 RGTIEILSEVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIVQVYDSGSVFAPSILDI 206
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 105 bits (252), Expect = 2e-21
Identities = 48/94 (51%), Positives = 69/94 (73%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 408
GK ++IK+ + P LE+LLPHIKGNVGF+FT+GDL +++ KL E K +PA+ G
Sbjct: 63 GKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGV 122
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
IAP V++PA +TGL P +T+F QAL+I +KI++
Sbjct: 123 IAPNDVIVPAGDTGLDPTQTNFVQALNIASKITK 156
Score = 66.1 bits (154), Expect = 1e-09
Identities = 35/74 (47%), Positives = 46/74 (62%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 244
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 245 MRKASKTTWTTIQP 286
+RKA K T QP
Sbjct: 68 IRKAIKNQAET-QP 80
Score = 63.3 bits (147), Expect = 8e-09
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KG IEI ++ ++K G+KVG S+A LL L I+PF YG V+ VYD+GI + K LD+
Sbjct: 156 KGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYDNGIVYDAKALDL 213
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 99.1 bits (236), Expect = 1e-19
Identities = 48/96 (50%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 402
GK +S++ H +N N A+ LLP ++GNVG +FT+GDL EV +++ + KV APAR
Sbjct: 56 GKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARV 115
Query: 403 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
G +AP+ VV+ NTGL P +TSFFQ L+IPTKI++
Sbjct: 116 GLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINK 151
Score = 74.1 bits (174), Expect = 4e-12
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KGT+EII V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G F+ + LD+
Sbjct: 151 KGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDL 208
Score = 73.3 bits (172), Expect = 7e-12
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 244
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 245 MRKA 256
M+++
Sbjct: 61 MKRS 64
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 97.9 bits (233), Expect = 3e-19
Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 402
GK +S++ H D N A LLP ++GNVG +FT+GDL EV +++ + KV APAR
Sbjct: 57 GKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARV 116
Query: 403 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
G +AP+ VV+ NTGL P +TSFFQ L+IPTKI++
Sbjct: 117 GLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 70.9 bits (166), Expect = 4e-11
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KGT+EII V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G F + L++
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNL 209
Score = 70.1 bits (164), Expect = 7e-11
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = +2
Query: 80 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRKA 256
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM+++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRS 65
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 85.4 bits (202), Expect = 2e-15
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA-PARPG 405
GK ++K +L P +EKLLP +K N+GFVF + DL E+R+ +L+NK + PAR G
Sbjct: 56 GKNTRIRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLG 115
Query: 406 AIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKI 504
IAP+ V IP TG+ P TSF ++L I TKI
Sbjct: 116 VIAPIDVFIPPGPTGMDPSHTSFLESLGISTKI 148
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/66 (46%), Positives = 39/66 (59%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 244
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 245 MRKASK 262
+R A K
Sbjct: 61 IRTALK 66
Score = 60.9 bits (141), Expect = 4e-08
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KG IEI VH++K G+KV AS A LL N++P SYG+ V+ VYD G+ + K LDI
Sbjct: 150 KGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDI 206
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 78.6 bits (185), Expect = 2e-13
Identities = 45/100 (45%), Positives = 63/100 (63%)
Frame = +1
Query: 211 LQYRAHGKKHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 390
++ RA KK S D L N +EK L + GN +FT ++ + L +++VQA
Sbjct: 63 VERRAEDKK----ASAYDKLLYNTCIEKKL--LCGNTALIFTNEEIPVITAVLDKHRVQA 116
Query: 391 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
PAR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI++
Sbjct: 117 PARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAK 156
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KGT+EI++D +L GD+V S A LL L+ISPF Y + V+ V+D G+ F + L I
Sbjct: 156 KGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSI 213
Score = 37.1 bits (82), Expect = 0.60
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRK 253
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKK 61
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 77.4 bits (182), Expect = 5e-13
Identities = 36/83 (43%), Positives = 57/83 (68%)
Frame = +1
Query: 280 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 459
P +E L+ +KGN+G +FT DL +++D + + +APAR G++A V I A TGL P
Sbjct: 91 PHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGTGLDP 150
Query: 460 EKTSFFQALSIPTKISRVLLKSS 528
++T+FFQ L+IPTKI++ ++ S
Sbjct: 151 KQTAFFQNLAIPTKIAKAQIEIS 173
Score = 56.4 bits (130), Expect = 9e-07
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +3
Query: 492 PYQDFKGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKF 671
P + K IEI D I+ G+KVG++EA LL LNI+PFSY L V V+D+G +
Sbjct: 162 PTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPFSYKLSVAHVFDNGNVYGPGV 221
Query: 672 LDI 680
LDI
Sbjct: 222 LDI 224
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLR-GSSIVLMGKNT 241
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 242 MMRKA 256
+++ A
Sbjct: 61 LIKAA 65
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 77.4 bits (182), Expect = 5e-13
Identities = 43/94 (45%), Positives = 51/94 (54%)
Frame = -1
Query: 509 LEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVN 330
L ILVG +AWKKEV G PVL A +GA AP AGA TL S V
Sbjct: 4 LAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGSLVK 63
Query: 329 TKPTLPLMCGNSFSRAGLLSRWSLMLCASLCFFP 228
TKPTLPL GN+FS++G + LM ++ F P
Sbjct: 64 TKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLP 97
Score = 38.7 bits (86), Expect = 0.20
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = -3
Query: 255 ALRIIVFFPMSTILEPRSEKRICCICCEPTLSAPTMKHFGYSSKSWMILTK 103
AL +VF P+ T P + CIC E TLS PT YSSK + L K
Sbjct: 89 ALLTMVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSSKYSLNLAK 139
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 75.4 bits (177), Expect = 2e-12
Identities = 35/75 (46%), Positives = 48/75 (64%)
Frame = +1
Query: 286 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 465
L+ L + G VGF+FT + +++ + ENKV+ PAR GA+AP+ VVIP TG+ P
Sbjct: 93 LDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPAS 152
Query: 466 TSFFQALSIPTKISR 510
FF AL IPTKI +
Sbjct: 153 IQFFHALQIPTKIEK 167
Score = 53.2 bits (122), Expect = 9e-06
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSL-RGSSIVLMGKNT 241
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR L + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 242 MMRKASKT 265
+ +K T
Sbjct: 61 LFKKVLAT 68
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSG 650
KG I+I D +LK G KVG S+A LL L PF YG+ V YD+G
Sbjct: 167 KGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNG 214
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 74.5 bits (175), Expect = 3e-12
Identities = 38/94 (40%), Positives = 56/94 (59%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 408
GKK + I+D D+ P L+ L ++K N +F + ++ EV+ + +V APA+ G
Sbjct: 55 GKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGV 114
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
AP V+IPA TG+ P +TSF Q L I TKI+R
Sbjct: 115 FAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINR 148
Score = 69.3 bits (162), Expect = 1e-10
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFA 662
+G I+I+N+VHI+K G KVGASEA LL LNI PF+YGL K +YD+G ++
Sbjct: 148 RGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYS 199
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRK 253
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRK 62
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 68.9 bits (161), Expect = 2e-10
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +1
Query: 250 QSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 384
Q+I+ HL+ N L KLLPHIK VGFVFT+GDLVEVRDKL+E+KV
Sbjct: 693 QAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 37.1 bits (82), Expect = 0.60
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +3
Query: 492 PYQDFKGTIEIINDVHILKPGDKVGASEANLL--NMLNISP 608
P + KGTIEIINDV ILK GDK+ ++ ++L+I P
Sbjct: 742 PIKISKGTIEIINDVPILKSGDKIEQVYGSIFSPDILDIKP 782
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/87 (42%), Positives = 51/87 (58%)
Frame = +1
Query: 244 DAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 423
D + K+ P LE L+P ++GNV +F ++ EV + E+KV A A+ G IAP
Sbjct: 71 DFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPND 130
Query: 424 VVIPAHNTGLGPEKTSFFQALSIPTKI 504
V + TG+ P +TSFFQAL I TKI
Sbjct: 131 VHVYPGPTGMDPSQTSFFQALGIFTKI 157
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KG I+I+N++H++ KVG SEA LL L + PFS+GL VK VYD+G ++ + L +
Sbjct: 159 KGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSFGLKVKNVYDNGSVYSAEVLKL 216
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRKASK 262
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R K
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLK 59
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 67.7 bits (158), Expect = 4e-10
Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +1
Query: 277 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 456
NP L+P + GNVG +FT+GDL EV +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXLN 74
Query: 457 PEKTSFFQALSIPTKISRVLLKSSTMYTS*SPVTKLEL-LKPTFSTC*TSLHSHMVLLLS 633
T PT SRV +K + Y P+ ++ L P + C T V LL
Sbjct: 75 LAHTRASXKPISPT-FSRVSIKMTLHY---QPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
Query: 634 R 636
R
Sbjct: 131 R 131
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 66.5 bits (155), Expect = 9e-10
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 280 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 459
P L L+PH+K + +VF + ++ K+ V APAR G +A V+IP TG+ P
Sbjct: 91 PQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDP 150
Query: 460 EKTSFFQALSIPTKISR 510
+ +FF ALSI TKI +
Sbjct: 151 SQINFFHALSISTKIQK 167
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +2
Query: 77 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRKA 256
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KG IEI +V + G K+G SE +LL +NI PFSYG+ YD+G + L I
Sbjct: 167 KGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEEVLSI 224
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 66.5 bits (155), Expect = 9e-10
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KG +EII+ +L GDKVG S+ANLL MLNI PF Y + + Q+Y+ G+ + +DI
Sbjct: 171 KGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIYDSSLIDI 228
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/77 (38%), Positives = 49/77 (63%)
Frame = +1
Query: 280 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 459
P L + +KG+V FVF +G+ +++ + EN +A A+ G +A V + + TG+ P
Sbjct: 95 PELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTP 154
Query: 460 EKTSFFQALSIPTKISR 510
+KTS+FQAL I TKI++
Sbjct: 155 DKTSYFQALGIATKITK 171
Score = 37.9 bits (84), Expect = 0.34
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +2
Query: 65 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 244
M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 245 MRKA 256
+R+A
Sbjct: 85 IRRA 88
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/92 (39%), Positives = 54/92 (58%)
Frame = +1
Query: 235 KHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 414
K+ + + + LD++ L+ LLP+IK NV FVFT GD + + K +A A+ G +A
Sbjct: 60 KNTIIKRVINQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVA 118
Query: 415 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
P VVI T GP++ F+ AL I TKI++
Sbjct: 119 PADVVIEPMLTQSGPDQHGFYAALGIDTKINK 150
Score = 51.6 bits (118), Expect = 3e-05
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KG IEI+N V+++K GD V S A LL L I PF Y + +YD G + L+I
Sbjct: 150 KGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFFYAMSALNLYDDGEIYDAAVLEI 207
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +2
Query: 80 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRK 253
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKR 66
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 64.9 bits (151), Expect = 3e-09
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Frame = +1
Query: 277 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 456
NP L+P + GNVG +FT+GDL E +++ + KV APA G +A + V++P NTGL
Sbjct: 56 NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAPAHTGLVAHIDVIVPPGNTGLN 115
Query: 457 PEKTSFFQALSIPTKISRVLLKSSTMYTS*SPVTKLEL-LKPTFSTC*TSLHSHMVLLL 630
T PT SRV +K + Y P+ ++ L P + C T V LL
Sbjct: 116 LAHTRASIKPISPT-FSRVSIKMTLHY---QPIKEVALGNTPIIAFCDTDSPMQCVALL 170
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 63.7 bits (148), Expect = 6e-09
Identities = 34/77 (44%), Positives = 40/77 (51%)
Frame = -3
Query: 504 NLGRDRKSLEERGLLWTEAGVVGGNDD*QWGNGTRTSWSLDFVLQQFVTDLNEVSAGEHE 325
NLG + +SLEER L W GV G N D WGN T + WS + V D+ + GE E
Sbjct: 180 NLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQGIVGEDE 239
Query: 324 ANVALDVWQQFLEGWIV 274
NV LD QQ W V
Sbjct: 240 TNVTLDERQQLFVVWEV 256
Score = 44.4 bits (100), Expect = 0.004
Identities = 18/57 (31%), Positives = 38/57 (66%)
Frame = -1
Query: 680 NVQEFQCKKYSRIIYLLNNKTI*EWRDVQHVEKVGFRSSNFVTGLQDVYIVDDFNST 510
++Q+ + + ++ L + +T+ EWR+VQ V++ FRS++ +T + D+ + D+FN T
Sbjct: 121 DIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGT 177
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Frame = +1
Query: 253 SIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI 432
++++ LD P LE LL +I+G V F+FT D ++ L E+K APA+PG IAP +V+
Sbjct: 76 ALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVV 135
Query: 433 PAHNTGLGPEK-TSFFQALSIPTKI--SRVLLKSSTM 534
P T P S Q +P +I +V++ T+
Sbjct: 136 PEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTV 172
Score = 43.2 bits (97), Expect = 0.009
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 68 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLR-GSSIVLMGKNT 241
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 242 MMRKA 256
+MR A
Sbjct: 72 LMRIA 76
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 60.9 bits (141), Expect = 4e-08
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = +3
Query: 504 FKGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
FKGTIEI + ++ G KVGASEAN+LN+L I PF Y L ++ +YD G + L I
Sbjct: 150 FKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYDHGNMYDPSILAI 208
Score = 50.8 bits (116), Expect = 5e-05
Identities = 25/92 (27%), Positives = 44/92 (47%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 408
GK +++ + P + +L H+ G +FT G+ ++D + N + + A+ GA
Sbjct: 58 GKNSLMRRAVDQLKEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGA 117
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKI 504
IAP V++ T + P AL+I KI
Sbjct: 118 IAPCDVILQPQRTSMSPNDIKILHALNIQCKI 149
Score = 36.3 bits (80), Expect = 1.0
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 92 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSI-VLMGKNTMMRKA 256
K +Y K+ L +Y K +V + NV + Q+ IR L VL GKN++MR+A
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRA 66
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.1 bits (139), Expect = 7e-08
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +1
Query: 277 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 453
NP L+P + GNVG + T+GDL EV ++ + KV APAR G ++ + V++P NTGL
Sbjct: 612 NPVFLNLVPLLVGNVGLISTKGDLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 58.0 bits (134), Expect = 3e-07
Identities = 30/92 (32%), Positives = 48/92 (52%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 408
GK + ++D L N+ ++L I GNV F+FT D +++ L N + A+ G
Sbjct: 55 GKNTLIKKVLRDRLKNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQ 114
Query: 409 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKI 504
+A V + T + P+ FQ+L+IPTKI
Sbjct: 115 VAQSDVYLSQGLTNISPDGIGIFQSLNIPTKI 146
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +3
Query: 492 PYQDFKGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSG 650
P + KG IEII + +L+ G K+ +EA LL LNI PF + + Y++G
Sbjct: 143 PTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYENG 195
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 54.8 bits (126), Expect = 3e-06
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 280 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 459
P LEKL+ +I G + T + ++ L +N+ APA+PGA+ P VV+PA T L P
Sbjct: 74 PELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAP 133
Query: 460 EK-TSFFQALSIPTKISR 510
QAL IP +I +
Sbjct: 134 GPIVGQMQALGIPARIEK 151
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDIQT 686
KG + I D +LK G+ + AN+LN L I P GL V VY+ GI + L I
Sbjct: 151 KGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDE 210
Query: 687 RRFSCQVSK 713
+ + + K
Sbjct: 211 QEYIDMLQK 219
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 54.0 bits (124), Expect = 5e-06
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 280 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 453
P ++ ++ KG V +FT ++ L +NK+ AR G IA + VV+PA NTG+
Sbjct: 73 PGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTGIAP 132
Query: 454 GPEKTSFFQALSIPTKISR 510
GP T F +A IPTKI +
Sbjct: 133 GPMLTEFKEA-GIPTKIDQ 150
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 52.4 bits (120), Expect = 1e-05
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Frame = +1
Query: 280 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 453
P ++K++ + G F+FT + L +NK AR G IA + V +PA NTG+
Sbjct: 59 PGMDKMMDQLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAP 118
Query: 454 GPEKTSFFQALSIPTKISR---VLLKSSTMYTS*SPV 555
GP T F +A IPTKI + +LK +T P+
Sbjct: 119 GPMLTEFKEA-GIPTKIDQGTIWILKDTTPVKKGEPI 154
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 50.0 bits (114), Expect = 8e-05
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 277 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 456
N +EK ++ G GF+FT + ++ +++N V+ A+PG + +++PA NTG+
Sbjct: 86 NAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGIN 142
Query: 457 PEKT-SFFQALSIPTKI 504
P S F L IPT+I
Sbjct: 143 PGPVLSRFSKLKIPTQI 159
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 49.6 bits (113), Expect = 1e-04
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQA 483
++G VGF FT + EV + EN V+ A+PG AP +V+PA T P S F
Sbjct: 90 VRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGK 149
Query: 484 LSIPTKI 504
L IPT++
Sbjct: 150 LKIPTRV 156
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 IKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVV 429
IK L+N+ +E L +++G VFT+ + ++ L ++K +APA+ G+IAP +V
Sbjct: 59 IKIALENSDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIV 118
Query: 430 IPAHNTGLGPEK-TSFFQALSIPTKISR 510
+PA +T P Q + IP KI +
Sbjct: 119 VPAGDTSFPPGPILGELQQVGIPAKIDK 146
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 47.6 bits (108), Expect = 4e-04
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 286 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 462
+E + H++G +FT + E+ L + K+ AR G IA +V+PA NTG+ P
Sbjct: 80 VEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGP 139
Query: 463 KTSFFQALSIPTKI 504
S F L IPT++
Sbjct: 140 MISNFNKLGIPTRV 153
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 47.2 bits (107), Expect = 6e-04
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +1
Query: 304 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQA 483
++ N+G +FT +L + + + + + G IA +++I L P +T FFQA
Sbjct: 76 YLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQA 135
Query: 484 LSIPTKISR 510
L IPT+IS+
Sbjct: 136 LGIPTRISK 144
Score = 40.3 bits (90), Expect = 0.064
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 492 PYQDFKGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKF 671
P + K +IEII D+ ++ + S+ LL L+I P YG+ +K+++ S LK
Sbjct: 139 PTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIKPHKYGVKIKKIFSSKGEINLKI 198
Query: 672 LDIQTRRFS 698
L + +
Sbjct: 199 LQMNNNNLT 207
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 110 KIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMM 247
K I LL+ Y IV +N+ S+Q+ IR LRG+S +++GK + +
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFL 56
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 43.6 bits (98), Expect = 0.007
Identities = 22/79 (27%), Positives = 43/79 (54%)
Frame = +2
Query: 20 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRF 199
L+ + RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R
Sbjct: 10 LMPRSKRSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRT 68
Query: 200 SLRGSSIVLMGKNTMMRKA 256
S++G + + MGKN +MR A
Sbjct: 69 SMKGYARIFMGKNQLMRYA 87
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 42.3 bits (95), Expect = 0.016
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = -1
Query: 476 KKEVFSGPR--PVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMC 303
++ +F R PVL G T A P RAGA TL+ + S TS +SP V PTLP
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 302 GNSFSRAG--LLSRWSLM 255
G + G + S SLM
Sbjct: 66 GTRLRKTGFPVFSARSLM 83
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 42.3 bits (95), Expect = 0.016
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +1
Query: 286 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 459
L+ L +++G VG V T + + +L +K AP G +AP +V+P +TG+ P
Sbjct: 78 LDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDP 135
Score = 41.5 bits (93), Expect = 0.028
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 74 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRK 253
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 254 A 256
A
Sbjct: 70 A 70
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 41.5 bits (93), Expect = 0.028
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 313 GNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALS 489
G+ F+FT + ++ K+ + + APA+PG +A +V+PA +TGL P S F L
Sbjct: 93 GSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLK 152
Query: 490 IPTKI 504
I T +
Sbjct: 153 IKTMV 157
Score = 37.1 bits (82), Expect = 0.60
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 510 GTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVY 641
GTI I D + KPGD + A+LL L I+P + +K Y
Sbjct: 160 GTIHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAY 203
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 41.1 bits (92), Expect = 0.037
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 277 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 456
NP KL+ ++ V T + ++ L E+K AP + GAIAP + + + +TG+
Sbjct: 78 NPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMP 137
Query: 457 PEK-TSFFQALSIPTKISR 510
P S +A+ IP I +
Sbjct: 138 PGPFLSELKAVGIPAAIDK 156
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 39.1 bits (87), Expect = 0.15
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 328 VFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKI 504
+FT + E+ L + K + +PG IA +VIP NTGL P S F L IPT+I
Sbjct: 92 LFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRI 151
Score = 33.9 bits (74), Expect = 5.6
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 513 TIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGI 653
+I I D + KPGD + A+LL L+I+ + +K YD GI
Sbjct: 155 SIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKINIKAAYDHGI 201
>UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 1522
Score = 38.3 bits (85), Expect = 0.26
Identities = 25/68 (36%), Positives = 31/68 (45%)
Frame = +2
Query: 137 PKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRKASKTTWTTIQPSRNCCHTSRA 316
P A S + Q RG S+ +MGK +MR+AS T T+ PS TSR
Sbjct: 315 PSTDSTAAPGTSSSSVAQASLKSRGRSLSVMGKKKVMRRASTGTATSRPPS---AATSRR 371
Query: 317 TLASCSPA 340
SCS A
Sbjct: 372 PSVSCSAA 379
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 38.3 bits (85), Expect = 0.26
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 89 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRKA 256
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARS 66
Score = 37.1 bits (82), Expect = 0.60
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +1
Query: 286 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 462
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T L P
Sbjct: 72 MNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGP 131
Query: 463 KTSFFQALSIPTKI--SRVLLKSSTMYTS*SPVTKLEL 570
Q L IP+ I +V++K + + EL
Sbjct: 132 VVGELQNLGIPSGIDGGKVVVKQRKVAVEEGEIVSPEL 169
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 37.9 bits (84), Expect = 0.34
Identities = 26/81 (32%), Positives = 40/81 (49%)
Frame = +1
Query: 196 FLATWLQYRAHGKKHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLE 375
F T L RA G DAQ+ L+KL ++ G+VG +FT D E++D +
Sbjct: 67 FGKTKLTARALGTTPEDAQA--------DGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVN 118
Query: 376 NKVQAPARPGAIAPLSVVIPA 438
AR G++A ++ IP+
Sbjct: 119 LTQVDFARAGSVATRTITIPS 139
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 37.5 bits (83), Expect = 0.45
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +1
Query: 286 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--G 456
+EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA +TG+ G
Sbjct: 79 IEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAG 137
Query: 457 PEKTSFFQALSIPTKI 504
P S F L + TK+
Sbjct: 138 P-ILSVFGKLKVQTKV 152
Score = 33.1 bits (72), Expect = 9.8
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +2
Query: 83 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRKASK 262
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A+K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 263 TTWTTIQ 283
I+
Sbjct: 74 NAGIDIE 80
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 37.1 bits (82), Expect = 0.60
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 334 TRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP--AHNTGLGPEKTSFFQALSIPTKIS 507
T ++ ++ +E+KV P + G IAP +VIP N +GP +T +AL + TK++
Sbjct: 86 TNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTE-LRALGVKTKVT 144
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 37.1 bits (82), Expect = 0.60
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +2
Query: 89 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRKA 256
WK + +I + ++E+ +V + + Q+QQIR +LRG++ V M +NT++ A
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHA 66
Score = 33.5 bits (73), Expect = 7.4
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 304 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQ 480
H +G +FT + ++ L + K + A+PG AP +VIP T P Q
Sbjct: 80 HAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQ 139
Query: 481 ALSIPTKI 504
+ IP I
Sbjct: 140 QVGIPAAI 147
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 37.1 bits (82), Expect = 0.60
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 495 YQDFKGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFL 674
YQ G I I + + KPGD + A LL L I P G+ VK D G+ L
Sbjct: 153 YQVRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGGVLITEDLL 212
Query: 675 --DIQTRR 692
DI+ R
Sbjct: 213 RPDIEAFR 220
>UniRef50_A4CNC1 Cluster: Putative uncharacterized protein; n=2;
Flavobacteriales|Rep: Putative uncharacterized protein -
Robiginitalea biformata HTCC2501
Length = 1151
Score = 35.5 bits (78), Expect = 1.8
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = -1
Query: 632 LNNKTI*EWRDVQ-HVEKVGFRSSNFVTGLQDV--YIVDDFNSTLEILVGIERAWKKEVF 462
LNN TI +WRD+ E++ G D+ I+ DFN + + G +EV+
Sbjct: 155 LNNDTIHDWRDLTVEQEEIWRLEDTTGNGTADISTRILHDFNEEVTDVAGALLVDGEEVY 214
Query: 461 SGPRPVLWAGMTTDNG 414
G P +W +T +NG
Sbjct: 215 VGVAPDMWR-LTDENG 229
>UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein
kinase; n=8; Oryza sativa|Rep: Leucine rich repeat
containing protein kinase - Oryza sativa (Rice)
Length = 1074
Score = 34.7 bits (76), Expect = 3.2
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +1
Query: 253 SIKDHLDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 423
S+ L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 391 SVPRTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLS 450
Query: 424 V----VIPAHN--TGLGPEKTSFFQALSI 492
I HN G PEK S +L +
Sbjct: 451 ARLISFIADHNKLAGSLPEKMSNLSSLEL 479
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 34.7 bits (76), Expect = 3.2
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +1
Query: 262 DHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAH 441
D L ++L ++ G + V+T + ++ L K + A+ G IAP +VIP
Sbjct: 73 DSLPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKG 132
Query: 442 NTGLGP-EKTSFFQALSIPTKI--SRVLLKSS 528
T P FQ + IP I +V++K +
Sbjct: 133 PTSFKPGPLVGEFQQVGIPAGIEGGKVVIKDT 164
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 34.3 bits (75), Expect = 4.2
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 268 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 447
L ++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 448 GLGP-EKTSFFQALSIPTKI 504
P Q+ IP I
Sbjct: 131 SFSPGPMVGKLQSAGIPAAI 150
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 33.9 bits (74), Expect = 5.6
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 259 KDHLDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 435
K H D+ P L L ++KG +FT+ E+R++L + RPGA A +V I
Sbjct: 73 KTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIA 132
Query: 436 AHNTGLGPEKTS-FFQALSIPTKISR 510
+ P + L +P K+ R
Sbjct: 133 SGPLPKFPHTMEPVLRQLGMPVKLVR 158
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 33.9 bits (74), Expect = 5.6
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +2
Query: 110 KIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRKA 256
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERA 66
>UniRef50_UPI00006D0E10 Cluster: hypothetical protein
TTHERM_00070730; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00070730 - Tetrahymena
thermophila SB210
Length = 5422
Score = 33.5 bits (73), Expect = 7.4
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 265 HLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 360
+L NN L+KLLP I+G ++ RGDL E++
Sbjct: 831 NLANNEVLQKLLPIIEGKSLVLYERGDLKEIK 862
>UniRef50_Q19CV5 Cluster: Gp49 recombination endonuclease VII; n=3;
T4-like viruses|Rep: Gp49 recombination endonuclease VII
- Aeromonas phage 25
Length = 157
Score = 33.5 bits (73), Expect = 7.4
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -2
Query: 787 KSGLKA--ISWLPNWPKERSSYI-SNSSLETWHENLLV*MSKNFSAKNIPESYTCLTTRP 617
+SGLKA + ++ W + Y+ S+ S H N + M+KNFS KN+ E L R
Sbjct: 74 RSGLKAKDVDYI-QWMRSLLEYVDSDHSKNPIHPNYVSDMTKNFSRKNLSEMKAELRERG 132
Query: 616 YENGE 602
+E E
Sbjct: 133 FEFDE 137
>UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 245
Score = 33.5 bits (73), Expect = 7.4
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +2
Query: 29 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLR 208
K RS TLS+ K +I + +D+Y C++ ++ + ++++R R
Sbjct: 3 KSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQWR 62
Query: 209 GSSIVLMGKNTMMRKA 256
G+ GK +M KA
Sbjct: 63 GTGRFFFGKGKVMAKA 78
>UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 170
Score = 33.1 bits (72), Expect = 9.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 263 TTWTTIQPSRNCCHTSRATLASCSP---AETSLRSVTNCWRTKS 385
T WTT + T+ AT A+ + A ++ ++TN WRTKS
Sbjct: 107 TRWTTTAATTTTTATTAATTAAAATSTSASNAISTITNAWRTKS 150
>UniRef50_Q120Q7 Cluster: Mandelate racemase/muconate lactonizing
enzyme; n=4; Proteobacteria|Rep: Mandelate
racemase/muconate lactonizing enzyme - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 382
Score = 33.1 bits (72), Expect = 9.8
Identities = 20/87 (22%), Positives = 37/87 (42%)
Frame = -1
Query: 719 LQLGNLARKSSGLNVQEFQCKKYSRIIYLLNNKTI*EWRDVQHVEKVGFRSSNFVTGLQD 540
+ LG ++S QE+ + Y + + + + V+HV KV + +T
Sbjct: 141 IALGYQPKESLAEEAQEYIARGYKALKLRIGDAARVDIERVRHVRKVLGDEVDILTDANT 200
Query: 539 VYIVDDFNSTLEILVGIERAWKKEVFS 459
Y + D L +L I+ W +E F+
Sbjct: 201 AYTMADARRVLPVLAEIQAGWLEEPFA 227
>UniRef50_Q8IDM7 Cluster: DNA topoisomerase III, putative; n=2;
Plasmodium|Rep: DNA topoisomerase III, putative -
Plasmodium falciparum (isolate 3D7)
Length = 710
Score = 33.1 bits (72), Expect = 9.8
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = -2
Query: 199 ETDLLHLLRAHVIGTHDETFWVLVQELDDLNEVVRLPSSLVLPTHPG*CGVGTSMKFKD 23
E++LL L+ IGT D T ++ + N V++ SL +PT+ G V + KFKD
Sbjct: 583 ESNLLTLMDKFSIGT-DATMHEHIENIQKRNYVIKNSKSLFIPTNLGIALVQSYKKFKD 640
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 33.1 bits (72), Expect = 9.8
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 38 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSS 217
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 218 IVLMGKNTMMR 250
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 33.1 bits (72), Expect = 9.8
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 259 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP-ARPGAIAPLSVVIP 435
++H +N L KLL G VG +FT EV E+ VQ AR GA+AP + VIP
Sbjct: 83 EEHAENVSKLTKLL---HGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAVAPFTHVIP 138
Query: 436 A 438
A
Sbjct: 139 A 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,003,283,940
Number of Sequences: 1657284
Number of extensions: 22262388
Number of successful extensions: 66156
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 62885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66140
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -