Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30025X
         (414 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4ME15 Cluster: SecA-related protein; n=1; Burkholderia...    36   0.43 
UniRef50_Q8IAX7 Cluster: Putative uncharacterized protein MAL8P1...    31   7.1  

>UniRef50_A4ME15 Cluster: SecA-related protein; n=1; Burkholderia
           pseudomallei 305|Rep: SecA-related protein -
           Burkholderia pseudomallei 305
          Length = 725

 Score = 35.5 bits (78), Expect = 0.43
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = -1

Query: 366 CCKMLLQKFHYAVITNSFKASVQETIMKLYRFCAMST*QQLSS--PRSYFRTMMLDKKPK 193
           C K LL K H  +  +  + ++ E I ++Y FC +S      S   R + +T  +D+   
Sbjct: 392 CAKCLLDKRHKIIAVDGSEIALPERIQEIYLFCVVSDHYPALSFQSRQFLKTESVDRVQA 451

Query: 192 NLYTSCFV*DQLCKAKNASL 133
            L T  F  D + +   + L
Sbjct: 452 PLVTDVFTIDAMTEMLQSPL 471


>UniRef50_Q8IAX7 Cluster: Putative uncharacterized protein
           MAL8P1.93; n=2; Plasmodium|Rep: Putative uncharacterized
           protein MAL8P1.93 - Plasmodium falciparum (isolate 3D7)
          Length = 234

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -2

Query: 383 YIYIYNVVKCCYRNFITRLLQILLKHQYKKQS*SYTVFV 267
           YIYIY  VKC   N   R+  I   +++KK+    T FV
Sbjct: 82  YIYIYIYVKCIVANLELRMFIIKTSNKFKKEIEILTKFV 120


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,768,734
Number of Sequences: 1657284
Number of extensions: 5792033
Number of successful extensions: 9585
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9570
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)