Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30019
(576 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu... 114 2e-24
UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R... 111 1e-23
UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma... 89 5e-17
UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc... 68 2e-10
UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa... 56 8e-07
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 56 8e-07
UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell... 55 1e-06
UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu... 50 3e-05
UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n... 45 0.001
UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ... 37 0.30
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 36 0.90
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 35 1.6
UniRef50_P25370 Cluster: Good for full DBP5 activity protein 2; ... 35 1.6
UniRef50_Q9XTP8 Cluster: 205 kDa Pk1(B+)1+ SICAvar antigen; n=1;... 34 2.1
UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter... 34 2.1
UniRef50_Q7VCT6 Cluster: Predicted protein; n=1; Prochlorococcus... 33 4.8
UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge... 33 4.8
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 33 6.4
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 33 6.4
UniRef50_A6LCH3 Cluster: Putative ABC transporter permease; n=1;... 32 8.4
UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ... 32 8.4
UniRef50_A4HBZ9 Cluster: Putative uncharacterized protein; n=1; ... 32 8.4
>UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular
organisms|Rep: 40S ribosomal protein S14 - Homo sapiens
(Human)
Length = 151
Score = 114 bits (274), Expect = 2e-24
Identities = 54/71 (76%), Positives = 58/71 (81%)
Frame = +3
Query: 54 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 233
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 234 KVKADRDKRHP 266
KVKADRD+ P
Sbjct: 61 KVKADRDESSP 71
Score = 75.4 bits (177), Expect = 9e-13
Identities = 38/65 (58%), Positives = 42/65 (64%)
Frame = +2
Query: 287 QDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSD 466
QDVA++CK LGITALHIKLRA AQ MKIGRIEDVTP+PSD
Sbjct: 79 QDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSD 138
Query: 467 STRRR 481
STRR+
Sbjct: 139 STRRK 143
>UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep:
Ribosomal protein S14 - Palaemonetes pugio
Length = 77
Score = 111 bits (267), Expect = 1e-23
Identities = 53/68 (77%), Positives = 56/68 (82%)
Frame = +3
Query: 54 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 233
MAPRK K KEEVQV LGPQ GE VF V HI+AS+NDTFVHVTDLSGRETI RVTGG
Sbjct: 1 MAPRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQ 60
Query: 234 KVKADRDK 257
KVKADRD+
Sbjct: 61 KVKADRDE 68
>UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania
major|Rep: 40S ribosomal protein S14 - Leishmania major
Length = 203
Score = 89.4 bits (212), Expect = 5e-17
Identities = 42/62 (67%), Positives = 49/62 (79%)
Frame = +3
Query: 81 KEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDKR 260
K+EV+ GP G+ V+GV HIFASFNDTFVHVTD+SGRET +VTGGMKVKADRD+
Sbjct: 13 KQEVKA-YGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDES 71
Query: 261 HP 266
P
Sbjct: 72 SP 73
Score = 33.5 bits (73), Expect = 3.6
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 287 QDVAEKCKTLGITALHIKLRA 349
QDV +CK GI ALH+K+RA
Sbjct: 81 QDVVARCKECGINALHVKMRA 101
>UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S14 -
Ostreococcus tauri
Length = 243
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/65 (52%), Positives = 39/65 (60%)
Frame = +2
Query: 287 QDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSD 466
QDVA +CK LGITALHIK+RA Q +KIGRIEDVTP P+D
Sbjct: 126 QDVAARCKELGITALHIKMRAKGGNKTKSPGPGGQSALRALSRSGIKIGRIEDVTPTPTD 185
Query: 467 STRRR 481
STRR+
Sbjct: 186 STRRK 190
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +3
Query: 180 HVTDLSGRETIARVTGGMKVKADRDKRHP 266
HVTDLSG+ET++R TGGMKVKADRD+ P
Sbjct: 90 HVTDLSGKETLSRCTGGMKVKADRDESSP 118
Score = 48.8 bits (111), Expect = 9e-05
Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +3
Query: 63 RKNKVAKEEVQVT-LGPQHLVGETVFGVAHIFASFNDTFV 179
R V+ V T +GPQ GE VFGVAHIFASFNDTFV
Sbjct: 5 RHRSVSVRRVMATYVGPQAREGELVFGVAHIFASFNDTFV 44
>UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15;
Archaea|Rep: 30S ribosomal protein S11P - Methanococcus
jannaschii
Length = 129
Score = 55.6 bits (128), Expect = 8e-07
Identities = 21/44 (47%), Positives = 33/44 (75%)
Frame = +3
Query: 135 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDKRHP 266
+G+ HI++S+N+T +H TD++G ETIARV+GG + RD+ P
Sbjct: 9 WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSP 52
Score = 45.6 bits (103), Expect = 8e-04
Identities = 25/60 (41%), Positives = 30/60 (50%)
Frame = +2
Query: 293 VAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSDST 472
+AE K GI +HIK+RA AQ ++IGRIEDVTPVP D T
Sbjct: 62 LAEVLKERGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGT 121
>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S11P -
Cenarchaeum symbiosum
Length = 198
Score = 55.6 bits (128), Expect = 8e-07
Identities = 22/53 (41%), Positives = 37/53 (69%)
Frame = +3
Query: 108 PQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDKRHP 266
P+ + G+AHI++S+N+T +H+TDL+G ET++ +GG+ V ADR + P
Sbjct: 66 PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSP 118
Score = 46.4 bits (105), Expect = 5e-04
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +2
Query: 293 VAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSDST 472
V E + G T HI++RA AQ +IGRI+DVTP+P D+T
Sbjct: 128 VIESARAKGFTGFHIRVRAVGGVGSRVPGPGAQAAIRALARGGFRIGRIDDVTPIPHDTT 187
Query: 473 RRR 481
R++
Sbjct: 188 RKK 190
>UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella
natans|Rep: Ribosomal protein S14 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 145
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/68 (42%), Positives = 34/68 (50%)
Frame = +2
Query: 287 QDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSD 466
Q V+ CK LGI ALHIK+RA A KIGRIED TP P++
Sbjct: 63 QKVSNVCKVLGINALHIKIRARGGNASHLISTGAHTVVTTLVRLGFKIGRIEDTTPTPTN 122
Query: 467 STRRRVAE 490
TRR+ E
Sbjct: 123 GTRRKEFE 130
Score = 51.2 bits (117), Expect = 2e-05
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +3
Query: 132 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDKR 260
+FG+ HI ++ NDT +HVTD++G ETI+R++ G+ +DK+
Sbjct: 11 LFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKK 53
>UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured
euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 -
uncultured euryarchaeote ARMAN-2
Length = 169
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +3
Query: 135 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDKRHP 266
+ VAH+++S NDT + +TDLSG ETIA +GGM V AD + P
Sbjct: 46 WAVAHVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSP 89
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 293 VAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSDST 472
VA + K GIT ++I++RA AQ +++ RIEDVTP+P+D+T
Sbjct: 99 VAAEAKEKGITNINIEIRAPGGHGSKTPGHGAQAVVRVLARSGLRVNRIEDVTPIPTDTT 158
Query: 473 RR 478
RR
Sbjct: 159 RR 160
>UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry -
Rattus norvegicus
Length = 119
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +3
Query: 96 VTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGR-ETIARVTGGMKVK 242
++L PQ + G+ V GV +IFASF D+F++ TD+ G+ T VT MK +
Sbjct: 5 LSLRPQVVEGQNVLGVCYIFASFGDSFIYGTDVYGKVNTCQYVTSRMKTQ 54
>UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3;
Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein
S14 - Homo sapiens (Human)
Length = 350
Score = 37.1 bits (82), Expect = 0.30
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 287 QDVAEKCKTLGITALHIKLRA 349
QDV ++CK LGITALHIKL A
Sbjct: 20 QDVVQRCKELGITALHIKLLA 40
>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
organisms|Rep: 30S ribosomal protein S11 - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 134
Score = 35.5 bits (78), Expect = 0.90
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 138 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADR 251
G+AH+ ASFN+T + +TD G +GG K R
Sbjct: 24 GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR 61
>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
organisms|Rep: 30S ribosomal protein S11 - Shewanella
oneidensis
Length = 130
Score = 34.7 bits (76), Expect = 1.6
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 138 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADR 251
G+AHI ASFN+T V +TD G +GG + R
Sbjct: 20 GMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR 57
>UniRef50_P25370 Cluster: Good for full DBP5 activity protein 2;
n=2; Saccharomyces cerevisiae|Rep: Good for full DBP5
activity protein 2 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 566
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 114 HLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDKRHPTLL 275
H G + H+F F D V+ +SG + + +V G +KV +RD R P ++
Sbjct: 461 HNAGNDAYYTLHLFMKFCD--VNFRKISGMDDVLKVMGQVKVWGERDVREPKVV 512
>UniRef50_Q9XTP8 Cluster: 205 kDa Pk1(B+)1+ SICAvar antigen; n=1;
Plasmodium knowlesi|Rep: 205 kDa Pk1(B+)1+ SICAvar
antigen - Plasmodium knowlesi
Length = 1759
Score = 34.3 bits (75), Expect = 2.1
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1
Query: 283 GTGCSREMQNSWHNGLAHKAPCYWWKQNKDPWSWCSVCTSGS 408
GT NS NG H PC+W K +K W C + TSGS
Sbjct: 212 GTKPGTSCHNS--NGKEHCVPCHWDKDDK--WKDCKITTSGS 249
>UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48;
Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus
mutans
Length = 127
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 138 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADR 251
G+AHI A+FN+T V +TD+ G G + K R
Sbjct: 17 GIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR 54
>UniRef50_Q7VCT6 Cluster: Predicted protein; n=1; Prochlorococcus
marinus|Rep: Predicted protein - Prochlorococcus marinus
Length = 58
Score = 33.1 bits (72), Expect = 4.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 394 CTSGSCSFKYEDWPH*RCHPRTIRLD 471
C++ SCSF Y+DW H R H + D
Sbjct: 4 CSNRSCSFPYDDWHHCRIHRSKVTND 29
>UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_246, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 182
Score = 33.1 bits (72), Expect = 4.8
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 287 QDVAEKCKTLGITALHIKLRA 349
QDV+++CK L IT LH+KL A
Sbjct: 78 QDVSQECKELDITVLHVKLHA 98
>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 32.7 bits (71), Expect = 6.4
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 138 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADR 251
G+AHI ASFN+T V ++D SG + +G + + R
Sbjct: 32 GLAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSR 69
>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
protein S11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 138
Score = 32.7 bits (71), Expect = 6.4
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 138 GVAHIFASFNDTFVHVTDLSGR 203
GV H+ ASFN+T V VTD+ GR
Sbjct: 28 GVIHVQASFNNTIVTVTDVRGR 49
>UniRef50_A6LCH3 Cluster: Putative ABC transporter permease; n=1;
Parabacteroides distasonis ATCC 8503|Rep: Putative ABC
transporter permease - Parabacteroides distasonis
(strain ATCC 8503 / DSM 20701 / NCTC11152)
Length = 784
Score = 32.3 bits (70), Expect = 8.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 247 TVISVTLRCYVGGTGCSREMQNSWHNGLAHKAPCYWW 357
T I + C+V G + + + W A+K P YWW
Sbjct: 712 TYIRILCVCFVLGAPIAGYVVHRWLENFAYKTPMYWW 748
>UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus
oeni ATCC BAA-1163|Rep: Ribosomal protein S11 -
Oenococcus oeni ATCC BAA-1163
Length = 113
Score = 32.3 bits (70), Expect = 8.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 138 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADR 251
GVAHI ++FN+T V +TD +G G + K R
Sbjct: 22 GVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR 59
>UniRef50_A4HBZ9 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1371
Score = 32.3 bits (70), Expect = 8.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 322 YAKSFAFLCYILCRQHSSVG*RLSRSAFTFMPPVTRAIVSRPDKSVT 182
Y + + +L +HS G R+ + F F +++ +V RPD +VT
Sbjct: 1058 YLRKYVTSTTVLVEEHSGKGARICTAPFPFRCLISKQVVVRPDPTVT 1104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,215,352
Number of Sequences: 1657284
Number of extensions: 10645424
Number of successful extensions: 25773
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 24698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25763
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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