Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10397
(845 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bo... 182 8e-45
UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-P... 124 4e-27
UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic re... 120 6e-26
UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella ve... 117 3e-25
UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA... 115 2e-24
UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostel... 114 2e-24
UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic re... 114 3e-24
UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1; Schizosa... 107 3e-22
UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=... 107 5e-22
UniRef50_P49959 Cluster: Double-strand break repair protein MRE1... 105 1e-21
UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-... 103 7e-21
UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium ma... 102 1e-20
UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1; ... 102 1e-20
UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of s... 97 6e-19
UniRef50_P32829 Cluster: Double-strand break repair protein MRE1... 95 3e-18
UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep: M... 94 5e-18
UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosom... 93 6e-18
UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE1... 93 1e-17
UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of str... 92 1e-17
UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5; ... 91 2e-17
UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to endo/exonu... 91 3e-17
UniRef50_Q23255 Cluster: Double-strand break repair protein mre-... 90 7e-17
UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE1... 87 4e-16
UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break process... 86 1e-15
UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1; ... 86 1e-15
UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family prot... 84 4e-15
UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein... 83 1e-14
UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n... 79 1e-13
UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;... 78 2e-13
UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep: ... 71 3e-11
UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B ... 71 5e-11
UniRef50_Q4U965 Cluster: Double-strand break repair protein, put... 67 5e-10
UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, wh... 66 1e-09
UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family prote... 66 1e-09
UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1; ... 66 1e-09
UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative; ... 66 1e-09
UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1; E... 64 3e-09
UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium (Vinckei... 62 2e-08
UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1; ... 60 9e-08
UniRef50_Q74CF0 Cluster: Nuclease SbcCD, D subunit, putative; n=... 35 2.2
UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily, pu... 35 2.2
UniRef50_Q22U51 Cluster: Chitin recognition protein; n=2; Eukary... 34 5.2
UniRef50_Q6C3T9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 6.8
UniRef50_Q9A4M3 Cluster: Tryptophan halogenase, putative; n=6; A... 33 9.0
>UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 -
Bombyx mori (Silk moth)
Length = 610
Score = 182 bits (444), Expect = 8e-45
Identities = 89/108 (82%), Positives = 93/108 (86%)
Frame = +2
Query: 2 ELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGK 181
ELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGK
Sbjct: 94 ELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGK 153
Query: 182 WTDYTHVRISPVLLQKGLTRLALYDLAI*KIRDFHVFLLKKKWKWRDP 325
WTDYTHVRISPVLLQKGLTRLALY L+ K + +KK + P
Sbjct: 154 WTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERP 201
Score = 179 bits (436), Expect = 7e-44
Identities = 81/85 (95%), Positives = 81/85 (95%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLV 435
LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLP F V
Sbjct: 179 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLPTFRS-V 237
Query: 436 VWGHEHDSHICPMKGNKTEKDSFFV 510
VWGHEHDSHICPMKGNKTEKDSFFV
Sbjct: 238 VWGHEHDSHICPMKGNKTEKDSFFV 262
Score = 153 bits (372), Expect = 4e-36
Identities = 73/87 (83%), Positives = 77/87 (88%)
Frame = +3
Query: 474 EGK*NRERQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKT 653
+G + F VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKT
Sbjct: 251 KGNKTEKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKT 310
Query: 654 IVLSEENIGSEDVNENEKVQEFLKTEL 734
IVLSEENIGS+DVNENEKVQEFLK +
Sbjct: 311 IVLSEENIGSDDVNENEKVQEFLKNRV 337
Score = 53.2 bits (122), Expect = 8e-06
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 757 KAKTADLRQPLLPLIRLSIFYERESQ 834
K KTADLRQPLLPLIRLSIFYERESQ
Sbjct: 346 KLKTADLRQPLLPLIRLSIFYERESQ 371
>UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-PA -
Drosophila melanogaster (Fruit fly)
Length = 620
Score = 124 bits (298), Expect = 4e-27
Identities = 63/108 (58%), Positives = 81/108 (75%), Gaps = 4/108 (3%)
Frame = +2
Query: 2 ELLSDQIKNF----SRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 169
E+LSDQ + F +++VNYEDPNLNI+ P+ SIHGNHDDP G G +SSLD+LS +GLVN
Sbjct: 94 EILSDQGQCFHNAVNQSVNYEDPNLNIAIPVFSIHGNHDDPSGFGRLSSLDLLSTSGLVN 153
Query: 170 YFGKWTDYTHVRISPVLLQKGLTRLALYDLAI*KIRDFHVFLLKKKWK 313
YFG+WTD T V ISPVL++KG ++LALY L+ I D + L K +K
Sbjct: 154 YFGRWTDLTQVEISPVLMRKGESQLALYGLS--HIHDGRLARLIKDFK 199
Score = 86.2 bits (204), Expect = 9e-16
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 12/89 (13%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPD------------ETLDWFNLFVLHQNHADRGHSNYI 399
LSH+ D RL+RL + KV+ P+ E DWF+L V+HQN ADRG NY+
Sbjct: 183 LSHIHDGRLARLIKDFKVKFNCPENVANGEDGNESKEEEDWFHLLVVHQNRADRGPKNYL 242
Query: 400 PEGVLPNFLDLVVWGHEHDSHICPMKGNK 486
PE +LP+FL LV+WGHEHD I P + K
Sbjct: 243 PEDLLPSFLHLVIWGHEHDCRIEPEENAK 271
Score = 86.2 bits (204), Expect = 9e-16
Identities = 40/91 (43%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 486 NRERQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLS 665
N +++ + QPGS+V TSL+ GEA KH GLLEI+KG FKL PLPL+TVRPF+++++VL+
Sbjct: 269 NAKKRFYVSQPGSSVPTSLSEGEAKKKHVGLLEIYKGKFKLKPLPLETVRPFVYESVVLA 328
Query: 666 E--ENIGSEDVNENEKVQEFLKTELMKLLMR 752
+ + +G + + + KV +F + + ++ R
Sbjct: 329 DHADELGLVEGDASTKVFKFAQERVEAMIER 359
>UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11) - Nasonia
vitripennis
Length = 664
Score = 120 bits (288), Expect = 6e-26
Identities = 48/76 (63%), Positives = 63/76 (82%)
Frame = +2
Query: 35 RTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISP 214
+ VN+EDPNLN+ P+ SIHGNHDDP G G+V S+D+LS TGL+NYFGKWTD T V I+P
Sbjct: 130 KVVNFEDPNLNVGIPVFSIHGNHDDPTGYGAVGSMDVLSATGLINYFGKWTDVTQVSIAP 189
Query: 215 VLLQKGLTRLALYDLA 262
+L++KG+T +ALY L+
Sbjct: 190 LLIRKGVTTIALYGLS 205
Score = 88.2 bits (209), Expect = 2e-16
Identities = 40/80 (50%), Positives = 52/80 (65%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLV 435
LS++ DQRLSRL K M R D+ D FN+FVLHQN A ++Y+PE +LP+F++LV
Sbjct: 204 LSYMNDQRLSRLMRNNKFHMLRTDKADDPFNIFVLHQNRAMHSQNSYVPENLLPDFINLV 263
Query: 436 VWGHEHDSHICPMKGNKTEK 495
VWGHEH+ I P K
Sbjct: 264 VWGHEHECLIEPQHSKLNPK 283
Score = 65.3 bits (152), Expect = 2e-09
Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 510 VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIG-SE 686
+QPGS+VATSLA GE++ K +L I K FK+ L L+TVRPF+F+ +VL++ N S
Sbjct: 287 MQPGSSVATSLAQGESVEKKVAILNIFKSKFKMNYLKLKTVRPFVFEDLVLNDYNDEISS 346
Query: 687 DVNENEKVQEFLKTELMKLLM 749
+ + V+EF+ + L+
Sbjct: 347 YKSRQDAVEEFVDNYIENTLI 367
>UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 720
Score = 117 bits (282), Expect = 3e-25
Identities = 57/112 (50%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Frame = +2
Query: 2 ELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 169
E LSDQ NF+ VNYEDPNLN+S P+ SIHGNHDDP G+G++ +LD+LS+ GLVN
Sbjct: 130 EFLSDQSINFANNRFPWVNYEDPNLNVSIPVFSIHGNHDDPAGEGNLCALDLLSVCGLVN 189
Query: 170 YFGKWTDYTHVRISPVLLQKGLTRLALYDLAI*KIRDFHVFLLKKKWKWRDP 325
YFG+ + +SP+LLQKG T+LALY L + H + K K P
Sbjct: 190 YFGRPASVDDITVSPLLLQKGATKLALYGLGSVRDERLHRTFVNNKVKMLRP 241
Score = 96.7 bits (230), Expect = 6e-19
Identities = 45/79 (56%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
L ++D+RL R F KV+M RP E D WFN FVLHQN A GH+NYIPE L FLDL
Sbjct: 219 LGSVRDERLHRTFVNNKVKMLRPKEDPDSWFNAFVLHQNRAKHGHTNYIPEKFLDTFLDL 278
Query: 433 VVWGHEHDSHICPMKGNKT 489
VVWGHEH+ I P + + T
Sbjct: 279 VVWGHEHECLIDPRQSDDT 297
Score = 73.7 bits (173), Expect = 5e-12
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +3
Query: 513 QPGSTVATSLAAGEALPKHCGLLEIHKGN-FKLTPLPLQTVRPFIFKTIVLSEENIGSED 689
QPGSTVATSL+ GE+ KH G+LEI FK+T +PLQTVRPF + I+LS+ ++ D
Sbjct: 305 QPGSTVATSLSPGESKQKHVGILEIRPDKAFKMTKVPLQTVRPFYMEDIILSDTDL---D 361
Query: 690 VNENEKVQEFLKTELMKLLMRLQ 758
+ E++ FL ++ +L+ R +
Sbjct: 362 PADEERIYAFLTDKVEQLISRAE 384
>UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG16928-PA - Tribolium castaneum
Length = 555
Score = 115 bits (276), Expect = 2e-24
Identities = 55/95 (57%), Positives = 70/95 (73%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 ELLSDQIKNF--SRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYF 175
E SD +F + +VNYEDPN+N+S PI SIHGNHDDP G+ VS+LD+ S GLVNYF
Sbjct: 88 EFFSDPSLHFPGNASVNYEDPNINVSIPIFSIHGNHDDPTGKNHVSALDLFSSMGLVNYF 147
Query: 176 GKWTDYTHVRISPVLLQKGLTRLALYDLAI*KIRD 280
G+W D T V I+P+LL+KG ++LALY L+ IRD
Sbjct: 148 GRWDDVTKVEINPILLKKGDSKLALYGLS--HIRD 180
Score = 101 bits (243), Expect = 2e-20
Identities = 40/72 (55%), Positives = 56/72 (77%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLV 435
LSH++D+RL+RLF +KKV + P++ DWFN+F+LHQN A+RG N+I + +P F+DLV
Sbjct: 175 LSHIRDERLARLFLDKKVVTKTPEDLNDWFNVFILHQNRANRGAKNFIADSFIPEFIDLV 234
Query: 436 VWGHEHDSHICP 471
+WGHEHD I P
Sbjct: 235 MWGHEHDCRIEP 246
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = +3
Query: 504 FCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGS 683
+ QPGS+VATSLA GEAL K GLL + NF L P+ LQTVRPFIF + + +
Sbjct: 255 YITQPGSSVATSLAEGEALTKKIGLLRVCGKNFNLHPIELQTVRPFIFSCLSIEPPENFA 314
Query: 684 EDVNENEKVQEFLKTELMKLL 746
+ +E+ + ++ ++ ++
Sbjct: 315 GKIAHSERTKILVREKIESMI 335
>UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostelium
discoideum AX4|Rep: DNA repair exonuclease -
Dictyostelium discoideum AX4
Length = 689
Score = 114 bits (275), Expect = 2e-24
Identities = 56/113 (49%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
Frame = +2
Query: 2 ELLSDQIKNFSR---TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNY 172
+ LSDQ NFS TVNYEDPN NIS PI SIHGNHDDP G+G +++LD+LS++ LVNY
Sbjct: 122 QFLSDQSVNFSNQFHTVNYEDPNFNISLPIFSIHGNHDDPTGEGGLAALDLLSVSNLVNY 181
Query: 173 FGKWTDYTHVRISPVLLQKGLTRLALYDLAI*KIRDFHVFLLKKKWKWRDPMK 331
FGK D + + P+LL KG T++A+Y L + H K+ K P++
Sbjct: 182 FGKTEDIDDITVYPLLLGKGETKIAIYGLGNIRDERLHRTFQKQSVKLMRPVE 234
Score = 76.6 bits (180), Expect = 7e-13
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
L +++D+RL R F ++ V++ RP E+ D WFN+ VLHQN NY+ E ++ +F+D
Sbjct: 210 LGNIRDERLHRTFQKQSVKLMRPVESKDEWFNILVLHQNRVAHNPKNYVHEKMIESFIDF 269
Query: 433 VVWGHEHDSHICPMKGNKTE 492
V+WGHEH+ + P + E
Sbjct: 270 VLWGHEHECLVNPQASSVGE 289
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +3
Query: 513 QPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGSEDV 692
QPGS+VAT+L+ GE+ K GLLE++K F+ P PL TVRPFI I+L+ NI
Sbjct: 294 QPGSSVATALSEGESKDKFVGLLEVYKNQFRFKPFPLNTVRPFIMDQIILANSNIHPTQQ 353
Query: 693 NE 698
N+
Sbjct: 354 ND 355
>UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic
recombination 11 CG16928-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to meiotic recombination 11
CG16928-PA - Apis mellifera
Length = 501
Score = 114 bits (274), Expect = 3e-24
Identities = 48/76 (63%), Positives = 63/76 (82%)
Frame = +2
Query: 35 RTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISP 214
+TVNYEDPNLNIS PI SIHGNHDDP G++ S+D+LS++GL+NYFGKWTD T + I P
Sbjct: 115 KTVNYEDPNLNISMPIFSIHGNHDDP-SFGAIGSMDLLSVSGLINYFGKWTDLTKINIPP 173
Query: 215 VLLQKGLTRLALYDLA 262
++++KG T +ALY L+
Sbjct: 174 LIIKKGETHIALYGLS 189
Score = 92.3 bits (219), Expect = 1e-17
Identities = 39/72 (54%), Positives = 50/72 (69%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLV 435
LS++ DQRLSRL + K++M RP E D FN+FVLHQN A YIP+ LP FL+L+
Sbjct: 188 LSYINDQRLSRLLRDFKIDMLRPTEITDCFNIFVLHQNRAKHDEYTYIPQNKLPKFLNLI 247
Query: 436 VWGHEHDSHICP 471
+WGHEH+ I P
Sbjct: 248 IWGHEHECRITP 259
Score = 75.4 bits (177), Expect = 2e-12
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 498 QLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENI 677
+ F QPGS++ATSL GE+ PKH G+L ++K FKL L LQTVRPFIF ++L +E I
Sbjct: 266 EYFISQPGSSIATSLCEGESKPKHIGILTVNKMKFKLEKLKLQTVRPFIFDNLILKDEEI 325
Query: 678 GSEDVNE-NEKVQEFLKTELMKLLM 749
+E + +F+ + LM
Sbjct: 326 PKNYAERLSESIFKFIDNYIQNELM 350
>UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rad32
- Schizosaccharomyces pombe (Fission yeast)
Length = 649
Score = 107 bits (257), Expect = 3e-22
Identities = 51/101 (50%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Frame = +2
Query: 2 ELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 169
ELLSD T +NY DPN+N++ P+ SIHGNHDDP G G S+LDIL +TGLVN
Sbjct: 97 ELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVN 156
Query: 170 YFGKWTDYTHVRISPVLLQKGLTRLALYDLAI*KIRDFHVF 292
YFG+ + ++ +SP+LLQKG T+LALY ++ +RD ++
Sbjct: 157 YFGRVPENDNIVVSPILLQKGFTKLALYGIS--NVRDERLY 195
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
+S+++D+RL F E KV+ RPD D WFNL +HQNH+ ++Y+PE + +F D
Sbjct: 186 ISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLPESFIQDFYDF 245
Query: 433 VVWGHEHDSHICPMKGNKTEKDSFFV 510
V+WGHEH+ C + G+ F V
Sbjct: 246 VLWGHEHE---CLIDGSYNPTQKFTV 268
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = +3
Query: 474 EGK*NRERQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKT 653
+G N ++ VQPGST+ATSL+ GE PKHCG+L I +F L + L+TVRPFI K
Sbjct: 257 DGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKD 316
Query: 654 IVLSEENIGSEDVNENEKVQEFL 722
I+LSE + V ++V +L
Sbjct: 317 IILSEVSSIPPMVENKKEVLTYL 339
>UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=14;
Pezizomycotina|Rep: Meiotic recombination protein Mre11
- Aspergillus clavatus
Length = 816
Score = 107 bits (256), Expect = 5e-22
Identities = 49/100 (49%), Positives = 73/100 (73%), Gaps = 3/100 (3%)
Frame = +2
Query: 2 ELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNY 172
E+LSD +NF VNYED ++N++ PI SIHGNHDDP G+G +++LD+L ++GL+NY
Sbjct: 106 EMLSDASENFQGAFNHVNYEDLDINVAIPIFSIHGNHDDPSGEGHLAALDLLQVSGLLNY 165
Query: 173 FGKWTDYTHVRISPVLLQKGLTRLALYDLAI*KIRDFHVF 292
+G+ + ++ I PVLLQKG T+LALY ++ +RD +F
Sbjct: 166 YGRTPESDNIHIKPVLLQKGRTKLALYGMS--NVRDERLF 203
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPD-ETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
+S+++D+RL R F + KV+ +P + DWFNL +HQNH + Y+PE LP FLDL
Sbjct: 194 MSNVRDERLFRTFRDGKVKFYQPSIQKNDWFNLMCVHQNHHAYTETGYLPENFLPEFLDL 253
Query: 433 VVWGHEHDSHICPMKGNKTE 492
V+WGHEH+ I P +T+
Sbjct: 254 VIWGHEHECLINPTLNPETK 273
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +3
Query: 486 NRERQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLS 665
N E + +QPGS+VATSL GEA+PK +L I FK P+ L++VRPF + IVLS
Sbjct: 269 NPETKFHVMQPGSSVATSLVPGEAVPKQVAILSITGREFKCEPIRLKSVRPFAIREIVLS 328
Query: 666 EENIGSEDVNENE 704
EE G++ + E
Sbjct: 329 EEK-GAQKLARKE 340
>UniRef50_P49959 Cluster: Double-strand break repair protein MRE11A;
n=42; Deuterostomia|Rep: Double-strand break repair
protein MRE11A - Homo sapiens (Human)
Length = 708
Score = 105 bits (252), Expect = 1e-21
Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 5/106 (4%)
Frame = +2
Query: 2 ELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 169
E+LSDQ NF + VNY+D NLNIS P+ SIHGNHDDP G ++ +LDILS G VN
Sbjct: 92 EILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVN 151
Query: 170 YFGKWTDYTHVRISPVLLQKGLTRLALYDL-AI*KIRDFHVFLLKK 304
+FG+ + ISPVLLQKG T++ALY L +I R + +F+ KK
Sbjct: 152 HFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKK 197
Score = 92.3 bits (219), Expect = 1e-17
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
L + D+RL R+F KKV M RP E + WFNLFV+HQN + G +N+IPE L +F+DL
Sbjct: 181 LGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDL 240
Query: 433 VVWGHEHDSHICPMKGNKTEKDSFFV 510
V+WGHEH+ I P K E+ F++
Sbjct: 241 VIWGHEHECKIAP---TKNEQQLFYI 263
Score = 59.7 bits (138), Expect = 9e-08
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = +3
Query: 492 ERQLFCV-QPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSE 668
E+QLF + QPGS+V TSL+ GEA+ KH GLL I + +PL TVR F + IVL+
Sbjct: 257 EQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDIVLAN 316
Query: 669 --ENIGSEDVNENEKVQEFLKTELMKLL 746
+ ++ + +Q F ++ ++L
Sbjct: 317 HPDIFNPDNPKVTQAIQSFCLEKIEEML 344
>UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-23;
n=5; Pezizomycotina|Rep: Double-strand break repair
protein mus-23 - Neurospora crassa
Length = 760
Score = 103 bits (246), Expect = 7e-21
Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Frame = +2
Query: 2 ELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNY 172
E LSD + F VNYEDP++N++ P+ SIHGNHDDP G G SLD+L GLVNY
Sbjct: 109 EFLSDAAEVFEGAFPFVNYEDPDINVAIPVFSIHGNHDDPSGDGHYCSLDLLQAAGLVNY 168
Query: 173 FGKWTDYTHVRISPVLLQKGLTRLALYDLAI*KIRD 280
FG+ + ++ + P+LLQKG T++ALY L+ +RD
Sbjct: 169 FGRVPEADNIHVKPILLQKGRTKMALYGLS--NVRD 202
Score = 87.8 bits (208), Expect = 3e-16
Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETL-DWFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
LS+++D+R+ R F + KV RP++ DWFNL LHQNH ++Y+ E +LP+F+DL
Sbjct: 197 LSNVRDERMHRTFRDNKVRFYRPNQQKNDWFNLLALHQNHYAHTRTSYVAENMLPDFMDL 256
Query: 433 VVWGHEHDSHICPMKGNKT 489
V+WGHEH+ I P++ +T
Sbjct: 257 VIWGHEHECLIDPVRNPET 275
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 486 NRERQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLS 665
N E +QPGS+VATSL GEA+PKH +L I F++ +PL+TVRPF+ + IVL+
Sbjct: 272 NPETGFHVMQPGSSVATSLVPGEAVPKHVAILNITGRKFEVDKIPLKTVRPFVTREIVLA 331
Query: 666 EE 671
+
Sbjct: 332 SD 333
>UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium
marneffei|Rep: MRE11-like protein - Penicillium
marneffei
Length = 731
Score = 102 bits (245), Expect = 1e-20
Identities = 43/84 (51%), Positives = 66/84 (78%)
Frame = +2
Query: 41 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 220
VNYED ++N++ P+ SIHGNHDDP G+G +++LDIL ++GL+NY+G+ + ++++ PVL
Sbjct: 93 VNYEDLDINVAIPVFSIHGNHDDPSGEGHLAALDILQVSGLLNYYGRTPESDNIQVKPVL 152
Query: 221 LQKGLTRLALYDLAI*KIRDFHVF 292
LQKG T+LALY L+ +RD +F
Sbjct: 153 LQKGRTKLALYGLS--NVRDERLF 174
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPD-ETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
LS+++D+RL R F + KV+ +P + DWFNL +HQNH + Y+PE LP FLDL
Sbjct: 165 LSNVRDERLFRTFRDGKVKFFQPSVQKEDWFNLICVHQNHHAYTETGYLPENFLPEFLDL 224
Query: 433 VVWGHEHDSHICPMKGNKT 489
V+WGHEH+ I P +T
Sbjct: 225 VIWGHEHECLIDPKLNPET 243
>UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 669
Score = 102 bits (245), Expect = 1e-20
Identities = 50/98 (51%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
Frame = +2
Query: 2 ELLSDQIKNFSR---TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNY 172
ELLS+ + S VNYEDPNLNIS P+ +I+GNHDD G+G +S+LD+L+++GL+NY
Sbjct: 93 ELLSEPGETMSNGFDEVNYEDPNLNISVPVFAINGNHDDATGEGMLSALDVLAVSGLINY 152
Query: 173 FGKWTDYTH--VRISPVLLQKGLTRLALYDLAI*KIRD 280
FGK D H + P+LLQKG T+ ALY ++ +RD
Sbjct: 153 FGKTRDNNHDTYLVKPILLQKGSTKFALYGMS--NVRD 188
Score = 75.4 bits (177), Expect = 2e-12
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPD-ETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
+S+++D++L RLF + +V ERP T +WFN HQNHA + IPE LP+FL
Sbjct: 183 MSNVRDEKLHRLFRDGEVRFERPGLHTDEWFNFLAFHQNHAVHTFKSSIPENYLPHFLHF 242
Query: 433 VVWGHEHD 456
++WGHEH+
Sbjct: 243 ILWGHEHE 250
Score = 54.0 bits (124), Expect = 5e-06
Identities = 31/87 (35%), Positives = 50/87 (57%)
Frame = +3
Query: 486 NRERQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLS 665
N E +Q GS+VATSLA GE K ++ + ++ L LPL+TVRPF+ + IVL
Sbjct: 258 NPETGFDVLQAGSSVATSLAEGEVADKKVFVMRVRGKDYTLEALPLETVRPFVLREIVLL 317
Query: 666 EENIGSEDVNENEKVQEFLKTELMKLL 746
+ ++ ++ + V FL +E+ K +
Sbjct: 318 KTDLVPGAASKGD-VIAFLTSEVEKAI 343
>UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 688
Score = 96.7 bits (230), Expect = 6e-19
Identities = 43/81 (53%), Positives = 60/81 (74%)
Frame = +2
Query: 38 TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPV 217
TVNYEDPN+NIS P+ +I GNHDD G+G + LD+LS +GL+N+FGK + + +SP+
Sbjct: 108 TVNYEDPNINISVPVFAISGNHDDATGEGFLLPLDLLSASGLINHFGKVPNNEELTVSPL 167
Query: 218 LLQKGLTRLALYDLAI*KIRD 280
+ QKG ++LALY LA +RD
Sbjct: 168 IFQKGASKLALYGLA--NVRD 186
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
L++++D+RL RLF + V+ RP D WFN+ +HQNH ++Y+PE LP FL+
Sbjct: 181 LANVRDERLHRLFRDGNVKFLRPSSQADEWFNILCVHQNHVPHTRTSYLPEQFLPKFLNF 240
Query: 433 VVWGHEHDSHICPMKGNKTEKDS 501
VVWGHEH+ P+ T D+
Sbjct: 241 VVWGHEHECIPIPVFNPDTGFDT 263
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/81 (34%), Positives = 51/81 (62%)
Frame = +3
Query: 510 VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGSED 689
+QPGS+VATSL EA+ K+ +L I+K + + + L+TVRPFI + L +E S
Sbjct: 264 LQPGSSVATSLCEAEAVEKNIFILNINKSKYSIETIKLKTVRPFIMDEVSLLKERFISGP 323
Query: 690 VNENEKVQEFLKTELMKLLMR 752
++++ + +FL ++ +L+ +
Sbjct: 324 ASKDD-ISKFLTFKIEELVKK 343
>UniRef50_P32829 Cluster: Double-strand break repair protein MRE11;
n=9; Saccharomycetales|Rep: Double-strand break repair
protein MRE11 - Saccharomyces cerevisiae (Baker's yeast)
Length = 692
Score = 94.7 bits (225), Expect = 3e-18
Identities = 49/101 (48%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
Frame = +2
Query: 2 ELLSD--QIKNFSR--TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 169
ELLSD Q+ ++ VNYEDPN NIS P+ I GNHDD G + +DIL TGL+N
Sbjct: 88 ELLSDPSQVFHYDEFTNVNYEDPNFNISIPVFGISGNHDDASGDSLLCPMDILHATGLIN 147
Query: 170 YFGKWTDYTHVRISPVLLQKGLTRLALYDLAI*KIRDFHVF 292
+FGK + +++ P+L QKG T+LALY LA +RD +F
Sbjct: 148 HFGKVIESDKIKVVPLLFQKGSTKLALYGLA--AVRDERLF 186
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 202 KNITSTFAKRSYEARPL*LSHLKDQRLSRLFAEKKVEMERPD-ETLDWFNLFVLHQNHAD 378
K + F K S + L+ ++D+RL R F + V E P +WFNL +HQNH
Sbjct: 159 KVVPLLFQKGSTKLALYGLAAVRDERLFRTFKDGGVTFEVPTMREGEWFNLMCVHQNHTG 218
Query: 379 RGHSNYIPEGVLPNFLDLVVWGHEHD 456
++ ++PE LP+FLD+V+WGHEH+
Sbjct: 219 HTNTAFLPEQFLPDFLDMVIWGHEHE 244
Score = 54.8 bits (126), Expect = 3e-06
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +3
Query: 510 VQPGSTVATSLAAGEALPKHCGLLEIHKGNF-KLTPLPLQTVRPFIFKTIVLSE 668
+QPGS+VATSL EA PK+ +L+I G K+TP+PL+T+R F K+I L +
Sbjct: 260 LQPGSSVATSLCEAEAQPKYVFILDIKYGEAPKMTPIPLETIRTFKMKSISLQD 313
>UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep:
Mre11 protein - Ostreococcus tauri
Length = 1229
Score = 93.9 bits (223), Expect = 5e-18
Identities = 45/100 (45%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
Frame = +2
Query: 41 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWT----DYTHVRI 208
VNYEDP+ N+ P+ SIHGNHDDP G+ ++S++D+L+ G+VNYFGK +V +
Sbjct: 584 VNYEDPHTNVELPVFSIHGNHDDPAGERNLSAMDVLASAGVVNYFGKHALAGGGTGNVDL 643
Query: 209 SPVLLQKGLTRLALYDLAI*KIRDFH-VFLLKKKWKWRDP 325
PVLL+KG T++ALY L + H +F +K +W P
Sbjct: 644 KPVLLRKGTTKVALYGLGYIRDNRLHQMFSVKGCVRWHRP 683
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKK-VEMERPDETLD-----WFNLFVLHQNHADRGHS-NYIPEGVL 414
L +++D RL ++F+ K V RP ET D WFN+ ++HQN A HS N I E L
Sbjct: 660 LGYIRDNRLHQMFSVKGCVRWHRPAETEDCSSSSWFNVMLIHQNRA--AHSKNAISERYL 717
Query: 415 PNFLDLVVWGHEHDSHICPMKGNK 486
P++LD V+WGHEH+ + P + +
Sbjct: 718 PSWLDFVIWGHEHECLVEPTESTQ 741
Score = 37.9 bits (84), Expect = 0.32
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Frame = +3
Query: 513 QPGSTVATSLAAGEALPKHCGLLEIHKG--------NFKLTPLPLQTVRPFIFKTIVLS 665
QPGS+V TSL GEA K +LE+ ++ TP+PL + RPF F+ + L+
Sbjct: 747 QPGSSVVTSLIEGEAKEKKICVLEVRSDPENPNSAPYWRATPIPLLSSRPFEFEQMSLA 805
>UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosoma
brucei|Rep: Endo/exonuclease Mre11 - Trypanosoma brucei
Length = 763
Score = 93.5 bits (222), Expect = 6e-18
Identities = 49/96 (51%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Frame = +2
Query: 5 LLSDQIKNFSR----TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNY 172
LLSD +NF N++DPN+N++ PI IHGNHDDPVG SS+DILS GLVNY
Sbjct: 119 LLSDPKRNFPTHPVPLANFQDPNINVALPIFMIHGNHDDPVG--GTSSIDILSTAGLVNY 176
Query: 173 FGKWTDYTHVRISPVLLQKGLTRLALYDLAI*KIRD 280
FG + + + PVLL+KG T +ALY L +RD
Sbjct: 177 FGHTSSLDDIVVEPVLLKKGDTYIALYGLG--NVRD 210
Score = 61.3 bits (142), Expect = 3e-08
Identities = 27/79 (34%), Positives = 53/79 (67%)
Frame = +3
Query: 510 VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGSED 689
+QPGST+ TSL+ E PK G+LE+ G++++T PL+++RP + +T+ L +N G
Sbjct: 291 IQPGSTILTSLSEHECNPKKYGVLEVRGGSYRVTGFPLRSIRPVVRRTVELWRDNPGCRT 350
Query: 690 VNENEKVQEFLKTELMKLL 746
+ + V++FL++ + +++
Sbjct: 351 L---DAVEDFLRSVVEQMI 366
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERP--DETLDWFNLFVLHQNHADRGHSNY---IPEGVLPN 420
L +++D RL R F KK+ +P + DWF + + HQN R N I E +L
Sbjct: 205 LGNVRDDRLHRCFRMKKLHFVQPKTEPGKDWFKILLFHQNRGVRSGGNMKCGIYETMLAG 264
Query: 421 F-LDLVVWGHEHDSHICP 471
+DLV+WG+EH+ + P
Sbjct: 265 HGMDLVIWGNEHEQQMEP 282
>UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE11;
n=14; Magnoliophyta|Rep: Double-strand break repair
protein MRE11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 720
Score = 92.7 bits (220), Expect = 1e-17
Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 7/100 (7%)
Frame = +2
Query: 2 ELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNY 172
+++SDQ NF VNYEDP+ N+ P+ SIHGNHDDP G ++S++DILS LVNY
Sbjct: 89 QVVSDQTVNFQNAFGQVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAIDILSACNLVNY 148
Query: 173 FGKW----TDYTHVRISPVLLQKGLTRLALYDLAI*KIRD 280
FGK + + + P+L++KG T +ALY L IRD
Sbjct: 149 FGKMVLGGSGVGQITLYPILMKKGSTTVALYGLG--NIRD 186
Score = 70.9 bits (166), Expect = 4e-11
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +1
Query: 256 LSHLKDQRLSRLF-AEKKVEMERPD-----ETLDWFNLFVLHQNHADRGHSNYIPEGVLP 417
L +++D+RL+R+F V+ RP+ + DWFN+ VLHQN N I E LP
Sbjct: 181 LGNIRDERLNRMFQTPHAVQWMRPEVQEGCDVSDWFNILVLHQNRVKSNPKNAISEHFLP 240
Query: 418 NFLDLVVWGHEHDSHICPMK 477
FLD +VWGHEH+ I P +
Sbjct: 241 RFLDFIVWGHEHECLIDPQE 260
Score = 62.9 bits (146), Expect = 1e-08
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = +3
Query: 513 QPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGSEDV 692
QPGS+VATSL GE+ PKH LLEI ++ T +PL +VRPF + IVL +E+ D
Sbjct: 270 QPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLTSVRPFEYTEIVLKDES--DIDP 327
Query: 693 NENEKVQEFLKTELMKLL 746
N+ + E L + L+
Sbjct: 328 NDQNSILEHLDKVVRNLI 345
>UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 701
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Frame = +2
Query: 2 ELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNY 172
ELLSD +T +NYEDPN+N+S P+ +I GNHDD G + D+L+ TGL+N+
Sbjct: 88 ELLSDPTLALDQTFNHLNYEDPNINVSVPVFAISGNHDDSGGDAMLCPNDVLAATGLINH 147
Query: 173 FGKWTDYTHVRISPVLLQKGLTRLALYDLAI*KIRDFHVF 292
FG+ T + ++P+L +KG T LALY LA +RD +F
Sbjct: 148 FGRVTQNDQITVTPLLFRKGSTNLALYGLA--NVRDERLF 185
Score = 76.6 bits (180), Expect = 7e-13
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLV 435
L++++D+RL R FA VE RP + WF+L +HQN A ++Y+P LP FL+++
Sbjct: 176 LANVRDERLFRTFASGNVEFLRPQDDQAWFSLLAVHQNRASHTETSYLPGNFLPQFLNMI 235
Query: 436 VWGHEHD 456
+WGHEH+
Sbjct: 236 IWGHEHE 242
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = +3
Query: 486 NRERQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLS 665
N E+ +Q GS+VATSL GEA PK+ +L I ++L + L+TVRPF+ K + LS
Sbjct: 250 NPEKGFHVLQAGSSVATSLCEGEAKPKYAFILCITGTTYELEKIRLKTVRPFVMKEVALS 309
Query: 666 EENI 677
I
Sbjct: 310 NSGI 313
>UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5;
Trypanosomatidae|Rep: Endo/exonuclease Mre11, putative -
Leishmania braziliensis
Length = 863
Score = 91.5 bits (217), Expect = 2e-17
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Frame = +2
Query: 5 LLSDQIKNFSR----TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNY 172
LLSD NF N++DPN+N++ P+ +IHGNHDDPV G SSLD+L+ G +NY
Sbjct: 87 LLSDAATNFPTHALPMANFQDPNINVALPVFAIHGNHDDPV--GGTSSLDLLATNGYLNY 144
Query: 173 FGKWTDYTHVRISPVLLQKGLTRLALYDLAI*KIRDFH-VFLLKK 304
FG T + + PVLL+KG T +ALY L + H F LKK
Sbjct: 145 FGHVTSLDDIILEPVLLRKGSTFIALYGLGNVRDERLHRCFRLKK 189
Score = 62.9 bits (146), Expect = 1e-08
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEM--ERPDETLDWFNLFVLHQNHADRGHSNY--IPEGVLPNF 423
L +++D+RL R F KKV++ +P WFN+ VLHQN RG ++ I EG+L F
Sbjct: 173 LGNVRDERLHRCFRLKKVQLVYPKPVPGRKWFNILVLHQNRGVRGLASKGGIMEGMLAGF 232
Query: 424 -LDLVVWGHEHDSHICP 471
+DLV+WG+EH+ + P
Sbjct: 233 GIDLVIWGNEHEQLMVP 249
Score = 56.8 bits (131), Expect = 6e-07
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +3
Query: 510 VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEE 671
VQPGST+ TSL+A E PK G+LE+ +++LTP L++VRP + +T+ L +
Sbjct: 258 VQPGSTIMTSLSAQECNPKEYGILEVRGTSYRLTPYTLRSVRPVVRRTVELRHD 311
>UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to
endo/exonuclease Mre11; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to endo/exonuclease Mre11 - Nasonia
vitripennis
Length = 450
Score = 91.1 bits (216), Expect = 3e-17
Identities = 41/75 (54%), Positives = 54/75 (72%)
Frame = +2
Query: 35 RTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISP 214
+ N++DP LNI PI +IHG+ D P+ G V +LD+L+ TGL+NYFGKW D + I P
Sbjct: 120 KIANFKDPKLNIGMPIFAIHGHRDAPLF-GPVGALDLLAATGLINYFGKWPDKDKISIPP 178
Query: 215 VLLQKGLTRLALYDL 259
VLL+KG+T LALY L
Sbjct: 179 VLLRKGITTLALYGL 193
Score = 65.3 bits (152), Expect = 2e-09
Identities = 24/56 (42%), Positives = 41/56 (73%)
Frame = +3
Query: 513 QPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIG 680
QPGST+ T+L GE +PKH +L+++K +FK+ L ++T+RPF++ + L + N+G
Sbjct: 278 QPGSTIVTTLTRGETVPKHVAILKVYKDSFKMKYLKVKTIRPFVYSRLNLDQHNVG 333
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSN--YIPEGVLPNFLD 429
L+H+ D +L++ K+E+ + + D N+ VLHQN RG + Y+ E ++P+FL+
Sbjct: 193 LNHMNDHKLTKCIKRDKLELLQEETIPDLCNVLVLHQNRQRRGRAENMYVSESLIPDFLN 252
Query: 430 LVVWGHEHDSHICPMKGNKTEKDSF 504
LVVWGHE +C +K +F
Sbjct: 253 LVVWGHE---PVCKIKHESFPNKTF 274
>UniRef50_Q23255 Cluster: Double-strand break repair protein mre-11;
n=2; Caenorhabditis|Rep: Double-strand break repair
protein mre-11 - Caenorhabditis elegans
Length = 728
Score = 89.8 bits (213), Expect = 7e-17
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 4/90 (4%)
Frame = +2
Query: 2 ELLSDQIKNFSRTV----NYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 169
E LSD NF+++V NY D NLN+ PI +IHGNHDD G+G +++LD+L +GLVN
Sbjct: 145 EFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNHDDLSGKG-LTALDLLHESGLVN 203
Query: 170 YFGKWTDYTHVRISPVLLQKGLTRLALYDL 259
FGK ++ +SP+LL+KG TRLALY +
Sbjct: 204 LFGKHSNIQEFIVSPILLRKGETRLALYGI 233
Score = 71.3 bits (167), Expect = 3e-11
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Frame = +1
Query: 268 KDQRLSRLFAEKKVEMERPDETL-DWFNLFVLHQNHADRG-H---SNYIPEGVLPNFLDL 432
+D RL R F + RP+ DWFNLFVLHQN R H N++PE ++P F DL
Sbjct: 237 RDDRLVRAFKNNSISFLRPNAGAEDWFNLFVLHQNRPRRAMHRSTGNFLPESLIPQFFDL 296
Query: 433 VVWGHEHDSHICP--MKGNKTEKDSFFV 510
++WGHEH+ P + ++ D F++
Sbjct: 297 LIWGHEHECKPDPQYVASSEAVGDGFYI 324
Score = 56.4 bits (130), Expect = 8e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +3
Query: 504 FCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGS 683
+ +QPGSTVATSL EAL K+ L++I F P+PLQTVRP + ++L + GS
Sbjct: 323 YILQPGSTVATSLTPEEALQKNAFLIKIKGRKFASKPIPLQTVRPMVCDELLLDKIPPGS 382
Query: 684 EDVNENEK 707
+ + ++
Sbjct: 383 RPILKTDR 390
>UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE11;
n=2; Fungi/Metazoa group|Rep: Double-strand break repair
protein MRE11 - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 731
Score = 87.4 bits (207), Expect = 4e-16
Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 16/111 (14%)
Frame = +2
Query: 2 ELLSD----QIKNFS-RTVNYEDPNLNISYPILSIHGNHDDPVG---QGSVSSLDILSIT 157
ELLSD + FS +NYEDPN NIS P+ SIHGNHDDP G G++ +LD+LS++
Sbjct: 102 ELLSDPDEGKAAGFSFPAINYEDPNFNISIPVFSIHGNHDDPQGPGVNGALCALDVLSVS 161
Query: 158 GLVNYFGKW--------TDYTHVRISPVLLQKGLTRLALYDLAI*KIRDFH 286
GL+NY GK+ T + + PVLL+KG T+L +Y + K + H
Sbjct: 162 GLLNYMGKFDLPTSDADAATTGIAVRPVLLRKGSTKLGMYGVGNVKDQRMH 212
Score = 80.2 bits (189), Expect = 6e-14
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Frame = +3
Query: 495 RQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSE-- 668
+ + QPGS+VATSLA GEA+ KH LLEI F+LTP+PL+TVRPF+ +VL +
Sbjct: 280 KNYYITQPGSSVATSLADGEAIEKHVALLEIKGKEFQLTPIPLRTVRPFVISEVVLEDAA 339
Query: 669 ENIGSEDVNENEKVQEFLKTELMKLLMRLQS 761
E G DVN+ ++ ++LK ++ L+ + Q+
Sbjct: 340 EEEGL-DVNDQMEITKYLKQKVNDLIDQAQA 369
Score = 76.2 bits (179), Expect = 1e-12
Identities = 30/72 (41%), Positives = 44/72 (61%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLV 435
+ ++KDQR+ +V M P + +WFN+ ++HQN G Y+PEG+ + +DLV
Sbjct: 203 VGNVKDQRMHFELRSNRVRMYMPKDKDEWFNILLVHQNRVKHGPQEYVPEGMFDDSVDLV 262
Query: 436 VWGHEHDSHICP 471
VWGHEHD I P
Sbjct: 263 VWGHEHDCRIIP 274
>UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break
processing-related protein, putative; n=3; Fungi/Metazoa
group|Rep: Meiotic DNA double-strand break
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 721
Score = 85.8 bits (203), Expect = 1e-15
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 18/115 (15%)
Frame = +2
Query: 2 ELLSDQIKN----FS-RTVNYEDPNLNISYPILSIHGNHDDPVG---QGSVSSLDILSIT 157
ELLSD + FS VNYEDPN+NI+ P+ SIHGNHDDP G +G++ +LD+LS++
Sbjct: 112 ELLSDPMDGSTPGFSFPAVNYEDPNINIAIPVFSIHGNHDDPQGTGPEGALCALDVLSVS 171
Query: 158 GLVNYFGKW----------TDYTHVRISPVLLQKGLTRLALYDLAI*KIRDFHVF 292
G++NYFGK ++I PVLL+KG T +ALY IRD ++
Sbjct: 172 GVLNYFGKSDLVADESAADNPEKGIQIRPVLLRKGTTHVALYGCG--NIRDQRMY 224
Score = 82.6 bits (195), Expect = 1e-14
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +3
Query: 492 ERQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLS-E 668
++ F QPGS+VATSLA GEA+PKH GLL I F+L +PL+TVRPF +VLS
Sbjct: 295 DKSYFITQPGSSVATSLAPGEAIPKHVGLLSIQGSQFQLEEIPLKTVRPFELDEVVLSYA 354
Query: 669 ENIGSEDVNENEKVQEFLKTELMKLLMR 752
G+ D+N+ + + FL+ ++ L+++
Sbjct: 355 AEQGAVDLNDRDSITSFLREQVEALILQ 382
Score = 67.7 bits (158), Expect = 3e-10
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +1
Query: 262 HLKDQRLSRLFAEKKVEMERPD----ETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLD 429
+++DQR+ + KV+M P DWFN+ ++HQN G NY+PE + + +
Sbjct: 217 NIRDQRMYQELRANKVKMFMPTGGNVPDSDWFNILLVHQNRVRHGPQNYVPENMFDDSMR 276
Query: 430 LVVWGHEHDSHICP 471
LV+WGHEHD I P
Sbjct: 277 LVIWGHEHDCRITP 290
>UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 641
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = +2
Query: 41 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 220
VNYED N NI P+ +I GNHDD G + LDIL+ +GLVNYFGK + + ++P+L
Sbjct: 109 VNYEDENFNIGVPVFAISGNHDDATGDSLLLPLDILAASGLVNYFGKVVNNEDITVAPLL 168
Query: 221 LQKGLTRLALYDLAI*KIRDFH 286
+KG T+LALY + K H
Sbjct: 169 FKKGTTKLALYGIGNVKDERLH 190
Score = 76.2 bits (179), Expect = 1e-12
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERP-DETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
+ ++KD+RL R+F + K R DE WFN +HQNH ++YIPE LP F+D
Sbjct: 181 IGNVKDERLHRVFRDNKATFLRSSDEPDSWFNFLCVHQNHVAHTRTSYIPENFLPKFMDF 240
Query: 433 VVWGHEHDSHICPM 474
V+WGHEH+ PM
Sbjct: 241 VLWGHEHECIPEPM 254
Score = 60.1 bits (139), Expect = 7e-08
Identities = 30/94 (31%), Positives = 55/94 (58%)
Frame = +3
Query: 486 NRERQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLS 665
N E +QPGS+VAT+L+ GE + K+ ++ I + + P+ L+TVRPFI + +VL
Sbjct: 256 NPEMGFDVLQPGSSVATALSPGEMVEKNVFIMNIRDNKYSIEPVKLKTVRPFIMEEVVLQ 315
Query: 666 EENIGSEDVNENEKVQEFLKTELMKLLMRLQS*D 767
+E ++++ V +FL ++ +L+ + D
Sbjct: 316 KEGFVPGPASKDD-VSKFLVNKVQELIQKANEID 348
>UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 883
Score = 85.4 bits (202), Expect = 2e-15
Identities = 51/121 (42%), Positives = 67/121 (55%), Gaps = 24/121 (19%)
Frame = +2
Query: 41 VNYEDPNLNISYPILSIHGNHDDPVG---QGSVSSLDILSITGLVNYFGKWT-------- 187
+NYEDPNLN++ P+ SIHGNHDDP G G++S+LD+LS++GL+NYFGK
Sbjct: 208 INYEDPNLNVAIPVFSIHGNHDDPQGVGETGALSALDLLSVSGLINYFGKIELPSDDAAA 267
Query: 188 -------------DYTHVRISPVLLQKGLTRLALYDLAI*KIRDFHVFLLKKKWKWRDPM 328
+RI PVLLQKG TRLALY + K H L + + P
Sbjct: 268 GAPAARTARGGAFQEKGIRIKPVLLQKGETRLALYGMGNIKDERMHFELRANRVRMYRPQ 327
Query: 329 K 331
+
Sbjct: 328 E 328
Score = 66.5 bits (155), Expect = 8e-10
Identities = 33/87 (37%), Positives = 53/87 (60%)
Frame = +3
Query: 492 ERQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEE 671
E++ QPGS++ATSL+ GE + K ++ + K +F + P+PLQTVRPF+ +VLSEE
Sbjct: 381 EKRYHITQPGSSIATSLSQGETVEKCVAIVHVEKTDFLIEPIPLQTVRPFVMDDMVLSEE 440
Query: 672 NIGSEDVNENEKVQEFLKTELMKLLMR 752
+ +E V + L+ + L+ R
Sbjct: 441 LYDAGLSSERGDVIKLLRKRVDGLIAR 467
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
+ ++KD+R+ +V M RP E D WFN+ +HQN +PE + + + L
Sbjct: 304 MGNIKDERMHFELRANRVRMYRPQEEPDSWFNILCVHQNRVAHNPKACVPETMFDDSVHL 363
Query: 433 VVWGHEHDSHICP 471
VVWGHEH I P
Sbjct: 364 VVWGHEHQQMIQP 376
>UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family
protein; n=1; Tetrahymena thermophila SB210|Rep: Ser/Thr
protein phosphatase family protein - Tetrahymena
thermophila SB210
Length = 884
Score = 84.2 bits (199), Expect = 4e-15
Identities = 41/103 (39%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Frame = +2
Query: 20 IKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQ-GSVSSLDILSITGLVNYFGKWTDYT 196
I N++ VN++D NLNI PI IHGNHD P + G++S +D+L T +N+FGK+++
Sbjct: 104 ISNYN-DVNFQDCNLNIELPIFVIHGNHDYPSDEYGNLSVIDLLHATKYLNHFGKFSNIE 162
Query: 197 HVRISPVLLQKGLTRLALYDLAI*KIRDFHVFLLKKKWKWRDP 325
++++P++ QKG T +ALY + K + FH L + K ++ P
Sbjct: 163 QIKVTPIIFQKGNTTVALYGIGYLKDKYFHKMLEEGKIEFVKP 205
Score = 42.7 bits (96), Expect = 0.011
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDET--LDWFNLFVLHQN-----HADRGHSNYIPEGVL 414
+ +LKD+ ++ E K+E +P++ D N+ V+HQN + + N +
Sbjct: 183 IGYLKDKYFHKMLEEGKIEFVKPEQMGYKDTVNILVIHQNRYKGIRQGQSYRNCVHPEQF 242
Query: 415 PNFLDLVVWGHEHD 456
P ++D ++ GHEH+
Sbjct: 243 PEWIDFIIRGHEHE 256
Score = 33.9 bits (74), Expect = 5.2
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +3
Query: 489 RERQLFCVQPGSTVATSLAAGEALPKHCGLLEIH--KGNFKLTPLPLQTVRPFIFKTIVL 662
+E + +QPGST+ T++ +A P+ L EI + NF+ L +Q+ RP +++ + L
Sbjct: 265 KECPIATIQPGSTILTAIEDVQATPRRAILFEIKGLEANFQDITL-IQSYRPVLYEHVEL 323
Query: 663 S 665
+
Sbjct: 324 T 324
>UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein
Mre11; n=2; Oryza sativa|Rep: Putative DNA repair and
meiosis protein Mre11 - Oryza sativa subsp. japonica
(Rice)
Length = 615
Score = 82.6 bits (195), Expect = 1e-14
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +2
Query: 2 ELLSDQ---IKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNY 172
+++SDQ ++N VN+EDPN NI P+ ++HG HD P G +S+ DILS VNY
Sbjct: 95 QVVSDQAACLQNRFGRVNFEDPNFNIGLPVFTVHGTHDGPAGVDGLSATDILSACNFVNY 154
Query: 173 FGK----WTDYTHVRISPVLLQKGLTRLALYDLAI*KIRD 280
FGK +D + + PV ++KG T +ALY L IRD
Sbjct: 155 FGKVDPGSSDVDQISVCPVFIKKGATSVALYGLG--NIRD 192
Score = 72.5 bits (170), Expect = 1e-11
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +1
Query: 256 LSHLKDQRLSRLF-AEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDL 432
L +++D++LSR+ K++ + D DWFNLFV HQ +N I E +LP+FLDL
Sbjct: 187 LGNIRDEKLSRMLQTHYKIQWMKADSEDDWFNLFVFHQKRRKGSSTNGINEQLLPSFLDL 246
Query: 433 VVWGHEHD 456
V+WGHEH+
Sbjct: 247 VIWGHEHE 254
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +3
Query: 510 VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGSED 689
+ PGS+VATSL+ EA PK+ LLEI +K T +PL++VRPF + + L ++ +G E
Sbjct: 270 IHPGSSVATSLSNAEAKPKNVVLLEIKGMQYKQTNIPLKSVRPFQYAEVQLKDQ-LGVEL 328
Query: 690 VNE 698
NE
Sbjct: 329 NNE 331
>UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n=2;
Cryptosporidium|Rep: DNA repair and meiosis protein
Mre11 - Cryptosporidium parvum Iowa II
Length = 513
Score = 79.4 bits (187), Expect = 1e-13
Identities = 39/94 (41%), Positives = 54/94 (57%)
Frame = +2
Query: 44 NYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLL 223
N+E + N+S P IHGNHDDP +G +S LDIL +NY GK + ++ + PVLL
Sbjct: 35 NWEVGDANVSIPFFGIHGNHDDPGEEGLLSPLDILESARFINYIGKNNNVDNIEVFPVLL 94
Query: 224 QKGLTRLALYDLAI*KIRDFHVFLLKKKWKWRDP 325
+KG TRLA+Y + + H K K K+ P
Sbjct: 95 EKGSTRLAIYGIGNIRDERLHRSFEKNKVKFLIP 128
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/77 (42%), Positives = 49/77 (63%)
Frame = +3
Query: 495 RQLFCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEEN 674
+ F +QPGS++ATSL A E+L KH LLEI FK TP+PL + R FI IVL +++
Sbjct: 191 KNFFVLQPGSSIATSLIASESLQKHVTLLEIKNNTFKTTPIPLLSPRVFIHDNIVL-DKD 249
Query: 675 IGSEDVNENEKVQEFLK 725
+ + + EKV + ++
Sbjct: 250 LAQVEQHLIEKVHQLIE 266
Score = 63.7 bits (148), Expect = 6e-09
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 8/82 (9%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDET---LDWFNLFVLHQNHADRGHS-----NYIPEGV 411
+ +++D+RL R F + KV+ P+ T +WF++ + HQN + IPE
Sbjct: 106 IGNIRDERLHRSFEKNKVKFLIPENTNGDSEWFSILLFHQNRKKGNFGGTLSKDSIPESF 165
Query: 412 LPNFLDLVVWGHEHDSHICPMK 477
LP+FLDL++WGHEH+ + P++
Sbjct: 166 LPDFLDLIIWGHEHECIVNPVE 187
>UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;
n=1; Encephalitozoon cuniculi|Rep: DOUBLE-STRAND BREAK
DNA REPAIR PROTEIN - Encephalitozoon cuniculi
Length = 567
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +2
Query: 41 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 220
+N+ D N+ IS P++SIHGNHDDP G VS +DIL GLVNY GK+ + + P+L
Sbjct: 85 LNFHDQNIGISIPVVSIHGNHDDPSGISMVSPIDILQSAGLVNYIGKYNLIDRIDVYPLL 144
Query: 221 LQKGLTRLALYDL 259
L+K R+A+Y L
Sbjct: 145 LEKEY-RVAIYGL 156
Score = 69.7 bits (163), Expect = 8e-11
Identities = 29/89 (32%), Positives = 50/89 (56%)
Frame = +1
Query: 199 RKNITSTFAKRSYEARPL*LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHAD 378
R ++ ++ Y L H+KD+RL R+F E ++ RP++ W+N+ +LHQN
Sbjct: 137 RIDVYPLLLEKEYRVAIYGLGHIKDRRLYRMFCEGRIVFHRPEDYDSWYNVLILHQNRIP 196
Query: 379 RGHSNYIPEGVLPNFLDLVVWGHEHDSHI 465
R + ++ F DL+V+GHEH+S +
Sbjct: 197 R-EKEHFSSDLVEGFFDLIVYGHEHESMV 224
Score = 39.1 bits (87), Expect = 0.14
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = +3
Query: 510 VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGSED 689
+QPGSTV TSL GE K+ +L I + L + L++VRP + T+ + E + E
Sbjct: 232 LQPGSTVRTSLCEGERHDKYAYILRIGE-ECTLEHVKLRSVRPLLLDTLRIEERDNVEEK 290
Query: 690 VNENE 704
V EN+
Sbjct: 291 V-ENK 294
>UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep:
Mre11 - Entamoeba histolytica
Length = 603
Score = 71.3 bits (167), Expect = 3e-11
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 9/77 (11%)
Frame = +2
Query: 59 NLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGK---------WTDYTHVRIS 211
N I YP+ IHGNHD P G V+ LDIL GLVN+ GK TD T + +S
Sbjct: 104 NQGIKYPMYVIHGNHDIPSGIEHVAGLDILQTAGLVNFIGKAEDISEIDNKTDQTILHLS 163
Query: 212 PVLLQKGLTRLALYDLA 262
P+LLQKG TR+ALY ++
Sbjct: 164 PILLQKGTTRIALYGMS 180
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/70 (32%), Positives = 44/70 (62%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLV 435
+S+ K++ ++RL+A +V+++ PD D F + ++HQ+ R PE +L + +L+
Sbjct: 179 MSYKKNEEMNRLWASSQVQIDEPDG--DVFKILLIHQDRILRNTLTTFPEELLKDRFNLI 236
Query: 436 VWGHEHDSHI 465
V+GHEH S +
Sbjct: 237 VFGHEHCSQV 246
>UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B -
Zea mays (Maize)
Length = 672
Score = 70.5 bits (165), Expect = 5e-11
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Frame = +2
Query: 2 ELLSDQ---IKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNY 172
+++SDQ ++N VNYEDPN I P+ +IHG+ D P G ++S DIL+ +NY
Sbjct: 164 QVISDQAASLQNRFCQVNYEDPNYKIGLPVFTIHGDQDYPTGTDNLSVNDILTAGNFLNY 223
Query: 173 FGK----WTDYTHVRISPVLLQKGLTRLALYDL 259
FGK T V + PV+++KG T +A+Y L
Sbjct: 224 FGKTDLGCTGVGKVTVYPVVIRKGETYIAMYGL 256
Score = 62.9 bits (146), Expect = 1e-08
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKK----VEMERPDET--LDWFNLFVLHQNHADRGHSNYIPEGVLP 417
L ++KD RL R+ E ++ E DET DWFN+ VLHQ + I E +LP
Sbjct: 256 LGNIKDGRLKRMLHEPGAVNWMQPEFQDETPSSDWFNILVLHQKRTRGSPGDAISELLLP 315
Query: 418 NFLDLVVWGHEHDSHICPMK 477
F+D+V+WGHEH+ I P +
Sbjct: 316 RFVDMVIWGHEHECLIDPQE 335
Score = 56.4 bits (130), Expect = 8e-07
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +3
Query: 513 QPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEE 671
QPGS++ATSL EA PKH LEI ++ T +PLQ+VRPF + +VL ++
Sbjct: 345 QPGSSIATSLINTEANPKHALFLEIKGREYRTTKIPLQSVRPFEYAEVVLEDQ 397
>UniRef50_Q4U965 Cluster: Double-strand break repair protein,
putative; n=2; Theileria|Rep: Double-strand break repair
protein, putative - Theileria annulata
Length = 870
Score = 67.3 bits (157), Expect = 5e-10
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +2
Query: 77 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYD 256
P IHGNHD+P Q S+S +DIL + GLV YFG+ D +V I P+ + KG ++ALY
Sbjct: 394 PFFVIHGNHDNPTYQHSLSPIDILDVAGLVTYFGRVFDLENVVIKPIKISKGDVKIALYG 453
Query: 257 L 259
L
Sbjct: 454 L 454
Score = 60.1 bits (139), Expect = 7e-08
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSN---YIPEGVLPNFL 426
L +KD+RL +F + V+ E+ +E ++ + ++HQN R N Y+ ++P +
Sbjct: 454 LGWIKDERLVEMFNKNMVKFEQCEEFDKYYKILMIHQNRYPRRGINDHDYVTTNMIPEWF 513
Query: 427 DLVVWGHEHDSHICPMKGN 483
DLV+WGHEH+S P K +
Sbjct: 514 DLVIWGHEHESIKFPQKSS 532
Score = 44.8 bits (101), Expect = 0.003
Identities = 34/95 (35%), Positives = 46/95 (48%)
Frame = +3
Query: 510 VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGSED 689
+Q GST+ T L E PKH L+ I N P+ L++ R FI + L N +
Sbjct: 539 LQLGSTIQTCLVPAEIPPKHACLIHITTENVNFYPISLKSTRKFI--SDELPNLNTYEKP 596
Query: 690 VNENEKVQEFLKTELMKLLMRLQS*DC*SEAAFTT 794
E++Q +LK E+ KLL SEA FTT
Sbjct: 597 HMNAEELQNYLKKEVEKLLEN-------SEANFTT 624
>UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_64,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1041
Score = 66.1 bits (154), Expect = 1e-09
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Frame = +2
Query: 17 QIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQG--SVSSLDILSITGLVNYFGKWTD 190
++ + + N+ N N+ PI I+GNHDD V + SVS LDIL + +NY GK TD
Sbjct: 465 EVNSLNYQPNFSCSNFNVQLPIFIINGNHDDIVTERNESVSILDILHESKYLNYIGKITD 524
Query: 191 YTHVRISPVLLQKGLTRLALYDLAI*KIRDFHVFLLKKK 307
++V I P++L K ++ALY L K H + + K
Sbjct: 525 QSNVCIKPIVLVKNNQKIALYGLGYMKDYQLHKIINEGK 563
Score = 46.4 bits (105), Expect = 0.001
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 516 PGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQ-TVRPFIFKTIVLSEENIGSEDV 692
PGSTVATS+ E+L K GL + K K + L+ + RP I+K++ LS E I + +
Sbjct: 632 PGSTVATSIIEYESLIKQAGLFTLTKNQMKFESIKLEKSYRPMIYKSVELS-ELIKTAEN 690
Query: 693 NENEKVQE 716
N+N QE
Sbjct: 691 NQNLSNQE 698
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGH----SNYIPEGVLPNF 423
L ++KD +L ++ E K+ ++ DE FN+ ++HQN H N+I +
Sbjct: 547 LGYMKDYQLHKIINEGKLVLDSLDENN--FNILIIHQNKYKGNHFQDERNFIDPLYFKKY 604
Query: 424 -LDLVVWGHEHDS 459
+DL++WGHEH++
Sbjct: 605 KIDLLIWGHEHEA 617
>UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family protein;
n=1; Babesia bovis|Rep: DNA repair protein (Mre11)
family protein - Babesia bovis
Length = 1040
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +2
Query: 77 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYD 256
P IHGNHD+P +S +D+L ++GLV +FG TD T V + P+ + KG LALY
Sbjct: 322 PFFVIHGNHDNPTTMNGLSPIDLLDVSGLVTFFGTVTDMTKVEVHPICISKGDIHLALYG 381
Query: 257 L 259
+
Sbjct: 382 M 382
Score = 54.0 bits (124), Expect = 5e-06
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = +1
Query: 265 LKDQRLSRLFAEKKVEMERPDET-LDWFNLFVLHQN-HADRG--HSNYIPEGVLPNFLDL 432
+K++ L + F E KV P T + ++ + + H+N + RG ++IPE LP++LDL
Sbjct: 385 VKEEFLYKAFEENKVVFVPPVNTGISYYKVLLFHENRYPRRGVKAKDFIPEEFLPDWLDL 444
Query: 433 VVWGHEHDSHICPM 474
V+WGHEH+ PM
Sbjct: 445 VIWGHEHECLKFPM 458
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +3
Query: 510 VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSE 668
+Q GST+ TSLA GE PKHC L+EI K P+ L+T R + I L +
Sbjct: 468 LQMGSTIQTSLATGEMEPKHCCLMEIGDDGVKFYPIYLETARQLHYSEISLCD 520
>UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium vivax|Rep: DNA repair exonuclease, putative -
Plasmodium vivax
Length = 1119
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Frame = +1
Query: 265 LKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQN-HADRGHSN----YIPEGVLPNFLD 429
+KD+RL R F EKKV+ P + N+ VLHQN H H N +I E +P+F+D
Sbjct: 611 IKDERLHRAFEEKKVKFMLPSDHACRINVLVLHQNRHMRCAHGNDFKNFIKESFIPSFVD 670
Query: 430 LVVWGHEHDS 459
LV+WGHEH S
Sbjct: 671 LVIWGHEHFS 680
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/86 (38%), Positives = 47/86 (54%)
Frame = +2
Query: 77 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYD 256
P+ ++HGNHD P +S LDIL + L+NY GK + + I PVLL K T++A+Y
Sbjct: 549 PLFTMHGNHDYPYSCDYISPLDILHVGNLINYIGK-SSLDRIVIKPVLLNKEETKIAIYA 607
Query: 257 LAI*KIRDFHVFLLKKKWKWRDPMKH 334
+ K H +KK K+ P H
Sbjct: 608 IGWIKDERLHRAFEEKKVKFMLPSDH 633
Score = 58.8 bits (136), Expect = 2e-07
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +3
Query: 504 FCVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGS 683
F +Q GS+V TSL E KH GLLEI KG F+ + L+TVRPF K + L+ N+
Sbjct: 693 FSLQLGSSVRTSLCTNEYGDKHIGLLEIRKGRFRFLKIQLETVRPFELKEVRLASYNL-- 750
Query: 684 EDVNENEKVQEFLKTELMKLLMRLQ 758
+ +E ++ FL ++ +L Q
Sbjct: 751 -NFSEESVLKRFLHEQVDAILEGFQ 774
>UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative;
n=1; Trichomonas vaginalis G3|Rep: Ser/Thr protein
phosphatase, putative - Trichomonas vaginalis G3
Length = 562
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/97 (31%), Positives = 52/97 (53%)
Frame = +2
Query: 23 KNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHV 202
+ S N+ +PN+NI P +HGNHD P G GS S + +LS++ +N+F +
Sbjct: 92 EGLSSDPNWLNPNINIKIPFFCMHGNHDAPNGLGSTSPIQLLSVSKYLNFFKPVDIKETI 151
Query: 203 RISPVLLQKGLTRLALYDLAI*KIRDFHVFLLKKKWK 313
+ P++L++G R+ +Y L F ++ KK K
Sbjct: 152 ELQPIVLKRGTIRVVVYGLGYIFEEKFKEVVMGKKLK 188
Score = 35.1 bits (77), Expect = 2.2
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Frame = +1
Query: 256 LSHLKDQRLSRLFAEKKVEMERPDETL--DWFNLFVLHQNHADRGH---------SNYIP 402
L ++ +++ + KK+++ P+E + + ++HQN + H S+ I
Sbjct: 170 LGYIFEEKFKEVVMGKKLKLIAPEEGEFERTYTILMIHQNMSSYDHDIGVMATRLSDAIW 229
Query: 403 EGVLPNFLDLVVWGHEHDSHI 465
P+ +DLV+WGHEH++ I
Sbjct: 230 SETNPHNVDLVIWGHEHENLI 250
Score = 35.1 bits (77), Expect = 2.2
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +3
Query: 501 LFCVQPGSTVATSLAAGEALPKHCGLLEIHKG-NF-KLTPLPLQTVRPFIFKTIVLSEEN 674
++ QPGSTV T A+ + +L I + +F K + L++ R FI+ I + +
Sbjct: 258 IYVTQPGSTVYTQFRKKNAMQRSMAILTISQNPDFDKFEEIKLESPRTFIYDKIEIDNKG 317
Query: 675 IGSEDVNENEKVQEFLKTELMKLL 746
+G E+ N ++E + +L++ +
Sbjct: 318 LGFENDKLN-YIKEQIDDKLLEFM 340
>UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
rad32 - Entamoeba histolytica HM-1:IMSS
Length = 550
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +2
Query: 32 SRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRIS 211
S +N DP +N+ +P+ +IHG +D+P G ++ +IL+ GLVNY + +
Sbjct: 90 SYPLNITDPYINVKHPLFTIHGTNDEPSGYKLIAGSEILASCGLVNYISPKSFEEEKMLK 149
Query: 212 PVLLQKGLTRLALYDLAI*KIRDFHVFLLKKKWKWRDPM-KHWTGSIYLYYIKIMLTEDT 388
PV++ T++ALY L++ D + + + + P W + LY K +++ T
Sbjct: 150 PVIIVNEHTKIALYGLSVLYSSDLDEIVEDETFHIKKPNGNDWICILLLYIGKGTISQTT 209
Query: 389 VTIFQK 406
I +K
Sbjct: 210 KDIIEK 215
>UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium
(Vinckeia)|Rep: Rad32-related - Plasmodium yoelii yoelii
Length = 1037
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Frame = +1
Query: 265 LKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHS-----NYIPEGVLPNFLD 429
+KD+RL F K ++ P++ + N+ +LHQN R + NYI E +P+F+D
Sbjct: 600 IKDERLYNYFENKNIKFIIPEDYKNRINILLLHQNRYMRNTNSNNSKNYIKESFIPSFID 659
Query: 430 LVVWGHEHDS 459
LV+WGHEH+S
Sbjct: 660 LVIWGHEHNS 669
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +2
Query: 71 SYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLAL 250
S P +IHGNHD P + LDIL+I+ L+NY GK + + I P+LL K T +++
Sbjct: 536 SIPFYTIHGNHDYPYSYDYICPLDILNISNLINYIGK-NNMEKLIIKPILLNKKGTHISI 594
Query: 251 YDLAI*KIRDFHVF 292
Y AI I+D ++
Sbjct: 595 Y--AIGWIKDERLY 606
Score = 46.8 bits (106), Expect = 7e-04
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +3
Query: 510 VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGSED 689
+Q GS+V TSL E K+ GLLE+ F+ + L+TVRPF K I L+ ++ +
Sbjct: 684 LQLGSSVRTSLCINEYGDKYIGLLEVKNERFRFLKINLETVRPFELKEIKLANYDL---N 740
Query: 690 VNENEKVQEFLKTELMKLLMRLQ 758
N+ +++FL + +L +++
Sbjct: 741 FNDEYVLKQFLHDQTNLILDKIR 763
>UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair exonuclease,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1118
Score = 59.7 bits (138), Expect = 9e-08
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Frame = +1
Query: 265 LKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADR---GHS--NYIPEGVLPNFLD 429
+KD+RL R F +V+ P + + N+ VLHQN R G++ N+I E +P F+D
Sbjct: 645 MKDERLYRSFENNEVKFILPSDYKNRINILVLHQNRYIRNAYGNNTKNFIKESFIPKFID 704
Query: 430 LVVWGHEHDS 459
LV+WGHEH S
Sbjct: 705 LVIWGHEHFS 714
Score = 56.4 bits (130), Expect = 8e-07
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +2
Query: 77 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALY 253
P +IHGNHD P +S LDIL+I+ L+NY GK + ++ + P+LL K +++++Y
Sbjct: 583 PFYTIHGNHDYPYSYEYISPLDILNISNLINYIGK-NNLNNIVVKPILLNKYKSKISIY 640
Score = 47.2 bits (107), Expect = 5e-04
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 510 VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLS--EENIGS 683
+Q GS+V TS+ E K GLLEI F+ + L+TVRPF K I L+ E N S
Sbjct: 729 IQLGSSVRTSICPNEYGDKFIGLLEIKNQRFRFLKINLETVRPFEMKDIKLADYELNFKS 788
Query: 684 EDVNENEKVQEFLKTELMKLLMRLQS 761
E V ++EFL + +L ++++
Sbjct: 789 ESV-----LKEFLHEQTHAILEKIKN 809
>UniRef50_Q74CF0 Cluster: Nuclease SbcCD, D subunit, putative; n=6;
Bacteria|Rep: Nuclease SbcCD, D subunit, putative -
Geobacter sulfurreducens
Length = 418
Score = 35.1 bits (77), Expect = 2.2
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 23 KNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYF-GKWTDYTH 199
+ F+RT+ P N P +++ GNHD + S+S ++ LS G ++ T+
Sbjct: 65 RTFARTIETLQPLKNAGIPCIAVEGNHDWIHRRDSISWMEALSQMGYIHLLRPSRTETGG 124
Query: 200 VRISPVLLQKGL 235
R SP ++G+
Sbjct: 125 YRFSPFDYEQGM 136
>UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily,
putative; n=1; Salinibacter ruber DSM 13855|Rep:
Nuclease SbcCD, D subunit subfamily, putative -
Salinibacter ruber (strain DSM 13855)
Length = 453
Score = 35.1 bits (77), Expect = 2.2
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 56 PNLNISYPILSIHGNHDDPVGQGSVSSLDILS-ITGLVNYFGK 181
P + P++ I GNHD PV G SSLDI I G V+ + K
Sbjct: 99 PLADADIPVVLIVGNHDHPVTFGRASSLDIFDHIAGAVHCYRK 141
>UniRef50_Q22U51 Cluster: Chitin recognition protein; n=2;
Eukaryota|Rep: Chitin recognition protein - Tetrahymena
thermophila SB210
Length = 4029
Score = 33.9 bits (74), Expect = 5.2
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Frame = +2
Query: 335 WTGSIYLYYIKIMLTEDTVTIFQKECYQTF*IL*CGAMSMIAIFVQ*REIKQRKTAFLCT 514
+T +Y+ Y+K T+D VT +C + C + I + Q IK + F CT
Sbjct: 865 YTSCLYIGYVKSATTDDCVTPLSSDCEKQSNTYACAQSTNICV-QQYGWIKDQSATF-CT 922
Query: 515 --TR*YCGNLFSCRRSTS*ALW---FIRNT*RKFQV-NSSATANSKAFYI*NHSAF 664
T C +C +S S +W +I N+ + S ANS Y S+F
Sbjct: 923 PPTSDQCKGTNNCSQSESACVWLYGYINNSSGVCDIPQPSDCANSSNLYACRDSSF 978
>UniRef50_Q6C3T9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 167
Score = 33.5 bits (73), Expect = 6.8
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2
Query: 271 LLNG*VIEGEPRKTFLQKYW*Y 206
L+N +++ EP KTF+QKYW Y
Sbjct: 127 LVNNEILKDEPEKTFIQKYWMY 148
>UniRef50_Q9A4M3 Cluster: Tryptophan halogenase, putative; n=6;
Alphaproteobacteria|Rep: Tryptophan halogenase, putative
- Caulobacter crescentus (Caulobacter vibrioides)
Length = 509
Score = 33.1 bits (72), Expect = 9.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 308 WKWRDPMKHWTGSIYLYYIKIMLTEDTV 391
W+WR P++H TG+ Y+Y + + ED V
Sbjct: 270 WRWRIPLQHRTGNGYVYSSRDISDEDAV 297
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,908,863
Number of Sequences: 1657284
Number of extensions: 16113207
Number of successful extensions: 37233
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 35943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37185
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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