Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20116
(699 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D5762A Cluster: PREDICTED: similar to CG6040-PA;... 60 7e-08
UniRef50_Q9VE02 Cluster: CG6040-PA; n=4; Sophophora|Rep: CG6040-... 49 1e-04
UniRef50_UPI0000DB7898 Cluster: PREDICTED: similar to CG6040-PA ... 46 9e-04
UniRef50_Q4P5X2 Cluster: Putative uncharacterized protein; n=2; ... 38 0.18
UniRef50_P27514 Cluster: Uncharacterized transporter YNR013C; n=... 35 1.7
UniRef50_A6PTT6 Cluster: Response regulator receiver protein; n=... 34 3.9
UniRef50_Q9C0X8 Cluster: Putative ribosomal RNA-processing prote... 34 3.9
UniRef50_UPI000155F732 Cluster: PREDICTED: similar to Not homeod... 33 5.1
UniRef50_Q0EXM7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A4H9S4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q8BV68 Cluster: 0 day neonate thymus cDNA, RIKEN full-l... 33 8.9
>UniRef50_UPI0000D5762A Cluster: PREDICTED: similar to CG6040-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG6040-PA
- Tribolium castaneum
Length = 1048
Score = 59.7 bits (138), Expect = 7e-08
Identities = 34/82 (41%), Positives = 53/82 (64%)
Frame = +2
Query: 251 STIVVLAQAQVDTLQSYGQSLRSVEALSTNSQLVPTEQVHEAIFMMLQLINGLKCLQARG 430
+T+ VL QV T+QSYG+SL+ +Q + E +A F+MLQL+N LK LQA+G
Sbjct: 833 ATVAVLPWLQVSTIQSYGESLKK------GAQTLE-EAWKDASFIMLQLVNALKILQAQG 885
Query: 431 VEEISETLSSFVALREAQANNN 496
+EE+ +L+SFV +E +++
Sbjct: 886 IEELLLSLNSFVLCKEMDKDSH 907
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +1
Query: 550 RLCILQGLSNEANCKTDEPLNSLCRCAIRALETLLPGEKLSPLLKEV 690
RLC+LQGL + + + + +LC CA +AL L P K +PLL+ +
Sbjct: 909 RLCVLQGLGEDLHLASTDQYGTLCTCASKALSLLQPTAKTTPLLQSL 955
Score = 35.9 bits (79), Expect = 0.96
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +3
Query: 12 DFTVQPKSS-VKAGRRIFCPAVWNSNSPVNVTLMLYKEQMASQIVCQQSVQPQTLSLNAI 188
DF+V+ S + G R F A+WN+ +VTL++ + S ++ T SL I
Sbjct: 758 DFSVKSTSQPLVVGCRTFHQAIWNTQ---HVTLVVNTGAVPSS-----TLTLGTSSLMTI 809
Query: 189 TEFCDLVPRQQFGEDGDD--LVQA 254
TEF DLVP + G + ++ LVQA
Sbjct: 810 TEFSDLVPAKFVGNESEEEKLVQA 833
>UniRef50_Q9VE02 Cluster: CG6040-PA; n=4; Sophophora|Rep: CG6040-PA -
Drosophila melanogaster (Fruit fly)
Length = 1784
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = +1
Query: 550 RLCILQGLSNEANCKTDEPLNSLCRCAIRALETLLPGEKLSPLLKEV 690
RLC+LQG +N+ DEP+ +LC+CA AL +LP K++P+L ++
Sbjct: 1642 RLCVLQGNNND----DDEPMGTLCKCAHSALTDMLPATKITPILADI 1684
Score = 40.7 bits (91), Expect = 0.034
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +2
Query: 332 STNSQLVPT---EQVHEAIFMMLQLINGLKCLQARGVEEISETLSSFVALRE 478
STN+ +P E F+MLQL+NG+K LQA+ +EE +LS+ V ++
Sbjct: 1582 STNANAMPAFDDVMTREVAFIMLQLVNGMKNLQAKAIEETPLSLSNVVLSKD 1633
Score = 37.5 bits (83), Expect = 0.31
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 12 DFTV-QPKSSVKAGRRIFCPAVWNSNSPVNVTLMLYKEQMASQIVCQQSVQPQTLS--LN 182
DFT+ + + G++ F A+W+S SPV + L Q+ + + S +S LN
Sbjct: 1416 DFTILEGTQAFVVGKKAFHAALWSS-SPVTLALSADCNQLGG-VAGELSQLSGGVSDVLN 1473
Query: 183 AITEFCDLVPRQQ 221
+TEFCDLVP Q
Sbjct: 1474 PVTEFCDLVPSYQ 1486
>UniRef50_UPI0000DB7898 Cluster: PREDICTED: similar to CG6040-PA
isoform 2; n=1; Apis mellifera|Rep: PREDICTED: similar to
CG6040-PA isoform 2 - Apis mellifera
Length = 1417
Score = 46.0 bits (104), Expect = 9e-04
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +2
Query: 251 STIVVLAQAQVDTLQSYGQSLRSVEALSTNSQLVPTEQ--VHEAIFMMLQLINGLKCLQA 424
+TI VL + QV T+Q +G + R P E+ + E+ F++LQ + LK LQA
Sbjct: 1204 ATISVLPRLQVSTIQLFGATSRD-----------PHEEGAIRESSFVLLQFVTALKSLQA 1252
Query: 425 RGVEEISETLSSFVALRE 478
RG+EE + +L++ V RE
Sbjct: 1253 RGIEESARSLNNVVLCRE 1270
Score = 34.7 bits (76), Expect = 2.2
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +1
Query: 538 NCYGRLCILQGLSNEANCKTDEPLNSLCRCAIRALETLLPGEKLSPLLKEV 690
+ Y RL +LQG +NE +E SLC+CA+ AL+ L KL P+++E+
Sbjct: 1273 DAYYRLYLLQGCTNEDR---EEERVSLCQCALVALQQLNLASKL-PVIQEL 1319
Score = 33.9 bits (74), Expect = 3.9
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 15 FTVQPKSSVKAGRRIFCPAVWNSNSPVNVTLML 113
F + +S+ GRRIFC A WN +NVTL +
Sbjct: 1132 FGIDANTSITVGRRIFCSATWNE---LNVTLCI 1161
>UniRef50_Q4P5X2 Cluster: Putative uncharacterized protein; n=2;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 747
Score = 38.3 bits (85), Expect = 0.18
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -1
Query: 390 SIMKIASCT-CSVGTSWELVERASTERRLWP*LCKVSTCAWAKTTMVLVLNRLRLRQTVV 214
S + CT C V TSW + A + P L + T A + VLV RL R TVV
Sbjct: 500 SFLNSVMCTICPVMTSW--IYGAGLHAHI-PELVFIFTAAISTVAGVLVSKRLVSRVTVV 556
Query: 213 WVPNHR 196
W+P HR
Sbjct: 557 WIPGHR 562
>UniRef50_P27514 Cluster: Uncharacterized transporter YNR013C; n=3;
Saccharomycetales|Rep: Uncharacterized transporter
YNR013C - Saccharomyces cerevisiae (Baker's yeast)
Length = 894
Score = 35.1 bits (77), Expect = 1.7
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +2
Query: 254 TIVVLAQAQVDTLQSYGQSLRSVEALSTNSQLVPTEQVHEAIFMMLQLINGLKCLQARGV 433
TIVVLA + G+++ S LST +QL+ + HE IF+++ LI GL L
Sbjct: 741 TIVVLAMGGT----TLGKAVSSSGLLSTMAQLIKAQVEHEPIFIIV-LIFGLVILVM--A 793
Query: 434 EEISETLSSFVAL-REAQANNNVPDDD*RHSRL 529
+S T+++ + + ++ +N+P D HSRL
Sbjct: 794 TFVSHTVAAMIIVPLMSEIGSNLPSGD--HSRL 824
>UniRef50_A6PTT6 Cluster: Response regulator receiver protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Response
regulator receiver protein - Victivallis vadensis ATCC
BAA-548
Length = 537
Score = 33.9 bits (74), Expect = 3.9
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 81 SNSPVNVTLMLYKEQMASQIVCQQSVQPQTLSLNA-ITEFCDLVPRQQFGED 233
S SP +V +M ++ A VC + +QP T S++A + EFC+ V E+
Sbjct: 377 SESPDDVFIMALQKNCAIPTVCFRQLQPTTNSISAGVLEFCNFVQHHTGDEE 428
>UniRef50_Q9C0X8 Cluster: Putative ribosomal RNA-processing protein
12; n=2; Eukaryota|Rep: Putative ribosomal
RNA-processing protein 12 - Schizosaccharomyces pombe
(Fission yeast)
Length = 1163
Score = 33.9 bits (74), Expect = 3.9
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Frame = -3
Query: 646 FRVLLLRIGRGSLEVRQFCSSPRCSVLAKYTVSRNSWSSEPRVTSII---VRNVVISLGF 476
F+ + S+E+R ++ CSV+ + NS++ + S I +R++ L +
Sbjct: 324 FKAFFTLLESESMEIRLQTATTICSVIGCLDTTPNSFAVVEEICSFICDALRDIRFRLAY 383
Query: 475 PQRHERGQSLRDFL----DPSRLKALEAVDQLQHHE 380
P+ + SL D L DP + ALE +D L+ E
Sbjct: 384 PECFQIISSLCDKLGPHSDPYLIPALEVIDYLRGSE 419
>UniRef50_UPI000155F732 Cluster: PREDICTED: similar to Not
homeodomain protein; n=2; Eutheria|Rep: PREDICTED:
similar to Not homeodomain protein - Equus caballus
Length = 271
Score = 33.5 bits (73), Expect = 5.1
Identities = 31/105 (29%), Positives = 39/105 (37%)
Frame = +3
Query: 63 CPAVWNSNSPVNVTLMLYKEQMASQIVCQQSVQPQTLSLNAITEFCDLVPRQQFGEDGDD 242
CPA W P +++ LY Q QP L L + FC L Q G G +
Sbjct: 108 CPATW---LPAYLSVGLY----------QPCPQPPVLGLR-VAHFCGL---QGLGVTGSE 150
Query: 243 LVQAPSWFWPKHRWTPYKAMAKVFAPSKLFRPTPNSCQLNRCTKL 377
L P W W P +A+ P K R N QL K+
Sbjct: 151 LAHCPG-LWGPPDWAPVEALQATERPQKRVRTMFNLEQLEELEKV 194
>UniRef50_Q0EXM7 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 572
Score = 33.1 bits (72), Expect = 6.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 324 STERRLWP*LCKVSTCAWAKTTMVLVLNRLRLRQ 223
ST+ W + +S C W T ++L++NR+R +Q
Sbjct: 421 STDHTPWRWIAIISLCGWGLTLLILLVNRVRKKQ 454
>UniRef50_A4H9S4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 2833
Score = 33.1 bits (72), Expect = 6.7
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +1
Query: 361 TGARSYLHDAATDQRPQVPSGARGRGNLGDFVLVRGAEGSPG 486
TG Y DA T P VP+ G GN GD L+ +GSPG
Sbjct: 1687 TGELFYERDAET---PDVPATLAGAGNEGDQPLLTDEQGSPG 1725
>UniRef50_Q8BV68 Cluster: 0 day neonate thymus cDNA, RIKEN
full-length enriched library, clone:A430027J21
product:hypothetical Arginine-rich region/RNA 3'-
terminal phosphate cyclase containing protein, full
insert sequence; n=4; Murinae|Rep: 0 day neonate thymus
cDNA, RIKEN full-length enriched library,
clone:A430027J21 product:hypothetical Arginine-rich
region/RNA 3'- terminal phosphate cyclase containing
protein, full insert sequence - Mus musculus (Mouse)
Length = 186
Score = 32.7 bits (71), Expect = 8.9
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = +1
Query: 250 KHHRGFGPSTGGHLTKLWPKSSLRRSSFDQLPTRAN*TGARSYL 381
+ RG PS GG L +L LRRSS D P R+ G RS L
Sbjct: 119 RRRRGLEPSGGGLLGRLAAPPLLRRSSPDLRPARSPAWGVRSSL 162
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,472,058
Number of Sequences: 1657284
Number of extensions: 15410824
Number of successful extensions: 49583
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 47130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49564
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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