Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20097
(737 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 165 1e-39
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 152 8e-36
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 151 2e-35
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 136 5e-31
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 131 2e-29
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 126 7e-28
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 109 5e-23
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 100 4e-20
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 94 4e-18
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 89 1e-16
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 83 9e-15
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 80 5e-14
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 80 5e-14
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 79 1e-13
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 77 6e-13
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 76 1e-12
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 75 2e-12
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 74 3e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 1e-11
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 72 1e-11
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 70 5e-11
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 70 7e-11
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 69 1e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 69 1e-10
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 69 2e-10
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 68 3e-10
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 66 6e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 1e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 65 1e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 63 6e-09
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 62 1e-08
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 60 7e-08
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 58 3e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 5e-07
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 56 7e-07
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 56 9e-07
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 56 1e-06
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 54 3e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 8e-06
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 52 1e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 3e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 5e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 3e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 4e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.002
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 44 0.003
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.003
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.005
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.005
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.007
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.009
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.028
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.028
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 40 0.048
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 38 0.26
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.34
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.34
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.34
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.45
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.45
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.59
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.59
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 1.0
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 1.0
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.4
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 35 1.8
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.4
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.4
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 3.2
UniRef50_Q7MUP2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 7.3
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.3
UniRef50_A4H7C3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 165 bits (401), Expect = 1e-39
Identities = 83/106 (78%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
Frame = +3
Query: 213 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 392
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 393 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG-KRSESHT 527
NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWG K + HT
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 105 bits (251), Expect = 1e-21
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = +2
Query: 503 G*KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
G KIGKPHTVPCKVTG+CGSV VRLI APRGTGIVSAPVPKKLL MAG+ DCYT
Sbjct: 171 GNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYT 224
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 154 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 267
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 152 bits (369), Expect = 8e-36
Identities = 78/106 (73%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +3
Query: 213 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 392
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 393 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG-KRSESHT 527
NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWG K + HT
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHT 119
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +2
Query: 503 G*KIGKPHTVPCKVTGKCGSVTVRLIHAP 589
G KIGKPHTVPCKVTG+C SV V LI AP
Sbjct: 111 GNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 175 VPVTKLGRLVREGKIDKLESIYLFSLPSKNS 267
+PVTKLG L+ + KI LE IYLFSLP K S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 151 bits (365), Expect = 2e-35
Identities = 69/106 (65%), Positives = 87/106 (82%), Gaps = 1/106 (0%)
Frame = +3
Query: 213 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 392
K + E L IKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 393 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGKR-SESHT 527
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG + HT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 90.6 bits (215), Expect = 3e-17
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = +2
Query: 503 G*KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
G +G PHTVP KV+GKCGSVTVRL+ APRG G+V+APV K+ LQ+AG++DCYTQ
Sbjct: 144 GTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQ 198
Score = 58.4 bits (135), Expect = 2e-07
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +1
Query: 154 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 261
++++KEWVPVTKLGRLV+ GKI +E IYL+SLP K
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIK 63
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 136 bits (329), Expect = 5e-31
Identities = 65/101 (64%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 EHLLVF-FTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 407
EH+ +F IKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 408 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG-KRSESHT 527
LGVK KEVA +I+G++ILAKL+++PVRRGYWG K E HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 76.6 bits (180), Expect = 6e-13
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +2
Query: 503 G*KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
G K+G+PHT+P KV GKCGSV VRLI APRG GIV++ KK+L MAG+ D YT
Sbjct: 161 GSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYT 214
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1
Query: 157 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 261
+D+ WVP TKLGRLV++GKI LE I+LFSLP K
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIK 79
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 131 bits (316), Expect = 2e-29
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 434
+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEV
Sbjct: 63 VKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEV 121
Query: 435 ATAIRGAIILAKLSVLPVRRGYWG 506
A AIR II+AKLSV+P+RRGYWG
Sbjct: 122 AGAIRAGIIIAKLSVIPIRRGYWG 145
Score = 83.4 bits (197), Expect = 5e-15
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = +2
Query: 503 G*KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
G +G+PH++ K TGKCGSVTVRLI APRG+GIV++P KKLLQ+AGV+D YTQ
Sbjct: 145 GTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQ 199
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 160 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 261
++K WVPVTKLGRLV+ GKI +E I+L SLP K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVK 64
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 126 bits (303), Expect = 7e-28
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 483 PVRRGYWGKR 512
P+R+GYWG +
Sbjct: 108 PLRQGYWGNK 117
Score = 97.1 bits (231), Expect = 4e-19
Identities = 48/66 (72%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = +2
Query: 503 G*KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQL-VVQ 679
G KIGKP+TVPCKVTG CGSV V LI APRGTG+VSAPVPKKLL MAG+ DCYT
Sbjct: 115 GNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCT 174
Query: 680 WHLGNF 697
LGNF
Sbjct: 175 ASLGNF 180
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 109 bits (263), Expect = 5e-23
Identities = 53/94 (56%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 434
I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEA 108
Query: 435 ATAIRGAIILAKLSVLPVRRGYW-GKRSESHTPS 533
A+AIRGAI AK ++ PVR G W G + + HT S
Sbjct: 109 ASAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 72.9 bits (171), Expect = 7e-12
Identities = 30/50 (60%), Positives = 40/50 (80%)
Frame = +2
Query: 515 GKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
GKPHTV CK +GKCG+ V++I APRGTGI+S V KK+ ++AG++D YT
Sbjct: 136 GKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYT 185
Score = 37.5 bits (83), Expect = 0.34
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 154 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFS 249
++++ EW+P T +GRLV+ KI LE I+ FS
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFS 46
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 100 bits (239), Expect = 4e-20
Identities = 50/66 (75%), Positives = 52/66 (78%)
Frame = +3
Query: 213 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 392
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 393 NGHIGL 410
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 154 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 267
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 93.9 bits (223), Expect = 4e-18
Identities = 43/54 (79%), Positives = 46/54 (85%)
Frame = +2
Query: 503 G*KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
G +I KPHTVP KVTG+CGSV VRLI APRGTG VSAPVPKKLL MAG+ DCYT
Sbjct: 111 GNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYT 164
Score = 92.7 bits (220), Expect = 9e-18
Identities = 43/59 (72%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Frame = +3
Query: 354 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGKR-SESHT 527
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWG + HT
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHT 119
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 160 DQKEWVPVTKLGRLVREGKI 219
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 88.6 bits (210), Expect = 1e-16
Identities = 45/65 (69%), Positives = 49/65 (75%)
Frame = +3
Query: 213 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 392
K + E L IKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 393 NGHIG 407
NG+ G
Sbjct: 62 NGYAG 66
Score = 48.0 bits (109), Expect = 2e-04
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 6/160 (3%)
Frame = +1
Query: 214 KIDKLESIYLFSLPSKNSRSL---ISSSARP*MMRF*--RSCLYRNKHVPDSAHVS-RHL 375
KI LE IYLFSLP K S + + +S + +++ R + A V+ R
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 376 LPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFEEVTGVKDRKATHRPLQGHRQV 555
A +L R+ P +L C ++ + + G +DR+A HRPLQG R +
Sbjct: 62 NGYAGRVEVLQ---GGGRRHPRGHHPDQAL-HC--HRAQRLLGEQDRQAPHRPLQGDRPL 115
Query: 556 WFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLLHSARG 675
C +W+ + + + EA+ D W LLH ++G
Sbjct: 116 RLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQG 155
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 82.6 bits (195), Expect = 9e-15
Identities = 41/60 (68%), Positives = 44/60 (73%)
Frame = +2
Query: 485 SSKRLLG*KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
S ++ LG KIGK H V CKVTG CGSV V LI A RGTGI SAPVP K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 82.2 bits (194), Expect = 1e-14
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = -1
Query: 533 GRCVAFRSF-TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETC 357
G V F TPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE
Sbjct: 21 GHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEAR 80
Query: 356 ALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDGK 249
L+GT L L HDL + ++Q A+EEI+DLE F+G+
Sbjct: 81 TLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 80.2 bits (189), Expect = 5e-14
Identities = 52/100 (52%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +3
Query: 231 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 410
E L IKE EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVIT 121
Query: 411 GVKCSKEVATAIRGAIILAKLSVLPVRRGYWG-KRSESHT 527
G+ EVA I+ IIL KL ++PV RGY G K S+ HT
Sbjct: 122 GL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHT 158
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = +2
Query: 503 G*KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
G K KPHTV CKVTG GSV++ LI APR T I SAP+PKKLL MAG+ DC+T
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHT 202
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 80.2 bits (189), Expect = 5e-14
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +2
Query: 539 KVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
KVTG+CGSV VRLI APRGTGIVSAPVPKKLL MAG+ DCYT
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYT 166
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/52 (73%), Positives = 39/52 (75%)
Frame = +3
Query: 213 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 368
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 154 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 267
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 434
IKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 92 IKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEV 150
Query: 435 ATAIR 449
AI+
Sbjct: 151 QGAIQ 155
Score = 60.1 bits (139), Expect = 6e-08
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Frame = +1
Query: 163 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKN----SRSLISSSARP*MMRF*RSCLY 330
++EWVP+TKLGRLV+ GKI LE+I+ FS+P K L + P + +
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 331 RNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFE----EV 498
+ A+V ++ + + L W +A++ + L +L C QF+ +
Sbjct: 121 AGQKTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQ-TQFDSSQKRI 174
Query: 499 TGVKDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLLHS 666
G +DR TH P+Q R+ S S YW E ++GW LLHS
Sbjct: 175 LGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLHS 230
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/89 (42%), Positives = 58/89 (65%)
Frame = +3
Query: 231 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 410
E L I+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGL 70
Query: 411 GVKCSKEVATAIRGAIILAKLSVLPVRRG 497
+ KEVA+ IR AI AKL+++PV RG
Sbjct: 71 AICKGKEVASTIRKAIDKAKLNMIPVMRG 99
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +2
Query: 515 GKPHT-VPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
G P T VP K+TG+ GS V L+ AP G G+V + +++L +AGV D +++
Sbjct: 107 GGPGTSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSR 158
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = +2
Query: 518 KPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQLVVQWHLGNF 697
+PH VPC+VTG+CGS+ V LI APRGTG VSAPVP KLL MAG+ D + LGNF
Sbjct: 152 EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDSSSASGCTATLGNF 210
Score = 62.1 bits (144), Expect = 1e-08
Identities = 44/93 (47%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIM---PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 425
IK E I FF S N L P+ KQT Q+TRFKA V +G + GH+ LG+K S
Sbjct: 69 IKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYS 127
Query: 426 KEVATAIRGAIILAKLSVLPVRRGYWGKRSESH 524
EVA IILAKLS++PV GKR E H
Sbjct: 128 MEVA------IILAKLSIIPVETATGGKRLEPH 154
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +1
Query: 163 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNSRSLISSSARP 297
+ +W+P+TKLG LV+E KI LE IY FSL S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = -1
Query: 506 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 327
TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 326 RHDL*NLIIQGRAEEEINDLEFFD 255
R D+ N I+Q ++ +NDLEF D
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFLD 194
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 74.1 bits (174), Expect = 3e-12
Identities = 42/109 (38%), Positives = 59/109 (54%)
Frame = +3
Query: 153 QGRPERVGSCHQTRPSCSRRKNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQ 332
QG + P K + + +L IKEFE+ DF LG L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLFSL-PIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 333 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 479
KQ +AG+R RFK V I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +3
Query: 261 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 440
E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGP 104
Query: 441 AIRGAIILAKLSVLPVRRG 497
AIR AI AKLS++ VR G
Sbjct: 105 AIRKAIAHAKLSLIKVRVG 123
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2
Query: 515 GKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
G PH++P G CGSV V L+ APRG G+V+ V K +L +AGV+D +T+
Sbjct: 132 GSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTK 182
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = +2
Query: 539 KVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYT 165
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = +3
Query: 213 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 368
K + E L IK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +1
Query: 154 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 267
K + KEW+P TKLG LV++ KI LE IYLFSLP K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 70.1 bits (164), Expect = 5e-11
Identities = 31/81 (38%), Positives = 54/81 (66%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 434
+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE
Sbjct: 33 LKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEA 91
Query: 435 ATAIRGAIILAKLSVLPVRRG 497
A AI+ AI AKL+++ ++RG
Sbjct: 92 APAIKKAIDNAKLNIIEIKRG 112
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +2
Query: 515 GKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCY 661
GKPHT+P V GK GSV+V L AP+G G+ V K +L+MAG+ D +
Sbjct: 121 GKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAW 169
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 69.7 bits (163), Expect = 7e-11
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +3
Query: 249 FTIKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 416
+ IKE EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 42 YQIKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGI 100
Query: 417 KCSKEVATAIRGAIILAKLSVLPVRRG 497
KEV AIR AI AKL+++ ++RG
Sbjct: 101 GHGKEVGIAIRKAINYAKLNIIEIKRG 127
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +2
Query: 518 KPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
+PH+VP V GK GSV VRLI PRG G+V V KK+L++AGVQD ++Q
Sbjct: 137 RPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQ 186
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = +3
Query: 246 FFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 425
+ +KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCS
Sbjct: 17 YLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCS 74
Query: 426 KEVATAI 446
K+V TA+
Sbjct: 75 KKVGTAV 81
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 434
I E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++
Sbjct: 41 ITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQL 99
Query: 435 ATAIRGAIILAKLSVLPVRRG 497
AI+ AI AK++++PVRRG
Sbjct: 100 RVAIQKAIRDAKMNIIPVRRG 120
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +2
Query: 515 GKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
G+PH++P KV GK GSV V L+ AP+GTG+V V K LL AG++D ++
Sbjct: 129 GEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWS 178
Score = 33.9 bits (74), Expect = 4.2
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 166 KEWVPVTKLGRLVREGKIDKLESIYLFSLP 255
+EW P T +G LV+EGKI ++ ++ +LP
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLP 40
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/79 (36%), Positives = 52/79 (65%)
Frame = +3
Query: 267 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 446
++++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK S + I
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGI 157
Query: 447 RGAIILAKLSVLPVRRGYW 503
+ A+ AKL++ +RRGYW
Sbjct: 158 KAALRKAKLAITKIRRGYW 176
Score = 56.4 bits (130), Expect = 7e-07
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = +2
Query: 515 GKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
GKP+T+ K +GK GSV V + AP+GTGIV++ +L+++G++DC+T+
Sbjct: 181 GKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTK 231
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 434
+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V
Sbjct: 86 LKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQV 144
Query: 435 ATAIRGAIILAKLSVLPVRRG 497
AI+ AI +AKL+++ V RG
Sbjct: 145 GGAIQKAIDVAKLNIIEVDRG 165
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +2
Query: 515 GKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
G +++ K GK GSVTV + AP+G G+ +A + +L++AGV+D +T
Sbjct: 174 GGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWT 223
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = +2
Query: 503 G*KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQD 655
G KI KPHTV C+VT SV V I APRGT I+SAPVPKKLL+MA + D
Sbjct: 71 GNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDD 121
Score = 62.5 bits (145), Expect = 1e-08
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 276 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 455
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 456 IILAKLSVLPVRRGYWG-KRSESHTPS 533
IIL + S+ G+ G K ++ HT S
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVS 81
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +3
Query: 330 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 473
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = +2
Query: 509 KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCY 661
++ + V KVT GSV V LI APRGTGIVSAPV K L AG+ +CY
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCY 102
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 434
+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V
Sbjct: 35 LKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQV 93
Query: 435 ATAIRGAIILAKLSVLPVRRG 497
AI+ AI +AKL+++ V RG
Sbjct: 94 GGAIQKAIDIAKLNIIDVSRG 114
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +2
Query: 515 GKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
G+PHTV + GK GSV V L APRG G+ +K+L++AG++D +T+
Sbjct: 123 GRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTR 173
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 63.3 bits (147), Expect = 6e-09
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 434
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++
Sbjct: 74 IQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQM 132
Query: 435 ATAIRGAIILAKLSVLPVRRG 497
AI A A L+V P++ G
Sbjct: 133 RIAIEKATNAAYLNVNPIKMG 153
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +2
Query: 524 HTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
H+VP KV GK GSVT+ +I APRG G+V+ K+LL++AG++D +T
Sbjct: 165 HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWT 211
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 434
IKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 15 IKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKEL 74
Query: 435 ATAIRGAIIL 464
A+ IIL
Sbjct: 75 LIAVCRTIIL 84
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 59.7 bits (138), Expect = 7e-08
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 434
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQM 113
Query: 435 ATAIRGAIILAKLSVLPVRRG 497
AI A A L+V P++ G
Sbjct: 114 RIAIEKANNQALLNVGPIKLG 134
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/47 (48%), Positives = 35/47 (74%)
Frame = +2
Query: 524 HTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
H+VP KV GK GSV + ++ APRG G+V+ ++LL++AG++D YT
Sbjct: 146 HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYT 192
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/46 (60%), Positives = 33/46 (71%)
Frame = +2
Query: 527 TVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
TV CKVTG+C SV + LI P I+SAPVPKKLL +A + DCYT
Sbjct: 162 TVSCKVTGQCVSVLICLI--PPTRNIISAPVPKKLLLLANIDDCYT 205
Score = 54.4 bits (125), Expect = 3e-06
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +3
Query: 258 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 437
K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+ A
Sbjct: 88 KKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTA 143
Query: 438 TAI 446
TAI
Sbjct: 144 TAI 146
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 288 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 467
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 468 KLSVL--PVRRGY 500
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 56.4 bits (130), Expect = 7e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +2
Query: 584 APRGTGIVSAPVPKKLLQMAGVQDCYT 664
APRGTGIVSAPVPKKLL MAG+ DCYT
Sbjct: 2 APRGTGIVSAPVPKKLLMMAGIDDCYT 28
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +1
Query: 154 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 261
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/58 (51%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 479 FTSSKRLLG*KIGKPHTVPCKVTG-KCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGV 649
F++ G KIG PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 115 FSTQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
Score = 49.2 bits (112), Expect = 1e-04
Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +3
Query: 267 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 446
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 447 RGAIILAKLSVLPVRRGYWG-KRSESHT 527
+ AI L + + GY G K HT
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNKIGNPHT 131
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +3
Query: 255 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 410
IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 62 IKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 35.9 bits (79), Expect = 1.0
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 178 PVTKLGRLVREGKIDKLESIYLFSLPSK 261
PVTKLGRLV++GK+ ++ I+ F + K
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 477 VLPV 488
++ V
Sbjct: 72 LISV 75
Score = 37.1 bits (82), Expect = 0.45
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +2
Query: 527 TVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
T+P ++ G+ GS V + A GTG++S + +L++AGV D T+
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTK 127
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +2
Query: 515 GKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
G PH++P +V GK GSV V L AP+G GIV+ KK+ ++AG++D + +
Sbjct: 136 GAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVR 186
Score = 51.2 bits (117), Expect = 3e-05
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 13/96 (13%)
Frame = +3
Query: 249 FTIKEFEIIDFFLGPSLNDEVLKIMPV-------------QKQTRAGQRTRFKAFVAIGD 389
+ I+E EI+D L P+L E +K + QK+T G +TR++ +GD
Sbjct: 33 YVIREPEIVDVLL-PNLEVEFMKWRIIRGKFRSKKPYRMAQKKTAEGNKTRYEVIAIVGD 91
Query: 390 NNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 497
+GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 92 KDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 37.1 bits (82), Expect = 0.45
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 166 KEWVPVTKLGRLVREGKIDKLESI 237
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +3
Query: 294 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 473
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 474 SVLPVRR 494
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +2
Query: 485 SSKRLLG*KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYT 664
++ L+ K K ++ V G+ G+ V L+ AP GTGI++ + ++++AG D YT
Sbjct: 105 ANNNLIKVKQTKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYT 164
Query: 665 Q 667
+
Sbjct: 165 K 165
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +3
Query: 276 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 455
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 456 IILAKLSVLPV 488
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +3
Query: 291 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 470
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 471 LSVLPV 488
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 477 VLPVR 491
+ V+
Sbjct: 138 MYKVK 142
Score = 37.9 bits (84), Expect = 0.26
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +2
Query: 509 KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
K+ K T+ +V GK G+ V + AP+GTG+++ K +L++ G +D Y++
Sbjct: 142 KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSK 194
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 483 PV 488
+
Sbjct: 71 KI 72
Score = 42.7 bits (96), Expect = 0.009
Identities = 16/51 (31%), Positives = 33/51 (64%)
Frame = +2
Query: 518 KPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQL 670
K +T+P ++ GK G+ T+ + A GTG+++ +++L++ GV D T++
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKI 125
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 483 PV 488
V
Sbjct: 77 EV 78
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 527 TVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
T+P +V G+ + V L A GTGI++ + ++++AG+Q+ T+
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTK 130
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 282 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 461
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 462 LAKLSVLPV 488
AK +++ V
Sbjct: 98 EAKKNLIRV 106
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 527 TVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
TVP +V G G+ V + A GTG+++ + ++++AG+ D Y +
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAK 158
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 483 --PVRRG 497
PV G
Sbjct: 79 TVPVENG 85
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 527 TVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGV 649
T+P ++ G+ + V L A GTG+++ VP+ + ++AG+
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGI 126
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 483 PV 488
V
Sbjct: 209 QV 210
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 455
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 483 PV 488
V
Sbjct: 246 TV 247
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 288 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 467
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 468 KLSVL--PVRRG 497
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +3
Query: 288 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 467
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 468 KLSVLPVRR 494
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = -3
Query: 657 QSCTPAI*RSFLGTGADTIPVPRGA*ISRTVTEPHLPVTLQGTVCG 520
QS P+ FLGT A+ +PVP GA + T TEP P+TL G +CG
Sbjct: 26 QSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCG 70
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 476
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 477 VLPVRRG 497
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 300 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 479
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 480 LPV 488
+ +
Sbjct: 91 VKI 93
Score = 40.3 bits (90), Expect = 0.048
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 518 KPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
K HT+P +V GK S V L + GTGI++ + +++ AG+QD T+
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTK 145
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 483 PV 488
V
Sbjct: 128 RV 129
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +2
Query: 491 KRLLG*KIGKPHTVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQD 655
K L+ + K +++P ++G G+ V L A GTG+++ + +L++AG+++
Sbjct: 124 KALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKN 178
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 477 VLPV 488
V+ V
Sbjct: 88 VIRV 91
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +2
Query: 527 TVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQLV 673
TVP V G G+ + ++ A RGTG+V+ K + ++AG D T+++
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKII 145
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 483 PV 488
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.028
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 483 PV 488
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 470
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 40.3 bits (90), Expect = 0.048
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 172 WVPVTKLGRLVREGKIDKLESIYLFSLPSK 261
W PVTKLGRLV++GK+ ++ I+ F + K
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 37.9 bits (84), Expect = 0.26
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +2
Query: 539 KVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQDCYTQ 667
+V G+ G+ V L AP+GTGI++ + ++++AG D YT+
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTK 181
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.34
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 327 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 494
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.34
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 449
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.34
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 477 VLPVRR 494
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 458 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 360
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 449
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.59
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +3
Query: 297 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 476
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 477 VLPV 488
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 36.7 bits (81), Expect = 0.59
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 303 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 482
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 483 PV 488
V
Sbjct: 151 RV 152
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 300 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 449
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
Score = 33.9 bits (74), Expect = 4.2
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 527 TVPCKVTGKCGSVTVRLIHAPRGTGIVSAPVPKKLLQMAGVQD 655
T+P +V K G V L A GTG+++ + +L++AGV+D
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVED 126
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 1.0
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 309 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 488
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 327 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 494
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 294 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 473
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 474 SVLPVRR 494
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -1
Query: 254 GKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 159
GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 22 GKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 285 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 464
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 465 AKLSVL 482
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 282 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 446
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 3.2
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +3
Query: 294 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 473
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 474 SVLPVRR 494
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q7MUP2 Cluster: Putative uncharacterized protein; n=1;
Porphyromonas gingivalis|Rep: Putative uncharacterized
protein - Porphyromonas gingivalis (Bacteroides
gingivalis)
Length = 214
Score = 33.1 bits (72), Expect = 7.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 627 SFFRWLVYRTATLSSWFNGTWEILLKPHML 716
SF RW+V+ T ++ W N W+ L +P +L
Sbjct: 156 SFPRWIVFATPLITIWLNFLWKTLPQPFLL 185
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 33.1 bits (72), Expect = 7.3
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Frame = -2
Query: 181 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPLL 20
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPVR 205
Query: 19 NDGPRA 2
+ R+
Sbjct: 206 HPRSRS 211
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 309 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 455
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_A4H7C3 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1313
Score = 33.1 bits (72), Expect = 7.3
Identities = 27/94 (28%), Positives = 42/94 (44%)
Frame = -2
Query: 652 LYTSHLKKLLRNWRRHNSSTTRGMNQPDCYRTTLAGDLARDGVWLSDLLPQ*PLRTGKTD 473
+Y +HL R+ SS +R P C ++ AG + +S+ +P P +
Sbjct: 378 IYHAHLAASTRSSLAQPSSYSRPARSPACSPSSAAGAASAAPTPISNSVPAAPQSIRNSR 437
Query: 472 NLARIIAPRMAVATSLLHFTPKPI*PLLSPMATN 371
N + + V SL F P PLLSP+AT+
Sbjct: 438 NASNLNLAINHVRKSL--FIGPPPSPLLSPVATS 469
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,262,644
Number of Sequences: 1657284
Number of extensions: 16324470
Number of successful extensions: 47810
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 44996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47650
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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