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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20022
         (392 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel...   129   2e-29
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-...   127   7e-29
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary...   124   6e-28
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ...   109   2e-23
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary...   106   2e-22
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=...   101   5e-21
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ...    93   2e-18
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota...    91   5e-18
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy...    81   1e-14
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ...    79   2e-14
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ...    74   9e-13
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ...    73   3e-12
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel...    72   5e-12
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka...    71   1e-11
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w...    67   1e-10
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;...    62   5e-09
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea...    60   1e-08
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz...    56   2e-07
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ...    56   3e-07
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ...    54   1e-06
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl...    48   5e-05
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ...    34   1.1  
UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15...    33   1.5  
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph...    33   2.0  
UniRef50_UPI0000D57120 Cluster: PREDICTED: similar to CG13648-PA...    33   2.6  
UniRef50_UPI0000661128 Cluster: Homolog of Brachydanio rerio "Pr...    33   2.6  
UniRef50_UPI0000DA1B06 Cluster: PREDICTED: hypothetical protein ...    32   3.4  
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul...    32   3.4  
UniRef50_UPI0000E1FDBE Cluster: PREDICTED: hypothetical protein;...    32   4.5  
UniRef50_A1DDG4 Cluster: Putative uncharacterized protein; n=1; ...    31   6.0  
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm...    31   6.0  
UniRef50_A3UJE5 Cluster: TPR domain protein; n=1; Oceanicaulis a...    31   7.9  

>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
           Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
           sapiens (Human)
          Length = 110

 Score =  129 bits (312), Expect = 2e-29
 Identities = 64/110 (58%), Positives = 77/110 (70%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           RL++KA+F GYKRGLRNQ E+TALLK+EG   R++  FY GK C YVY+AK  T  PG  
Sbjct: 4   RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG-- 61

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
            GK N+     G+          VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62  -GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110


>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 157

 Score =  127 bits (307), Expect = 7e-29
 Identities = 61/110 (55%), Positives = 75/110 (68%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           RL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P  P
Sbjct: 49  RLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHP 108

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
             +K +     G+          VRA+F  NLP  AMGHRIR+MLYPSRI
Sbjct: 109 E-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157


>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
           Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
           japonicum (Blood fluke)
          Length = 128

 Score =  124 bits (299), Expect = 6e-28
 Identities = 62/110 (56%), Positives = 74/110 (67%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           RLY KA FTGY+RGLRNQHE+TALL+++G  +R    FY GK CVYVYRA+K+   P   
Sbjct: 21  RLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFYLGKRCVYVYRAEKKKVFP--R 78

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
           R K  +     G+   P      VRA+FK NLPA AMG RIRVMLYPSR+
Sbjct: 79  RQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPASAMGKRIRVMLYPSRV 128


>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
           Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
           Diaphorina citri (Asian citrus psyllid)
          Length = 172

 Score =  109 bits (262), Expect = 2e-23
 Identities = 54/110 (49%), Positives = 70/110 (63%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           RLYA+A+FTG+KRG RNQH NT+LL +E    + DA FY GK CV++Y+AK +   P   
Sbjct: 65  RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 124

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
           R  K++     G+   P      VRAKF  NLPA  MG ++R+MLYPS I
Sbjct: 125 R--KSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 172


>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
           Eukaryota|Rep: 60S ribosomal protein L35a -
           Caenorhabditis elegans
          Length = 124

 Score =  106 bits (254), Expect = 2e-22
 Identities = 55/110 (50%), Positives = 71/110 (64%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           RLY KA+FTG+KRGLR Q E+T+LLK+EG  ++ DA FYAGK  VY+Y+A  +T   G  
Sbjct: 17  RLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYKAHNKTLKTGHT 76

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
              + +A    G+   P      VRAKF  N+P  A+G RIRV+LYPS I
Sbjct: 77  VATRTRA--IWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSNI 124


>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
           Ciona intestinalis|Rep: Putative 60S ribosomal protein
           L35a - Ciona intestinalis (Transparent sea squirt)
          Length = 122

 Score =  101 bits (242), Expect = 5e-21
 Identities = 50/97 (51%), Positives = 65/97 (67%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           RL+ KAVFTGY RGLRNQHE+TALL++EG  ++ D  FY GK C YVY+AK++T     P
Sbjct: 4   RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKT---P 60

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAM 298
           RG+ N+     G+          VRA FK+NLPA+A+
Sbjct: 61  RGEPNKTRVIWGKVTRSHGNSGVVRATFKTNLPAKAI 97


>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
           protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
           similar to ribosomal protein L35a - Mus musculus
          Length = 86

 Score = 92.7 bits (220), Expect = 2e-18
 Identities = 48/88 (54%), Positives = 57/88 (64%)
 Frame = +2

Query: 74  ALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKNQAACYLGQGDPPTWQLW 253
           ALLK+EG   R++  FY GK C YVY+AK  T  PGG   K N+     G+         
Sbjct: 2   ALLKIEGVYARDETEFYLGKRCAYVYKAKNNTMTPGG---KLNKTRMIWGKVTRAHGNSS 58

Query: 254 RVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
            VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 59  MVRAKFRSNLPAKAIGHRIRVMLYPSRI 86


>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
           Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
          Length = 112

 Score = 91.5 bits (217), Expect = 5e-18
 Identities = 44/110 (40%), Positives = 64/110 (58%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           RLY +    GYKR   NQ+E T+L+++EG   + D  +YAGK   Y+Y+AK ++      
Sbjct: 11  RLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS------ 64

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
              + +  C  G+   P      VRAKFKSNLP ++MG ++RV +YPS I
Sbjct: 65  --SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI 112


>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
           cytosolic 80S ribosome and 60S large subunit; n=1;
           Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
           L35a, component of cytosolic 80S ribosome and 60S large
           subunit - Ostreococcus lucimarinus CCE9901
          Length = 109

 Score = 80.6 bits (190), Expect = 1e-14
 Identities = 44/111 (39%), Positives = 60/111 (54%)
 Frame = +2

Query: 5   TRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 184
           TRLY + +  GYKR   NQ+ +T+L+K+EG  D     FY GK   YVY+AK +     G
Sbjct: 7   TRLYVRGLILGYKRARTNQYNHTSLIKLEGVSDAPSTAFYGGKKLCYVYKAKTKKQ---G 63

Query: 185 PRGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
              +          G         VRAKFKS+LP+ ++G ++R MLYPS I
Sbjct: 64  TAYRTIWGKVMRAHGTSGV-----VRAKFKSHLPSNSIGGKVRCMLYPSNI 109



 Score = 31.9 bits (69), Expect = 4.5
 Identities = 13/19 (68%), Positives = 13/19 (68%)
 Frame = +3

Query: 201 TKLRAIWGKVTRPHGNSGV 257
           T  R IWGKV R HG SGV
Sbjct: 64  TAYRTIWGKVMRAHGTSGV 82


>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
           Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
           Leishmania major
          Length = 144

 Score = 79.4 bits (187), Expect = 2e-14
 Identities = 45/113 (39%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAK--KRTPIPG 181
           RLY K    GY RGL  Q + TAL++VE    R DA +Y GK   YVY  K  KR     
Sbjct: 32  RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWYVGKRVCYVYHGKKVKRCVRWS 91

Query: 182 GPRGKKNQAACYLGQGDPPTWQLWRVRAKFK-SNLPAQAMGHRIRVMLYPSRI 337
               +++      G+   P      +R KF  +++PA A+G RIRV LYPS+I
Sbjct: 92  KAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVPASAIGRRIRVYLYPSQI 144


>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
           n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
           putative - Plasmodium vivax
          Length = 146

 Score = 74.1 bits (174), Expect = 9e-13
 Identities = 41/110 (37%), Positives = 55/110 (50%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           RLY K V  GYKR  RNQ  N  L+ +     +  A FY GK   YVYR  K        
Sbjct: 45  RLYEKGVILGYKRSQRNQDPNFTLISIRNVHTKKHAQFYVGKKIAYVYRTNKHHD----- 99

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
            G K    C  G+          +RA+F++N+P +A G R+R+++YPS I
Sbjct: 100 -GVK--IKCIWGKVCRTHGNSGVIRARFRTNIPPKAFGDRVRILMYPSNI 146


>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
           n=2; Filobasidiella neoformans|Rep: 60s ribosomal
           protein l33-b, putative - Cryptococcus neoformans
           (Filobasidiella neoformans)
          Length = 178

 Score = 72.5 bits (170), Expect = 3e-12
 Identities = 41/111 (36%), Positives = 59/111 (53%)
 Frame = +2

Query: 5   TRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 184
           +RLY K    G+KRG RN   N +LL++EG  ++  A  Y GK   YVY+AK+      G
Sbjct: 76  SRLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHYLGKRVAYVYKAKREI---NG 132

Query: 185 PRGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
            R +          G+        V++KF++NLPA+  G   R+ML+PS I
Sbjct: 133 SRVRVIWGRISRSHGNSGA-----VKSKFRTNLPAKTFGASCRIMLFPSNI 178


>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
           discoideum AX4|Rep: Ribosomal protein L35a -
           Dictyostelium discoideum AX4
          Length = 105

 Score = 71.7 bits (168), Expect = 5e-12
 Identities = 40/110 (36%), Positives = 56/110 (50%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           ++Y+K V  GY+R    Q+ N +L+K+EG   R D+ FY GK    V +  K    P G 
Sbjct: 3   KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNPTGH 62

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
           +    +     G           V+A+F  NLP +AMG  +RVMLYPS I
Sbjct: 63  KISWGKICKTHGSSGV-------VQARFARNLPPKAMGAPVRVMLYPSNI 105


>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
           Eukaryota|Rep: 60S ribosomal protein L33-B -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 107

 Score = 70.5 bits (165), Expect = 1e-11
 Identities = 42/110 (38%), Positives = 55/110 (50%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           RLY K     Y+R  R  + N +L+K+EG     +A FY GK   YVYRA K        
Sbjct: 6   RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEV------ 59

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
           RG K +     G+          VRA F++NLPA+  G  +R+ LYPS I
Sbjct: 60  RGSKIRV--MWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107


>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
           whole genome shotgun sequence; n=9; Eukaryota|Rep:
           Chromosome undetermined scaffold_177, whole genome
           shotgun sequence - Paramecium tetraurelia
          Length = 129

 Score = 66.9 bits (156), Expect = 1e-10
 Identities = 40/109 (36%), Positives = 56/109 (51%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           RL+ KAVFTG++R    Q+EN ALLK+E   D   + FY GK   Y+Y+A     +    
Sbjct: 28  RLWVKAVFTGFRRSKVQQNENQALLKIEHVNDVASSRFYWGKRVAYIYKAHS---LKNNT 84

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSR 334
           + +          G         V A+F  NLP +A+G  +RV LYP+R
Sbjct: 85  KFRAIWGRISKSHGSNGV-----VTARFGRNLPPRAIGSTLRVFLYPNR 128



 Score = 33.5 bits (73), Expect = 1.5
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = +3

Query: 201 TKLRAIWGKVTRPHGNSGV 257
           TK RAIWG++++ HG++GV
Sbjct: 84  TKFRAIWGRISKSHGSNGV 102


>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
           Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
           putative - Trichomonas vaginalis G3
          Length = 102

 Score = 61.7 bits (143), Expect = 5e-09
 Identities = 40/110 (36%), Positives = 57/110 (51%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           +L+  A F  ++R  R    N ALL+++G   + +A FYAGK    V++  K+  I  G 
Sbjct: 6   KLFVPATFVSFRRSKRIIKPNQALLEIQGVVSKEEAQFYAGKKVASVWKFDKQEFINWG- 64

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
                     + Q   P      VRAKF+ NLP Q +G ++RVMLYPS I
Sbjct: 65  ---------VITQ---PHGNSGVVRAKFEKNLPPQMLGKQVRVMLYPSTI 102


>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
           mays (Maize)
          Length = 139

 Score = 60.1 bits (139), Expect = 1e-08
 Identities = 31/85 (36%), Positives = 47/85 (55%)
 Frame = +2

Query: 44  RGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKNQAACYLG 223
           R   NQ+E T+L+++EG   + D  +YAGK   Y+Y+AK ++         + +  C  G
Sbjct: 43  RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS--------SETRYRCIWG 94

Query: 224 QGDPPTWQLWRVRAKFKSNLPAQAM 298
           +   P      VRAKFKSNLP ++M
Sbjct: 95  KVTRPHGNSGVVRAKFKSNLPPESM 119


>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
           Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 119

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 34/99 (34%), Positives = 51/99 (51%)
 Frame = +2

Query: 41  KRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKNQAACYL 220
           ++G+     + +L+K++G      A FY GK   +VYRAK+        RG   +     
Sbjct: 29  RQGIWEADTSYSLIKIDGVDSTEAANFYLGKKVAFVYRAKREV------RGSNIRVIW-- 80

Query: 221 GQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
           G+   P      VRA+F+ NLP ++ G  +RVMLYPS I
Sbjct: 81  GKVTRPHGNSGVVRAQFRHNLPPKSFGATVRVMLYPSNI 119



 Score = 39.9 bits (89), Expect = 0.017
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +3

Query: 201 TKLRAIWGKVTRPHGNSGV 257
           + +R IWGKVTRPHGNSGV
Sbjct: 74  SNIRVIWGKVTRPHGNSGV 92


>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
           Pezizomycotina|Rep: Putative uncharacterized protein -
           Ajellomyces capsulatus NAm1
          Length = 102

 Score = 55.6 bits (128), Expect = 3e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +2

Query: 2   GTRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKK 163
           G RLY K     Y+RG R  + NT+L+K+EG +D   A FY GK   +VYRAK+
Sbjct: 6   GHRLYVKGRHLSYQRGKRATNPNTSLIKLEGVEDIKAANFYLGKKVAFVYRAKR 59



 Score = 32.3 bits (70), Expect = 3.4
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3

Query: 201 TKLRAIWGKVTRPHGNSG 254
           +K+R IWGKVTR HG  G
Sbjct: 64  SKIRVIWGKVTRTHGQLG 81


>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
           protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
           similar to ribosomal protein L35a - Macaca mulatta
          Length = 80

 Score = 53.6 bits (123), Expect = 1e-06
 Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHC---VYVYRAKKRTPIP 178
           RL++KAVF GYKRG RNQ E+TALLK+E     ++  FY  K       + RAK ++ +P
Sbjct: 4   RLWSKAVFAGYKRGPRNQREHTALLKIEAVYAGDETEFYLDKKAHGNSGMVRAKFQSNLP 63

Query: 179 GGPRGKKNQAACY 217
               G   Q   Y
Sbjct: 64  AKAIGHGIQVMLY 76



 Score = 47.2 bits (107), Expect = 1e-04
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = +2

Query: 257 VRAKFKSNLPAQAMGHRIRVMLYPSRI 337
           VRAKF+SNLPA+A+GH I+VMLYPS I
Sbjct: 54  VRAKFQSNLPAKAIGHGIQVMLYPSSI 80


>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
           ATCC 50803
          Length = 123

 Score = 48.4 bits (110), Expect = 5e-05
 Identities = 33/103 (32%), Positives = 48/103 (46%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           + +  A+F GY+R    Q EN AL+KV G   R +     G+  + +  +K   PI    
Sbjct: 7   KTFLPAIFVGYQRSRAKQRENVALVKVSGIYTRAETDKVLGR-LIAIIHSKSGKPI---- 61

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRV 316
                      G+   P      VRA+F +NLP Q MGH++RV
Sbjct: 62  ----------FGKICRPHGNSGMVRARFYTNLPGQLMGHKVRV 94


>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
           protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
           similar to ribosomal protein L35a - Rattus norvegicus
          Length = 106

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 83  KVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGK 196
           + EG   R++   +  K C YVY+AK     PGG   K
Sbjct: 49  RAEGVYARDETELHLAKRCAYVYKAKISAVTPGGKTNK 86


>UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15;
           Staphylococcus|Rep: Cassette chromosome recombinase C -
           Staphylococcus aureus
          Length = 559

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 26  VFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKH 136
           V+ GY R   N H+N A+ +  G  D+ND +   GKH
Sbjct: 233 VYKGYVRF--NNHQNWAVQRRSGKSDKNDVILVKGKH 267


>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
           Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
           - Encephalitozoon cuniculi
          Length = 113

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
 Frame = +2

Query: 5   TRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKH--CVYVYRAKKRTPIP 178
           +R    A F  +KRG R  H    LLK+     +++A  Y G    C       +R P+ 
Sbjct: 12  SRTTIPATFVSFKRGQRRLHPRHVLLKIRNVTSKDEASSYVGNGVVCYKKNNEGERYPVH 71

Query: 179 GG-PRGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLY 325
           G   R   N  A               VRA+F  NL  + +G  + V LY
Sbjct: 72  GVITRIHGNSGA---------------VRARFTRNLDPKLLGTHVFVKLY 106


>UniRef50_UPI0000D57120 Cluster: PREDICTED: similar to CG13648-PA;
            n=1; Tribolium castaneum|Rep: PREDICTED: similar to
            CG13648-PA - Tribolium castaneum
          Length = 2645

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 168  HQFPEVPVAKKTKLRAIWGKVTRPHGNSGVSEPSSSLTSLPRLWDTEYE 314
            H+FP++PV ++ +  +  GKVT    +   +E     T  PR+   E++
Sbjct: 1155 HRFPQMPVEEEQETESAIGKVTTEQPSEKETETPQQATEAPRIPSGEFD 1203


>UniRef50_UPI0000661128 Cluster: Homolog of Brachydanio rerio
           "Prognosticated neural developmental protein.; n=1;
           Takifugu rubripes|Rep: Homolog of Brachydanio rerio
           "Prognosticated neural developmental protein. - Takifugu
           rubripes
          Length = 405

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +3

Query: 21  RPYSQDISVVYATSTRTPLSSR-LKEQKTVMMQSFMLASIASMCTELRRGHQFPEVPVAK 197
           RP+S  + VV        LSSR L+EQ + +M +   A +A +C  +  G+   ++ +++
Sbjct: 317 RPWSVSVLVVVVVLDMAALSSRALQEQLSAIMGALTKAVVAEICELVDEGYALLQMEISR 376

Query: 198 KTK 206
             K
Sbjct: 377 SRK 379


>UniRef50_UPI0000DA1B06 Cluster: PREDICTED: hypothetical protein
           isoform 1; n=1; Rattus norvegicus|Rep: PREDICTED:
           hypothetical protein isoform 1 - Rattus norvegicus
          Length = 174

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 23/89 (25%), Positives = 35/89 (39%)
 Frame = -2

Query: 277 RLELGSDTPELPCGRVTLPQIARSLVFFATGTSGNWCPLLSSVHIDAMLASIKDCIITVF 98
           RLEL   T    CG +    + R+   F     G  CPL  +V ++    ++     +  
Sbjct: 8   RLELVLFTAAFLCGALAAAALTRTQASF-----GGSCPLYGAVALNGTYLALSHPSASSL 62

Query: 97  CSFNLEESGVLVLVA*TTLISCEYGLCVQ 11
           C F    SG+L L     L    Y  C++
Sbjct: 63  CYFVAGASGILALYCLLLLFFWVYSSCIE 91


>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
           Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
           Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
          Length = 106

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 34/110 (30%), Positives = 45/110 (40%)
 Frame = +2

Query: 8   RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
           R+Y   +  GY+ G   Q+E   L++V+G  DR  A    G   +Y              
Sbjct: 7   RVYT-GIILGYRLGSNTQYEKQVLIRVDGVNDRASASRLIGWKVLY-------------R 52

Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
            GK N+   Y G+          V A FK NLP QA G    V +YP  I
Sbjct: 53  DGKGNE---YRGKIVHVHGSKGVVIAVFKPNLPGQARGG--NVYIYPKGI 97


>UniRef50_UPI0000E1FDBE Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 73

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +2

Query: 185 PRGKKNQAACYLGQGDPPTWQLW 253
           P+ ++++A  +LG G PP+W+LW
Sbjct: 10  PQVREHEACHHLGSGLPPSWELW 32


>UniRef50_A1DDG4 Cluster: Putative uncharacterized protein; n=1;
           Neosartorya fischeri NRRL 181|Rep: Putative
           uncharacterized protein - Neosartorya fischeri (strain
           ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
           fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
          Length = 516

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 232 VTLPQIARSLVFFATGTSG-NWCPLLSSVHIDAMLASIKDCIITVFCSFNLEESGVLVLV 56
           + +PQ AR LVF   G +G  W P  +S        S + C+I   C+  L  + + +L+
Sbjct: 280 IGVPQCARPLVFHVEGLAGEQWAPYPNS---QPATTSHESCLINSLCNLTLIVNDICLLL 336

Query: 55  A 53
           +
Sbjct: 337 S 337


>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
           Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
           Pyrococcus abyssi
          Length = 87

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 25/100 (25%), Positives = 39/100 (39%)
 Frame = +2

Query: 20  KAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKK 199
           K V   Y+R   NQH N  ++K      R +A    G+  ++             P GK 
Sbjct: 4   KGVVLSYRRSKENQHTNVMIIKPLNVNSREEASKLIGRLVIW-----------KSPSGKL 52

Query: 200 NQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVM 319
            +       G         VRA+F+  LP QA+G  + ++
Sbjct: 53  LKGKIVRVHGTKGA-----VRARFEKGLPGQALGDYVEII 87


>UniRef50_A3UJE5 Cluster: TPR domain protein; n=1; Oceanicaulis
           alexandrii HTCC2633|Rep: TPR domain protein -
           Oceanicaulis alexandrii HTCC2633
          Length = 566

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 218 LGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLY 325
           L +GD P W   R+  + +  +PAQ   HR  V+ Y
Sbjct: 151 LARGDAPAWTQTRIHLESEDMIPAQQQMHRALVLDY 186


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,628,958
Number of Sequences: 1657284
Number of extensions: 8528660
Number of successful extensions: 22628
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 22087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22597
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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