SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00012
         (730 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar...   131   1e-29
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary...   118   2e-25
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta...   113   6e-24
UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3; Eukaryo...    95   2e-18
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar...    78   3e-13
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu...    76   8e-13
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;...    73   7e-12
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;...    70   5e-11
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R...    70   5e-11
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo...    70   5e-11
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga...    70   7e-11
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno...    51   3e-05
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae...    50   4e-05
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba...    50   4e-05
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus...    47   5e-04
UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein ...    43   0.009
UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725...    42   0.015
UniRef50_Q1NH79 Cluster: Butyryl-CoA dehydrogenase; n=3; Proteob...    35   1.8  
UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=...    34   4.1  
UniRef50_A5DWM5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_Q6ZWG3 Cluster: CDNA FLJ41135 fis, clone BRACE2028970; ...    33   9.5  

>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
           Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
           melanogaster (Fruit fly)
          Length = 204

 Score =  131 bits (317), Expect = 1e-29
 Identities = 59/86 (68%), Positives = 65/86 (75%)
 Frame = +2

Query: 251 GSTYGKPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDP 430
           G TYGKPKSHGVNQLKP R LQSIA+E            +SYW+AQD+SYKYFEVIL+D 
Sbjct: 78  GCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDT 137

Query: 431 SHKAIRRDPKINWIVNAVHKHREMRG 508
            H AIRRDPKINWI   VHKHRE+RG
Sbjct: 138 HHSAIRRDPKINWICKHVHKHRELRG 163



 Score =  116 bits (278), Expect = 8e-25
 Identities = 50/57 (87%), Positives = 56/57 (98%)
 Frame = +3

Query: 21  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQ 57



 Score = 67.3 bits (157), Expect = 4e-10
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = +1

Query: 508 LTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 630
           LTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N   + RKR
Sbjct: 164 LTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204


>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
           Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
           (Human)
          Length = 204

 Score =  118 bits (283), Expect = 2e-25
 Identities = 52/86 (60%), Positives = 62/86 (72%)
 Frame = +2

Query: 251 GSTYGKPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDP 430
           G+TYGKP  HGVNQLK  R+LQS+A+E            +SYWV +DS+YK+FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137

Query: 431 SHKAIRRDPKINWIVNAVHKHREMRG 508
            HKAIRR+P   WI   VHKHREMRG
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRG 163



 Score =  110 bits (265), Expect = 3e-23
 Identities = 49/57 (85%), Positives = 54/57 (94%)
 Frame = +3

Query: 21  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1   MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQ 57



 Score = 69.7 bits (163), Expect = 7e-11
 Identities = 32/41 (78%), Positives = 34/41 (82%)
 Frame = +1

Query: 508 LTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 630
           LTSAGR SRGLGKGH++  T GGSRRAAW RRNTLQL R R
Sbjct: 164 LTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204


>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
           Eumetazoa|Rep: 60S ribosomal protein L15 -
           Caenorhabditis elegans
          Length = 204

 Score =  113 bits (271), Expect = 6e-24
 Identities = 47/88 (53%), Positives = 62/88 (70%)
 Frame = +2

Query: 245 C*GSTYGKPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILV 424
           C G TYGKPK+HGVN+LK  ++ Q++A+             +SYWVA+DS+YK++EV+L+
Sbjct: 76  CKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLI 135

Query: 425 DPSHKAIRRDPKINWIVNAVHKHREMRG 508
           DP HKAIRR+P   WI   VHKHRE RG
Sbjct: 136 DPFHKAIRRNPDTQWITKPVHKHREQRG 163



 Score =  100 bits (239), Expect = 4e-20
 Identities = 41/57 (71%), Positives = 51/57 (89%)
 Frame = +3

Query: 21  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           MGAY+Y+QE++RKK SD +R+LLR+R W YRQL+ +HR PRPTRP+KARRLGYRAKQ
Sbjct: 1   MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQ 57



 Score = 56.8 bits (131), Expect = 5e-07
 Identities = 26/41 (63%), Positives = 30/41 (73%)
 Frame = +1

Query: 508 LTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 630
           LTSAGR SRGLGKG R+S T+GGS+   W R+NT    RKR
Sbjct: 164 LTSAGRKSRGLGKGWRFSATRGGSQAKNWKRKNTKVFHRKR 204


>UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3;
           Eukaryota|Rep: 60S ribosomal protein L15 - Brugia
           pahangi (Filarial nematode worm)
          Length = 71

 Score = 94.7 bits (225), Expect = 2e-18
 Identities = 40/57 (70%), Positives = 49/57 (85%)
 Frame = +3

Query: 21  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           MGAYRY+QEL+RKK S+ MR+LLR+R WQYRQLT +HR  RPTRP+KARRLGY + +
Sbjct: 1   MGAYRYMQELWRKKKSETMRYLLRIRCWQYRQLTAIHRVSRPTRPEKARRLGYLSNE 57


>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
           Euryarchaeota|Rep: 50S ribosomal protein L15e -
           Halobacterium salinarium (Halobacterium halobium)
          Length = 196

 Score = 77.8 bits (183), Expect = 3e-13
 Identities = 35/81 (43%), Positives = 48/81 (59%)
 Frame = +2

Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
           + K  GVN++   +NLQ IA+E            +SYWV +D S K+FE IL+DP H AI
Sbjct: 83  RTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAI 142

Query: 446 RRDPKINWIVNAVHKHREMRG 508
           + D  +NWI +  HK+R  RG
Sbjct: 143 QNDDDLNWICDDSHKNRVFRG 163



 Score = 38.3 bits (85), Expect = 0.19
 Identities = 21/54 (38%), Positives = 29/54 (53%)
 Frame = +3

Query: 30  YRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           Y +I+E +       +  L   R   +R+   + R  RPTR DKAR LGY+AKQ
Sbjct: 6   YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQ 59


>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
           organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
           horikoshii
          Length = 194

 Score = 76.2 bits (179), Expect = 8e-13
 Identities = 36/81 (44%), Positives = 45/81 (55%)
 Frame = +2

Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
           KP   G  +  P ++LQ IA+E            +SYWV +D  YK+FEVI+VDP H  I
Sbjct: 81  KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVI 140

Query: 446 RRDPKINWIVNAVHKHREMRG 508
           + DPKI WI    HK R  RG
Sbjct: 141 KSDPKIAWIALKHHKGRVFRG 161



 Score = 50.0 bits (114), Expect = 6e-05
 Identities = 24/57 (42%), Positives = 37/57 (64%)
 Frame = +3

Query: 21  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           MG Y+YI+E ++      +  LL+ R+ ++R+   + R  RPTR D+AR LGY+AKQ
Sbjct: 1   MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQ 57


>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
           Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
           L15E - Ignicoccus hospitalis KIN4/I
          Length = 245

 Score = 72.9 bits (171), Expect = 7e-12
 Identities = 33/81 (40%), Positives = 46/81 (56%)
 Frame = +2

Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
           +PK  GV    P ++ + IA+E            +SYWVA+D  Y+++EVILVDP H AI
Sbjct: 103 RPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHPAI 162

Query: 446 RRDPKINWIVNAVHKHREMRG 508
             DP++ WI    H+ R  RG
Sbjct: 163 CSDPELKWICEKQHRGRVFRG 183



 Score = 44.4 bits (100), Expect = 0.003
 Identities = 20/61 (32%), Positives = 37/61 (60%)
 Frame = +3

Query: 9   QAAKMGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAK 188
           Q+   G Y +++E +++        L++ R+ ++R+   + R  +PTR D+AR LGY+AK
Sbjct: 19  QSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAK 78

Query: 189 Q 191
           Q
Sbjct: 79  Q 79


>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
           n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 172

 Score = 70.1 bits (164), Expect = 5e-11
 Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
 Frame = -1

Query: 505 THLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXTFI 326
           THL++L+    DP+ +R++++  +  ++EDNL+  +  I  NPV  Q          +F+
Sbjct: 20  THLSVLVDWFGDPLGVRLSSDSFMEWINEDNLKKFICEIFTNPVGIQDSQSSTMVPSSFL 79

Query: 325 SNGLKVARGLQLVDTMALGLAISGPLATGRLRPPR--RTRILNTT*PCLAR*PSLRALSG 152
           SN LK +  +QLV+T+   LAIS  L              + +TT   L   PS   LSG
Sbjct: 80  SNRLKASGKVQLVNTVVNRLAISCTLRKWAFSTTTADTNPVKDTTLLSLVSQPS---LSG 136

Query: 151 LVGLGARCIRVN*RYCHTLTRNKKRITSLSFFLYNS 44
            +G GA     N +YC   T  +K I S  FFL++S
Sbjct: 137 WMGWGALYSAENWQYCQQWTLRRKHIMSDCFFLHSS 172


>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
           Ribosomal protein L15 - Oryza sativa subsp. indica
           (Rice)
          Length = 438

 Score = 70.1 bits (164), Expect = 5e-11
 Identities = 35/57 (61%), Positives = 41/57 (71%)
 Frame = +3

Query: 21  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           MGAYR + EL+R+K SDVM F+ RVR W +R   R     RPTRPDKARRLG +AKQ
Sbjct: 1   MGAYRCVSELWRRKQSDVMTFVQRVRCWDHR---RQPAIGRPTRPDKARRLGDKAKQ 54



 Score = 49.2 bits (112), Expect(2) = 8e-07
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +2

Query: 407 FEVILVDPSHKAIRRDPKINWIVNAVHKHREMRG 508
           FE+ILVD +H AIR D +INW+   VHKH E+ G
Sbjct: 363 FEIILVDVAHSAIRDDLRINWLCKPVHKHGELHG 396



 Score = 44.0 bits (99), Expect = 0.004
 Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 508 LTSAGRSSRGL-GKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 630
           LTSAG   RGL GKGH + + +  S RA W R  T+ LRR R
Sbjct: 397 LTSAGNKYRGLRGKGHTHHKARPSSPRATWKRNQTVSLRRYR 438



 Score = 26.6 bits (56), Expect(2) = 8e-07
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 251 GSTYGKPKSHGVNQLKPTRN 310
           G  Y KPK  G+ QLK  RN
Sbjct: 337 GIVYSKPKHQGITQLKFQRN 356


>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
           Thermoprotei|Rep: 50S ribosomal protein L15e -
           Sulfolobus acidocaldarius
          Length = 217

 Score = 70.1 bits (164), Expect = 5e-11
 Identities = 32/81 (39%), Positives = 48/81 (59%)
 Frame = +2

Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
           +PK  GV    P++  + IA+E             SY+VA+D  YKY+EVI+VD SH  I
Sbjct: 81  RPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVI 140

Query: 446 RRDPKINWIVNAVHKHREMRG 508
           R DP++ W+ ++V++ R  RG
Sbjct: 141 RSDPELKWLQDSVNRKRVFRG 161



 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 23/57 (40%), Positives = 37/57 (64%)
 Frame = +3

Query: 21  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           +  Y YI++ ++ K  D  R +LR R+ ++R+   + R  RPTR ++AR LGY+AKQ
Sbjct: 3   LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQ 57


>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
           maquilingensis IC-167|Rep: Ribosomal protein L15e -
           Caldivirga maquilingensis IC-167
          Length = 185

 Score = 69.7 bits (163), Expect = 7e-11
 Identities = 30/79 (37%), Positives = 46/79 (58%)
 Frame = +2

Query: 254 STYGKPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPS 433
           +T  +PK  GV  +  + NLQ +A++             SYWV +D+ YK+FEV+++DPS
Sbjct: 77  NTGRRPKRMGVYGVALSTNLQVVAEQRAARRFSNLEVLGSYWVGEDAMYKWFEVVMIDPS 136

Query: 434 HKAIRRDPKINWIVNAVHK 490
           H AIR DP   W+V   ++
Sbjct: 137 HPAIRNDPDYAWVVGKEYR 155



 Score = 53.6 bits (123), Expect = 5e-06
 Identities = 22/57 (38%), Positives = 39/57 (68%)
 Frame = +3

Query: 21  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           MG  RY+ ++++K   D +R +++ R+ ++R+   + R  +PTR DKAR+ GY+AKQ
Sbjct: 1   MGTLRYVADIWKKPYEDPLRQVIKARLIKWRREPAILRVDKPTRIDKARKYGYKAKQ 57


>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr6 scaffold_28, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 313

 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 26/67 (38%), Positives = 39/67 (58%)
 Frame = +2

Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
           +P + GV QLK  RN   + +E            +   + +DS+YKY+E+ILVD +H AI
Sbjct: 2   EPTNQGVTQLKFHRNKSLVTEERDGRKL------AGLKINEDSTYKYYEIILVDVAHSAI 55

Query: 446 RRDPKIN 466
           + DP+IN
Sbjct: 56  QNDPRIN 62


>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
           Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
           symbiosum
          Length = 152

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 24/72 (33%), Positives = 39/72 (54%)
 Frame = +2

Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
           +PK  GV ++K   +++ +A               SY+V +D +Y +FEVIL DPSH  +
Sbjct: 78  RPKHLGVTRIKADVSMKQVAVRRVLERYPNMSLLGSYFVYKDGAYYWFEVILADPSHPRV 137

Query: 446 RRDPKINWIVNA 481
            +DP++   V A
Sbjct: 138 AKDPELRDRVGA 149



 Score = 37.1 bits (82), Expect = 0.44
 Identities = 18/35 (51%), Positives = 24/35 (68%)
 Frame = +3

Query: 87  LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           +R RV  +R+   + R  RPTR D+AR LGY+AKQ
Sbjct: 20  IRDRVIIWRKQNAVTRIERPTRIDRARSLGYKAKQ 54


>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
           Pyrobaculum|Rep: 50S ribosomal protein L15e -
           Pyrobaculum aerophilum
          Length = 191

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 23/64 (35%), Positives = 35/64 (54%)
 Frame = +2

Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
           +PK  GV  +   ++ + +A+E            +SYWVA D  Y+YFEVIL+D +   I
Sbjct: 83  RPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILIDCNLPTI 142

Query: 446 RRDP 457
           + DP
Sbjct: 143 KNDP 146



 Score = 42.7 bits (96), Expect = 0.009
 Identities = 22/55 (40%), Positives = 34/55 (61%)
 Frame = +3

Query: 27  AYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           AY Y+   YRK   +V   L+R  + ++R+   + R  RP R ++AR+LGY+AKQ
Sbjct: 5   AYSYMAMWYRKIGREVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQ 59


>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
           Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
           L15e - Candidatus Nitrosopumilus maritimus SCM1
          Length = 190

 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 19/66 (28%), Positives = 36/66 (54%)
 Frame = +2

Query: 266 KPKSHGVNQLKPTRNLQSIADEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 445
           +PK  GV ++K   N++++A+              SY++ +D  + +FEVIL DP H  +
Sbjct: 117 RPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVILADPDHPRV 176

Query: 446 RRDPKI 463
            +D ++
Sbjct: 177 AQDKEL 182



 Score = 35.9 bits (79), Expect = 1.0
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = +3

Query: 87  LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 191
           LR RV  +R+   + R  +P+R  +ARRLGY+AKQ
Sbjct: 59  LRERVVGWRKQNAVTRIDKPSRIQRARRLGYKAKQ 93


>UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein
           isoform 2; n=1; Pan troglodytes|Rep: PREDICTED:
           hypothetical protein isoform 2 - Pan troglodytes
          Length = 110

 Score = 42.7 bits (96), Expect = 0.009
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
 Frame = -1

Query: 541 RDLGSCD-QPKSTTHLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQ 365
           R L +C  QP   THL +L+    DP+ +RI+++  +  ++EDNL   +  I  NPVR Q
Sbjct: 31  RALSACRCQP---THLPVLVEWFDDPLGVRISSDSFMEWINEDNLRKFLCGIFTNPVRIQ 87

Query: 364 HXXXXXXXXXTFISNGLKVARGL 296
                     + + NGLK +  L
Sbjct: 88  DAQSPMVASSSLLCNGLKASSKL 110


>UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725w;
           n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
           protein dl4725w - Arabidopsis thaliana (Mouse-ear cress)
          Length = 520

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 19/44 (43%), Positives = 32/44 (72%)
 Frame = -1

Query: 508 TTHLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNP 377
           T+  ++L++ + DPVD  I ++G+V RV++DNL +LV R+L  P
Sbjct: 465 TSEFSVLVHRVADPVDPWIISDGIVCRVYKDNLVVLVGRVLRKP 508


>UniRef50_Q1NH79 Cluster: Butyryl-CoA dehydrogenase; n=3;
           Proteobacteria|Rep: Butyryl-CoA dehydrogenase -
           Sphingomonas sp. SKA58
          Length = 387

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 27/101 (26%), Positives = 45/101 (44%)
 Frame = +2

Query: 404 YFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRG*LRLVAAPEVSARDIDTLKQREAHA 583
           +FE  LV   H     D     ++  ++  R M G   L     V    +D +KQR+A  
Sbjct: 217 HFENALVADEHVLGEPDKAWYMLLPTLNNERIMVGAFCLGVIDGVLEDALDYMKQRKAFG 276

Query: 584 GQLGSDATLFNYVANDKHLSKTVSDFPFAYFCMQMESQWDN 706
           G +G   +L +YVA+   + KT       ++C   +S+ +N
Sbjct: 277 GIIGRFQSLQHYVADIATMQKTTE--LMLHYCAHKQSRGEN 315


>UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=1;
           Azoarcus sp. BH72|Rep: General secretion pathway protein
           F - Azoarcus sp. (strain BH72)
          Length = 401

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -1

Query: 325 SNGLKVARGL-QLVDTMALGLAISGPLATGRLRPPRRTRIL 206
           +  L V  GL Q+ D +A G  +SG LA+ R+ PPR TR+L
Sbjct: 294 AGNLVVRTGLEQVADDIAAGADLSGALASTRVFPPRVTRML 334


>UniRef50_A5DWM5 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 465

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
 Frame = -3

Query: 353 HRNDGQHVHQQWIEGCAWASTG*HHGSWACHKWTL---SNWTLAATTSHTDSEYNITLFS 183
           H++    V    ++  A +ST    G    H+ TL   SN+T AAT ++T++  N     
Sbjct: 33  HQHHNDRVLPSLVQATADSSTS-PLGKLQPHQSTLTPLSNYTFAATNNNTNNRNNTITAK 91

Query: 182 TVA*SSGFVRPCGPGSAVHTSQLTVLPYPHTQQKTHNI 69
            VA ++    P    S VH+  L+    PH    T  +
Sbjct: 92  GVAPANAANAPIAVSSKVHSPALSEHQNPHFTTNTPRV 129


>UniRef50_Q6ZWG3 Cluster: CDNA FLJ41135 fis, clone BRACE2028970;
           n=2; Homo sapiens|Rep: CDNA FLJ41135 fis, clone
           BRACE2028970 - Homo sapiens (Human)
          Length = 142

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +2

Query: 104 AVPSVDSYAPRSQAHKAGQSPKTRLPC*TRLCCIQNPCATWWPQA--SSC*GSTYGKPKS 277
           A P V+S+ PR+Q H A   P+T  P  T +   + PC   W  +  SSC G   G  + 
Sbjct: 42  AHPQVESWVPRAQTHPA--PPQTWAPFFT-MHSSEQPCRQTWRASVLSSCEGLCLGPWRH 98

Query: 278 HGVNQLKPTRNLQSI 322
            G    +   N++ +
Sbjct: 99  CGAGTGRAPANIKGV 113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,436,826
Number of Sequences: 1657284
Number of extensions: 15135766
Number of successful extensions: 38725
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 37362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38706
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -