Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30176.Seq
(834 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB79EC Cluster: PREDICTED: similar to mitochondr... 119 8e-26
UniRef50_Q9VMX0 Cluster: 39S ribosomal protein L28, mitochondria... 113 7e-24
UniRef50_UPI00015B5D75 Cluster: PREDICTED: similar to GA17686-PA... 103 7e-21
UniRef50_UPI0000E46F94 Cluster: PREDICTED: similar to MGC84279 p... 66 1e-09
UniRef50_Q13084 Cluster: 39S ribosomal protein L28, mitochondria... 65 2e-09
UniRef50_O76606 Cluster: Putative uncharacterized protein T25D3.... 60 5e-08
UniRef50_Q5D9B2 Cluster: SJCHGC01033 protein; n=2; Schistosoma j... 57 5e-07
UniRef50_Q4TDV8 Cluster: Chromosome undetermined SCAF6006, whole... 41 0.033
UniRef50_Q8N8G8 Cluster: CDNA FLJ39525 fis, clone PUAEN2002758; ... 38 0.23
UniRef50_Q8YPQ1 Cluster: Serine/threonine kinase; n=3; Nostocace... 36 0.95
UniRef50_Q018G8 Cluster: C-4 sterol methyl oxidase; n=2; Ostreoc... 36 1.3
UniRef50_Q5CSU7 Cluster: Putative uncharacterized protein; n=2; ... 35 2.2
UniRef50_A7HQK0 Cluster: Glycosyl transferase family 2; n=1; Par... 34 5.1
>UniRef50_UPI0000DB79EC Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L28 CG3782-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L28 CG3782-PA - Apis mellifera
Length = 274
Score = 119 bits (287), Expect = 8e-26
Identities = 51/87 (58%), Positives = 69/87 (79%)
Frame = +1
Query: 256 RDELTGETYPIQNIPIPLKFPAEINEGIWGGEAVVKGFQKRDDRRRRVPHYWVPVLKRTV 435
R+E T E YP+QNIP+PL +P E ++GIWGGEAV++GF K++ RR PH+W P LK++V
Sbjct: 57 RNEETEEVYPVQNIPLPLLYPKEFHQGIWGGEAVIQGFTKKNKYARRHPHFWFPTLKKSV 116
Query: 436 VRSEVLNTHLSVTVTDRTISLINDPMG 516
V SEVL+T+LSV +T+RTI LIN+ G
Sbjct: 117 VYSEVLDTYLSVVITNRTIDLINEHYG 143
Score = 79.4 bits (187), Expect = 1e-13
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3
Query: 510 YGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPRHAYDPKKQMGIYEEYQTYLSSYT 689
YGFDHYLLKTPACDL S LALK+K+ IL L + + D K+ IY +Y+ YL+ YT
Sbjct: 142 YGFDHYLLKTPACDLKSELALKIKRQILLSLADK-TLYPNDVVKREEIYTKYKEYLTPYT 200
Query: 690 PEXIEWYG 713
E IEWYG
Sbjct: 201 REEIEWYG 208
Score = 60.1 bits (139), Expect = 7e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +2
Query: 131 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKW 253
K R+ GI +ELP YKKFWREWK+ P AVH++ QEGK+
Sbjct: 15 KPTRWSKGIGAELPQEYKKFWREWKIQIPTAVHYIKQEGKY 55
>UniRef50_Q9VMX0 Cluster: 39S ribosomal protein L28, mitochondrial
precursor; n=4; Diptera|Rep: 39S ribosomal protein L28,
mitochondrial precursor - Drosophila melanogaster (Fruit
fly)
Length = 302
Score = 113 bits (271), Expect = 7e-24
Identities = 51/103 (49%), Positives = 73/103 (70%)
Frame = +1
Query: 208 TEASSCTFRSSRREVERDELTGETYPIQNIPIPLKFPAEINEGIWGGEAVVKGFQKRDDR 387
T ++ + ++ ERDE+T P+QNIP+PL E + GIWGGEAV+KGFQKR+
Sbjct: 43 TTPAAVHYIPKEQQWERDEVTHAIKPVQNIPLPLIDTPESHRGIWGGEAVIKGFQKREQT 102
Query: 388 RRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTDRTISLINDPMG 516
+RRVPH+WVP L+R+VV S VL+ ++SV VT+RT+ I++ G
Sbjct: 103 KRRVPHFWVPNLRRSVVHSHVLDCYMSVVVTERTLEQIHECHG 145
Score = 90.2 bits (214), Expect = 5e-17
Identities = 39/68 (57%), Positives = 49/68 (72%)
Frame = +3
Query: 510 YGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPRHAYDPKKQMGIYEEYQTYLSSYT 689
+GFDHYLLK ACDL S LALKLK+ +L L NG P A +P++Q + +EY+ YL YT
Sbjct: 144 HGFDHYLLKNRACDLRSALALKLKREVLQALQNGVPALADEPERQQEVLKEYRRYLEPYT 203
Query: 690 PEXIEWYG 713
PE I+WYG
Sbjct: 204 PEEIDWYG 211
Score = 68.9 bits (161), Expect = 1e-10
Identities = 25/48 (52%), Positives = 38/48 (79%)
Frame = +2
Query: 110 QLSKTFKKKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKW 253
+L +K+ GRF+ G+ ++LP AY+KFWREWK+ PAAVH++P+E +W
Sbjct: 10 KLLNGWKRPGRFDKGLGAQLPEAYRKFWREWKLTTPAAVHYIPKEQQW 57
>UniRef50_UPI00015B5D75 Cluster: PREDICTED: similar to GA17686-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA17686-PA - Nasonia vitripennis
Length = 279
Score = 103 bits (246), Expect = 7e-21
Identities = 44/83 (53%), Positives = 64/83 (77%)
Frame = +1
Query: 268 TGETYPIQNIPIPLKFPAEINEGIWGGEAVVKGFQKRDDRRRRVPHYWVPVLKRTVVRSE 447
+G+ P+QNIP+PLK+P EI++GIWGGEAVV+GF K+ + RRVPH+WVP L ++V+ SE
Sbjct: 62 SGDILPVQNIPLPLKYPKEIDQGIWGGEAVVQGFTKK-FKHRRVPHFWVPKLLKSVIYSE 120
Query: 448 VLNTHLSVTVTDRTISLINDPMG 516
+L+ ++ VT R + LI+D G
Sbjct: 121 ILDKYVKTIVTYRALQLIHDNYG 143
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPRHAYDPKKQMGIYEEYQTYLSSY 686
+YGFDHY+LKT ACDL S+LALKLK+ +L +L + + DP KQ +Y +Y+ YL +Y
Sbjct: 141 NYGFDHYVLKTKACDLRSLLALKLKREMLIQLWDK-TLYPNDPIKQEEVYAKYEHYLPNY 199
Query: 687 TPEXIEWYG 713
T E IEWYG
Sbjct: 200 TREEIEWYG 208
Score = 60.9 bits (141), Expect = 4e-08
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 131 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKW 253
K R+ GI + LP YKKFW+EWKV KPA VH++P+ G+W
Sbjct: 17 KVTRWSNGIGAALPEEYKKFWKEWKVQKPAPVHYIPKPGRW 57
>UniRef50_UPI0000E46F94 Cluster: PREDICTED: similar to MGC84279
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC84279 protein -
Strongylocentrotus purpuratus
Length = 306
Score = 66.1 bits (154), Expect = 1e-09
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Frame = +1
Query: 205 GTEASSCTFRSSRREVERDELTGETYPIQNIPIPLKFPAEINEGIWGGEAVVKGFQK-RD 381
G E S+ + E E+D +TG+ + +PI +P E G+WGGE VKG++K +
Sbjct: 61 GFEPSAVHWDDKGVEWEKDPITGDRKRVNRVPIQAYYPPEARVGLWGGEGWVKGYRKSKG 120
Query: 382 DRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTDRTISLINDPMG 516
DR R+ W + + SE+L+ + T+R + LI++ G
Sbjct: 121 DRGVRLNKTWKTYVATRKLESEILDKKFEIPATNRVMDLIDEAYG 165
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPRHAYDPKKQMGIYEEYQTYLSSY 686
+YGFD Y+L+TPA DL S++ + +K+ +L L + + DP+ + IY +Y+ ++
Sbjct: 163 AYGFDFYILQTPAEDLNSLVGMVVKRHLLLRLASPQDMYPDDPENRDRIYNKYKRFV--I 220
Query: 687 TPEXIEWYG 713
E EW G
Sbjct: 221 PKEEAEWVG 229
>UniRef50_Q13084 Cluster: 39S ribosomal protein L28, mitochondrial
precursor; n=28; Euteleostomi|Rep: 39S ribosomal protein
L28, mitochondrial precursor - Homo sapiens (Human)
Length = 256
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 271 GETYPIQNIPIPLKFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRS 444
G+ ++++PIP+ FP E G+WGGE + G + D +R+ W P L S
Sbjct: 57 GQRERVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYS 116
Query: 445 EVLNTHLSVTVTDRTISLINDPMGL 519
E+L+ +VTVT RT+ LI++ GL
Sbjct: 117 EILDKKFTVTVTMRTLDLIDEAYGL 141
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTYLSS 683
+YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY++Y+ + +
Sbjct: 138 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF--A 195
Query: 684 YTPEXIEWYG 713
E EW G
Sbjct: 196 IPEEEAEWVG 205
>UniRef50_O76606 Cluster: Putative uncharacterized protein T25D3.2;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein T25D3.2 - Caenorhabditis elegans
Length = 310
Score = 60.5 bits (140), Expect = 5e-08
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Frame = +1
Query: 226 TFRSSRREVERDELTGETYPIQNIPIPLKFPAEINEGIWGGEAVVKGFQKRDD--RRRRV 399
T R + + E+ E PI I P E ++G+WGGE VVKG+ + +++ +
Sbjct: 70 TSRFAHDSFKNVEIELEENPIIGIRTP-----EGDDGLWGGERVVKGWIESAPYTKKKIL 124
Query: 400 PHYWVP-----VLKRTVVRSEVLNTHLSVTVTDRTISLINDPMGL 519
P YWVP LK V+ SE+L+ ++ VTVT+R + LI++ GL
Sbjct: 125 PRYWVPKLFFPALKNVVLYSEILDKYIKVTVTERAMRLIDEHFGL 169
>UniRef50_Q5D9B2 Cluster: SJCHGC01033 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01033 protein - Schistosoma
japonicum (Blood fluke)
Length = 260
Score = 57.2 bits (132), Expect = 5e-07
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +1
Query: 256 RDELTGETYPIQNIPIPLK--FPAEINEGIWGGEAVVKGFQKRDDRRRRVPHYWVPVLKR 429
+D TG P PL +P E + +WGGE +++G+ ++ ++R + P W PVL
Sbjct: 44 KDGQTGNVLPSSYFDTPLNIIYPPESQKCLWGGEGIIQGYWEKKNQRPKFPKAWRPVLME 103
Query: 430 TVVRSEVLNTHLSVTVTDRTISLINDPMG 516
+ SE+L+ + + V+D + I + G
Sbjct: 104 NLFYSEILDRWMVIIVSDSALKQIENAGG 132
>UniRef50_Q4TDV8 Cluster: Chromosome undetermined SCAF6006, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF6006,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 157
Score = 41.1 bits (92), Expect = 0.033
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTEL-MNGCPRHAYDPKKQMGIYEEYQ 668
+YGFD Y+LKTP DL S L + LK+ +L L + DP ++ +Y +Y+
Sbjct: 42 AYGFDFYILKTPKEDLNSKLGMDLKRAMLLRLARRSTELYPNDPARRDRVYGKYK 96
>UniRef50_Q8N8G8 Cluster: CDNA FLJ39525 fis, clone PUAEN2002758;
n=1; Homo sapiens|Rep: CDNA FLJ39525 fis, clone
PUAEN2002758 - Homo sapiens (Human)
Length = 158
Score = 38.3 bits (85), Expect = 0.23
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 271 GETYPIQNIPIPLKFPAEINEGIWGGEAVVKG 366
G+ ++++PIP+ FP E G+WGGE + G
Sbjct: 57 GQRERVEDVPIPIYFPPESQRGLWGGEGWILG 88
>UniRef50_Q8YPQ1 Cluster: Serine/threonine kinase; n=3;
Nostocaceae|Rep: Serine/threonine kinase - Anabaena sp.
(strain PCC 7120)
Length = 370
Score = 36.3 bits (80), Expect = 0.95
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 283 PIQNIPIPLKFPAEINEGI--WGGEAVVKGFQKRDDRRRRVPHYWVPVLKRTVVRSEVLN 456
P++ I L+ P IN GI W +A++ G + + + R + W+ + + + +
Sbjct: 219 PLRAIGTSLEEPKNINSGISDWVNQAILTGMEIKPENRPQSIEEWINFFEVLPKKYKSRS 278
Query: 457 THLSVTVTDRTISLINDPMGLTIIY*R 537
+ +S +++ I ++N G+TI + R
Sbjct: 279 SIISKSISKSVIKILNGVPGMTIAHHR 305
>UniRef50_Q018G8 Cluster: C-4 sterol methyl oxidase; n=2;
Ostreococcus|Rep: C-4 sterol methyl oxidase -
Ostreococcus tauri
Length = 315
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -3
Query: 289 VSDKFHQSIRRVPLPFLRNEM--YSCWLQYLPLTPKFFISRWKL*RNPNFKSSFLLKCFR 116
+ ++FH + PL F +E+ + W+ +L + + +WK+ R + ++KC
Sbjct: 26 ILERFHPFVIAGPLTFAYHELVYFGAWMPWLAMDRFEYFQKWKIQREKRPSAEMVMKCVV 85
Query: 115 QLTRSYL 95
+L +S++
Sbjct: 86 KLLKSHV 92
>UniRef50_Q5CSU7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 289
Score = 35.1 bits (77), Expect = 2.2
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +1
Query: 301 IPLKFPAEINEGIWGGEAVVKGFQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVT 480
+PL+ I + E VV F K R RRV + + R+ +N LS +
Sbjct: 199 VPLEIKTSIFAAYFAAEPVVIHFSKTISRNRRVKYGQEIAVAEAFPRT--INNSLSSIIL 256
Query: 481 ---DRTISLINDPMGLTIIY*RLLLVI 552
D TIS+IN GL I R+ LVI
Sbjct: 257 ARCDGTISIINQTKGLPIQSTRMFLVI 283
>UniRef50_A7HQK0 Cluster: Glycosyl transferase family 2; n=1;
Parvibaculum lavamentivorans DS-1|Rep: Glycosyl
transferase family 2 - Parvibaculum lavamentivorans DS-1
Length = 917
Score = 33.9 bits (74), Expect = 5.1
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Frame = -2
Query: 395 LRRLSSRFWKPLTTASPPHI----PSLISA 318
++R + WKPL+TA PPHI P L+ A
Sbjct: 184 IKRAKEKIWKPLSTAEPPHIWLNNPDLVDA 213
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,667,540
Number of Sequences: 1657284
Number of extensions: 14530764
Number of successful extensions: 38208
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 37011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38194
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72553824147
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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