Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0057.Seq
(583 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 163 2e-39
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 146 3e-34
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 136 3e-31
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 114 2e-24
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 111 1e-23
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 81 2e-14
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 66 6e-10
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 62 7e-09
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 62 7e-09
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 58 2e-07
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 56 8e-07
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 56 8e-07
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 55 1e-06
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 54 2e-06
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 54 2e-06
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 54 2e-06
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 54 3e-06
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 49 9e-05
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 49 9e-05
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 48 2e-04
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 47 4e-04
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 45 0.002
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 44 0.002
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 44 0.002
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 44 0.003
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 43 0.005
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 43 0.005
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 43 0.006
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 43 0.006
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 42 0.008
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 42 0.011
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 42 0.014
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 39 0.099
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 37 0.30
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 37 0.30
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 37 0.30
UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127... 37 0.40
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 37 0.40
UniRef50_A3FQM9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.53
UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2; ... 36 0.53
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 35 1.2
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 33 4.9
UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 163 bits (397), Expect = 2e-39
Identities = 75/89 (84%), Positives = 81/89 (91%)
Frame = -1
Query: 520 REPPREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 341
R R+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ
Sbjct: 14 RSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 73
Query: 340 LIKNGKKVTAFVPRDGCLNHIEENDEVLV 254
LIKNGKK+TAFVP DGCLN IEENDEVLV
Sbjct: 74 LIKNGKKITAFVPNDGCLNFIEENDEVLV 102
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = -3
Query: 254 AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 132
AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK KKERPRS
Sbjct: 103 AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 146 bits (354), Expect = 3e-34
Identities = 68/99 (68%), Positives = 81/99 (81%), Gaps = 1/99 (1%)
Frame = -1
Query: 547 PRNTNGA*A-REPPREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 371
PR N A R R RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQPN
Sbjct: 6 PRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPN 65
Query: 370 SAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 254
SAIRKCVRVQLIKNGKKVTAFVP DGCLN ++ENDEVL+
Sbjct: 66 SAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLL 104
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -3
Query: 254 AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 132
AGFGRKG A GDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 105 AGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 136 bits (330), Expect = 3e-31
Identities = 60/83 (72%), Positives = 69/83 (83%)
Frame = -1
Query: 508 REQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKN 329
R QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+EAKQPNSAI KC RVQL+KN
Sbjct: 89 RNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAICKCARVQLVKN 147
Query: 328 GKKVTAFVPRDGCLNHIEENDEV 260
GKK+ AFVP DGCLN I+EN V
Sbjct: 148 GKKIAAFVPNDGCLNFIKENGPV 170
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 114 bits (274), Expect = 2e-24
Identities = 50/82 (60%), Positives = 66/82 (80%)
Frame = -1
Query: 499 RWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 320
RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+R+QLIKNG++
Sbjct: 19 RWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCIRIQLIKNGRQ 78
Query: 319 VTAFVPRDGCLNHIEENDEVLV 254
+TAF P DG +N I+E+DEV +
Sbjct: 79 ITAFCPGDGAINFIDEHDEVTI 100
Score = 42.3 bits (95), Expect = 0.008
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = -3
Query: 245 GRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 138
GR G + GDIPGVRF+V KV +VSL + K+++P
Sbjct: 105 GRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKRDKP 140
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 111 bits (267), Expect = 1e-23
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -1
Query: 499 RWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK 320
RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN+A+RKCVRVQL+KNGK
Sbjct: 24 RWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKV 83
Query: 319 VTAFVPRDGCLNHIEENDEVLV 254
VTAFVP DG LN+I E+DEV++
Sbjct: 84 VTAFVPLDGSLNYINEHDEVVI 105
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -3
Query: 245 GRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 138
G +G ++GDIPGVRFKV+KV VSL A+++ KK++P
Sbjct: 110 GPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 81.0 bits (191), Expect = 2e-14
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -3
Query: 254 AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 132
AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 229 AGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 66.1 bits (154), Expect = 6e-10
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = -1
Query: 520 REPPREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 341
R ++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN+A+RKCV
Sbjct: 17 RRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVTPD 76
Query: 340 LIKN 329
+ N
Sbjct: 77 TLIN 80
Score = 53.6 bits (123), Expect = 3e-06
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -1
Query: 355 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 254
CVRVQL KNGK VTAFVP DG LN I E+DEV++
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVII 619
Score = 46.0 bits (104), Expect = 7e-04
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = -3
Query: 245 GRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 138
G +G A GD+PGVRFKV KV VSL A+ KK++P
Sbjct: 624 GPEGRAYGDLPGVRFKVTKVNGVSLKAILLGKKQKP 659
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 64.1 bits (149), Expect = 2e-09
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +3
Query: 285 FRQPSRGTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 422
F+QPS GT AVTF PFL++ T TH +AE GCL S P FS+T+P A
Sbjct: 57 FKQPSFGTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = +1
Query: 124 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPA 255
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPA 46
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 62.5 bits (145), Expect = 7e-09
Identities = 34/75 (45%), Positives = 51/75 (68%)
Frame = -1
Query: 445 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEEND 266
NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++P G ++++E++
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIP--GIGHNLQEHN 139
Query: 265 EVLVRDSVVKVTPSV 221
VL R + P V
Sbjct: 140 IVLCRVGRCRDVPGV 154
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 62.5 bits (145), Expect = 7e-09
Identities = 35/83 (42%), Positives = 53/83 (63%)
Frame = -1
Query: 469 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 290
H+ + NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69
Query: 289 LNHIEENDEVLVRDSVVKVTPSV 221
++++E++ VLVR +K P V
Sbjct: 70 GHNLQEHNVVLVRVGRLKDCPGV 92
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/71 (42%), Positives = 39/71 (54%)
Frame = +2
Query: 290 ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHV 469
A + G E L VLNEL+ DA DGR+ L F + ++LC+R T +R+ L V
Sbjct: 21 AAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQV 80
Query: 470 GFLEFFVRPSL 502
GFL FV P L
Sbjct: 81 GFLVLFVMPLL 91
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 55.6 bits (128), Expect = 8e-07
Identities = 29/71 (40%), Positives = 38/71 (53%)
Frame = +2
Query: 290 ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHV 469
A + G E L VLNEL+ DA DGR+ L F + ++LC+R +R+ L V
Sbjct: 52 AAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQV 111
Query: 470 GFLEFFVRPSL 502
GFL FV P L
Sbjct: 112 GFLVLFVMPLL 122
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 55.6 bits (128), Expect = 8e-07
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = -1
Query: 457 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 278
K KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G +++
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNL 74
Query: 277 EENDEVLVRDSVVKVTPSVTF 215
+E+ VLVR VK P V +
Sbjct: 75 QEHSIVLVRGGRVKDLPGVRY 95
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/68 (39%), Positives = 47/68 (69%)
Frame = -1
Query: 418 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVRDSVV 239
+G++L + ++ K+PNSA+RKC RV+L NGK ++A +P +G ++++E+ VLVR V
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRGGRV 146
Query: 238 KVTPSVTF 215
+ P V +
Sbjct: 147 QDVPGVKY 154
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = -1
Query: 469 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 290
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112
Query: 289 LNHIEENDEVLVRDSVVKVTPSV 221
++++E++ VL R ++ P V
Sbjct: 113 GHNLQEHNIVLCRVGRLQDVPGV 135
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = -1
Query: 469 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 290
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 289 LNHIEENDEVLVRDSVVKVTPSV 221
++++E++ VL R ++ P V
Sbjct: 99 GHNLQEHNIVLCRVGRLQDVPGV 121
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 54.0 bits (124), Expect = 2e-06
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = -1
Query: 442 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 263
P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+P +G ++++E++
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNI 118
Query: 262 VLVRDSVVKVTPSV 221
VLV + P V
Sbjct: 119 VLVEGGRTQDLPGV 132
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 53.6 bits (123), Expect = 3e-06
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = -1
Query: 469 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 290
H+ + P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 116
Query: 289 LNHIEENDEVLVRDSVVKVTPSV 221
++++E++ VL R V+ P V
Sbjct: 117 GHNLQEHNIVLCRVGRVQDCPGV 139
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 48.8 bits (111), Expect = 9e-05
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = -1
Query: 433 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 254
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +VLV
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 253 R 251
+
Sbjct: 129 K 129
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 48.8 bits (111), Expect = 9e-05
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = -1
Query: 457 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 278
K K+ +GI L V K+PNSA+RK RV+L G +VTA++P G +++
Sbjct: 18 KTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNL 74
Query: 277 EENDEVLVRDSVVKVTPSVTF 215
+E+ VLVR VK P V +
Sbjct: 75 QEHAVVLVRGGRVKDLPGVRY 95
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 48.0 bits (109), Expect = 2e-04
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -1
Query: 472 AHMGTKWKANP--FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 299
A TK K++ G K + + + ++PNSA+RK RV+L NG+ TA++P
Sbjct: 62 ARKSTKRKSSVPLLDGCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPG 120
Query: 298 DGCLNHIEENDEVLVRDSVVKVTPSVTF 215
+G ++++E+ VLVR K P V +
Sbjct: 121 EG--HNLQEHSVVLVRGGGAKDLPGVRY 146
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 46.8 bits (106), Expect = 4e-04
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = -1
Query: 451 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 272
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 271 NDEVLVRDSVVKVTPSV 221
+ VLV + P V
Sbjct: 105 HQIVLVEGGRTQDLPGV 121
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = -1
Query: 433 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 254
G+ +G+ V+ K+PNSA+RK RV+L G+ VTA++P G ++ +E+ VL+
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQEHAVVLL 103
Query: 253 RDSVVKVTPSVTF 215
R + P V +
Sbjct: 104 RGGRAQDCPGVQY 116
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 44.4 bits (100), Expect = 0.002
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = -1
Query: 478 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 299
+K K + G KG+ L+ + K+PNS RK R++L NG VT ++P
Sbjct: 90 RKGKRARKTTSPALVGRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPG 148
Query: 298 DGCLNHIEENDEVLVRDSVVKVTPSVTF-----PEFVLRW 194
+G ++I+++ VL+R + P V + FV RW
Sbjct: 149 EG--HNIQQHSVVLIRGGRAQDCPGVRYICPWSVGFVWRW 186
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = -1
Query: 418 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVRDSVV 239
KG+VL + ++ K+PNSA RK RV+L NG V+A++P +G + +E+ V VR
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG--HDAQEHSIVYVRGGRC 115
Query: 238 KVTPSVTF 215
+ P V +
Sbjct: 116 QDLPGVKY 123
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2
Query: 293 TVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFR 460
TV+ +E HFL VL EL++DA ++G V LL F + DDA C +E + L R
Sbjct: 66 TVSWNESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR 121
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 43.2 bits (97), Expect = 0.005
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -1
Query: 460 TKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNH 281
TK K+ KGI ++ K+PNSA RK +V L NGK + ++ +G +
Sbjct: 17 TKSKSIALIQCPQKKGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HT 73
Query: 280 IEENDEVLVRDSVVKVTPSVTF 215
++E+ VLVR VK P V +
Sbjct: 74 LQEHSLVLVRGGRVKDLPGVQY 95
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 43.2 bits (97), Expect = 0.005
Identities = 29/79 (36%), Positives = 43/79 (54%)
Frame = -1
Query: 451 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 272
++NPF G+ L V K+PNSA+RK V+L N + V A++P G + ++E
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76
Query: 271 NDEVLVRDSVVKVTPSVTF 215
+D VLVR V P V +
Sbjct: 77 HDRVLVRGGQVPDLPGVKY 95
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 42.7 bits (96), Expect = 0.006
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = -1
Query: 415 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVRDSVVK 236
G+ L K+PNSA+RK +V+L N + A++P +G ++++E+ VL+R VK
Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRGGRVK 88
Query: 235 VTPSVTF 215
P V F
Sbjct: 89 DLPGVKF 95
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/88 (26%), Positives = 51/88 (57%)
Frame = -1
Query: 478 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 299
K + + K ++ F KG+ ++ K+PNSA+RK +++L KN K++ A++P
Sbjct: 9 KHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPG 67
Query: 298 DGCLNHIEENDEVLVRDSVVKVTPSVTF 215
+G + +++++ VL++ V+ P + +
Sbjct: 68 EG--HALQDHNFVLIKKGRVQDLPGIKY 93
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 42.3 bits (95), Expect = 0.008
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -3
Query: 254 AGFGRKGHAVGDIPGVRFKVVK 189
+GFG KGHAVGDI GVRF+VVK
Sbjct: 72 SGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 41.9 bits (94), Expect = 0.011
Identities = 26/74 (35%), Positives = 40/74 (54%)
Frame = -1
Query: 436 GGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVL 257
G +G+ L K+PNSA+ K +V+L N V A++P +G ++++E+ VL
Sbjct: 88 GKCPQKQGVCLRVSTRTPKKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVL 144
Query: 256 VRDSVVKVTPSVTF 215
VR VK P V F
Sbjct: 145 VRGGRVKDLPGVKF 158
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 41.5 bits (93), Expect = 0.014
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -1
Query: 400 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVRDSVVKVTPS 224
+VG+ + K+PNS RK RV+L GK +TA++P +G ++I+++ VLVR + P
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRGGRSQDCPG 105
Query: 223 VTF 215
V +
Sbjct: 106 VRY 108
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 38.7 bits (86), Expect = 0.099
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = -1
Query: 418 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVRDSVV 239
KG+ ++ + K+PNSA RKC ++L NGK ++A++P G ++E+ V+ V
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEGGRV 92
Query: 238 KVTPSVTF 215
+ P + +
Sbjct: 93 QDCPGIKY 100
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 37.1 bits (82), Expect = 0.30
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = -1
Query: 418 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVRDSVV 239
+G + + + K+PNSA RK ++L KN KK+ A++P G + + + VL+R
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRGGNT 84
Query: 238 KVTPSV 221
+ P V
Sbjct: 85 RDLPGV 90
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 37.1 bits (82), Expect = 0.30
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = -1
Query: 382 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVRDSVVKVTPSVTF 215
K+PNSA+RK ++ L N K V A+VP + + I +N VL++ V P V +
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLIKGGNVPDLPGVKY 94
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 37.1 bits (82), Expect = 0.30
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = -1
Query: 433 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 254
G KG+ + V ++PNS +RK RV+L G+ VT VP +G +++ + VLV
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLV 183
Query: 253 R 251
R
Sbjct: 184 R 184
>UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127;
n=3; Zea mays|Rep: Putative uncharacterized protein
orf127 - Zea mays (Maize)
Length = 127
Score = 36.7 bits (81), Expect = 0.40
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = -1
Query: 418 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVRDSVV 239
+G+ L K+PNSA+RK +V+L N + A +P +G ++ +E+ VLVR V
Sbjct: 63 QGVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAHIPGEG--HNSQEHSIVLVRGGRV 119
Query: 238 KVTP 227
K +P
Sbjct: 120 KDSP 123
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 36.7 bits (81), Expect = 0.40
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = -1
Query: 382 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVRDSVVKVTPSVTF 215
K+ NSA+RK RV+L +G ++T ++P G ++ +E+ VLVR VK P+V +
Sbjct: 176 KKSNSALRKVARVRL-TSGFEITTYIP--GIGHNSQEHFVVLVRGGRVKDLPNVRY 228
>UniRef50_A3FQM9 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 226
Score = 36.3 bits (80), Expect = 0.53
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 23 LFFCCTQYLLCTRILHFMNL*TTRFPTAGHLSQCTPMILVAPFSLCRERGETRWLL 190
L+F C +YL + N T F +G L++C I+ P +CRER + + L
Sbjct: 75 LYFSCYEYLKRLKFKFIENRDLTNF-ISGFLAECVSCIIWVPVDICRERSQLDYYL 129
>UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 507
Score = 36.3 bits (80), Expect = 0.53
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = -1
Query: 484 EFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 305
+F+ G W N F A G + E + E K+PN++ + + + + +G TAF
Sbjct: 231 DFRTFKQGLLWGGNVFYFADKFPGQI-ESLVNELKKPNASDQTHIMISIGHSGAMATAFG 289
Query: 304 PRDGCLNHIEENDEV---LVRDSVVKVTPSV 221
CLN N+ V V D K+TP +
Sbjct: 290 APIMCLNQAYYNEPVENPPVLDPFTKMTPQI 320
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 35.1 bits (77), Expect = 1.2
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = -1
Query: 433 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 254
G KG+ ++ V+ K+PNSA RK +++L + + A++P G ++++E VLV
Sbjct: 26 GCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLV 82
Query: 253 RDSVVKVTPSVTF 215
P V +
Sbjct: 83 SGGRAPDLPGVRY 95
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 33.1 bits (72), Expect = 4.9
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -1
Query: 382 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVRDSVVKVTPSVTF 215
K+PNSA+RK +V+L N V +P +G ++++E+ +L R V+ P V +
Sbjct: 46 KKPNSALRKVAKVRL-SNKTTVIVAIPGEG--HNLKEHAIILFRGGRVRDLPGVKY 98
>UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1;
Mesorhizobium sp. BNC1|Rep: Putative uncharacterized
protein - Mesorhizobium sp. (strain BNC1)
Length = 338
Score = 32.3 bits (70), Expect = 8.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 327 PFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 422
P + R+H ++ E+ C + P +S T+PFA
Sbjct: 240 PTAFNSARSHNKILEIACFGAAPVYSSTVPFA 271
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,561,721
Number of Sequences: 1657284
Number of extensions: 13108903
Number of successful extensions: 29335
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 28626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29322
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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