Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0009
         (511 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    51   1e-05
UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    33   2.8  
UniRef50_A5EH56 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 51.2 bits (117), Expect = 1e-05
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = -1

Query: 235 LLLRWVXELTSQLVVKWLLEPIDIYNVNAPPTLRYKF 125
           LLLRWV ELT+ LV+     P  +Y+VNAPPT RYKF
Sbjct: 155 LLLRWVDELTAHLVLSGYWSPRHLYDVNAPPTSRYKF 191


>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -2

Query: 129 NSKIXV*LQRLPRXSNRNALLLHGRNRQGGGTYPRGL 19
           N  I + L      + RNALL+HG N  G  TY RGL
Sbjct: 98  NGSILLDLVEADVSTKRNALLVHGFNGSGNSTYMRGL 134


>UniRef50_A5EH56 Cluster: Putative uncharacterized protein; n=1;
          Bradyrhizobium sp. BTAi1|Rep: Putative uncharacterized
          protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
          BAA-1182)
          Length = 164

 Score = 31.9 bits (69), Expect = 8.7
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +3

Query: 36 YHRPAYFCREAVTRFGSXGG 95
          Y R AYF  EAVTRFG+ GG
Sbjct: 37 YRRRAYFDYEAVTRFGARGG 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,144,607
Number of Sequences: 1657284
Number of extensions: 7990632
Number of successful extensions: 14625
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14624
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)