Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C05f
(403 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P51425 Cluster: 60S ribosomal protein L39; n=9; Poaceae... 89 2e-17
UniRef50_Q96EH5 Cluster: 60S ribosomal protein L39-like; n=113; ... 83 2e-15
UniRef50_Q4N5K7 Cluster: 60S ribosomal protein L39, putative; n=... 80 2e-14
UniRef50_A0DH83 Cluster: Chromosome undetermined scaffold_50, wh... 73 2e-12
UniRef50_A0D4U2 Cluster: Chromosome undetermined scaffold_38, wh... 73 2e-12
UniRef50_A0BVU9 Cluster: Chromosome undetermined scaffold_130, w... 73 2e-12
UniRef50_UPI00006CB3D9 Cluster: Ribosomal L39 protein; n=1; Tetr... 71 9e-12
UniRef50_UPI0001509BE0 Cluster: hypothetical protein TTHERM_0052... 69 5e-11
UniRef50_UPI0000D99F63 Cluster: PREDICTED: similar to 60S riboso... 59 3e-08
UniRef50_A1CZG2 Cluster: Ribosomal protein L39, putative; n=1; N... 57 1e-07
UniRef50_Q4RTC8 Cluster: Chromosome 1 SCAF14998, whole genome sh... 56 2e-07
UniRef50_Q4TI53 Cluster: Chromosome undetermined SCAF2397, whole... 56 3e-07
UniRef50_Q8SQP8 Cluster: 60S ribosomal protein L39; n=1; Encepha... 54 1e-06
UniRef50_UPI00015BAD96 Cluster: LSU ribosomal protein L39E; n=1;... 52 3e-06
UniRef50_P49591 Cluster: Seryl-tRNA synthetase, cytoplasmic (EC ... 52 6e-06
UniRef50_P13005 Cluster: 50S ribosomal protein L39e; n=10; Archa... 51 7e-06
UniRef50_Q5C1K0 Cluster: SJCHGC08432 protein; n=1; Schistosoma j... 49 4e-05
UniRef50_P54056 Cluster: 50S ribosomal protein L39e; n=19; Archa... 48 5e-05
UniRef50_A5KAF6 Cluster: Seryl-tRNA synthetase, putative; n=6; P... 48 9e-05
UniRef50_A7D3F5 Cluster: Ribosomal protein L39e; n=1; Halorubrum... 46 2e-04
UniRef50_Q16VX1 Cluster: Putative uncharacterized protein; n=1; ... 46 4e-04
UniRef50_A0RW53 Cluster: Ribosomal protein L39; n=2; Thermoprote... 45 6e-04
UniRef50_UPI000056385E Cluster: serine--tRNA ligase; n=1; Giardi... 44 9e-04
UniRef50_Q8PYQ5 Cluster: 50S ribosomal protein L39e; n=19; Archa... 42 0.003
UniRef50_A5BLA2 Cluster: Putative uncharacterized protein; n=1; ... 41 0.011
UniRef50_A4R1J4 Cluster: Putative uncharacterized protein; n=1; ... 37 0.13
UniRef50_Q10QF5 Cluster: Seryl-tRNA synthetase, putative, expres... 37 0.17
UniRef50_A2XDK2 Cluster: Putative uncharacterized protein; n=2; ... 37 0.17
UniRef50_Q2UTJ1 Cluster: Seryl-tRNA synthetase; n=2; Eukaryota|R... 36 0.23
UniRef50_UPI00006CCCEB Cluster: conserved hypothetical protein; ... 36 0.40
UniRef50_O58265 Cluster: Putative uncharacterized protein PH0529... 35 0.52
UniRef50_Q01CG7 Cluster: Chromosome 03 contig 1, DNA sequence; n... 34 0.91
UniRef50_P07284 Cluster: Seryl-tRNA synthetase, cytoplasmic (EC ... 34 0.91
UniRef50_O94143 Cluster: Putative uncharacterized protein BUD19;... 33 2.1
UniRef50_Q01CG8 Cluster: Chromosome 03 contig 1, DNA sequence; n... 32 3.7
UniRef50_A2DTH8 Cluster: PHD-finger family protein; n=1; Trichom... 32 4.9
UniRef50_Q2GW59 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
>UniRef50_P51425 Cluster: 60S ribosomal protein L39; n=9;
Poaceae|Rep: 60S ribosomal protein L39 - Zea mays
(Maize)
Length = 51
Score = 89.4 bits (212), Expect = 2e-17
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 59
KTF IK+KLAKK++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 5 KTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49
>UniRef50_Q96EH5 Cluster: 60S ribosomal protein L39-like; n=113;
Eukaryota|Rep: 60S ribosomal protein L39-like - Homo
sapiens (Human)
Length = 51
Score = 83.0 bits (196), Expect = 2e-15
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
KTF IKR LAKK KQNRPIPQW++M+ G+ IRYN+KRRHWRRTKL L
Sbjct: 5 KTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
>UniRef50_Q4N5K7 Cluster: 60S ribosomal protein L39, putative; n=1;
Theileria parva|Rep: 60S ribosomal protein L39, putative
- Theileria parva
Length = 79
Score = 79.8 bits (188), Expect = 2e-14
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
+T +K+ L KK+KQNRPIP W R++TGN IRYNAKRR+WRRTKLK+
Sbjct: 33 RTLTLKKHLGKKMKQNRPIPHWFRLKTGNKIRYNAKRRYWRRTKLKV 79
>UniRef50_A0DH83 Cluster: Chromosome undetermined scaffold_50, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_50,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 93
Score = 72.9 bits (171), Expect = 2e-12
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
K+ +K++L K KQNRP+P W R RT NTIRYN+KRRHWRRTKL +
Sbjct: 46 KSLRMKKRLIKANKQNRPLPNWFRYRTDNTIRYNSKRRHWRRTKLNI 92
>UniRef50_A0D4U2 Cluster: Chromosome undetermined scaffold_38, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_38,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 131
Score = 72.9 bits (171), Expect = 2e-12
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
K+ +K++L K KQNRP+P W R RT NTIRYN+KRRHWRRTKL +
Sbjct: 84 KSLRMKKRLIKANKQNRPLPNWFRYRTDNTIRYNSKRRHWRRTKLNI 130
>UniRef50_A0BVU9 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_130,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 137
Score = 72.9 bits (171), Expect = 2e-12
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
K+ +K++L K KQNRP+P W R RT NTIRYN+KRRHWRRTKL +
Sbjct: 90 KSLRMKKRLIKANKQNRPLPNWFRYRTDNTIRYNSKRRHWRRTKLNI 136
>UniRef50_UPI00006CB3D9 Cluster: Ribosomal L39 protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L39 protein
- Tetrahymena thermophila SB210
Length = 89
Score = 70.9 bits (166), Expect = 9e-12
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = -1
Query: 238 SNTSSLVSLVPIRHG--KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRT 65
SN + L S+ G KT +K++ +K+KQNRP+P W R ++ IRYN+KRR+WRRT
Sbjct: 25 SNRAKLKSIYQENQGANKTLNMKKRFGRKIKQNRPLPNWYRYKSDTNIRYNSKRRNWRRT 84
Query: 64 KLKL 53
KLK+
Sbjct: 85 KLKI 88
>UniRef50_UPI0001509BE0 Cluster: hypothetical protein
TTHERM_00526400; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00526400 - Tetrahymena
thermophila SB210
Length = 121
Score = 68.5 bits (160), Expect = 5e-11
Identities = 26/47 (55%), Positives = 37/47 (78%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
KT +K++ +K+KQNRP+P W R ++ IRYN+KRR+WRRTKLK+
Sbjct: 74 KTLNMKKRFGRKIKQNRPLPNWYRYKSDTNIRYNSKRRNWRRTKLKI 120
>UniRef50_UPI0000D99F63 Cluster: PREDICTED: similar to 60S ribosomal
protein L39; n=2; Catarrhini|Rep: PREDICTED: similar to
60S ribosomal protein L39 - Macaca mulatta
Length = 102
Score = 59.3 bits (137), Expect = 3e-08
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAK 86
KTF IK+ LA+K KQNRPIPQW++M+TG+ IRYN+K
Sbjct: 5 KTFKIKQFLAQKQKQNRPIPQWIQMKTGDKIRYNSK 40
>UniRef50_A1CZG2 Cluster: Ribosomal protein L39, putative; n=1;
Neosartorya fischeri NRRL 181|Rep: Ribosomal protein
L39, putative - Neosartorya fischeri (strain ATCC 1020 /
DSM 3700 / NRRL 181)(Aspergillus fischerianus (strain
ATCC 1020 / DSM 3700 / NRRL 181))
Length = 69
Score = 56.8 bits (131), Expect = 1e-07
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = -1
Query: 229 SSLVSLVPIRHGKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIR 98
S +V P H K+F K+KLAK +QNRPIPQW+R+RTGNTIR
Sbjct: 27 SLVVDTEPDSH-KSFRTKQKLAKAQRQNRPIPQWIRLRTGNTIR 69
>UniRef50_Q4RTC8 Cluster: Chromosome 1 SCAF14998, whole genome
shotgun sequence; n=6; Fungi/Metazoa group|Rep:
Chromosome 1 SCAF14998, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 503
Score = 56.4 bits (130), Expect = 2e-07
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTI 101
KTF IKR LAKK KQNRPIPQW+RM+TGN I
Sbjct: 432 KTFRIKRFLAKKQKQNRPIPQWIRMKTGNKI 462
>UniRef50_Q4TI53 Cluster: Chromosome undetermined SCAF2397, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF2397,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 175
Score = 55.6 bits (128), Expect = 3e-07
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +1
Query: 298 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
MVLDLDLFR DK G+P+ +RE+Q+KRFKDV L D
Sbjct: 1 MVLDLDLFRTDKGGDPEIVRESQRKRFKDVTLVD 34
>UniRef50_Q8SQP8 Cluster: 60S ribosomal protein L39; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L39
- Encephalitozoon cuniculi
Length = 52
Score = 53.6 bits (123), Expect = 1e-06
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
KT ++K +L + LK+NR IP W RM + YN RRHWR KLK+
Sbjct: 5 KTALVKTRLMRALKRNREIPAWKRMMKEHKGEYNRARRHWRSKKLKI 51
>UniRef50_UPI00015BAD96 Cluster: LSU ribosomal protein L39E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L39E - Ignicoccus hospitalis KIN4/I
Length = 55
Score = 52.4 bits (120), Expect = 3e-06
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = -1
Query: 214 LVPIRHGKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLK 56
+V + H K K +L KK KQNR +P WV ++T + N RR+WRR K+K
Sbjct: 1 MVRVAHYKHVAKKIRLGKKTKQNRALPAWVILKTRRRVTRNPMRRYWRRQKIK 53
>UniRef50_P49591 Cluster: Seryl-tRNA synthetase, cytoplasmic (EC
6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase); n=74;
Eumetazoa|Rep: Seryl-tRNA synthetase, cytoplasmic (EC
6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase) - Homo
sapiens (Human)
Length = 514
Score = 51.6 bits (118), Expect = 6e-06
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 298 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
MVLDLDLFR DK G+P IRE Q+KRFKD L D
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVD 34
>UniRef50_P13005 Cluster: 50S ribosomal protein L39e; n=10;
Archaea|Rep: 50S ribosomal protein L39e - Sulfolobus
acidocaldarius
Length = 51
Score = 51.2 bits (117), Expect = 7e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = -1
Query: 178 KRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
K +L K LK+N PIP WV ++T IR+N RR+WRR LK+
Sbjct: 10 KLRLGKALKRNSPIPAWVIIKTQAEIRFNPLRRNWRRNNLKV 51
>UniRef50_Q5C1K0 Cluster: SJCHGC08432 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08432 protein - Schistosoma
japonicum (Blood fluke)
Length = 231
Score = 48.8 bits (111), Expect = 4e-05
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +1
Query: 298 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
MVLDLDLFR DK G+PD IR N+ KRF+ L D
Sbjct: 1 MVLDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVD 34
>UniRef50_P54056 Cluster: 50S ribosomal protein L39e; n=19;
Archaea|Rep: 50S ribosomal protein L39e - Methanococcus
jannaschii
Length = 51
Score = 48.4 bits (110), Expect = 5e-05
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = -1
Query: 178 KRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLK 56
K +LAK LKQNR +P +V ++T +R++ K R+WRR KLK
Sbjct: 10 KVRLAKALKQNRRVPLFVIVKTRGRVRFHPKMRYWRRKKLK 50
>UniRef50_A5KAF6 Cluster: Seryl-tRNA synthetase, putative; n=6;
Plasmodium|Rep: Seryl-tRNA synthetase, putative -
Plasmodium vivax
Length = 616
Score = 47.6 bits (108), Expect = 9e-05
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +1
Query: 298 MVLDLDLFRADKDGNPDKIRENQKKRFKD 384
MVLD++LFR +K GNP+KI+E++KKRF D
Sbjct: 67 MVLDINLFRKEKGGNPEKIKESEKKRFHD 95
>UniRef50_A7D3F5 Cluster: Ribosomal protein L39e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L39e -
Halorubrum lacusprofundi ATCC 49239
Length = 64
Score = 46.4 bits (105), Expect = 2e-04
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -1
Query: 178 KRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 59
K++LAK +QN +P WV M+T + N KRR+WRR L
Sbjct: 23 KKRLAKAERQNTRVPAWVMMKTDMNVTRNPKRRNWRRNDL 62
>UniRef50_Q16VX1 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 192
Score = 45.6 bits (103), Expect = 4e-04
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = -3
Query: 176 AQIGQKAETKQTHSSVGKDAHRKHYSI*R*EASLEKDKAQVVS 48
A+ QKAE KQTHS+V ++AH KHY + R SLE +A+ VS
Sbjct: 110 AEACQKAEAKQTHSTVDQNAHWKHYPLQRQAPSLETYEAEAVS 152
>UniRef50_A0RW53 Cluster: Ribosomal protein L39; n=2;
Thermoprotei|Rep: Ribosomal protein L39 - Cenarchaeum
symbiosum
Length = 52
Score = 44.8 bits (101), Expect = 6e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -1
Query: 178 KRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
K +L KK KQ P+P W+ ++T +R N KRR WR T +++
Sbjct: 10 KIRLQKKTKQAAPVPAWIILKTRRGVRTNPKRRAWRSTDVEV 51
>UniRef50_UPI000056385E Cluster: serine--tRNA ligase; n=1; Giardia
lamblia ATCC 50803|Rep: serine--tRNA ligase - Giardia
lamblia ATCC 50803
Length = 457
Score = 44.4 bits (100), Expect = 9e-04
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 298 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
MVLD++LFR K GNP+K++E+Q++R+ + D
Sbjct: 1 MVLDINLFRVSKGGNPEKVKESQRRRYASTEIVD 34
>UniRef50_Q8PYQ5 Cluster: 50S ribosomal protein L39e; n=19;
Archaea|Rep: 50S ribosomal protein L39e - Methanosarcina
mazei (Methanosarcina frisia)
Length = 51
Score = 42.3 bits (95), Expect = 0.003
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 178 KRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 59
K++LAK KQN +P W ++T + + +RRHWRR L
Sbjct: 9 KKRLAKAHKQNSRVPVWAIVKTNRKVVSHPRRRHWRRGSL 48
>UniRef50_A5BLA2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 466
Score = 40.7 bits (91), Expect = 0.011
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1
Query: 301 VLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
+LD++LFR DK NP+ IRE+Q++R+ +V L D
Sbjct: 1 MLDINLFREDKGHNPEIIRESQRRRYANVDLVD 33
>UniRef50_A4R1J4 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 443
Score = 37.1 bits (82), Expect = 0.13
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1
Query: 298 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
MVLD+ F ++ GNP+KIRE+Q++R V + D
Sbjct: 1 MVLDVTDFITERGGNPEKIRESQRRRHAPVEVVD 34
>UniRef50_Q10QF5 Cluster: Seryl-tRNA synthetase, putative,
expressed; n=4; Oryza sativa|Rep: Seryl-tRNA synthetase,
putative, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 445
Score = 36.7 bits (81), Expect = 0.17
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +1
Query: 301 VLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
+LD++LFR +K G+P+ IR++Q+ R V L D
Sbjct: 1 MLDINLFRTEKGGDPELIRKSQRNRSASVELVD 33
>UniRef50_A2XDK2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 393
Score = 36.7 bits (81), Expect = 0.17
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +1
Query: 301 VLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
+LD++LFR +K G+P+ IR++Q+ R V L D
Sbjct: 1 MLDINLFRTEKGGDPELIRKSQRNRSASVELVD 33
>UniRef50_Q2UTJ1 Cluster: Seryl-tRNA synthetase; n=2; Eukaryota|Rep:
Seryl-tRNA synthetase - Aspergillus oryzae
Length = 494
Score = 36.3 bits (80), Expect = 0.23
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +1
Query: 301 VLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
+LD+ F +D+ GNP+K++E+Q+KRF ++ D
Sbjct: 1 MLDIADFVSDRGGNPNKVKESQRKRFAPESVVD 33
>UniRef50_UPI00006CCCEB Cluster: conserved hypothetical protein;
n=1; Tetrahymena thermophila SB210|Rep: conserved
hypothetical protein - Tetrahymena thermophila SB210
Length = 427
Score = 35.5 bits (78), Expect = 0.40
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 214 LVPIRHGKTFIIKRKLAKKLKQNRPI-PQWVRMRTGNTIRYNAKRRHWRRTKLKL*ACEC 38
++PI+HGK L KKLKQN P WV+ N I+YN ++ + R L C
Sbjct: 238 IIPIKHGKY------LYKKLKQNSKYNPWWVKDANHNDIQYNNRQEFFERISNFLKYCSN 291
Query: 37 VKCN 26
N
Sbjct: 292 FSLN 295
>UniRef50_O58265 Cluster: Putative uncharacterized protein PH0529;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH0529 - Pyrococcus horikoshii
Length = 174
Score = 35.1 bits (77), Expect = 0.52
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = +3
Query: 9 YRVFITLHLTHSQAYNLSFVLLQ*RLLALYRIVFPVRILTH*GMGLFCFSFLANL 173
Y +F L HS ++LSFVLLQ L + + V +T G LFCF LA+L
Sbjct: 104 YNLFSGLDHPHSP-HSLSFVLLQCLLFGCVKTLLFVLTITQTGTLLFCFMALASL 157
>UniRef50_Q01CG7 Cluster: Chromosome 03 contig 1, DNA sequence;
n=1; Ostreococcus tauri|Rep: Chromosome 03 contig 1,
DNA sequence - Ostreococcus tauri
Length = 567
Score = 34.3 bits (75), Expect = 0.91
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1
Query: 97 YNAKRRHWRRTKL 59
YNAKRRHWRRTKL
Sbjct: 4 YNAKRRHWRRTKL 16
>UniRef50_P07284 Cluster: Seryl-tRNA synthetase, cytoplasmic (EC
6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase); n=43;
Eukaryota|Rep: Seryl-tRNA synthetase, cytoplasmic (EC
6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase) -
Saccharomyces cerevisiae (Baker's yeast)
Length = 462
Score = 34.3 bits (75), Expect = 0.91
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 301 VLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
+LD++ F DK GNP+ IR++QK R V + D
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVD 33
>UniRef50_O94143 Cluster: Putative uncharacterized protein BUD19;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein BUD19 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 102
Score = 33.1 bits (72), Expect = 2.1
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 50 LQLELCPSPVTPLSVISNSVSCAHPYPLRNGSVLFQLFGQFALNNKRL 193
L + L SPV+ LSV+++SV + PL SVL F L+++RL
Sbjct: 13 LDVHLGSSPVSSLSVVTDSVVGSQSDPLWQWSVLLLSLSHFLLDSERL 60
>UniRef50_Q01CG8 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 138
Score = 32.3 bits (70), Expect = 3.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 102 IVFPVRILTH*GMGLFCFSFLANLRLIINV 191
+V PVR+ H G G FCF F + LI+ V
Sbjct: 1 MVLPVRMRIHWGSGRFCFCFFPRIFLILKV 30
>UniRef50_A2DTH8 Cluster: PHD-finger family protein; n=1;
Trichomonas vaginalis G3|Rep: PHD-finger family protein
- Trichomonas vaginalis G3
Length = 589
Score = 31.9 bits (69), Expect = 4.9
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +3
Query: 177 LIINVFPCRIGTRETRDDVFDNFKEYFYICN 269
++I+VF + RE +++FD F+ +F+IC+
Sbjct: 235 IMIDVFESTLTRREFCEELFDRFRTFFFICH 265
>UniRef50_Q2GW59 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 608
Score = 31.1 bits (67), Expect = 8.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 328 DKDGNPDKIRENQKKRFKDVALXD 399
++ GNP+KIRE+Q+KR V + D
Sbjct: 197 ERGGNPEKIRESQRKRHAPVEVVD 220
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,342,954
Number of Sequences: 1657284
Number of extensions: 6727418
Number of successful extensions: 17266
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 16922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17266
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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