Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0040
(740 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 155 1e-36
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 131 2e-29
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 130 3e-29
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 127 3e-28
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 121 2e-26
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 118 1e-25
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 109 9e-23
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 107 2e-22
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 105 9e-22
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 103 3e-21
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 102 1e-20
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 102 1e-20
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 100 3e-20
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 98 2e-19
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 97 3e-19
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 96 9e-19
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 93 6e-18
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 91 3e-17
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 89 1e-16
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 88 2e-16
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 85 2e-15
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 81 3e-14
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 77 3e-13
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 77 3e-13
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 77 5e-13
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 71 2e-11
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 69 9e-11
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 66 6e-10
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 65 1e-09
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 62 1e-08
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 62 2e-08
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 46 7e-04
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 44 0.005
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 42 0.016
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.26
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 38 0.34
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 37 0.45
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 37 0.60
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 36 1.4
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.4
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase fam... 35 2.4
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 34 3.2
UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr prote... 34 4.2
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 34 4.2
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 4.2
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 5.6
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 7.4
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.4
UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor; ... 33 7.4
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 33 9.7
UniRef50_Q05TV6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_Q9XZR7 Cluster: Protease, reverse transcriptase, ribonu... 33 9.7
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 155 bits (375), Expect = 1e-36
Identities = 68/86 (79%), Positives = 81/86 (94%)
Frame = +2
Query: 260 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 439
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 440 RRIQRKGPLIIFNKDQGLTRAFRTSP 517
RR+ RKGPLII+NKDQGLTR+FR P
Sbjct: 65 RRLHRKGPLIIYNKDQGLTRSFRNIP 90
Score = 124 bits (300), Expect = 2e-27
Identities = 57/84 (67%), Positives = 65/84 (77%)
Frame = +1
Query: 487 GSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 666
G F +IPGV+ APGGH+GRF+IWTQSAF RLD +FGSWKTPSK+KK
Sbjct: 81 GLTRSFRNIPGVDMVNVNKLNLLHLAPGGHVGRFMIWTQSAFERLDAIFGSWKTPSKEKK 140
Query: 667 NFNLPQPKMANTDLTRLLKSDEIR 738
NFNLPQPKMANTDL+RLLKS+EIR
Sbjct: 141 NFNLPQPKMANTDLSRLLKSEEIR 164
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 131 bits (317), Expect = 2e-29
Identities = 58/87 (66%), Positives = 74/87 (85%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 139 SKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
Query: 437 RRRIQRKGPLIIFNKDQGLTRAFRTSP 517
RRRIQR+GP II+N+D G+ +AFR P
Sbjct: 199 RRRIQRRGPCIIYNEDNGIIKAFRNIP 225
Score = 129 bits (312), Expect = 6e-29
Identities = 56/59 (94%), Positives = 57/59 (96%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 54 VSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 92.7 bits (220), Expect = 9e-18
Identities = 41/87 (47%), Positives = 56/87 (64%)
Frame = +1
Query: 478 QGSGSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 657
+ +G F +IPG+ APGGH+GRF IWT+SAF +LD L+G+W+ +
Sbjct: 213 EDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAAS 272
Query: 658 QKKNFNLPQPKMANTDLTRLLKSDEIR 738
K N+NLP KM NTDL+R+LKS EI+
Sbjct: 273 LKSNYNLPMHKMINTDLSRILKSPEIQ 299
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 130 bits (315), Expect = 3e-29
Identities = 56/87 (64%), Positives = 75/87 (86%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+
Sbjct: 142 SKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRD 201
Query: 437 RRRIQRKGPLIIFNKDQGLTRAFRTSP 517
RRRI R+GPL++++KD+GL +AFR P
Sbjct: 202 RRRIARRGPLVVYDKDEGLRKAFRNIP 228
Score = 125 bits (302), Expect = 1e-27
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 57 VSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 113 bits (273), Expect = 3e-24
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = +1
Query: 487 GSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 666
G F +IPG+E APGGH+GRFVIWT+SAF RL+ LFG+WK PS KK
Sbjct: 219 GLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKK 278
Query: 667 NFNLPQPKMANTDLTRLLKSDEIR 738
+NLPQPKMANTDL+RLLKS+EIR
Sbjct: 279 GYNLPQPKMANTDLSRLLKSEEIR 302
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 127 bits (306), Expect = 3e-28
Identities = 56/59 (94%), Positives = 57/59 (96%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
VS EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 171 VSVEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 121 bits (291), Expect = 2e-26
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
VS++AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 53 VSEKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = +1
Query: 502 FPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 681
F ++PGVE APGGHLGRF+IW+ SAF LD ++G+ PS KK+F LP
Sbjct: 226 FRNLPGVETCDVYSLNLLQLAPGGHLGRFIIWSSSAFKALDNIYGTTTAPSALKKDFLLP 285
Query: 682 QPKMANTDLTRLLKSDEIR 738
++ D+ RL+ S E++
Sbjct: 286 SNVVSQADIGRLINSSELQ 304
Score = 73.7 bits (173), Expect = 4e-12
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Frame = +2
Query: 242 PSAR*ARGHIIEKIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLR 412
P+ ARGH I ++ E+PLV+ +V E I +T A L+ + A D+ KV S++LR
Sbjct: 133 PALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLR 192
Query: 413 AGKGKMRNRRRIQRKGPLIIFN---KDQGLTRAFRTSP 517
AGKGK+R RR QR+GPL++++ + L RAFR P
Sbjct: 193 AGKGKLRGRRHRQRRGPLVVYDGATDGKELVRAFRNLP 230
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 118 bits (285), Expect = 1e-25
Identities = 50/59 (84%), Positives = 53/59 (89%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 30 VPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 88
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/79 (46%), Positives = 49/79 (62%)
Frame = +1
Query: 502 FPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 681
F +IPGVE APGGHLGRF++WT SAFG LD ++GS PS KK+F LP
Sbjct: 203 FRNIPGVETSSVYSMNLLQLAPGGHLGRFIVWTSSAFGALDTIYGSTTEPSALKKDFLLP 262
Query: 682 QPKMANTDLTRLLKSDEIR 738
M DL++++ S +I+
Sbjct: 263 STMMKQPDLSKIINSSDIQ 281
Score = 80.6 bits (190), Expect = 4e-14
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
Frame = +2
Query: 242 PSAR*ARGHIIEKIPELPLVVADKV---QEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 412
P+ ARGH + +PE+PLV++ I KT AV L+ + A +D K S++LR
Sbjct: 110 PALLMARGHNVSTVPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLR 169
Query: 413 AGKGKMRNRRRIQRKGPLIIFNKDQG---LTRAFRTSP 517
AGKGK+R RR QR+GPL+I+N D+ L +AFR P
Sbjct: 170 AGKGKLRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIP 207
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 109 bits (261), Expect = 9e-23
Identities = 50/92 (54%), Positives = 69/92 (75%)
Frame = +2
Query: 242 PSAR*ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGK 421
PS ARGH +E +PE+PLVV D I KT +AV L++L A++DI KV S+ +R+GK
Sbjct: 137 PSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGK 196
Query: 422 GKMRNRRRIQRKGPLIIFNKDQGLTRAFRTSP 517
GKMRNRR +QR+GPL+++++D G+TRAFR P
Sbjct: 197 GKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIP 228
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/87 (47%), Positives = 54/87 (62%)
Frame = +1
Query: 478 QGSGSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 657
+ +G F +IPGVE APGGH+GRF+IWT+SAF +LD +FG+ + S
Sbjct: 216 EDNGVTRAFRNIPGVELCSVDRLGLLTLAPGGHVGRFIIWTKSAFEKLDSIFGTSTSKSA 275
Query: 658 QKKNFNLPQPKMANTDLTRLLKSDEIR 738
KK + P MA TDLTRL+ SDEI+
Sbjct: 276 SKKGWKPPTNIMAQTDLTRLINSDEIQ 302
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 107 bits (258), Expect = 2e-22
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +3
Query: 15 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 176
AG++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 58 AGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
ARGH I + E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRN
Sbjct: 139 ARGHRISNLKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRN 198
Query: 437 RRRIQRKGPLIIFNKDQGLTRAFRTSP 517
R+ GPLII++ D G+ +AFR P
Sbjct: 199 RKYKISNGPLIIYSXDSGIKKAFRNIP 225
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = +1
Query: 484 SGSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQK 663
SG F +IPGV+ APGG +GR IW++ AF +LD ++G K
Sbjct: 215 SGIKKAFRNIPGVDLCNVTKLNLLKLAPGGSIGRLCIWSEDAFKKLDVIYGKTFQKYVTK 274
Query: 664 KNFNLPQPKMANTDLTRLLKSDEIR 738
KN+ LP+P + N D+ R++ SD+++
Sbjct: 275 KNYILPKPIVNNADIYRIINSDQVQ 299
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 105 bits (253), Expect = 9e-22
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
VSK +G+QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 53 VSKMSGYQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWH 111
Score = 51.2 bits (117), Expect = 3e-05
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
+RGH IE + E+P+VV D +++INKTK AV L + +++ ++ K G+ R+
Sbjct: 138 SRGHRIEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKV------TGRARD 191
Query: 437 RRRIQRKGPLIIFNKD--QGLTRAFRTSP 517
R+ + GPLII +G RAFR P
Sbjct: 192 GRKKRPVGPLIILRATAVEG-KRAFRNIP 219
Score = 39.9 bits (89), Expect = 0.064
Identities = 23/59 (38%), Positives = 29/59 (49%)
Frame = +1
Query: 502 FPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNL 678
F +IPGVE AP G LGR +W++SAF LD P+K KN +L
Sbjct: 215 FRNIPGVEVACVERLNLLKLAPAGALGRLCVWSKSAFEALDDYIK--MMPTKLLKNADL 271
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 103 bits (248), Expect = 3e-21
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
VS +AGHQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 55 VSTKAGHQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFH 113
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Frame = +2
Query: 242 PSAR*ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRA 415
PS ARGH I +PELPLV+++++Q INKT AV F + K + +K + S +R
Sbjct: 135 PSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRC 194
Query: 416 GKGKMRNRRRIQRKGPLIIFNKDQGLTRAFR 508
GKGKMRNRRR+ GPL+++ +D G+ +A R
Sbjct: 195 GKGKMRNRRRVCAVGPLVVYAEDNGIVKAMR 225
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +1
Query: 508 HIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQP 687
+I GV+ APGG GR I+T+ A RL ++GS+ S K + LP+P
Sbjct: 226 NIKGVDTCSVERLNLLRLAPGGTFGRLTIFTKGAIKRLQEIYGSYTHGSSSKVGYTLPRP 285
Query: 688 KMANTDLTRLLKSDEIR 738
M N D+TR++ S E++
Sbjct: 286 AMTNADITRIINSTEVQ 302
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 102 bits (244), Expect = 1e-20
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
+S+ +G+QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 53 ISRMSGYQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWH 111
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
+RGH +E +PELPLV+ D ++ + KT+ AV L + ++ +V ++R + KGK R
Sbjct: 138 SRGHRVESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR- 195
Query: 437 RRRIQRKGPLIIFNKD--QGLTRAFRTSP 517
GPL++ +G RAFR P
Sbjct: 196 -----PVGPLVVMRSTAVEG-KRAFRNIP 218
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 502 FPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLD 624
F +IPGV+ AP G LGR VI+++SAF LD
Sbjct: 214 FRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIFSKSAFELLD 254
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 102 bits (244), Expect = 1e-20
Identities = 45/59 (76%), Positives = 47/59 (79%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
V+ +AG Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 55 VNPQAGMQHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWH 113
Score = 82.6 bits (195), Expect = 9e-15
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
ARGH I ++P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R
Sbjct: 140 ARGHRISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRG 199
Query: 437 RRRIQRKGPLII-FNKDQGLTRAFRTSP 517
++ RKGPL++ FN++ L +AFR P
Sbjct: 200 KKYRVRKGPLVVYFNENAKLLKAFRNVP 227
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +1
Query: 502 FPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 681
F ++PGVE APGG LGRFVIWTQSAF LD LFG+++ S K + L
Sbjct: 223 FRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFAHLDKLFGTYRYASVLKDGYQLL 282
Query: 682 QPKMANTDLTRLLKSDEIR 738
+P + N DL R++ S++++
Sbjct: 283 RPLLTNPDLARIINSNQVQ 301
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 100 bits (240), Expect = 3e-20
Identities = 44/59 (74%), Positives = 49/59 (83%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
V++ +G SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 53 VNRLSGMNHSAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWH 111
Score = 91.9 bits (218), Expect = 2e-17
Identities = 43/89 (48%), Positives = 63/89 (70%)
Frame = +2
Query: 242 PSAR*ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGK 421
PS +RGH I +PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+
Sbjct: 133 PSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGR 192
Query: 422 GKMRNRRRIQRKGPLIIFNKDQGLTRAFR 508
GKMRNRR + R+GP+++ ++G TRAFR
Sbjct: 193 GKMRNRRYVARRGPMLVMPNNKG-TRAFR 220
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 98.3 bits (234), Expect = 2e-19
Identities = 42/59 (71%), Positives = 46/59 (77%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
VS AG TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 49 VSSTAGMGTSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/76 (36%), Positives = 50/76 (65%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
+RG+ ++ IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRN
Sbjct: 134 SRGYRVKTIPEIPFVIEDSIEKIPKTRDLIKILTTLGI-NSIVRNKLKRKLKSGKGKMRN 192
Query: 437 RRRIQRKGPLIIFNKD 484
RR + GPL++F +
Sbjct: 193 RRFKKPTGPLLVFKNN 208
Score = 33.9 bits (74), Expect = 4.2
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 562 APGGHLGRFVIWTQSAFGRLDPL 630
APGGHLGR IW+ AF L+ +
Sbjct: 232 APGGHLGRLCIWSSKAFQMLNTI 254
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 97.5 bits (232), Expect = 3e-19
Identities = 43/58 (74%), Positives = 47/58 (81%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 176
VSK AG Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 51 VSKNAGMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/72 (50%), Positives = 48/72 (66%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
ARGH I + LP++V+D + + KTK AV LR L ++ +V KS+ +R GKGKMRN
Sbjct: 136 ARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRN 195
Query: 437 RRRIQRKGPLII 472
RR QRKG LI+
Sbjct: 196 RRYTQRKGILIV 207
Score = 56.4 bits (130), Expect = 7e-07
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = +1
Query: 502 FPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 681
F +I GV+ APGG GR +IWT+SAF +LD +FG + ++ F LP
Sbjct: 217 FRNIRGVDQMSIDSLDLLELAPGGVAGRLIIWTESAFEKLDKIFGGVEREAELTPGFKLP 276
Query: 682 QPKMANTDLTRLLKSDEIR 738
+ + DL L SD ++
Sbjct: 277 NRIVTHDDLEELFYSDAVQ 295
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 95.9 bits (228), Expect = 9e-19
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +3
Query: 15 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 58 AGHQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
Score = 95.9 bits (228), Expect = 9e-19
Identities = 47/89 (52%), Positives = 63/89 (70%)
Frame = +2
Query: 242 PSAR*ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGK 421
PS ARGH I+ +PELPLVV+D V++I KTK+AV L LKA D+ +S+R+R G
Sbjct: 134 PSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGS 193
Query: 422 GKMRNRRRIQRKGPLIIFNKDQGLTRAFR 508
GK RNRR QR+G LI+ ++++GL AFR
Sbjct: 194 GKARNRRYTQRRGVLIVHDQNEGLANAFR 222
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +1
Query: 478 QGSGSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 657
Q G + F +I GV+ APGGHLGRF+IWT+ A+ +LD L+G+ +
Sbjct: 213 QNEGLANAFRNISGVDISNVXRLNIRDLAPGGHLGRFIIWTEGAYKKLDKLYGTRFRTAL 272
Query: 658 QKKNFNLPQPKMANTDLTRLLKSDEIR 738
K + P P + NTDL+R++ S ++
Sbjct: 273 LKNEYKHPTPSVTNTDLSRIIHSPTVQ 299
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 93.1 bits (221), Expect = 6e-18
Identities = 42/68 (61%), Positives = 54/68 (79%)
Frame = +2
Query: 311 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 490
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+D G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157
Query: 491 LTRAFRTS 514
+ +A TS
Sbjct: 158 IIKASETS 165
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGG 92
VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 44 VSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +1
Query: 607 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 738
AF +LD L+G+W + K N+NLP KM NTDL+R+LK I+
Sbjct: 173 AFCKLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQ 216
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 91.1 bits (216), Expect = 3e-17
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 433
ARGH I +P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR
Sbjct: 139 ARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMR 198
Query: 434 NRRRIQRKGPLIIF-NKDQGLTRAFRTSP 517
R+ +RKGPL+++ N D +AFR P
Sbjct: 199 GRKIKERKGPLVVYGNDDLQAVKAFRNIP 227
Score = 87.0 bits (206), Expect = 4e-16
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 176
VS +AG Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 54 VSTKAGKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKW 111
Score = 63.7 bits (148), Expect = 5e-09
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +1
Query: 502 FPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 681
F +IPGV+ APG H+GRF+IWT+SAF +L+ +FG+ K ++ K F +
Sbjct: 223 FRNIPGVDTCRVENLSVLNLAPGCHIGRFIIWTESAFKKLNTIFGTQKKMAQGKSGFRIA 282
Query: 682 QPKMANTDLTRLLKSDE 732
+MA D+ R++ + E
Sbjct: 283 HAQMAVPDMKRVVVAAE 299
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/60 (65%), Positives = 51/60 (85%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +1
Query: 607 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 738
AF +LD L+G+W + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQ 138
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRN
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 437 RRRIQRKGPLIIFNKDQG-LTRAFRTSP 517
RR I RKGPLI++ + L +AFR P
Sbjct: 62 RRYISRKGPLIVYGMEGAKLVKAFRNIP 89
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +1
Query: 478 QGSGSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 657
+G+ F +IPGVE APGGHLGRFVIWT+S+F +LD ++ S++ +
Sbjct: 77 EGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTKSSFEKLDSIYRSFEKKLR 136
Query: 658 QKK 666
+++
Sbjct: 137 RRR 139
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 84.6 bits (200), Expect = 2e-15
Identities = 36/87 (41%), Positives = 58/87 (66%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
ARGH++ ++ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ KGK R
Sbjct: 136 ARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRR 195
Query: 437 RRRIQRKGPLIIFNKDQGLTRAFRTSP 517
+KGPL+I+N+D+G+ +AFR P
Sbjct: 196 AAYKTKKGPLVIYNEDKGIVKAFRNIP 222
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = +3
Query: 15 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 176
AG + SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 55 AGKKVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRW 108
Score = 54.0 bits (124), Expect = 4e-06
Identities = 29/87 (33%), Positives = 43/87 (49%)
Frame = +1
Query: 478 QGSGSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 657
+ G F +IPGVE AP +GR +WT+SAF LD ++ S
Sbjct: 210 EDKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRLTVWTESAFKALDGIYES------ 263
Query: 658 QKKNFNLPQPKMANTDLTRLLKSDEIR 738
KK F+LP+ M N D+ ++ SD ++
Sbjct: 264 -KKRFSLPRSIMTNADIEAVITSDAVQ 289
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 81.0 bits (191), Expect = 3e-14
Identities = 32/86 (37%), Positives = 57/86 (66%)
Frame = +2
Query: 260 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 439
RGH+I+ +P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGKGK R R
Sbjct: 134 RGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGR 193
Query: 440 RRIQRKGPLIIFNKDQGLTRAFRTSP 517
R ++ K LI+ ++D+G+ R P
Sbjct: 194 RYVKPKSVLIVVDEDEGIKLGARNHP 219
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 15 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRW 176
AG +TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 52 AGFRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDW 105
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 77.4 bits (182), Expect = 3e-13
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = +3
Query: 15 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +1
Query: 502 FPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 681
F ++PGVE APGG LGRFVIWTQSAF LD LFG+++ S K + L
Sbjct: 69 FRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFANLDKLFGTYRYSSILKDGYQLL 128
Query: 682 QPKMANTDLTRLLKSDEIR 738
+P + N DL R++ S++++
Sbjct: 129 RPLLTNPDLARIINSNQVQ 147
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +2
Query: 302 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FN 478
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGPL++ FN
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60
Query: 479 KDQGLTRAFRTSP 517
++ L +AFR P
Sbjct: 61 ENAKLLKAFRNVP 73
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 77.0 bits (181), Expect = 5e-13
Identities = 38/87 (43%), Positives = 54/87 (62%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
ARGH I +P +PLVV + KTK A+ ++ + D+ + S+ +RAG+GKMRN
Sbjct: 129 ARGHRIADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRN 186
Query: 437 RRRIQRKGPLIIFNKDQGLTRAFRTSP 517
RR I RKGPL+I+N + + R FR P
Sbjct: 187 RRYITRKGPLVIYNTED-VARGFRNLP 212
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/58 (53%), Positives = 35/58 (60%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 176
VS+ AG Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 50 VSRYAGVQCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRW 101
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/79 (34%), Positives = 45/79 (56%)
Frame = +1
Query: 502 FPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 681
F ++PGV+ APG H GR ++WT+SAF LD ++ + K+N+ LP
Sbjct: 208 FRNLPGVDLCHVSSIRLLELAPGSHPGRLILWTKSAFASLDDVYAA-------KQNYTLP 260
Query: 682 QPKMANTDLTRLLKSDEIR 738
+ + TD+ R+L+SD ++
Sbjct: 261 RSCITQTDIERILQSDAVQ 279
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
ARGH++EK+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR
Sbjct: 156 ARGHVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRG 215
Query: 437 RRRIQRKGPLIIFNK-DQGLTRAFRTSP 517
RR + K L++ + + L A R P
Sbjct: 216 RRYKEPKSVLVVVSDLNAPLIAAVRNFP 243
Score = 40.7 bits (91), Expect = 0.037
Identities = 24/59 (40%), Positives = 31/59 (52%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
V + AG + S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 74 VYEGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLH 129
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/86 (41%), Positives = 53/86 (61%)
Frame = +2
Query: 260 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 439
RGH ++ +LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+GKMR R
Sbjct: 131 RGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGR 190
Query: 440 RRIQRKGPLIIFNKDQGLTRAFRTSP 517
R Q K LI+ + +AFR+ P
Sbjct: 191 RYKQPKSVLIVARNSSAM-KAFRSLP 215
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/86 (33%), Positives = 53/86 (61%)
Frame = +2
Query: 260 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 439
R H+ E ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR R
Sbjct: 129 RSHVFEG--ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGR 186
Query: 440 RRIQRKGPLIIFNKDQGLTRAFRTSP 517
R +++K L++ KD G+ +A + P
Sbjct: 187 RYVKKKSVLLVVGKDDGVVKAAKNLP 212
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 15 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 176
+G S E+WG G AR+PR + G + GGR P KP R+W
Sbjct: 52 SGVDYSWENWGPGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKW 100
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 65.3 bits (152), Expect = 1e-09
Identities = 25/83 (30%), Positives = 51/83 (61%)
Frame = +2
Query: 260 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 439
RGH + ++ ++P V+ D+++ + TK+ + L DI++ K +++++GKGK+R R
Sbjct: 130 RGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGR 189
Query: 440 RRIQRKGPLIIFNKDQGLTRAFR 508
+ KGPL++ D+G++ R
Sbjct: 190 KYRTPKGPLVVVGNDRGISLGAR 212
Score = 38.7 bits (86), Expect = 0.15
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 15 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 161
AG +T+AES+G+GR A +PRV+G S + AF GGR P +
Sbjct: 53 AGKRTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
ARGHII+K +P+VV D ++++ KTK+ L +L ++ +VY+ +R RAGKGK R
Sbjct: 143 ARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRG 198
Query: 437 RRRIQRKGPLIIFN 478
R I+RKGPLI+ N
Sbjct: 199 RAYIERKGPLIVVN 212
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
ARGH+ + P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR
Sbjct: 135 ARGHVFKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRG 194
Query: 437 RRRIQRKGPLII 472
R+ + GPLII
Sbjct: 195 RKYKEPIGPLII 206
Score = 35.5 bits (78), Expect = 1.4
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +3
Query: 15 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 155
AG +TSAES+G +AR+PRV+ SG+ A GGR+ P
Sbjct: 59 AGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFP 100
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +2
Query: 38 IMGYRTCCCPNSACPWWWYP*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 193
++G+R C SA W VR C+R HV WW +VR E L LAP QP
Sbjct: 117 LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +3
Query: 15 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 161
AG +TSA S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 65 AGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
Score = 39.5 bits (88), Expect = 0.085
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 260 RGHIIEKIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
RGH LP+V+ V +I+ ++A L + + D+L+ + +R AGKGKMR
Sbjct: 142 RGHRFSA-ETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRG 200
Query: 437 RRRIQRKGPLII 472
RR K L +
Sbjct: 201 RRYKVPKSVLFV 212
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.9 bits (94), Expect = 0.016
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 388
ARGH IE + ELPLV+ D + ++KT + L+++ A D+ K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.26
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2
Query: 157 VGANIRPPRHMLPKAP*P 104
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 37.5 bits (83), Expect = 0.34
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 15 AGHQTSAESWG--TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 161
AG SA+S TG ARI R++GGG R G+ RGGR P K
Sbjct: 52 AGMDVSADSLNPPTGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 37.1 bits (82), Expect = 0.45
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 472 LQQGSGSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLD 624
+ Q +G +IPGV+ APGG GR +WT++A G L+
Sbjct: 254 VSQTNGLAKAARNIPGVDIVVAKDLSAEDLAPGGDAGRLTVWTKAAIGALE 304
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 36.7 bits (81), Expect = 0.60
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1
Query: 248 RWDASSSNGCCQGRSPLSEVDATVPAPPGL 159
+W S+G C G SPLS A PAPPGL
Sbjct: 110 KWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 120 RRHPDRTYGYHHHGHAEFGQQHVR-YP 43
R PD +G+HHHGH G HV YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 63 ARIPRVRGGGTHRSGQGAFGNMCRGG 140
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 34.7 bits (76), Expect = 2.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 135 HDTCYRRHPDRTYGYHHHGHAEFG 64
HD C+ H + +G+HHH HA G
Sbjct: 109 HDHCHEHHHEHEHGHHHHHHASPG 132
>UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase family
protein; n=1; Trichomonas vaginalis G3|Rep:
Phosphatidylinositol 3-and 4-kinase family protein -
Trichomonas vaginalis G3
Length = 2286
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -2
Query: 496 SQTLILVEDYEGSLTLDTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQE-DDSLFGLVDL 320
SQ LI+ +Y L ++ F TS+ + V LK + C Q+ + S++ ++DL
Sbjct: 1065 SQKLIIDSEYLRGKILPIAFLSCFLNTSSDQ-KEVFLKQLNDCFSLGQKINSSIYKIIDL 1123
Query: 319 LDFVGYN 299
L+ +GYN
Sbjct: 1124 LEMLGYN 1130
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 34.3 bits (75), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 147 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIR 34
+Y H + RH R+YG+ HH H + R P +R
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVR 127
>UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr protein;
n=1; Bos taurus|Rep: PREDICTED: similar to Hrnr protein
- Bos taurus
Length = 1606
Score = 33.9 bits (74), Expect = 4.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 590 SSGLSPHSAGLTPYSGHGRHHQNKRRTSTCPNRR 691
SSG H +GL+ S +G+H R++S+C +R
Sbjct: 566 SSGFGQHGSGLSQSSSYGQHGSTSRQSSSCGQQR 599
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 33.9 bits (74), Expect = 4.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 135 HDTCYRRHPDRTYGYHHHGHAEFGQQH 55
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 33 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 143
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 5.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 136 PRHMLPKAP*PDLWVPPPR 80
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 33.1 bits (72), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 138 HHDTCYRRHPDRTYGYHHHGHAEFGQQ 58
HH + RH DR +G HHHG G +
Sbjct: 132 HHTRHHTRHHDRHHGRHHHGRHHHGHR 158
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.1 bits (72), Expect = 7.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 147 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQP 13
TY+ H Y +HP T+ YHH H + ++ ++P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
>UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor;
n=19; Eutheria|Rep: Histidine-rich glycoprotein
precursor - Homo sapiens (Human)
Length = 525
Score = 33.1 bits (72), Expect = 7.4
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -3
Query: 135 HDTCYRRHPD--RTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 7
HDT +R+HP +G+H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 32.7 bits (71), Expect = 9.7
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 144 YVHHD-TCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 31
Y H+D Y +H D + HHHG +G H + H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_Q05TV6 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. RS9916|Rep: Putative uncharacterized
protein - Synechococcus sp. RS9916
Length = 143
Score = 32.7 bits (71), Expect = 9.7
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 11 GGWSPNQCRIMG--YRTCCCPNSACPWWWY 94
GGW P CR Y + C PWWW+
Sbjct: 54 GGWVPAYCRDQPDQYSSGSCYGGGVPWWWW 83
>UniRef50_Q9XZR7 Cluster: Protease, reverse transcriptase,
ribonuclease H, integrase precursor; n=4;
Endopterygota|Rep: Protease, reverse transcriptase,
ribonuclease H, integrase precursor - Drosophila buzzatii
(Fruit fly)
Length = 1147
Score = 32.7 bits (71), Expect = 9.7
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Frame = +2
Query: 227 CCYWRPSAR*ARGHIIEKIPELP--LVVADKVQEINKTKQA----VIFLRRLKAWSDILK 388
C ++PS A G ++ ++PE P V AD V + ++K ++F+ R W++++
Sbjct: 832 CQRYKPSQLQAAGQMLTQVPEEPWATVCADFVGPLPRSKHGNTMLLVFIDRFSKWTEMVP 891
Query: 389 VYKSQRLRAGKGKMRNRRRIQRKGP--LIIFNKDQGLTRAFR 508
+ +S A + R R + P LI N Q +RAF+
Sbjct: 892 L-RSANTAALQKAFRERILARFGAPKVLITDNGTQFTSRAFK 932
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,681,860
Number of Sequences: 1657284
Number of extensions: 15243616
Number of successful extensions: 52289
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 48079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51907
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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