Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_C14
(586 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O43809 Cluster: Cleavage and polyadenylation specificit... 227 1e-58
UniRef50_Q259F9 Cluster: H0124B04.17 protein; n=14; Eukaryota|Re... 142 5e-33
UniRef50_Q4WE76 Cluster: Cleavage and polyadenylation specific f... 139 4e-32
UniRef50_O65606 Cluster: Putative uncharacterized protein M7J2.8... 134 1e-30
UniRef50_Q4PBX0 Cluster: Putative uncharacterized protein; n=2; ... 128 1e-28
UniRef50_Q6C1Q0 Cluster: Similar to wi|NCU09014.1 Neurospora cra... 119 4e-26
UniRef50_A7PE32 Cluster: Chromosome chr11 scaffold_13, whole gen... 115 9e-25
UniRef50_Q94AF0 Cluster: AT4g29820/F27B13_60; n=3; Magnoliophyta... 108 1e-22
UniRef50_Q012R9 Cluster: MRNA cleavage factor I subunit; n=2; Os... 102 7e-21
UniRef50_A2DA19 Cluster: Hydrolase, NUDIX family protein; n=1; T... 71 2e-11
UniRef50_Q5KEC3 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q7YZC1 Cluster: Pre-mRNA cleavage factor I 25 kDa subun... 50 5e-05
UniRef50_Q9SZQ4 Cluster: MRNA cleavage factor subunit-like prote... 48 1e-04
UniRef50_Q3LVX2 Cluster: Pre-mRNA cleavage factor I; n=1; Bigelo... 45 0.001
UniRef50_Q5CWT4 Cluster: NUDIX domain protein; mRNA cleavage fac... 43 0.006
UniRef50_A5K9S5 Cluster: mRNA cleavage factor-like protein, puta... 41 0.025
UniRef50_Q6BCA7 Cluster: Cleavage factor I 25 kDa; n=5; Trypanos... 38 0.13
UniRef50_A4HEN7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.93
UniRef50_A6VQQ8 Cluster: TRAP transporter, 4TM/12TM fusion prote... 35 1.2
UniRef50_A0SEL1 Cluster: 126 kDa replicase; n=1; Maracuja mosaic... 35 1.6
UniRef50_Q9FCX1 Cluster: YcfB protein; n=1; Erwinia amylovora|Re... 35 1.6
UniRef50_Q0E8B7 Cluster: CG41452-PA; n=2; Drosophila melanogaste... 34 2.8
UniRef50_Q4N1V1 Cluster: MRNA cleavage factor protein, putative;... 33 3.8
UniRef50_Q9A517 Cluster: MutT/nudix family protein; n=1; Cauloba... 33 5.0
UniRef50_A1K3E0 Cluster: Bifunctional DGTP-pyrophosphohydrolase/... 33 5.0
UniRef50_A0NFE5 Cluster: ENSANGP00000023517; n=1; Anopheles gamb... 33 5.0
UniRef50_A6V1V6 Cluster: Hydrolase, nudix family protein; n=7; P... 33 6.6
UniRef50_UPI0000DB7D7E Cluster: PREDICTED: similar to CG8128-PA,... 32 8.7
UniRef50_Q4TFR5 Cluster: Chromosome undetermined SCAF4259, whole... 32 8.7
UniRef50_Q9A8K7 Cluster: MutT/nudix family protein; n=2; Cauloba... 32 8.7
UniRef50_A4J7A4 Cluster: NUDIX hydrolase; n=1; Desulfotomaculum ... 32 8.7
UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1; Schizosa... 32 8.7
>UniRef50_O43809 Cluster: Cleavage and polyadenylation specificity
factor subunit 5; n=34; Bilateria|Rep: Cleavage and
polyadenylation specificity factor subunit 5 - Homo
sapiens (Human)
Length = 227
Score = 227 bits (556), Expect = 1e-58
Identities = 102/124 (82%), Positives = 113/124 (91%)
Frame = +3
Query: 174 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 353
LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 354 LPHVLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLXRQDGVKQEWLIEDTIXNWWR 533
LPHVLLLQLGT FFKLPGGELNPGED ++GLKRL+TE L RQDGV Q+W+I+D I NWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 534 PNFE 545
PNFE
Sbjct: 151 PNFE 154
>UniRef50_Q259F9 Cluster: H0124B04.17 protein; n=14; Eukaryota|Rep:
H0124B04.17 protein - Oryza sativa (Rice)
Length = 2505
Score = 142 bits (344), Expect = 5e-33
Identities = 65/119 (54%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Frame = +3
Query: 192 INLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLL 371
+N+YPL NYTFGTKEP EKD SV R RM+ + K GMR SVE +LLV EH PH+LL
Sbjct: 9 VNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 68
Query: 372 LQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLX-RQDGVKQEWLIEDTIXNWWRPNFE 545
LQ+G F KLPGG L PGE+ I+GLKR L L W + + + WWRPNFE
Sbjct: 69 LQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFE 127
>UniRef50_Q4WE76 Cluster: Cleavage and polyadenylation specific
factor 5; n=19; Eukaryota|Rep: Cleavage and
polyadenylation specific factor 5 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 334
Score = 139 bits (337), Expect = 4e-32
Identities = 66/126 (52%), Positives = 86/126 (68%), Gaps = 6/126 (4%)
Frame = +3
Query: 186 RSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHV 365
++I LYPL+NYTFGTKE E+D SV AR +R+ E + K GMRR+ EGVL+ HEH PHV
Sbjct: 83 KTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGVLVCHEHNHPHV 142
Query: 366 LLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLX------RQDGVKQEWLIEDTIXNW 527
L+LQ+ AFFKLPG L+ +D ++G K+ L E L +GV ++W I DT+ W
Sbjct: 143 LMLQIANAFFKLPGDYLHFDDDEVEGFKKRLNERLAPVGSQFSGEGVNEDWEIGDTLAQW 202
Query: 528 WRPNFE 545
WRPNFE
Sbjct: 203 WRPNFE 208
>UniRef50_O65606 Cluster: Putative uncharacterized protein M7J2.80;
n=3; core eudicotyledons|Rep: Putative uncharacterized
protein M7J2.80 - Arabidopsis thaliana (Mouse-ear cress)
Length = 210
Score = 134 bits (324), Expect = 1e-30
Identities = 67/140 (47%), Positives = 85/140 (60%), Gaps = 16/140 (11%)
Frame = +3
Query: 174 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 353
+ +++ +N YPL+NY+FGTKEP EKD SV R RM+ + K GMR SVEG+LLV EH
Sbjct: 1 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHN 60
Query: 354 LPHVLLLQLGTAFFKLPGGELNPGEDXI---------------DGLKRLLTETL-XRQDG 485
PH+LLLQ+G F KLPGG L PGE+ I DGLKR LT L
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENGIQLPPFWVYYVVSAEADGLKRKLTSKLGGNSAA 120
Query: 486 VKQEWLIEDTIXNWWRPNFE 545
+ +W + + + WWRPNFE
Sbjct: 121 LVPDWTVGECVATWWRPNFE 140
>UniRef50_Q4PBX0 Cluster: Putative uncharacterized protein; n=2;
Ustilago|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 258
Score = 128 bits (309), Expect = 1e-28
Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 14/136 (10%)
Frame = +3
Query: 180 LNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLP 359
+++++ LYP+T +TF TK+ E+D SV AR QR++ + +GMRR+VE VL+VHEHG P
Sbjct: 1 MSQTLTLYPVTAFTFTTKDAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHP 60
Query: 360 HVLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLX-----------RQDGVKQ---E 497
HVL+LQ+ AFFKLPG L PGED ++G+K L E L +G + +
Sbjct: 61 HVLMLQIANAFFKLPGDYLKPGEDEVEGIKARLDERLGPVESDPNSFGPNGEGRNKDDGD 120
Query: 498 WLIEDTIXNWWRPNFE 545
W I+D + WWRPNFE
Sbjct: 121 WEIQDCLAQWWRPNFE 136
>UniRef50_Q6C1Q0 Cluster: Similar to wi|NCU09014.1 Neurospora crassa
NCU09014. 1 hypothetical protein; n=1; Yarrowia
lipolytica|Rep: Similar to wi|NCU09014.1 Neurospora
crassa NCU09014. 1 hypothetical protein - Yarrowia
lipolytica (Candida lipolytica)
Length = 262
Score = 119 bits (287), Expect = 4e-26
Identities = 61/125 (48%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Frame = +3
Query: 186 RSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHV 365
++I LYP +NY F TK+ E+D SV AR QR++ + + GM R VEGV L HE G P+V
Sbjct: 26 QTIRLYPSSNYVFATKDAQVERDVSVQARMQRLKSMYDESGMLRYVEGVFLCHEFGTPYV 85
Query: 366 LLLQLGTAFFKLPGGELNPG-EDXIDGLKRLLTETLXRQDGVKQE----WLIEDTIXNWW 530
LLQL FFKLPG L+P ED GL R L + L ++G QE W + D + WW
Sbjct: 86 FLLQLPNNFFKLPGEYLDPDEEDEEGGLLRKLADRLSPENGEDQENSKSWKVLDCLAQWW 145
Query: 531 RPNFE 545
RPNFE
Sbjct: 146 RPNFE 150
>UniRef50_A7PE32 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 291
Score = 115 bits (276), Expect = 9e-25
Identities = 53/122 (43%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Frame = +3
Query: 183 NRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPH 362
N +++YPL+ Y FG+K+PL K+ ++ R RM+ + + G R V V+LV PH
Sbjct: 95 NHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPH 154
Query: 363 VLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLX-RQDGVKQEWLIEDTIXNWWRPN 539
+LLLQ+ +FFKLPGG L PGE I+GLKR L+ L +DG +W + + + WWRP+
Sbjct: 155 LLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPD 214
Query: 540 FE 545
FE
Sbjct: 215 FE 216
>UniRef50_Q94AF0 Cluster: AT4g29820/F27B13_60; n=3;
Magnoliophyta|Rep: AT4g29820/F27B13_60 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 222
Score = 108 bits (259), Expect = 1e-22
Identities = 55/119 (46%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = +3
Query: 192 INLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLL 371
++LYPL++Y FG+KE L KD + R R++ + G+R VE VLLV PHVLL
Sbjct: 29 VDLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFKHPHVLL 88
Query: 372 LQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLXRQDGV-KQEWLIEDTIXNWWRPNFE 545
LQ + FKLPGG L PGE I+GLKR L L + V + + + I WWRPNFE
Sbjct: 89 LQYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSVNENVGVSGYEVGECIGMWWRPNFE 147
>UniRef50_Q012R9 Cluster: MRNA cleavage factor I subunit; n=2;
Ostreococcus|Rep: MRNA cleavage factor I subunit -
Ostreococcus tauri
Length = 279
Score = 102 bits (244), Expect = 7e-21
Identities = 52/123 (42%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Frame = +3
Query: 186 RSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHV 365
R ++++ L NYTFGTK EKD+S AR RM+ ++ + G RRSV + +V +H PH+
Sbjct: 84 RVVDVHALGNYTFGTKRARGEKDSSAAARLLRMKTQYEREGKRRSVGAICMVSQHRTPHI 143
Query: 366 LLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETL--XRQDGV-KQEWLIEDTIXNWWRP 536
LLLQ+ FKLPGG L GE +GL R + L R+DG+ E+ + D + W+R
Sbjct: 144 LLLQITPTTFKLPGGRLRAGEGEREGLARKMQNKLQPEREDGLGAYEFDVGDQVATWYRT 203
Query: 537 NFE 545
+FE
Sbjct: 204 SFE 206
>UniRef50_A2DA19 Cluster: Hydrolase, NUDIX family protein; n=1;
Trichomonas vaginalis G3|Rep: Hydrolase, NUDIX family
protein - Trichomonas vaginalis G3
Length = 191
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +3
Query: 189 SINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVL 368
S+ ++ L+NY FG E E++ + R ++++E F G +SV ++L HEH + +L
Sbjct: 2 SLRIHKLSNYRFGASEDEEEEEKAHTDRMEKIKEIFAVEGTVKSVRCIILAHEHNITTIL 61
Query: 369 LLQ-LGTAFFKLPGGELNPGEDXIDGLKRLLTETLXRQDGVKQEWLIEDTIXNWWRPNF 542
LL+ ++PGG + GE+ +KR+LT+ +G E+ I D + W+RP F
Sbjct: 62 LLKNKNKKKLQMPGGIVRTGEEDEAAIKRILTKKFRIVEG---EFDIGDHVATWYRPQF 117
>UniRef50_Q5KEC3 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 229
Score = 70.5 bits (165), Expect = 3e-11
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 36/155 (23%)
Frame = +3
Query: 189 SINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLV--------- 341
+I +PL NY F +E E+D SV R +R+ +++ + G RRSVE +++V
Sbjct: 8 TIEAFPLRNYLFIEREGQPEEDNSVTNRLKRLEDQYKESGTRRSVEAIMVVTVGNSISPS 67
Query: 342 --------HEHGLPHVLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLX-------- 473
HG HVL+LQ+ AF+KLPGG L+P E +GL L E L
Sbjct: 68 RALLNLPVQVHGFAHVLVLQVANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPVTTLKG 127
Query: 474 -RQDGVKQ----------EWLIEDTIXNWWRPNFE 545
+D + + +W + D + W+RP+F+
Sbjct: 128 KDEDDLPRTVWLAPEGGRDWEVRDCLSVWYRPHFD 162
>UniRef50_Q7YZC1 Cluster: Pre-mRNA cleavage factor I 25 kDa subunit;
n=3; Entamoeba histolytica|Rep: Pre-mRNA cleavage factor
I 25 kDa subunit - Entamoeba histolytica
Length = 236
Score = 49.6 bits (113), Expect = 5e-05
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Frame = +3
Query: 192 INLYPLTNYTFGTKEPLFE-KDASVPARFQRMREEFCKIGM-RRSVEGVLLVHEHGLPHV 365
+ +YP+ NY KE L + K + + +++ K + R SV GV+LVH++ PH+
Sbjct: 40 LKIYPIENYQIDKKEKLDKLKHQTFGYQMDQLKISVEKNHVPRTSVYGVILVHKNNFPHL 99
Query: 366 LLLQLGTAF-----FKLPGGELNPGEDX-IDGLKRLLTETLXRQ 479
L+LQ + L GG L GED ++GLKR L + + +
Sbjct: 100 LVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKLRKKMSME 143
>UniRef50_Q9SZQ4 Cluster: MRNA cleavage factor subunit-like protein;
n=1; Arabidopsis thaliana|Rep: MRNA cleavage factor
subunit-like protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 185
Score = 48.4 bits (110), Expect = 1e-04
Identities = 42/118 (35%), Positives = 55/118 (46%)
Frame = +3
Query: 192 INLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLL 371
++LYPL++Y FG+KE L R+++E ++ H PHVLL
Sbjct: 29 VDLYPLSSYYFGSKEAL------------RVKDE-------------IISDRH--PHVLL 61
Query: 372 LQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLXRQDGVKQEWLIEDTIXNWWRPNFE 545
LQ + FKLPGG L PGE GL +L V + I WWRPNFE
Sbjct: 62 LQYRNSIFKLPGGRLRPGE---SGLVCCFLASLCINIAV------GECIGMWWRPNFE 110
>UniRef50_Q3LVX2 Cluster: Pre-mRNA cleavage factor I; n=1;
Bigelowiella natans|Rep: Pre-mRNA cleavage factor I -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 202
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +3
Query: 201 YPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQ 377
YP+ NY F T + + KD + + QR++ +F K G S + +++V +H P+VLL +
Sbjct: 5 YPIENYKFYTSKAVKRKDRKMRHKLQRLKYKFLKFGSFASRKSIVIVTKHKHPYVLLFR 63
>UniRef50_Q5CWT4 Cluster: NUDIX domain protein; mRNA cleavage
factor-like protein Im like, plant+animal group; n=3;
Cryptosporidium|Rep: NUDIX domain protein; mRNA cleavage
factor-like protein Im like, plant+animal group -
Cryptosporidium parvum Iowa II
Length = 277
Score = 42.7 bits (96), Expect = 0.006
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 156 QNPSMNLTLNRSINLYPLTNYTFGTKEPLFEKDASVPAR----FQRMREEFCKIGMRRSV 323
Q+ + N+ S +YPL NY ++ E +S+P F + F K G+ RSV
Sbjct: 39 QSMATNVDHEPSWLIYPLKNYGIRVQDNSDEIQSSIPINEMNGFNVKVDNFLKDGIGRSV 98
Query: 324 EGVLLVHEHGLPHVLLLQ 377
++L H + PHV+LLQ
Sbjct: 99 AALMLTHRYLCPHVVLLQ 116
>UniRef50_A5K9S5 Cluster: mRNA cleavage factor-like protein,
putative; n=12; root|Rep: mRNA cleavage factor-like
protein, putative - Plasmodium vivax
Length = 267
Score = 40.7 bits (91), Expect = 0.025
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 198 LYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQ 377
+YP NY F E L K + ++ + + G+R S ++L H + PH+LLLQ
Sbjct: 59 VYPQANYEFNIDEKLKSKFVMDADKCKKRINTYNQNGIRSSALAIILCHRYEYPHLLLLQ 118
Query: 378 -LGTAFFKLPGGELNPGEDXIDGLKRLL 458
+ + + L G+ E D LK+ L
Sbjct: 119 NVESQTYYLLSGKYRSWEKPRDVLKKKL 146
>UniRef50_Q6BCA7 Cluster: Cleavage factor I 25 kDa; n=5;
Trypanosomatidae|Rep: Cleavage factor I 25 kDa -
Trypanosoma cruzi
Length = 292
Score = 38.3 bits (85), Expect = 0.13
Identities = 28/49 (57%), Positives = 30/49 (61%)
Frame = +3
Query: 231 KEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQ 377
K PL EK S+ AR REE C SVEGVLLVH H PHVLLL+
Sbjct: 72 KTPL-EKLMSLKAR---CREEQCV----HSVEGVLLVHVHDHPHVLLLR 112
>UniRef50_A4HEN7 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 271
Score = 35.5 bits (78), Expect = 0.93
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +3
Query: 276 QRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQ 377
+R EE C SVEGVLLVH H PHVLL++
Sbjct: 58 KRCEEELCV----HSVEGVLLVHLHRHPHVLLMK 87
>UniRef50_A6VQQ8 Cluster: TRAP transporter, 4TM/12TM fusion protein
precursor; n=1; Actinobacillus succinogenes 130Z|Rep:
TRAP transporter, 4TM/12TM fusion protein precursor -
Actinobacillus succinogenes 130Z
Length = 628
Score = 35.1 bits (77), Expect = 1.2
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 346 SCTNNTPSTDLL-IPILQNSSRILWNLAGTDASFSNSGSLVPNV*FVSGYKLIDLLRVKF 170
S NT ST +L IPI++ S A T+A S G L+P + ++ + + D+L V +
Sbjct: 231 SAVANTTSTGVLTIPIMKRSGYTTEQAAATEAIASTGGQLMPPIMGIAAFVMADMLGVPY 290
>UniRef50_A0SEL1 Cluster: 126 kDa replicase; n=1; Maracuja mosaic
virus|Rep: 126 kDa replicase - Maracuja mosaic virus
Length = 1103
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 545 FEIRSPPVPYCVFNEPFLFDT-VLSA*SLCEKPLQTINXILSRVQFST 405
F++R+PP+P C F+ P DT +S SL + P+ + L R + T
Sbjct: 189 FQLRAPPIPQCPFSPPEQMDTFAVSVHSLYDIPVNELGPALLRKKVKT 236
>UniRef50_Q9FCX1 Cluster: YcfB protein; n=1; Erwinia amylovora|Rep:
YcfB protein - Erwinia amylovora (Fire blight bacteria)
Length = 132
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3
Query: 333 LLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLXRQ 479
+++H+ L +L + GTA F PGG+ GED + LKR L E L Q
Sbjct: 10 IIIHQRSL--LLTRKRGTAIFISPGGKPLAGEDHLSCLKRELDEELGVQ 56
>UniRef50_Q0E8B7 Cluster: CG41452-PA; n=2; Drosophila
melanogaster|Rep: CG41452-PA - Drosophila melanogaster
(Fruit fly)
Length = 399
Score = 33.9 bits (74), Expect = 2.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 102 PPGNKQWPARPGLQHQISQNPSMNLTLNR 188
P +WP RPG+ +S N NLT+NR
Sbjct: 38 PKSPPRWPIRPGVMLHVSSNTKENLTVNR 66
>UniRef50_Q4N1V1 Cluster: MRNA cleavage factor protein, putative;
n=2; Theileria|Rep: MRNA cleavage factor protein,
putative - Theileria parva
Length = 226
Score = 33.5 bits (73), Expect = 3.8
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Frame = +3
Query: 306 GMRRSVEGVLLVHEHGLPHVLLLQLG-TAFFKLPGGEL----NPGEDXIDGLKRLLTETL 470
GMR +V GV+L H G P VLLL+ L GG+ NP E L R +T T
Sbjct: 64 GMRITVCGVILSHRKGFPFVLLLKRDLDKSVGLLGGKCKSFENPKEVLSSKLARFITSTK 123
Query: 471 XR-QDGVKQ--EWL-IEDTIXNWWRPNF 542
+ Q +K+ E + + + + ++WR +F
Sbjct: 124 HKHQLNIKETIETIQVGELLADFWRCDF 151
>UniRef50_Q9A517 Cluster: MutT/nudix family protein; n=1;
Caulobacter vibrioides|Rep: MutT/nudix family protein -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 238
Score = 33.1 bits (72), Expect = 5.0
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 300 KIGMRRSVEGVLLVHEHGLPHVL---LLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETL 470
K+G + G++ +H+ G ++ L ++LP G GED +DG KR L E +
Sbjct: 84 KVGFKNQAIGIVPLHDDGTVTLVGQNRFSLANYSWELPEGGAPHGEDPLDGAKRELAEEV 143
Query: 471 XRQ 479
Q
Sbjct: 144 GLQ 146
>UniRef50_A1K3E0 Cluster: Bifunctional
DGTP-pyrophosphohydrolase/Thiamine-phosphate
diphosphorylase; n=5; Betaproteobacteria|Rep:
Bifunctional
DGTP-pyrophosphohydrolase/Thiamine-phosphate
diphosphorylase - Azoarcus sp. (strain BH72)
Length = 318
Score = 33.1 bits (72), Expect = 5.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 390 FFKLPGGELNPGEDXIDGLKRLLTETL 470
+++ PGG++ PGE D LKR L E L
Sbjct: 37 YWEFPGGKVEPGESAADALKRELAEEL 63
>UniRef50_A0NFE5 Cluster: ENSANGP00000023517; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000023517 - Anopheles gambiae
str. PEST
Length = 430
Score = 33.1 bits (72), Expect = 5.0
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 90 AVQGPPGNKQWPARPGLQH----QISQNPSMNLTLNRSINLYPLTNYTFGTKEPLFEKDA 257
AV+G G ++ PARP L+H Q+S ++R+++ P T T P +
Sbjct: 5 AVRGRTGRRELPARPQLRHPVHAQLSAGVLPAAAVHRAVSAAPHTERTARASSPCTTIRS 64
Query: 258 SVPAR 272
++PAR
Sbjct: 65 ALPAR 69
>UniRef50_A6V1V6 Cluster: Hydrolase, nudix family protein; n=7;
Pseudomonas|Rep: Hydrolase, nudix family protein -
Pseudomonas aeruginosa PA7
Length = 152
Score = 32.7 bits (71), Expect = 6.6
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 363 VLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETL 470
+L+ + GT F LPGG+ PGE + L+R L E L
Sbjct: 21 LLVRKRGTQAFMLPGGKREPGETPLAALQRELLEEL 56
>UniRef50_UPI0000DB7D7E Cluster: PREDICTED: similar to CG8128-PA,
partial; n=1; Apis mellifera|Rep: PREDICTED: similar to
CG8128-PA, partial - Apis mellifera
Length = 222
Score = 32.3 bits (70), Expect = 8.7
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 387 AFFKLPGGELNPGEDXIDGLKR-LLTET 467
A +KLPGG +NPGE+ + +KR +L ET
Sbjct: 126 AMWKLPGGYVNPGENLEEAVKREILEET 153
>UniRef50_Q4TFR5 Cluster: Chromosome undetermined SCAF4259, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF4259,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 130
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1
Query: 145 CCSPGRAGHCLLPGGP*TAAILYLILFLTKPRMQ 44
CCSPGR GH + G P L+ FLT P Q
Sbjct: 80 CCSPGRHGHRVQQGAP--PGTSQLLPFLTHPERQ 111
>UniRef50_Q9A8K7 Cluster: MutT/nudix family protein; n=2;
Caulobacter|Rep: MutT/nudix family protein - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 131
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 363 VLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETL 470
+L+ + GTA F PGG+ + GED + L R L E L
Sbjct: 20 LLVRKRGTAIFMKPGGKRDAGEDDLTTLARELREEL 55
>UniRef50_A4J7A4 Cluster: NUDIX hydrolase; n=1; Desulfotomaculum
reducens MI-1|Rep: NUDIX hydrolase - Desulfotomaculum
reducens MI-1
Length = 129
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 393 FKLPGGELNPGEDXIDGLKRLLTETL 470
++ PGG+LN GED DGL+R + E L
Sbjct: 32 WEFPGGKLNYGEDPKDGLRREIIEEL 57
>UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein rsd1
- Schizosaccharomyces pombe (Fission yeast)
Length = 604
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 299 TKLLSHPLEPRRDRCVLLEQRLLSSERVIRKWIQ 198
+KL+S P P R RC LLE +E W+Q
Sbjct: 494 SKLVSEPEPPIRSRCALLENMFNPAEETSPNWVQ 527
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,059,044
Number of Sequences: 1657284
Number of extensions: 10915391
Number of successful extensions: 31488
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 30062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31468
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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