Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_A22
(459 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 232 3e-60
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 204 7e-52
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 190 2e-47
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 182 2e-45
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 165 5e-40
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 122 5e-27
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 118 8e-26
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 109 2e-23
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 104 1e-21
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 103 1e-21
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 101 6e-21
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 101 7e-21
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 100 2e-20
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 100 3e-20
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 99 5e-20
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 97 1e-19
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 97 2e-19
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 97 2e-19
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 95 9e-19
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 93 2e-18
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 85 9e-16
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 73 2e-12
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 65 8e-10
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 64 1e-09
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 63 3e-09
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 60 2e-08
UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125; Bacter... 56 3e-07
UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22; Bacteri... 53 3e-06
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 52 8e-06
UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia... 51 1e-05
UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77; Bacteri... 51 1e-05
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 50 2e-05
UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n... 50 2e-05
UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellul... 49 6e-05
UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n... 49 6e-05
UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast p... 48 7e-05
UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidat... 48 1e-04
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 48 1e-04
UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n... 44 0.001
UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio c... 44 0.002
UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12; Bacteri... 44 0.002
UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1; Neoricke... 44 0.002
UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;... 43 0.003
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 43 0.004
UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae ... 42 0.006
UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6; Bacteria... 42 0.006
UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;... 41 0.015
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 40 0.020
UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporid... 38 0.14
UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1; Thraustochyt... 35 0.73
UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep... 33 3.0
UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong sub-... 33 3.9
UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: W... 32 5.2
UniRef50_A7Q5M3 Cluster: Chromosome undetermined scaffold_53, wh... 32 5.2
UniRef50_A1RXI7 Cluster: Methyltransferase type 11; n=1; Thermof... 32 5.2
UniRef50_Q58718 Cluster: DNA double-strand break repair rad50 AT... 32 5.2
UniRef50_Q8D245 Cluster: Phosphoribosylamine--glycine ligase; n=... 31 9.0
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 232 bits (567), Expect = 3e-60
Identities = 111/122 (90%), Positives = 114/122 (93%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKI 271
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSF IRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 272 AVHCTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 451
AVHCTVRGAKAEEILE+GLKVREYELR +NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 452 XF 457
F
Sbjct: 129 DF 130
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 204 bits (498), Expect = 7e-52
Identities = 99/123 (80%), Positives = 109/123 (88%)
Frame = +2
Query: 89 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEK 268
++N MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+F IRRNEK
Sbjct: 5 AQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEK 64
Query: 269 IAVHCTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDLGIKYDPSIGIYG 448
IAVH TVRG KAEEILERGLKV+EY+LR NFSATGNFGFGI EHIDLGIKYDPSIGI+G
Sbjct: 65 IAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFG 124
Query: 449 LXF 457
+ F
Sbjct: 125 MDF 127
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 190 bits (462), Expect = 2e-47
Identities = 92/121 (76%), Positives = 103/121 (85%)
Frame = +2
Query: 95 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIA 274
N MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSF IRRNEKIA
Sbjct: 9 NPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
Query: 275 VHCTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLX 454
+ TVRG KA ++LE GLKV+EYEL NFS TG FGFGIQEHIDLGIKYDPS GIYG+
Sbjct: 69 CYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128
Query: 455 F 457
F
Sbjct: 129 F 129
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 182 bits (444), Expect = 2e-45
Identities = 86/125 (68%), Positives = 103/125 (82%), Gaps = 2/125 (1%)
Frame = +2
Query: 83 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRN 262
+ +NVMR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVRSF IRRN
Sbjct: 33 ETKENVMRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRSFGIRRN 92
Query: 263 EKIAVHCTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDLGIKYDPSIGI 442
EKI+V CT+RG +A +IL RGL+V+E EL+ NFS +GNFGFGIQEHIDLG+KYDP GI
Sbjct: 93 EKISVFCTIRGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGI 152
Query: 443 --YGL 451
YGL
Sbjct: 153 FRYGL 157
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 165 bits (400), Expect = 5e-40
Identities = 78/87 (89%), Positives = 81/87 (93%)
Frame = +2
Query: 197 TGQQPVFSKARYTVRSFXIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRXDNFSATG 376
+GQ PV SKARYTVRSF IRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR +NFS TG
Sbjct: 98 SGQAPVESKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTG 157
Query: 377 NFGFGIQEHIDLGIKYDPSIGIYGLXF 457
NFGFGIQEHIDLGIKYDPSIGIYGL F
Sbjct: 158 NFGFGIQEHIDLGIKYDPSIGIYGLDF 184
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 122 bits (293), Expect = 5e-27
Identities = 58/121 (47%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKI 271
++ MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R+F +R+ E I
Sbjct: 24 RSPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENI 83
Query: 272 AVHCTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYG 448
AV T+RG KA L+R L + ++ + GN FGI+EHI + G+KYDP +GI G
Sbjct: 84 AVMVTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILG 143
Query: 449 L 451
+
Sbjct: 144 M 144
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 118 bits (283), Expect = 8e-26
Identities = 54/113 (47%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Frame = +2
Query: 116 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIAVHCTVRG 295
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R F IRR E IAV T+RG
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIRQFGIRRGENIAVMVTLRG 97
Query: 296 AKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 451
+A E L++ L+ ++++ +F GN GFGI+EHI + G +YDP +GI+G+
Sbjct: 98 QRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGM 150
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 109 bits (263), Expect = 2e-23
Identities = 59/124 (47%), Positives = 77/124 (62%), Gaps = 4/124 (3%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKI 271
K M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T +F IR+ I
Sbjct: 9 KEPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPI 68
Query: 272 AVHCTVRGAKAEEILER---GLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIG 439
+ T+RG KAEE L+ K L +F GNF FG+ EHID G KYDPS+G
Sbjct: 69 GLKVTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVG 128
Query: 440 IYGL 451
IYG+
Sbjct: 129 IYGM 132
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 104 bits (249), Expect = 1e-21
Identities = 53/124 (42%), Positives = 77/124 (62%), Gaps = 1/124 (0%)
Frame = +2
Query: 83 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRN 262
+ ++N MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR F IR+
Sbjct: 3 ETTENSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKG 62
Query: 263 EKIAVHCTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIG 439
I V T+R A L+ ++Y++ +F GN FGI ++ D G+KYDP IG
Sbjct: 63 LNIGVKVTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIG 122
Query: 440 IYGL 451
I+G+
Sbjct: 123 IFGM 126
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 103 bits (248), Expect = 1e-21
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Frame = +2
Query: 89 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEK 268
++N MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+++F IR+ E
Sbjct: 12 NENPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEA 71
Query: 269 IAVHCTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 445
I + T+RG KA + L+ L V+E L + G F FGI EHIDL G+ YDP +GI+
Sbjct: 72 IGIKVTLRGEKALKFLKDALTVKENRLSRKSI-GEGYFAFGIAEHIDLPGVDYDPDVGIF 130
Query: 446 GL 451
G+
Sbjct: 131 GM 132
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 101 bits (243), Expect = 6e-21
Identities = 49/120 (40%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Frame = +2
Query: 95 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIA 274
NVMR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 275 VHCTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 451
T+RG +A++ LE L + + L F + GN FGI+EH D G+KYDP+IG++G+
Sbjct: 63 CKVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGM 122
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 101 bits (242), Expect = 7e-21
Identities = 49/122 (40%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Frame = +2
Query: 89 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEK 268
+++ M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R + +R+ E
Sbjct: 5 TESPMKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEP 64
Query: 269 IAVHCTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 445
I V T+RG A+ +L+R L+ + + F GN+ FGI+EHID+ G+KY+PSIGI
Sbjct: 65 IGVAVTIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGIL 124
Query: 446 GL 451
GL
Sbjct: 125 GL 126
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 100 bits (239), Expect = 2e-20
Identities = 54/119 (45%), Positives = 82/119 (68%), Gaps = 2/119 (1%)
Frame = +2
Query: 101 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIAVH 280
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V + IR I V
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVK 64
Query: 281 CTVRGAKAEEIL-ERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 451
T+RG KA +IL E+ L +++++ +F+ G FGFGI E+I + G+KYDP +G+ GL
Sbjct: 65 VTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGL 122
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 99.5 bits (237), Expect = 3e-20
Identities = 50/120 (41%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Frame = +2
Query: 95 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIA 274
N M + I K ++I VGE+G++L+RA +LEQ+ Q PV + ++ T F IR+ + IA
Sbjct: 2 NPMNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSKVTNPEFGIRKRQPIA 61
Query: 275 VHCTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 451
T+RG KA++ +E L+ ++ F A GN FGI+EHID+ G+KY+P IGI+G+
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGM 121
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 98.7 bits (235), Expect = 5e-20
Identities = 47/120 (39%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Frame = +2
Query: 95 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIA 274
N MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NPMRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 275 VHCTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 451
T+RG +A+E L ++ E L F + GN FGI+EH D G++YDP+IG++G+
Sbjct: 63 CKVTLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGM 122
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 97.5 bits (232), Expect = 1e-19
Identities = 44/117 (37%), Positives = 74/117 (63%)
Frame = +2
Query: 101 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIAVH 280
M+ + + KL L+I VG SG L +++K+L++++ Q P F A+ T+++F IRR E I+
Sbjct: 1 MKQIFLNKLILSIDVGSSGSNLYKSSKLLKKISLQFPSFGMAKRTIKTFSIRRGEYISCF 60
Query: 281 CTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 451
C++ K L + LK++ + + NFS T FG GI +H++LG +D IGI+G+
Sbjct: 61 CSLSKKKGILFLYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNFDQKIGIHGI 117
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 97.1 bits (231), Expect = 2e-19
Identities = 49/117 (41%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Frame = +2
Query: 101 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIAVH 280
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++ F IRR E I +
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLL 91
Query: 281 CTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYG 448
T+R +A L R L ++ LR ++F+A GN FGI+EHI + G +YDP++GI+G
Sbjct: 92 VTLRRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFG 147
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 96.7 bits (230), Expect = 2e-19
Identities = 45/116 (38%), Positives = 74/116 (63%)
Frame = -3
Query: 448 SINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFFCFSSSDCTMDSN 269
++N++ +VLDTQ++VFL+TE ++T EV Q +F D QT +DFF +++ +DSN
Sbjct: 55 TVNTDTWVVLDTQIDVFLDTETEVTGSREVSVSQLVFLDLQTSFQDFFSLWTTNSNVDSN 114
Query: 268 LFITTDXKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 101
LF+++D + + SLG L+ +L Q+LG + Q VT FTN +Q + D++ H
Sbjct: 115 LFVSSDTESSDSVSSLGLNWSLTRQLFQNLGSSGQSVTRFTNRNIQDQFLDLQFTH 170
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 94.7 bits (225), Expect = 9e-19
Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = +2
Query: 101 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIAVH 280
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV F IR + I
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 73
Query: 281 CTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 451
T+R AEE L+ L + EL F TGNF FG++EH + +YDPSIGIYGL
Sbjct: 74 VTLRDEMAEEFLQTALPLA--ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGL 129
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 93.5 bits (222), Expect = 2e-18
Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 1/118 (0%)
Frame = +2
Query: 101 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIAVH 280
MR + + K+ LN+ VG+SG+ + A + L +++G++P A T R F +R+ E I
Sbjct: 5 MRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRKGEPIGAA 64
Query: 281 CTVRGAKAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 451
T+RG A + R + + +++ +F GNF FGI EHID+ GIKYDP IGI GL
Sbjct: 65 VTIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGL 122
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 84.6 bits (200), Expect = 9e-16
Identities = 49/114 (42%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = +2
Query: 116 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIAVHCTVRG 295
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R R I T+R
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNRDLGTRLGAPIGCKVTIRD 65
Query: 296 A-KAEEILERGLKVREYELRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 451
A K + L+ VRE L NF +GN FGI ++ D KYDP IGIYG+
Sbjct: 66 ADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDPDIGIYGM 119
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 73.3 bits (172), Expect = 2e-12
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Frame = -3
Query: 427 IVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFF-CFSSSDCTMDSNLFITTD 251
+VLD +VNVF +TE ++TRG EV +F F + L++ ++ + +LF+T +
Sbjct: 91 VVLDAEVNVFADTETEVTRGAEVALEEFEFLHLEPALQNLHRLVPVTNGDVRGDLFVTAN 150
Query: 250 XKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 101
+R H + LG+ RLL+ +LLQHL + +T N V+ +L + PH
Sbjct: 151 AERAHGVARLGEDRLLTGQLLQHLRRLREAITALANANVEHELVNADRPH 200
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 64.9 bits (151), Expect = 8e-10
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRN 262
K+VM+ I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++ SF IR+
Sbjct: 23 KSVMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIASFKIRQG 82
Query: 263 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHIDL-GIK 421
++I T+R + E ER + ++R++ L +F GN+ GI+E I I
Sbjct: 83 QEIGCKVTLRRKRMWEFFERLISIAIPRIRDFRGLSIKSFDGYGNYTMGIREQIIFPEIN 142
Query: 422 YDPSIGIYGL 451
YD GI G+
Sbjct: 143 YDTIDGIRGM 152
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 64.5 bits (150), Expect = 1e-09
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Frame = +2
Query: 95 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNE 265
NVM + K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++ F IR
Sbjct: 24 NVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREGW 83
Query: 266 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHIDL-GIKY 424
I V T+R + E L+R L +VR++ L +F GN+ G++E I I Y
Sbjct: 84 PIGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAKSFDGRGNYSMGVKEQIIFPEIDY 143
Query: 425 DPSIGIYGL 451
D + GL
Sbjct: 144 DKIDALRGL 152
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 62.9 bits (146), Expect = 3e-09
Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 9/116 (7%)
Frame = +2
Query: 86 NSKNVMRNLHIRKLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIR 256
N KN+ + + K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++ +F IR
Sbjct: 25 NYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSISNFKIR 84
Query: 257 RNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHI 406
+ I + T+RGA+ L + + KVR++ L ++F GN+ FG+ E +
Sbjct: 85 KGMPIGLKVTLRGARMYNFLYKLINIVLPKVRDFRGLDPNSFDGRGNYSFGLSEQL 140
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 60.1 bits (139), Expect = 2e-08
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 8/111 (7%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNE 265
KNVM+ + K+ ++ +G +R T A K + +TGQ+PV +KAR V +F +R
Sbjct: 23 KNVMQIPKLEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNVSNFKLRVGM 82
Query: 266 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQE 400
+ V T+RG++ E L+R + +VR++ + F GN+ GI +
Sbjct: 83 PVGVMVTLRGSRMYEFLDRFVHNALPRVRDFRGIPKTGFDGVGNYNLGISD 133
>UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125;
Bacteria|Rep: 50S ribosomal protein L5 -
Propionibacterium acnes
Length = 210
Score = 56.4 bits (130), Expect = 3e-07
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 10/130 (7%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRN 262
+N M + K+ +N+ VG++ + A + + +TGQ+P +KAR ++ F +R
Sbjct: 32 RNPMLIPGLEKIVVNMGVGDAAHDSKVMDGAIRDITAITGQKPQVTKARKSIAQFKLREG 91
Query: 263 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHI-DLGIK 421
+ I H T+RG + E +R L ++R++ L + F GN+ FG+ E + L I
Sbjct: 92 QPIGCHVTLRGDRMWEFADRLLTLALPRIRDFRGLNSNQFDGKGNYTFGLSEQVMFLEID 151
Query: 422 YDPSIGIYGL 451
D + I G+
Sbjct: 152 QDKIVRIRGM 161
>UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22;
Bacteria|Rep: 50S ribosomal protein L5 - Onion yellows
phytoplasma
Length = 181
Score = 52.8 bits (121), Expect = 3e-06
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Frame = +2
Query: 86 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQL---TGQQPVFSKARYTVRSFXIR 256
N K+VM+ + K+ +N+ VG++ + V+E+L +GQ PV +KA+ + +F +R
Sbjct: 23 NYKSVMQVPKVEKVVINMGVGDAIFNVKVLDDVVEELKLLSGQSPVITKAKKAISNFKLR 82
Query: 257 RNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHI 406
I T+RGA+ E L + +VR++ + +F GN+ G++E I
Sbjct: 83 EGMPIGAKVTLRGARKEAFLCKLTRLVFPRVRDFRGISGKSFDGRGNYALGLKEQI 138
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 51.6 bits (118), Expect = 8e-06
Identities = 33/116 (28%), Positives = 58/116 (50%)
Frame = -3
Query: 448 SINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFFCFSSSDCTMDSN 269
+I+++ +VLD ++NVF + E +++ GGE QF D + L D +++ + +
Sbjct: 83 TIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLDAEAALDDLAGLFAANGDVCGD 142
Query: 268 LFITTDXKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 101
L D + LG+ RLL ELL+ L Q V ++ V+ +L + PH
Sbjct: 143 LLTAADPEAADGEARLGERRLLVGELLEDLSSLCQRVALSSDADVEDELLNADTPH 198
>UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L5 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 189
Score = 51.2 bits (117), Expect = 1e-05
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Frame = +2
Query: 116 IRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIAVHCT 286
I+K+ + +CVG++ + K + +TGQ+P KA+ ++ +F +R+ IA T
Sbjct: 36 IKKIVVTMCVGDAVVDSKIIYYVKKCMAMITGQEPGLIKAKKSIAAFKLRKGMPIACKVT 95
Query: 287 VRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQE 400
+R +AE+ + R + ++++++ +F GNF FGI++
Sbjct: 96 LRKKRAEDFIRRLVFEVFPRIKDFKGFSIKSFDREGNFSFGIKD 139
>UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77;
Bacteria|Rep: 50S ribosomal protein L5 - Desulfotalea
psychrophila
Length = 179
Score = 50.8 bits (116), Expect = 1e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Frame = +2
Query: 95 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNE 265
N M+ I K+ LN+ +GE+ + AA+ L ++ GQ+ V +KA+ ++ +F +R
Sbjct: 24 NPMQIPKIEKIVLNMGLGEAVQNPKIVEGAAEELTKIAGQRAVVTKAKKSIATFKLREGM 83
Query: 266 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHI 406
I T+RG K + L + + +VR++ + F GN+ GIQE I
Sbjct: 84 PIGCRVTLRGEKMYDFLSKLVNIALPRVRDFRGVSPKGFDGRGNYSMGIQEQI 136
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 50.4 bits (115), Expect = 2e-05
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGD--RLTRAAKV-LEQLTGQQPVFSKARYTVRSFXIRRN 262
KN + K+ +N+ +G G ++ ++ + L ++TGQ+P +K + +V +F R+
Sbjct: 24 KNTYMGPKVEKVVINMGLGLDGADAKIMKSTEEDLGKITGQKPTVTKFKKSVANFKTRKG 83
Query: 263 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHI 406
+ T+RG K E L+R + +++++ L F GN+ FGI+EHI
Sbjct: 84 TNAGLKVTLRGNKMYEFLDRLVNIALPRIKDFRGLSPKGFDKFGNYTFGIKEHI 137
>UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n=5;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Chara vulgaris (Common stonewort)
Length = 189
Score = 50.0 bits (114), Expect = 2e-05
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Frame = +2
Query: 95 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNE 265
N+ + +++K+ +N GE+ L K L + Q+P+ ++AR + F IR+
Sbjct: 25 NIHQLPYLKKIVINCGFGEASQNSKFLEGTIKDLSIIASQKPIVTRARKAIAGFQIRKKM 84
Query: 266 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHIDL-GIKY 424
+ V T+RG L+R + ++++++ L +F GNF FGI+E + I Y
Sbjct: 85 PVGVCVTLRGETMYAFLDRLIHLALPRIKDFQGLNWKSFDGYGNFHFGIREQLIFPEIHY 144
Query: 425 DPSIGIYGL 451
D I G+
Sbjct: 145 DKIDKIRGM 153
>UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellular
organisms|Rep: 50S ribosomal protein L5 - Synechocystis
sp. (strain PCC 6803)
Length = 180
Score = 48.8 bits (111), Expect = 6e-05
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRN 262
KN+ + + K+ +N +GE+ L + L +TGQ+PV ++AR + F IR
Sbjct: 24 KNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITGQKPVVTRARKAIAGFKIREG 83
Query: 263 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHIDL-GIK 421
+ V T+R + L+R + ++R++ + ++F GN+ GI+E + I
Sbjct: 84 MPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSFDGRGNYSLGIREQLIFPEID 143
Query: 422 YDPSIGIYGL 451
YD I G+
Sbjct: 144 YDTIDQIRGM 153
>UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Gracilaria tenuistipitata var. liui (Red alga)
Length = 179
Score = 48.8 bits (111), Expect = 6e-05
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRN 262
KN+ + + K+ +N +GE+ + L ++ + +TGQ+P +K++ + F IR N
Sbjct: 24 KNIHQIPKLVKITINRGLGEAANNKQVLEKSMNEIAAITGQKPKITKSKKAIAGFKIREN 83
Query: 263 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHIDL-GIK 421
I + T+R K + L + + ++R++ + F GN+ G++E I IK
Sbjct: 84 IAIGLVVTLRRDKMYDFLNKLINLALPRIRDFRGISYKTFDGRGNYNLGLKEQIIFPEIK 143
Query: 422 YDPSIGIYGL 451
YD I GL
Sbjct: 144 YDNVDKIRGL 153
>UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast
precursor; n=43; cellular organisms|Rep: 50S ribosomal
protein L5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 262
Score = 48.4 bits (110), Expect = 7e-05
Identities = 26/111 (23%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Frame = +2
Query: 95 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNE 265
N+ + ++K+ +N +G++ L A K + +TGQ+P+ ++AR ++ +F IR ++
Sbjct: 79 NIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQ 138
Query: 266 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQE 400
+ + T+RG L+R + + R+++ + +F GN+ G+++
Sbjct: 139 PLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKD 189
>UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L5 - candidate division TM7 genomosp. GTL1
Length = 194
Score = 48.0 bits (109), Expect = 1e-04
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +2
Query: 176 AKVLEQLTGQQPVFSKARYTVRSFXIRRN-EKIAVHCTVRGAKAEEILERGLKVREYELR 352
+ L ++TGQQPV AR ++ SF IR +I V T+RGA+ E L+R + + +R
Sbjct: 64 SNTLRKITGQQPVDRMARKSIASFKIRSGMNRIGVSVTLRGARMYEFLDRLVNIALPRVR 123
Query: 353 XDNFSATGNFGFGIQEHIDLGIKYDPSI 436
+F G GF + LGI D SI
Sbjct: 124 --DFHGVGAKGFDHSGNYSLGIT-DQSI 148
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 47.6 bits (108), Expect = 1e-04
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKI 271
KN+M I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++ SF +R++ I
Sbjct: 21 KNIMEIPSIKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSISSFNLRKDMYI 79
Query: 272 AVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQE---HIDLGIKY 424
A T++ + + + K+RE++ DN + N+ I+ ++ ++
Sbjct: 80 ACKVTLQKKNMYNFINKLINIVLPKIREFKGFSVDNIDSQNNYTLSIKNMSIFPEIEYQF 139
Query: 425 DPSIGIYGL 451
D IYG+
Sbjct: 140 DIFNKIYGM 148
>UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Bacillariophyta|Rep: Chloroplast 50S ribosomal protein
L5 - Odontella sinensis (Marine centric diatom)
Length = 238
Score = 44.4 bits (100), Expect = 0.001
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +2
Query: 164 LTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIAVHCTVRGAKAEEILERGL----- 328
L ++ +TGQ+P+ ++A+ + F IR N ++ + T+RG+K L + +
Sbjct: 68 LKKSINEFTAITGQKPIITRAKKAIAGFKIRENMELGLTVTLRGSKMYSFLTKLIFFTFA 127
Query: 329 KVREYE-LRXDNFSATGNFGFGIQEHI 406
++R++ L +F GN+ G++E +
Sbjct: 128 QIRDFRGLSVRSFDKAGNYTLGLKEQL 154
>UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio
cholerae NCTC 8457|Rep: 50S ribosomal protein L5 -
Vibrio cholerae NCTC 8457
Length = 112
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +2
Query: 95 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNE 265
+VM+ I K+ LN+ VGE+ D+ L AA + ++GQ+P+ +KAR +V F IR
Sbjct: 24 SVMQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGY 83
Query: 266 KIAVHCTVRGAK 301
I T+RG +
Sbjct: 84 PIGCKVTLRGER 95
>UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12;
Bacteria|Rep: 50S ribosomal protein L5 - Mycoplasma
mobile
Length = 182
Score = 44.0 bits (99), Expect = 0.002
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLT---GQQPVFSKARYTVRSFXIRRN 262
K+ M+ I+K+ +N+ G +V+ +LT GQ P + A+ ++ SF IR
Sbjct: 23 KSPMQIPRIKKIVINMTAGNEVSNTKAVEEVINELTLITGQTPYKTHAKKSLASFKIREG 82
Query: 263 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHI 406
+ T+R K + L++ + ++R++ + +F GNF GI+E I
Sbjct: 83 MPMGGKVTLRRDKMWDFLQKLIDIVIPRIRDFRGISPKSFDGRGNFALGIEEEI 136
>UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 50S ribosomal
protein L5 - Neorickettsia sennetsu (strain Miyayama)
Length = 177
Score = 43.6 bits (98), Expect = 0.002
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Frame = +2
Query: 122 KLCLNICVG-ESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIAVHCTVR 292
K+CL++ +G S D L A + L + GQ+ V + A+ ++ SF +R+ + T+R
Sbjct: 31 KVCLSVGLGGASSDSKLLASAVEDLSLIAGQKAVVTVAKKSISSFKLRKGFPVGCRVTLR 90
Query: 293 GAKAEEILERGLKV-----REYE-LRXDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 451
+ + + R L + ++++ NF GN FG+ EHI + +D + I G+
Sbjct: 91 KRRMFDFINRLLYMALPDQKDFKGFTMRNFDGHGNMAFGLTEHIVFPEVDFDKTYRIIGM 150
>UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;
n=3; cellular organisms|Rep: Mitochondrial 60S ribosomal
protein L5 - Reclinomonas americana
Length = 182
Score = 43.2 bits (97), Expect = 0.003
Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Frame = +2
Query: 116 IRKLCLNICVGESGD---RLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKIAVHCT 286
I K+ +N+ V E+ ++ +LE +TGQ+ + +KA+ ++ +F IR+ I V T
Sbjct: 31 IDKIIVNMGVKEAASDKKQILAPLLILELITGQKAIVTKAKKSISNFKIRKGFPIGVSVT 90
Query: 287 VRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHI---DLGIKYDPSIG 439
+RG E L + + K+R+++ + + + G+ GI++ + ++ +YD
Sbjct: 91 LRGNNMYEFLSKLITLVLPKIRDFKGVPFTSINKYGHLAIGIKDLLVFPEIESEYDKFNR 150
Query: 440 IYG 448
+YG
Sbjct: 151 VYG 153
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 42.7 bits (96), Expect = 0.004
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVG---ESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRN 262
KN M+ + K+ +++ G + + + + GQ+ A+ +V F +R
Sbjct: 22 KNPMQTPALEKIVISVGAGFAMKDNKLIQNIEDTITTIAGQKASTVIAKKSVAGFKVREG 81
Query: 263 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHIDL-GIK 421
+ V T+RG K +R + +V+++ + + F GN+ FG+QE + +
Sbjct: 82 MPVGVRVTLRGEKMYNFFDRLVSMALPRVKDFRGVPRNGFDGRGNYNFGLQEQLIFPEVS 141
Query: 422 YDPSIGIYGL 451
YD + I+G+
Sbjct: 142 YDSVMQIHGM 151
>UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L5 - Opitutaceae
bacterium TAV2
Length = 204
Score = 41.9 bits (94), Expect = 0.006
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKV---LEQLTGQQPVFSKARYTVRSFXIRRN 262
KN I K+ LN + D+ T+ A + L + GQ+PV +K+R V +F +R+
Sbjct: 33 KNKHEVPQIVKINLNTGIDAEADK-TQIADIQRDLGNIAGQKPVLTKSRKAVSNFKLRQG 91
Query: 263 EKIAVHCTVRGAKAEEILERGLKV-----REYELRXDNFSATGNFGFGIQE 400
+ + + T+RG E L R L V R++ GN+ GI +
Sbjct: 92 QIVGAYVTLRGNAMWEFLYRLLAVALPTIRDFRGVPAKLDGRGNYNLGISD 142
>UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6;
Bacteria|Rep: 50S ribosomal protein L5 - Helicobacter
pylori (Campylobacter pylori)
Length = 181
Score = 41.9 bits (94), Expect = 0.006
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLT---RAAKVLEQLTGQQPVFSKARYTVRSFXIRRN 262
KN M + K+ +++ G + A+ + + GQ+ V +KA+ +V F IR
Sbjct: 23 KNPMLLPKLEKIVISVGAGAHAKDMKIMQNIAQTISLIAGQKAVITKAKKSVAGFKIREG 82
Query: 263 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHIDL-GIK 421
+ T+R + LE+ + +V+++ + + F GN+ FGI E + +
Sbjct: 83 MAVGAKVTLRNKRMYNFLEKLIVISLPRVKDFRGISRNGFDGCGNYTFGINEQLIFPEVV 142
Query: 422 YDPSIGIYGL 451
YD + +G+
Sbjct: 143 YDDIMVSHGM 152
>UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;
n=1; Prototheca wickerhamii|Rep: Mitochondrial 60S
ribosomal protein L5 - Prototheca wickerhamii
Length = 231
Score = 40.7 bits (91), Expect = 0.015
Identities = 24/100 (24%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNIC----VGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRR 259
KN+M + + K+ N GE + + A LE +TGQ+P ++ A+ ++ +F +R+
Sbjct: 60 KNIMECVSLNKIVCNTSSKHYAGEK-ESILPAFTALEMITGQKPKYTCAKKSISTFKLRQ 118
Query: 260 NEKIAVHCTVRGAKAEEILERGLKVREYELR--XDNFSAT 373
N+ + ++RG LE+ + + ++ +N+S++
Sbjct: 119 NQILGCKNSLRGNTMYRFLEKYISIVSTRIKDWSENYSSS 158
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 40.3 bits (90), Expect = 0.020
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 257 RNEKIAVHCTVRGAKAEEILERGLKVREYEL 349
R KIA + TV+G KA +LE GLKV+EYEL
Sbjct: 114 RYTKIACYVTVKGEKAMRLLESGLKVKEYEL 144
>UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporidium
sp. ex Simulium jonesii|Rep: Ribosomal protein L5 -
Helicosporidium sp. subsp. Simulium jonesii (Green alga)
Length = 181
Score = 37.5 bits (83), Expect = 0.14
Identities = 28/129 (21%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Frame = +2
Query: 86 NSKNVMRNLHIRKLCLNICVG-----ESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFX 250
N K + I+K+ ++ +G E + + + K +TGQ+P ++A+ + +F
Sbjct: 22 NKKKALEVPVIKKIVISRGIGKANTLEINNYIEESIKEFLIMTGQKPKLNRAKKHIAAFK 81
Query: 251 IRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRXDNFSATGNFGFGIQEHIDL 412
I++ + + T+RGAK L + + +R+++ + F + GN F I ++
Sbjct: 82 IKKKMILGLSVTLRGAKMYAFLYKFINIILPNIRQFQGIENKQFDSLGNITFPIYSQSNI 141
Query: 413 -GIKYDPSI 436
+ Y+P +
Sbjct: 142 PELPYNPRV 150
>UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L5 -
Thraustochytrium aureum
Length = 190
Score = 35.1 bits (77), Expect = 0.73
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = +2
Query: 92 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRNEKI 271
K V ++ R LN S L ++E +TGQ+P S ++ +F IR+ + +
Sbjct: 32 KEVFIHISFRSSFLN---ASSNVVLVSCIFIIELITGQKPKISFSKKDNSNFNIRKGDLV 88
Query: 272 AVHCTVRGAKAEEILER 322
++ T+RG + +E+
Sbjct: 89 GIYVTLRGPRIFSFIEK 105
>UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep:
F13M7.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 665
Score = 33.1 bits (72), Expect = 3.0
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +2
Query: 308 EILERGLKVREYELRX--DNFSATGNFGFGIQEH---IDLGIKYDPSIG 439
E+LE+GLK EY + S +G G GI+ H +D GIK D +IG
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIG 331
>UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong
sub-class; n=2; Oryza sativa|Rep: Transposon protein,
putative, Pong sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 596
Score = 32.7 bits (71), Expect = 3.9
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 263 EKIAVHCTVRGAKAEEILERGLK 331
EKIA + TVRG KA ++LE GLK
Sbjct: 280 EKIACYVTVRGEKAMQLLESGLK 302
>UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: Wbgx
protein - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 377
Score = 32.3 bits (70), Expect = 5.2
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 305 EEILERGLKVREYELRXDNFSATGNFGFGIQEHIDLGIKYD 427
+E+ +R +R + + D+F GN G+ + + +D+G KYD
Sbjct: 199 DEMAKRARLIRNHAIVNDSFDKDGNLGY-VYDVVDIGQKYD 238
>UniRef50_A7Q5M3 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=4; Vitis vinifera|Rep:
Chromosome undetermined scaffold_53, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 1341
Score = 32.3 bits (70), Expect = 5.2
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -3
Query: 241 PHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 101
P C+PSL R+++CE L+ T Y+ A + +PH
Sbjct: 1131 PECLPSLKSLRIINCEGLECFPARGLSTPTLTELYISACQNLKSLPH 1177
>UniRef50_A1RXI7 Cluster: Methyltransferase type 11; n=1;
Thermofilum pendens Hrk 5|Rep: Methyltransferase type 11
- Thermofilum pendens (strain Hrk 5)
Length = 297
Score = 32.3 bits (70), Expect = 5.2
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2
Query: 185 LEQLTGQQPVFSKARYTVRSFXIRRNEKIAVHCTVRGAKAEEILERGLKVREYE 346
+ +TG P+ S A VR + R EK+ CT G A LERG +V E
Sbjct: 121 MHNITGIDPL-SDAERKVRMLGVARGEKVLDVCTGLGYTAIRALERGAEVVSIE 173
>UniRef50_Q58718 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Methanocaldococcus jannaschii|Rep: DNA
double-strand break repair rad50 ATPase - Methanococcus
jannaschii
Length = 1005
Score = 32.3 bits (70), Expect = 5.2
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +2
Query: 83 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFXIRRN 262
+ K V+ NL K+ LN +GE + R K+L++L + + + ++
Sbjct: 458 EEKKKVLENLQKEKIELNKKLGEINSEIKRLKKILDELKEVEGKCPLCKTPIDE--NKKM 515
Query: 263 EKIAVHCTVRGAKAEEILERGLKVREYE 346
E I H T K E+ E K+RE E
Sbjct: 516 ELINQHKTQLNNKYTELEEINKKIREIE 543
>UniRef50_Q8D245 Cluster: Phosphoribosylamine--glycine ligase; n=1;
Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis|Rep: Phosphoribosylamine--glycine ligase -
Wigglesworthia glossinidia brevipalpis
Length = 434
Score = 31.5 bits (68), Expect = 9.0
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = -3
Query: 343 IFSDFQTPLKDFFCFSSSDCTMDSNLFITTDXKRPHCIPSLGK 215
I +F+ LKD F SS ++ NL TT+ R CI SLGK
Sbjct: 351 ILGNFENELKDTKIFHSSTKNINKNL--TTNGGRVLCITSLGK 391
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,753,122
Number of Sequences: 1657284
Number of extensions: 7520636
Number of successful extensions: 20137
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 19617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20107
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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