Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_A06
         (916 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R3L7 Cluster: GLP_39_87490_85673; n=1; Giardia lambli...    35   2.5  
UniRef50_O75106-2 Cluster: Isoform Short of O75106 ; n=2; Euarch...    35   3.3  
UniRef50_Q4YNB3 Cluster: Putative uncharacterized protein; n=4; ...    33   7.7  

>UniRef50_Q7R3L7 Cluster: GLP_39_87490_85673; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_39_87490_85673 - Giardia lamblia
           ATCC 50803
          Length = 605

 Score = 35.1 bits (77), Expect = 2.5
 Identities = 40/175 (22%), Positives = 70/175 (40%), Gaps = 5/175 (2%)
 Frame = +2

Query: 164 SSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTNVH 343
           +S+A QE P+++      +PR T + KT    S +  G   + K KT    ++I K  V 
Sbjct: 144 ASVAKQEPPKKKTTPTTKKPR-TESAKTLGPASKEDAGVKKTTK-KTPAAASEISKPTVK 201

Query: 344 SGGDGCLLLERTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEALSNEDV 523
                    +     G+  I  +  +  RP    S    + D      +  +   ++E+ 
Sbjct: 202 K----TTKKKAKKADGLD-IDGEEHESIRPSTNESFQEFTGDDSDTSDEGLDLQSTDEES 256

Query: 524 EPAPVYDFRAIEETAPRDKCLYSSFFE-----PPLHQSAEEYCANRDMQRLRRCE 673
           E   V +    EE+ P +K    + FE     PPL  + ++Y A R +     C+
Sbjct: 257 ESDGVAENP--EESDPNEKLQIDACFENLDDAPPLAYNIDDYTARRALMHTIHCD 309


>UniRef50_O75106-2 Cluster: Isoform Short of O75106 ; n=2;
           Euarchontoglires|Rep: Isoform Short of O75106 - Homo
           sapiens (Human)
          Length = 729

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 500 LHQLGVEFFLGLDSWS-AHWNMHQVAILGHYHLELKEYHLEWFS 372
           LH +G+E  L   +   AHW + QV  LGHY+ +L +   E+ S
Sbjct: 234 LHPVGLELLLDHRALDPAHWTVQQVFYLGHYYADLGQLEREFKS 277


>UniRef50_Q4YNB3 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 758

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 24/89 (26%), Positives = 38/89 (42%)
 Frame = +2

Query: 260 SSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 439
           S  S+      KR+   N  QI K +     +G +  +R T +   ++ D NDQ +    
Sbjct: 486 SDDSLLEFSKIKREERNNNKQI-KNHKQVYSNGLINNQRNTYNNDNILNDKNDQNFENAK 544

Query: 440 YSSEHSMSQDQGKIQHQVDEEALSNEDVE 526
           YS+    S D GK Q+    +   N  V+
Sbjct: 545 YSNNRKHSIDLGKKQYSELIQEYKNRKVQ 573


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,226,958
Number of Sequences: 1657284
Number of extensions: 14449622
Number of successful extensions: 40409
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 38668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40366
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)