Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0014
         (562 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RPB6 Cluster: Putative uncharacterized protein PY0154...    37   0.28 
UniRef50_A0BZH6 Cluster: Chromosome undetermined scaffold_139, w...    35   1.1  
UniRef50_Q9HFR4 Cluster: Autophagy-related protein 2; n=2; Fungi...    33   4.6  
UniRef50_Q4YKY1 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_A0D5L2 Cluster: Chromosome undetermined scaffold_39, wh...    33   6.0  
UniRef50_Q4Y0J7 Cluster: Putative uncharacterized protein; n=1; ...    32   8.0  

>UniRef50_Q7RPB6 Cluster: Putative uncharacterized protein PY01543;
           n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01543 - Plasmodium yoelii yoelii
          Length = 1776

 Score = 37.1 bits (82), Expect = 0.28
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = -1

Query: 202 FHKNNSSKCNFLSVIMFSSLVLFNLIKLT*HYYC--HITDVFLILEINTN 59
           + KNN  KC +L +  FS LV FN++ +    +C  +I+  F+I  +N N
Sbjct: 816 YFKNNCKKCKYLKISNFSILVFFNMLFIIKRIFCNFYISINFIINLLNKN 865


>UniRef50_A0BZH6 Cluster: Chromosome undetermined scaffold_139, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_139, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1791

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
 Frame = +2

Query: 317  VTLNFFFITNKSFLINLSNPSLQI-----CTIIRDL*EYNNYTRRVTYIVPIS*QGYLYN 481
            V LNF  +T  S + NL+  +L++     C +   + +YN     + +I   + + Y+Y 
Sbjct: 1010 VILNFIELTMSSVMTNLNEQNLRLIRGTKCLLFYRVLKYNKMAVAIGHIAQRTFRQYIYL 1069

Query: 482  TYYFISFLFVY 514
            T+ F   +FVY
Sbjct: 1070 TFLFFLVIFVY 1080


>UniRef50_Q9HFR4 Cluster: Autophagy-related protein 2; n=2;
           Fungi/Metazoa group|Rep: Autophagy-related protein 2 -
           Pichia pastoris (Yeast)
          Length = 1862

 Score = 33.1 bits (72), Expect = 4.6
 Identities = 13/35 (37%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = +3

Query: 399 LETYENIIIILDELH-TLSRYPDRVTCIIHTISFR 500
           L+++EN+ II+D++H  +S  P+ +T ++ T+S R
Sbjct: 330 LQSFENVSIIIDQIHVAVSPIPESLTALLETLSKR 364


>UniRef50_Q4YKY1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 75

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 464 QGYLYNTYYFISFLFVY--*KFIFFSFKFLYLLQC 562
           + YLY TY   SFLF Y   +FI     ++YLL C
Sbjct: 22  KNYLYVTYIICSFLFFYNFFEFIVIIIMYIYLLNC 56


>UniRef50_A0D5L2 Cluster: Chromosome undetermined scaffold_39, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_39,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1267

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +2

Query: 275 VGQIVISSISNLGNVTLNFFFITNKSFLINLSNPSLQICTIIRDL*EYNNYTRRVTYIVP 454
           V QI  S IS   N   N F+I +++FLIN  NP+ QI  I+  L + +    ++T   P
Sbjct: 122 VNQINSSYISLPSNSCYNAFYIEDEAFLINCLNPNNQIEYIL--LNQQSEIQDQITVNQP 179

Query: 455 IS 460
           +S
Sbjct: 180 LS 181


>UniRef50_Q4Y0J7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 221

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +2

Query: 476 YNTYYFISFLF-VY*KFIFFSFKFLYLL 556
           ++ YYF SF F ++  FIFFSF FL +L
Sbjct: 68  FSLYYFFSFFFSLFHFFIFFSFAFLAIL 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,463,172
Number of Sequences: 1657284
Number of extensions: 8801578
Number of successful extensions: 19646
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19544
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)