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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0019
         (724 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB724B Cluster: PREDICTED: similar to eukaryotic...   257   2e-67
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor...   244   2e-63
UniRef50_Q8SRZ6 Cluster: PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1;...   187   3e-46
UniRef50_Q98RP4 Cluster: Eukaryotic release factor 1 homolog; n=...   163   3e-39
UniRef50_Q9NAX8 Cluster: Eukaryotic peptide chain release factor...   155   1e-36
UniRef50_Q9NCP1 Cluster: Eukaryotic peptide chain release factor...   152   1e-35
UniRef50_A2EPZ2 Cluster: Eukaryotic release factor 1, putative; ...   143   5e-33
UniRef50_Q5CD84 Cluster: Eukaryotic peptide chain release factor...   122   7e-27
UniRef50_Q965E7 Cluster: Eukaryotic polypeptide chain release fa...   111   2e-23
UniRef50_P58227 Cluster: Peptide chain release factor subunit 1;...   103   3e-21
UniRef50_Q8U0J4 Cluster: Peptide chain release factor subunit 1;...    96   9e-19
UniRef50_A7DMG3 Cluster: ERF1 domain 2 protein; n=1; Candidatus ...    90   6e-17
UniRef50_A0RX46 Cluster: Peptide chain release factor 1; n=2; Cr...    89   8e-17
UniRef50_Q58239 Cluster: Peptide chain release factor subunit 1;...    85   2e-15
UniRef50_Q9HNF0 Cluster: Peptide chain release factor subunit 1;...    83   7e-15
UniRef50_Q8TS00 Cluster: Peptide chain release factor subunit 1-...    80   6e-14
UniRef50_Q74N59 Cluster: NEQ052; n=1; Nanoarchaeum equitans|Rep:...    77   3e-13
UniRef50_Q46FF0 Cluster: Peptide chain release factor, subunit 1...    73   7e-12
UniRef50_Q9YAF1 Cluster: Peptide chain release factor subunit 1;...    66   6e-10
UniRef50_Q8ZU81 Cluster: Peptide chain release factor subunit 1;...    66   1e-09
UniRef50_Q3UUT4 Cluster: 16 days neonate thymus cDNA, RIKEN full...    35   2.3  
UniRef50_A0CCA2 Cluster: Chromosome undetermined scaffold_167, w...    34   4.1  
UniRef50_UPI00006CC094 Cluster: hypothetical protein TTHERM_0021...    33   7.1  

>UniRef50_UPI0000DB724B Cluster: PREDICTED: similar to eukaryotic
           release factor 1 CG5605-PA, isoform A; n=1; Apis
           mellifera|Rep: PREDICTED: similar to eukaryotic release
           factor 1 CG5605-PA, isoform A - Apis mellifera
          Length = 265

 Score =  257 bits (630), Expect = 2e-67
 Identities = 124/126 (98%), Positives = 126/126 (100%)
 Frame = +2

Query: 347 SEESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNI 526
           +EE+SADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNI
Sbjct: 3   NEETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNI 62

Query: 527 KSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINT 706
           KSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINT
Sbjct: 63  KSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINT 122

Query: 707 SLYLCD 724
           SLYLCD
Sbjct: 123 SLYLCD 128


>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
           subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
           chain release factor subunit 1 - Homo sapiens (Human)
          Length = 437

 Score =  244 bits (597), Expect = 2e-63
 Identities = 117/125 (93%), Positives = 121/125 (96%)
 Frame = +2

Query: 350 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 529
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 530 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 709
           SRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 710 LYLCD 724
           LYLCD
Sbjct: 124 LYLCD 128


>UniRef50_Q8SRZ6 Cluster: PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1;
           n=1; Encephalitozoon cuniculi|Rep: PEPTIDE CHAIN RELEASE
           FACTOR SUBUNIT 1 - Encephalitozoon cuniculi
          Length = 386

 Score =  187 bits (455), Expect = 3e-46
 Identities = 83/117 (70%), Positives = 104/117 (88%)
 Frame = +2

Query: 374 VEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSV 553
           VE+W++KKL+++L  +RGNGTSMIS+IIPPKDQISRVSKML DE+GTASNIKSRVNRLSV
Sbjct: 5   VEMWRMKKLLRNLRDSRGNGTSMISIIIPPKDQISRVSKMLTDEYGTASNIKSRVNRLSV 64

Query: 554 LGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 724
           LGAITS Q +LK Y+K PPNGL I+ GT++T++ KEKK+++  EP KP+NTSLY+CD
Sbjct: 65  LGAITSAQSKLKQYSKTPPNGLGIFVGTVLTDQNKEKKISVGIEPIKPVNTSLYMCD 121


>UniRef50_Q98RP4 Cluster: Eukaryotic release factor 1 homolog; n=1;
           Guillardia theta|Rep: Eukaryotic release factor 1
           homolog - Guillardia theta (Cryptomonas phi)
          Length = 409

 Score =  163 bits (397), Expect = 3e-39
 Identities = 74/116 (63%), Positives = 90/116 (77%)
 Frame = +2

Query: 377 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVL 556
           E+WKIKK  + L   +GNGTSMISL+IP  + IS+VSKML+DE  TASNIKSR+NR SVL
Sbjct: 9   ELWKIKKTYQYLSTIKGNGTSMISLVIPSNEHISKVSKMLSDELATASNIKSRINRSSVL 68

Query: 557 GAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 724
            AI+SVQ +LK YTK P NGL+IYCGT   E  KEKK+ I+ EP KP+N+S Y+CD
Sbjct: 69  SAISSVQQKLKYYTKTPNNGLIIYCGTFTDENNKEKKILIEIEPLKPLNSSFYICD 124


>UniRef50_Q9NAX8 Cluster: Eukaryotic peptide chain release factor
           subunit 1; n=6; Trypanosomatidae|Rep: Eukaryotic peptide
           chain release factor subunit 1 - Trypanosoma brucei
           brucei
          Length = 452

 Score =  155 bits (376), Expect = 1e-36
 Identities = 71/125 (56%), Positives = 97/125 (77%)
 Frame = +2

Query: 350 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 529
           E S +++ +E +K+KKLI+ LE ARG GTS+IS+ + PK+QIS +   L +E+GTASNIK
Sbjct: 5   ELSESEKAIERYKVKKLIQMLESARGMGTSVISIYMTPKEQISGMVTKLNNEYGTASNIK 64

Query: 530 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 709
           S  N+LSV  AIT+   RLK Y ++PPNGL++YCGT++T E KEKK+ +D EPFKP++ S
Sbjct: 65  SHTNKLSVQSAITASLGRLKQYNRLPPNGLLLYCGTVLTAENKEKKLTLDIEPFKPVSRS 124

Query: 710 LYLCD 724
           LYLCD
Sbjct: 125 LYLCD 129


>UniRef50_Q9NCP1 Cluster: Eukaryotic peptide chain release factor
           subunit 1; n=2; Giardia intestinalis|Rep: Eukaryotic
           peptide chain release factor subunit 1 - Giardia lamblia
           (Giardia intestinalis)
          Length = 457

 Score =  152 bits (368), Expect = 1e-35
 Identities = 69/120 (57%), Positives = 93/120 (77%)
 Frame = +2

Query: 365 DRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNR 544
           +R + IW++K+ I+ LE   G+GTS+ISL+IPP +Q+S V+ ML +E+GTASNIKSRVN+
Sbjct: 15  ERQIAIWQLKRTIEKLESYTGSGTSVISLLIPPGEQLSSVTGMLTNEYGTASNIKSRVNK 74

Query: 545 LSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 724
            +VL AITS   RLKLY ++PPNGL +YCG I  E+GK  KV ID+ P+KPI+  +YLCD
Sbjct: 75  NAVLSAITSAMSRLKLYNRLPPNGLAVYCGEI-EEDGKNTKVVIDYTPYKPISNFIYLCD 133


>UniRef50_A2EPZ2 Cluster: Eukaryotic release factor 1, putative;
           n=2; Trichomonas vaginalis|Rep: Eukaryotic release
           factor 1, putative - Trichomonas vaginalis G3
          Length = 438

 Score =  143 bits (346), Expect = 5e-33
 Identities = 65/117 (55%), Positives = 89/117 (76%)
 Frame = +2

Query: 374 VEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSV 553
           +E++KIK+LI  L  A G+GTSM++++IPP D + R+ + L DE GTASNIK+RVNR SV
Sbjct: 14  IELFKIKRLINYLRDAHGDGTSMVTILIPPGDAVHRMRQKLTDELGTASNIKNRVNRQSV 73

Query: 554 LGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 724
             AIT+   +L  +   PPNGL ++CGTI+ EEGKEKK+  DFEPF+P++ SLY+CD
Sbjct: 74  EAAITAAIQKLGQFNSTPPNGLCVFCGTII-EEGKEKKLMKDFEPFRPLHQSLYICD 129


>UniRef50_Q5CD84 Cluster: Eukaryotic peptide chain release factor
           subunit 1; n=5; Eukaryota|Rep: Eukaryotic peptide chain
           release factor subunit 1 - Loxodes striatus
          Length = 436

 Score =  122 bits (295), Expect = 7e-27
 Identities = 56/115 (48%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = +2

Query: 383 WKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGA 562
           WKI++LI+ LE A+GNGTS+ISLIIPPK+QIS +++ L D  G A NIKS+  + +V  A
Sbjct: 12  WKIRRLIEYLEKAKGNGTSLISLIIPPKEQISLINQKLTDAHGRAQNIKSKAVQKAVQDA 71

Query: 563 ITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGK-EKKVNIDFEPFKPINTSLYLCD 724
           I S + +L +  ++PPNGL++YCG  + E+ K EK++    EP + INT+ +LC+
Sbjct: 72  IISTKQKLSVIKQIPPNGLILYCGKFIGEDEKTEKQILEVLEPLRAINTTFFLCE 126


>UniRef50_Q965E7 Cluster: Eukaryotic polypeptide chain release
           factor 1; n=3; Paramecium tetraurelia|Rep: Eukaryotic
           polypeptide chain release factor 1 - Paramecium
           tetraurelia
          Length = 437

 Score =  111 bits (267), Expect = 2e-23
 Identities = 53/124 (42%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
 Frame = +2

Query: 356 SSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSR 535
           + A+  +E +++KKLIK+L   R  GTS++S+ IPPK  IS ++  L  ++  A++IK +
Sbjct: 6   NDAEIALEQFRLKKLIKTLSQERTAGTSVVSVYIPPKRIISDITNRLNTQYAEAASIKDK 65

Query: 536 VNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGK-EKKVNIDFEPFKPINTSL 712
            NR+SV  AI +   RL+ Y K P NGLV++CG +   +GK EKK+++  EP++P++ SL
Sbjct: 66  GNRISVQEAIQAAILRLRPYNKAPNNGLVVFCGIVQQADGKGEKKISVVIEPYRPLDLSL 125

Query: 713 YLCD 724
           Y CD
Sbjct: 126 YFCD 129


>UniRef50_P58227 Cluster: Peptide chain release factor subunit 1;
           n=5; Thermoplasmatales|Rep: Peptide chain release factor
           subunit 1 - Thermoplasma volcanium
          Length = 418

 Score =  103 bits (248), Expect = 3e-21
 Identities = 52/120 (43%), Positives = 70/120 (58%)
 Frame = +2

Query: 365 DRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNR 544
           D  +  ++ K+ ++ L    G GT +ISL IPP+ QIS V   L DE+ T+SNIKS+  R
Sbjct: 7   DEQIRRYEFKRALEELSKLHGRGTELISLYIPPEKQISDVVAYLRDEYSTSSNIKSKSTR 66

Query: 545 LSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 724
            +VL AI S+  RLK Y   PPNGLV + G I T   + +      EP +PI T +Y CD
Sbjct: 67  KNVLAAIESIMSRLKYYRFPPPNGLVFFVGHIATRGDQTEMYTKIIEPPEPITTFMYKCD 126


>UniRef50_Q8U0J4 Cluster: Peptide chain release factor subunit 1;
           n=5; Archaea|Rep: Peptide chain release factor subunit 1
           - Pyrococcus furiosus
          Length = 420

 Score = 95.9 bits (228), Expect = 9e-19
 Identities = 47/119 (39%), Positives = 69/119 (57%)
 Frame = +2

Query: 368 RNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRL 547
           R+ +++++KK I  L+  RG GT +ISL IP    +S+V + L +E+ TA NIKS+  R 
Sbjct: 7   RDAQLYELKKKIDELKKIRGRGTELISLYIPAGYDLSKVMQQLREEYSTAQNIKSKTTRK 66

Query: 548 SVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 724
           +VLGA+      LKLY + P NGL ++ G +   EG          P +P+N  LY CD
Sbjct: 67  NVLGALERAMQHLKLYKQTPENGLALFVGNVSEMEGVTDIRLWAIIPPEPLNVRLYRCD 125


>UniRef50_A7DMG3 Cluster: ERF1 domain 2 protein; n=1; Candidatus
           Nitrosopumilus maritimus SCM1|Rep: ERF1 domain 2 protein
           - Candidatus Nitrosopumilus maritimus SCM1
          Length = 426

 Score = 89.8 bits (213), Expect = 6e-17
 Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
 Frame = +2

Query: 371 NVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLS 550
           +V+++KI+K ++ L    G GT +I++ IP   Q+  +   L  E GTA NIKS + R  
Sbjct: 11  SVKVYKIRKTLEELSKKSGRGTELITVYIPKGKQLHEIIGTLQQEQGTADNIKSDLTRSH 70

Query: 551 VLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEG---KEKKVNI-DFEPFKPINTSLYL 718
           V+ ++  V  RLKLY K P  GLV++CG +  EEG     + V + + +P K +N  LY 
Sbjct: 71  VVDSLGKVVQRLKLYKKTPERGLVMFCGALPPEEGGPLGSEVVKVWEIDPPKDLNQYLYR 130

Query: 719 CD 724
           CD
Sbjct: 131 CD 132


>UniRef50_A0RX46 Cluster: Peptide chain release factor 1; n=2;
           Crenarchaeota|Rep: Peptide chain release factor 1 -
           Cenarchaeum symbiosum
          Length = 411

 Score = 89.4 bits (212), Expect = 8e-17
 Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
 Frame = +2

Query: 380 IWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLG 559
           ++KI+K++  L    G GT +IS+ IP   Q+  +  +L +E GTA NIKS + R  V+ 
Sbjct: 1   MYKIRKMLDELSGISGRGTELISVYIPKGKQLHEIISVLKEEQGTADNIKSDLTRTHVVD 60

Query: 560 AITSVQHRLKLYTKVPPNGLVIYCGTIVTE----EGKEKKVNIDFEPFKPINTSLYLCD 724
           ++  V  RL+LY K P  GLVI+CG +  E     G E     + +P K + T LY CD
Sbjct: 61  SLAKVVQRLRLYKKTPERGLVIFCGALPPEGGGPTGSETVRAFEIDPPKELRTFLYRCD 119


>UniRef50_Q58239 Cluster: Peptide chain release factor subunit 1;
           n=12; Euryarchaeota|Rep: Peptide chain release factor
           subunit 1 - Methanococcus jannaschii
          Length = 421

 Score = 85.0 bits (201), Expect = 2e-15
 Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
 Frame = +2

Query: 377 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVL 556
           +++  KK++K L+  +G GT +ISL IP   +IS V++ L +E   ASNIKS+  R +V 
Sbjct: 8   QLYLFKKMLKELKSKKGKGTELISLYIPAGRRISDVAQHLREEMSQASNIKSKSTRKNVQ 67

Query: 557 GAITSVQHRLKLYTKVPPNGLVIYCGTIV-TEEGKEKKVNIDFEPFKPINTSLYLCD 724
            AI ++  RLKL  +    G+VI+ G +  +  G EK      EP +PI T +Y CD
Sbjct: 68  SAIEAILQRLKLLKEPLEKGVVIFAGMVPRSGPGTEKMETYVIEPPEPIKTYIYRCD 124


>UniRef50_Q9HNF0 Cluster: Peptide chain release factor subunit 1;
           n=7; Euryarchaeota|Rep: Peptide chain release factor
           subunit 1 - Halobacterium salinarium (Halobacterium
           halobium)
          Length = 416

 Score = 83.0 bits (196), Expect = 7e-15
 Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
 Frame = +2

Query: 338 NKMSEESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTA 517
           ++  E  S DR    ++ +K+I+ L+   G+GT ++++ IPP  QIS V   +  E   A
Sbjct: 2   SEQDEVPSEDRRK--YEFRKVIEELKDYEGSGTQLVTIYIPPDKQISDVVAHVTQEHSEA 59

Query: 518 SNIKSRVNRLSVLGAITSVQHRLKLYTKVPP-NGLVIYCGTIVTEEGKEKKVNIDFE-PF 691
           SNIKS+  R +V  A+TS++ RL+ Y   PP NG+V++ G + +  G+   V    E P 
Sbjct: 60  SNIKSKQTRTNVQDALTSIKDRLRYYDTFPPDNGMVVFSGAVDSGGGRTDMVTEVLESPP 119

Query: 692 KPINTSLYLCD 724
           +PI +  Y CD
Sbjct: 120 QPIESFRYHCD 130


>UniRef50_Q8TS00 Cluster: Peptide chain release factor subunit 1-2;
           n=9; Euryarchaeota|Rep: Peptide chain release factor
           subunit 1-2 - Methanosarcina acetivorans
          Length = 415

 Score = 79.8 bits (188), Expect = 6e-14
 Identities = 44/116 (37%), Positives = 67/116 (57%)
 Frame = +2

Query: 377 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVL 556
           E +  KK +++L+   G  T +ISL IPP  QIS V+K L +E   ASNI S++ R +V 
Sbjct: 8   EKYVFKKQLETLKSKNGRSTELISLYIPPDKQISDVTKHLREEHEQASNIISKLIRNNVQ 67

Query: 557 GAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 724
            A+ S+  +L+   K+P NG+V + GT+ T   +   VN    P +P+   +Y CD
Sbjct: 68  EALHSLLAKLRSLHKIPENGIVYFTGTVDTGANRTGMVNEVLFPPEPVADYIYRCD 123


>UniRef50_Q74N59 Cluster: NEQ052; n=1; Nanoarchaeum equitans|Rep:
           NEQ052 - Nanoarchaeum equitans
          Length = 358

 Score = 77.4 bits (182), Expect = 3e-13
 Identities = 41/116 (35%), Positives = 63/116 (54%)
 Frame = +2

Query: 377 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVL 556
           E +K+K L++ L+   G GT ++SL IP    I ++   L  E+ TA+NIK    R +V 
Sbjct: 5   EKYKLKSLLRQLKSIEGRGTELVSLYIPSNYPIGKILDQLNYEYATAANIKDDTTRKNVQ 64

Query: 557 GAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 724
            A+  + + LK + K+P NGLVI+ G I     ++ ++     P K  N  LY CD
Sbjct: 65  AALAKIINYLKDFKKIPENGLVIFAGNIAGRGDQDVRLWAIVPPEKS-NLKLYRCD 119


>UniRef50_Q46FF0 Cluster: Peptide chain release factor, subunit 1;
           n=2; Methanosarcinaceae|Rep: Peptide chain release
           factor, subunit 1 - Methanosarcina barkeri (strain
           Fusaro / DSM 804)
          Length = 415

 Score = 72.9 bits (171), Expect = 7e-12
 Identities = 41/116 (35%), Positives = 62/116 (53%)
 Frame = +2

Query: 377 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVL 556
           E +  KK +++L    G  T +ISL IP   QIS V+  L +E   AS IKS++   +V 
Sbjct: 8   EKYVFKKKLETLRNKNGKSTELISLYIPSDKQISDVTNHLREEHEQASKIKSKLTSNNVQ 67

Query: 557 GAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 724
           GA+ S+  +L+   K+P NG+V + G I T   +   V     P +P+   +Y CD
Sbjct: 68  GALDSLLAKLRSLNKIPENGIVYFTGVIDTGANRTGMVTEVLIPPEPVVDYIYHCD 123


>UniRef50_Q9YAF1 Cluster: Peptide chain release factor subunit 1;
           n=9; Thermoprotei|Rep: Peptide chain release factor
           subunit 1 - Aeropyrum pernix
          Length = 373

 Score = 66.5 bits (155), Expect = 6e-10
 Identities = 38/113 (33%), Positives = 61/113 (53%)
 Frame = +2

Query: 386 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAI 565
           ++ +L+K L+      T ++SL IPP   +S V  +L  E+    NIK +  R +V  A+
Sbjct: 16  ELARLLKELKKWSAPATVLLSLYIPPGRPLSDVMTLLRQEYSITDNIKLKRTRQAVKRAL 75

Query: 566 TSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 724
           ++   RL++ T  PPNGLV++CG  ++  GK +     F P +PI    Y  D
Sbjct: 76  SAAMDRLQMLTSTPPNGLVLFCGEDMS-TGKFE--CFMFSPPEPIRVFYYRTD 125


>UniRef50_Q8ZU81 Cluster: Peptide chain release factor subunit 1;
           n=5; Thermoproteaceae|Rep: Peptide chain release factor
           subunit 1 - Pyrobaculum aerophilum
          Length = 388

 Score = 65.7 bits (153), Expect = 1e-09
 Identities = 34/113 (30%), Positives = 59/113 (52%)
 Frame = +2

Query: 386 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAI 565
           +++  +  L+  +G  T++I+L I  +  I  V  +L  E+ TA+NIK +  R  V   +
Sbjct: 18  ELRAFVNLLKKFKGYATTLITLYINAERPIPDVVNLLRSEWSTAANIKDKTTRTHVQDTL 77

Query: 566 TSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 724
             + + LK   K P NG+ ++ G  +  +G  + V     P +PINT  Y+CD
Sbjct: 78  ERIINNLKGEAKAPENGMAVFAGFHMINQGNYEWVYYVVIPPQPINTFKYICD 130


>UniRef50_Q3UUT4 Cluster: 16 days neonate thymus cDNA, RIKEN
           full-length enriched library, clone:A130075O06
           product:hypothetical protein, full insert sequence; n=1;
           Mus musculus|Rep: 16 days neonate thymus cDNA, RIKEN
           full-length enriched library, clone:A130075O06
           product:hypothetical protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 103

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 659 EKKVNIDFEPFKPINTSLYLCD 724
           +KK  +DFEPFKP++TSL + D
Sbjct: 28  KKKARVDFEPFKPMSTSLRVAD 49


>UniRef50_A0CCA2 Cluster: Chromosome undetermined scaffold_167,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_167,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 243

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 21/62 (33%), Positives = 26/62 (41%)
 Frame = -1

Query: 382 YFDISIGRRFFRHFVSLFI*LINHKHYICINN*NNVFAQHQNFK*TNTMEREPEFQFQTA 203
           Y  I   R   + FVS+F  LI   H  C N+ NN F Q Q +  +       E  F   
Sbjct: 54  YVTIPCARSLSQIFVSVFFNLIYLFHIFCNNSINNYFQQMQYYYFSQYFRSHSEMHFNNL 113

Query: 202 LI 197
           LI
Sbjct: 114 LI 115


>UniRef50_UPI00006CC094 Cluster: hypothetical protein
           TTHERM_00215930; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00215930 - Tetrahymena
           thermophila SB210
          Length = 905

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +2

Query: 386 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEF 508
           K++ LI+ L     NGT+ +SL I  K Q +++S+ L DEF
Sbjct: 182 KVEYLIEQLLEGSNNGTNTLSLKILQKQQANQLSQDLKDEF 222


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,898,591
Number of Sequences: 1657284
Number of extensions: 13827925
Number of successful extensions: 34303
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 33200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34291
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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