Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a21
         (616 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4H615 Cluster: Putative uncharacterized protein; n=2; ...    35   1.8  
UniRef50_A5KCH3 Cluster: Pseudouridylate synthase 1, putative; n...    33   5.4  
UniRef50_Q00S21 Cluster: Chromosome 19 contig 1, DNA sequence; n...    33   7.1  
UniRef50_Q19ZR8 Cluster: Gp99; n=1; Mycobacterium phage Llij|Rep...    32   9.4  

>UniRef50_A4H615 Cluster: Putative uncharacterized protein; n=2;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania braziliensis
          Length = 2085

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
 Frame = +3

Query: 327 IQTIIVITSITYCSMCLATSVHSIL*TMFEQIAFLPTWFLM-------AWLG 461
           I  + + +S+TY  +C+  +  ++L  M E + FLPT++L+       AWLG
Sbjct: 150 ISAMSISSSVTYALLCVYYACRTVLLFMVETVLFLPTYYLVERHDTPSAWLG 201


>UniRef50_A5KCH3 Cluster: Pseudouridylate synthase 1, putative; n=1;
           Plasmodium vivax|Rep: Pseudouridylate synthase 1,
           putative - Plasmodium vivax
          Length = 587

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = -3

Query: 287 DQRAITNATSSTSIPRFYLVVSIVPHTSNLKKSTMCLS*HCFHFPYDVSC*KAS--SKGC 114
           D+ A  +AT++ + P      ++   T   KK    L+    H P D+ C      +K  
Sbjct: 158 DEAAAQSATTNEATPHS---AALAERTKKEKKFRQLLN---EHLPEDIRCFDMHRVTKSF 211

Query: 113 SQRLACYFSVYFYSYPFCIFSKLLSR 36
             R  C F +Y Y +P C+ S++  R
Sbjct: 212 DARKFCSFRLYEYLFPVCVLSEVAVR 237


>UniRef50_Q00S21 Cluster: Chromosome 19 contig 1, DNA sequence; n=1;
           Ostreococcus tauri|Rep: Chromosome 19 contig 1, DNA
           sequence - Ostreococcus tauri
          Length = 2065

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 213 WDYRNNQIKTRNTCG*CGVRNCTLIEALVNGEAAATNKIQTIIVITSITYCSMC 374
           + Y N Q+        C  ++  LIE +V+   +A N++ + +   SITYCS C
Sbjct: 378 YTYSNAQLFNLTIKAPCAAKSSGLIETVVS---SAINRVSSSVNYDSITYCSRC 428


>UniRef50_Q19ZR8 Cluster: Gp99; n=1; Mycobacterium phage Llij|Rep:
           Gp99 - Mycobacterium phage Llij
          Length = 114

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 529 TRSGSCGRHTTKNTANGLKRTQTPSH 452
           T +G+C +HTT    NG +RT T +H
Sbjct: 17  TTTGTCPQHTTHRWGNGARRTTTAAH 42


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,839,332
Number of Sequences: 1657284
Number of extensions: 10242150
Number of successful extensions: 28122
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28108
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)