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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10a23
         (482 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka...   247   1e-64
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro...   229   3e-59
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag...   219   4e-56
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155...   211   5e-54
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro...   209   3e-53
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ...   197   9e-50
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn...   136   2e-31
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae...   134   1e-30
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar...   129   4e-29
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae...   128   9e-29
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph...   127   1e-28
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc...   115   6e-25
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc...   114   1e-24
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l...   109   3e-23
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop...   105   4e-22
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu...    60   2e-19
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc...    86   5e-16
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ...    52   7e-06
UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7; Mollicut...    48   8e-05
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts...    45   8e-04
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon...    44   0.002
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob...    44   0.002
UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15; Bacteri...    44   0.002
UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellula...    44   0.002
UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1...    43   0.003
UniRef50_Q2YIA3 Cluster: Ribosomal protein S8; n=20; Halimeda|Re...    42   0.006
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa...    42   0.006
UniRef50_A1USQ8 Cluster: 30S ribosomal protein S8; n=5; Bacteria...    42   0.010
UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1; Bdellovi...    40   0.022
UniRef50_Q8XV26 Cluster: 30S ribosomal protein S8; n=18; Proteob...    40   0.029
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;...    40   0.039
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j...    40   0.039
UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68; Bacteri...    40   0.039
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula...    39   0.068
UniRef50_Q0EW50 Cluster: Ribosomal protein S8; n=4; Proteobacter...    38   0.090
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n...    38   0.12 
UniRef50_Q9ZCR9 Cluster: 30S ribosomal protein S8; n=9; Ricketts...    37   0.21 
UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas d...    37   0.27 
UniRef50_Q2GEC5 Cluster: 30S ribosomal protein S8; n=1; Neoricke...    36   0.36 
UniRef50_A6GZ85 Cluster: 30S ribosomal protein S8; n=10; Bacteri...    36   0.36 
UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021; ...    36   0.48 
UniRef50_Q3S2A0 Cluster: Ribosomal protein S8; n=1; Thalassiosir...    35   0.84 
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n...    35   0.84 
UniRef50_Q9TAI6 Cluster: Ribosomal protein S8; n=1; Cafeteria ro...    34   1.5  
UniRef50_Q9HWE9 Cluster: 30S ribosomal protein S8; n=46; Bacteri...    34   1.5  
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen...    34   1.9  
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular...    34   1.9  
UniRef50_O21254 Cluster: Ribosomal protein S8; n=1; Reclinomonas...    33   2.6  
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ...    33   3.4  
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ...    33   3.4  
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ...    33   3.4  
UniRef50_Q7NEG6 Cluster: 30S ribosomal protein S8; n=165; Bacter...    32   5.9  
UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:...    32   7.8  
UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2; Aquifex|...    32   7.8  

>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
           Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
           (Human)
          Length = 130

 Score =  247 bits (604), Expect = 1e-64
 Identities = 115/130 (88%), Positives = 124/130 (95%), Gaps = 1/130 (0%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 237
           MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1   MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60

Query: 238 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 414
           IVVNLTGRLNKCGVISPRFDV + D+E+W  NLLPSRQFG++VLTTS GIMDHEEARRKH
Sbjct: 61  IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120

Query: 415 LGGKILGFFF 444
            GGKILGFFF
Sbjct: 121 TGGKILGFFF 130


>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
           protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
           protein - Mus musculus
          Length = 253

 Score =  229 bits (559), Expect = 3e-59
 Identities = 108/130 (83%), Positives = 118/130 (90%), Gaps = 1/130 (0%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 237
           MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183

Query: 238 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 414
           IVVNLTGRLNKCGVIS RFDV + D+++W  NLLP RQFG++VLTT  GI+DHEEARRKH
Sbjct: 184 IVVNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKH 243

Query: 415 LGGKILGFFF 444
            GGKILGFFF
Sbjct: 244 TGGKILGFFF 253


>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
           Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 130

 Score =  219 bits (534), Expect = 4e-56
 Identities = 101/130 (77%), Positives = 117/130 (90%), Gaps = 1/130 (0%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 237
           MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 238 IVVNLTGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRKH 414
           IVV L GRLNKCGVISPRFDV + +IE WT  LLPSRQFG++VLTTS GIMDHEEARRK+
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 415 LGGKILGFFF 444
           +GGK+LGFF+
Sbjct: 121 VGGKVLGFFY 130


>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
           n=33; Eukaryota|Rep: Uncharacterized protein
           ENSP00000348155 - Homo sapiens (Human)
          Length = 129

 Score =  211 bits (516), Expect = 5e-54
 Identities = 100/130 (76%), Positives = 114/130 (87%), Gaps = 1/130 (0%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 237
           MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTVM KHGYIGEFEI DDHRAGK
Sbjct: 1   MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTVM-KHGYIGEFEITDDHRAGK 59

Query: 238 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 414
           +VV LT RLNKCGVISPRF V + D+E+W  NLLPS QFG+++LTTS GI D EEARRKH
Sbjct: 60  MVVYLTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKH 119

Query: 415 LGGKILGFFF 444
            GGKILGFFF
Sbjct: 120 TGGKILGFFF 129


>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
           protein; n=3; Mus musculus|Rep: PREDICTED: similar to
           Rps15a protein - Mus musculus
          Length = 239

 Score =  209 bits (510), Expect = 3e-53
 Identities = 98/131 (74%), Positives = 112/131 (85%), Gaps = 1/131 (0%)
 Frame = +1

Query: 52  LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 231
           + MV MNVL DALKS ++AEK GKRQ  IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97  VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156

Query: 232 GKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 408
           GK+VVNLTGRLNKCGVISPRFDV + D+E+W  NLLP+RQFG++VLTT  GIMD EE R+
Sbjct: 157 GKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216

Query: 409 KHLGGKILGFF 441
           KH GG+ILGFF
Sbjct: 217 KHTGGEILGFF 227


>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
           protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
           similar to ribosomal protein S15a - Macaca mulatta
          Length = 345

 Score =  197 bits (481), Expect = 9e-50
 Identities = 93/117 (79%), Positives = 104/117 (88%), Gaps = 1/117 (0%)
 Frame = +1

Query: 79  SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 258
           SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233

Query: 259 RLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 426
           RLNKCGVI+ RFDV   D+E+W  NL PS QFG++VLTTS GIMDHEEAR+KH G +
Sbjct: 234 RLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290


>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
           Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 129

 Score =  136 bits (330), Expect = 2e-31
 Identities = 61/125 (48%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = +1

Query: 73  VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 252
           +L+DAL++I NAE+RGK  V ++P S V+  FL +M + GYI  F++ D HR G+I V+L
Sbjct: 5   ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64

Query: 253 TGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKI 429
            GR+N C  ++ R DV   +IE++T   LP+RQ+GY+V+TT  GI+DHEEA ++++GG++
Sbjct: 65  QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQV 124

Query: 430 LGFFF 444
           LGFF+
Sbjct: 125 LGFFY 129


>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
           Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
           furiosus
          Length = 130

 Score =  134 bits (323), Expect = 1e-30
 Identities = 61/130 (46%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 237
           M  ++ L++AL  I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG 
Sbjct: 1   MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60

Query: 238 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 414
             V L GR+NK G I PRF V +++ E+W    LP+ +FG L+++TS G+M H+EA  K 
Sbjct: 61  YRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKG 120

Query: 415 LGGKILGFFF 444
           +GG+++ + +
Sbjct: 121 IGGRLIAYVY 130


>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
           Euryarchaeota|Rep: 30S ribosomal protein S8P -
           Methanosarcina mazei (Methanosarcina frisia)
          Length = 130

 Score =  129 bits (311), Expect = 4e-29
 Identities = 62/130 (47%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 237
           MV ++ L++AL +I NAE  GK   ++RP SK I   L VM   GYIG+FE +DD +AG 
Sbjct: 1   MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60

Query: 238 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 414
             V L GR+NKCG I PR+ V     ERW    LP++ FG L+LTTS G+M   EAR K 
Sbjct: 61  YSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKK 120

Query: 415 LGGKILGFFF 444
           +GG++L + +
Sbjct: 121 IGGQLLAYVY 130


>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
           Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
           acidocaldarius
          Length = 133

 Score =  128 bits (308), Expect = 9e-29
 Identities = 60/133 (45%), Positives = 88/133 (66%), Gaps = 4/133 (3%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 237
           M  +N L++AL +++N E R  +Q LI P SK+I+  L VM K GYIGEFE +DD RAGK
Sbjct: 1   MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60

Query: 238 IVVNLTGRLNKCGVISPRFDVPINDIERWTN----LLPSRQFGYLVLTTSGGIMDHEEAR 405
           I+V L GR+NKCG ISPR+ +  N + R  +     LPS++ G ++++T  G+M H +  
Sbjct: 61  IIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGI 120

Query: 406 RKHLGGKILGFFF 444
           R+ +GG  LG+ +
Sbjct: 121 REKIGGVTLGYVY 133


>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
           Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
           - Encephalitozoon cuniculi
          Length = 128

 Score =  127 bits (307), Expect = 1e-28
 Identities = 58/124 (46%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 255
           L++  K+I+NA + GKRQ+L+R  ++ +  FL  M++HGYI  F  + D R+GK +++L 
Sbjct: 5   LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64

Query: 256 GRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 432
           GRLN+CG ISP + V  + IE + T LLP+RQFG+++  TS GI+DH+E   +++GGKIL
Sbjct: 65  GRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKECLTENVGGKIL 124

Query: 433 GFFF 444
           G+F+
Sbjct: 125 GYFY 128


>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
           Euryarchaeota|Rep: 30S ribosomal protein S8P -
           Picrophilus torridus
          Length = 129

 Score =  115 bits (276), Expect = 6e-25
 Identities = 53/124 (42%), Positives = 82/124 (66%), Gaps = 1/124 (0%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 255
           L+D + +I NA + GK +V+I P S +I + L VM  + YI  FE++++ R GK  V L+
Sbjct: 6   LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELS 65

Query: 256 GRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 432
             +N CGVI PR  V  ++IER+ +  LP++ FG ++LTT+ GIM H EAR+  +GGK+L
Sbjct: 66  DTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLL 125

Query: 433 GFFF 444
            + +
Sbjct: 126 AYVY 129


>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
           Euryarchaeota|Rep: 30S ribosomal protein S8P -
           Archaeoglobus fulgidus
          Length = 129

 Score =  114 bits (274), Expect = 1e-24
 Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 1/127 (0%)
 Frame = +1

Query: 67  MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 246
           ++ LS+A+ +I NAE  G+++  I+P SK+I   L VM  +GYI  FE V++HR GK +V
Sbjct: 3   VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62

Query: 247 NLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGG 423
            L+G +N CG I PRF   + + E +    LP+R FG L+++T+ G+M  ++AR++ LGG
Sbjct: 63  ELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGG 122

Query: 424 KILGFFF 444
            +L + +
Sbjct: 123 VLLAYVY 129


>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
           lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
           Halorubrum lacusprofundi ATCC 49239
          Length = 147

 Score =  109 bits (262), Expect = 3e-23
 Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
 Frame = +1

Query: 52  LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 231
           L M   +  ++AL  + NAE  G     + P S +I   L V+   GY+  FE VDD +A
Sbjct: 16  LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75

Query: 232 GKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 408
           GK  V L G +N+CG + PR+    ++ E+W    LP+R +G L++TTS G+M H EAR 
Sbjct: 76  GKFEVELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEARE 135

Query: 409 KHLGGKILGFFF 444
           + +GG+++ + +
Sbjct: 136 EGIGGQVIAYVY 147


>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
           Thermoprotei|Rep: 30S ribosomal protein S8P -
           Cenarchaeum symbiosum
          Length = 130

 Score =  105 bits (253), Expect = 4e-22
 Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 237
           M   N+L++   +++N E R +    + P SK+ V+ L  + K GYIGEFE V+D R GK
Sbjct: 1   MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60

Query: 238 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKH 414
             V+L  ++ KCG ISPRF V   +   W    LPS   G LV+TT+ G+M H EA  + 
Sbjct: 61  FSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERG 120

Query: 415 LGGKILGFFF 444
           +GG ++G+ +
Sbjct: 121 IGGFLIGYVY 130


>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
           tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
          Length = 144

 Score = 60.1 bits (139), Expect(2) = 2e-19
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = +1

Query: 190 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 282
           GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137



 Score = 57.2 bits (132), Expect(2) = 2e-19
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = +1

Query: 52  LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 189
           ++ V +  +    +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31  VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76


>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
           Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
           Nanoarchaeum equitans
          Length = 129

 Score = 85.8 bits (203), Expect = 5e-16
 Identities = 37/126 (29%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
 Frame = +1

Query: 70  NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 249
           ++++D L  + N  ++G+ +    P S +I+K + +M + GYI  + +VD  R   I + 
Sbjct: 4   DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63

Query: 250 LTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 426
           L+   N+   I PRF V  +++E++    LP+  FG L+L+TS G++ + EA+ + +GG 
Sbjct: 64  LSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIGGV 123

Query: 427 ILGFFF 444
           ++ + +
Sbjct: 124 LIAYVY 129


>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
           protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
           similar to ribosomal protein S15a - Rattus norvegicus
          Length = 60

 Score = 52.0 bits (119), Expect = 7e-06
 Identities = 27/52 (51%), Positives = 35/52 (67%)
 Frame = +1

Query: 166 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 321
           F+TV MK    G+FEIVD+   G+I V+L G LNK GVI   FDV + D+E+
Sbjct: 3   FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51


>UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7;
           Mollicutes|Rep: 30S ribosomal protein S8 - Mycoplasma
           pneumoniae
          Length = 142

 Score = 48.4 bits (110), Expect = 8e-05
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 255
           ++D L  I+NA K  K   +    SK+ +  L +++K GY+  F+++++    K +V   
Sbjct: 15  VADLLTKINNARK-AKLMTVTTIASKLKIAILEILVKEGYLANFQVLENKSKTKRIVTFN 73

Query: 256 GRLNKCGVIS----PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEARRKHL 417
            +  +  + S     +   P   I R    LP      G  +++TS G+M  + AR K +
Sbjct: 74  LKYTQRRIPSINGVKQISKPGLRIYRPFEKLPLVLNGLGIAIISTSDGVMTDKVARLKKI 133

Query: 418 GGKILGF 438
           GG+IL +
Sbjct: 134 GGEILAY 140


>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
           Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
           phagocytophilum (strain HZ)
          Length = 133

 Score = 45.2 bits (102), Expect = 8e-04
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF-EIVDDHRAGKIVVNL 252
           ++D L  + N +  G  +V+  PCSKV++  L ++++ GYI  F E V      K++   
Sbjct: 7   IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESFTEEVRGDSGIKVLKVF 65

Query: 253 TGRLNKCGVISP--RFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEARRKHLG 420
               N    I    R   P   +    + +P      G  +++TS GIM    AR   +G
Sbjct: 66  LKYFNSAAAIRKIVRVSRPGKRVYSSADKMPRFYNALGIYIVSTSKGIMLDSHARNAGVG 125

Query: 421 GKIL 432
           G+IL
Sbjct: 126 GEIL 129


>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
           Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
           Wolinella succinogenes
          Length = 131

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 34/127 (26%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
 Frame = +1

Query: 70  NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 249
           ++++D+L  I NA  R      +   +K++V  L V +  G+I  ++++D  + GK  +N
Sbjct: 4   DIIADSLTRIRNAAMRRLDYTTLY-YAKIVVSILEVFLAKGFIESYKVID--KDGKQSIN 60

Query: 250 LTGRLNKCG--VISP--RFDVPINDIERWTNLLPSRQFGY--LVLTTSGGIMDHEEARRK 411
           +  + ++ G  VIS   R       + +  + L   + GY  +V++TS G++ +EEA + 
Sbjct: 61  VVLKYDEKGRSVISEIKRISKSGRRVYKGRDELKRFKNGYGTIVVSTSKGVIGNEEAYKA 120

Query: 412 HLGGKIL 432
           ++GG+ L
Sbjct: 121 NVGGEAL 127


>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
           Sphingobacteriales|Rep: 30S ribosomal protein S8 -
           Salinibacter ruber (strain DSM 13855)
          Length = 133

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 255
           +S+ +  + NA++  +  V I P SK+      ++++ GYI  F  +DD + G + V L 
Sbjct: 8   VSNYMAQLRNAQEAEQTYVDI-PASKLKRAMTQILLEKGYIKNFVNIDDEKQGLLRVYLK 66

Query: 256 -GRLNKCGV-ISPRFDVPINDIERWTNLLP--SRQFGYLVLTTSGGIMDHEEARRKHLGG 423
               ++  + +  R   P       ++ LP      G ++L+TS G+M  +EARR  +GG
Sbjct: 67  YDEYDQPAIRMLERVSRPGRREYADSDNLPEVKNGLGIVILSTSRGVMSDKEARRFGVGG 126

Query: 424 KILGFFF 444
           ++L   F
Sbjct: 127 EVLAKVF 133


>UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15;
           Bacteria|Rep: 30S ribosomal protein S8 - Bacteroides
           thetaiotaomicron
          Length = 131

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 255
           ++D L  + NA    K +V+  P S +  +   ++ + GYI  ++ V+D   G I V L 
Sbjct: 5   IADYLTRLRNAIG-AKHRVVEVPASNLKKEITKILFEKGYILNYKFVEDGPQGTIKVALK 63

Query: 256 -GRLNKCGVISPRFDVPINDIERWTNL--LPS--RQFGYLVLTTSGGIMDHEEARRKHLG 420
              +NK   I     V    + ++T    +P      G  +++TS G+M ++EA    +G
Sbjct: 64  YDSVNKVNAIKKLERVSSPGMRKYTGYKDMPRVINGLGIAIISTSKGVMTNKEAAELKIG 123

Query: 421 GKILGFFF 444
           G++L + +
Sbjct: 124 GEVLCYVY 131


>UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellular
           organisms|Rep: 30S ribosomal protein S8 - Bacillus
           anthracis
          Length = 132

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 237
           MV  + ++D L  I NA    + + L  P SK+  +   ++ + G+I + E ++D++ G 
Sbjct: 1   MVMTDPIADMLTRIRNANMV-RHEKLEVPASKIKKEIAELLKREGFIRDVEYIEDNKQGI 59

Query: 238 IVVNLTGRLNKCGVIS--PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEAR 405
           + + L    N   VI+   R   P   +    + +P      G  +++TS G+M  ++AR
Sbjct: 60  LRIFLKYGANNERVITGLKRISKPGLRVYAKADEVPRVLNGLGIALVSTSKGVMTDKDAR 119

Query: 406 RKHLGGKILGF 438
           +   GG+++ +
Sbjct: 120 QLQTGGEVVAY 130


>UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1;
           Acanthamoeba castellanii|Rep: Mitochondrial ribosomal
           protein S8 - Acanthamoeba castellanii (Amoeba)
          Length = 127

 Score = 43.2 bits (97), Expect = 0.003
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
 Frame = +1

Query: 67  MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV- 243
           M++LS+ +  +         QV+++  SK+ +  L+V+ K GYI  F I D      ++ 
Sbjct: 1   MSLLSNMISIVKVGYNARHLQVIVQN-SKLCINVLSVLYKLGYIRGFIIKDQKNITILLK 59

Query: 244 -VNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLG 420
            +N    +    VIS          ++    L  +  G+L+L+TS GI+  EE+    +G
Sbjct: 60  YINNKPAVRNIAVISTPGRRTYLKHKKLEKFLTKKDSGFLILSTSKGILTDEESNMFKIG 119

Query: 421 GKIL 432
           G+ L
Sbjct: 120 GEAL 123


>UniRef50_Q2YIA3 Cluster: Ribosomal protein S8; n=20; Halimeda|Rep:
           Ribosomal protein S8 - Halimeda opuntia
          Length = 133

 Score = 42.3 bits (95), Expect = 0.006
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHR--- 228
           MV  + +SD    I NA   G   V + P +      L +++ HG+I  F  +++     
Sbjct: 2   MVFNDSISDVFTRIRNANLVGHNTVRV-PLTLTTKSILNILVHHGFIKNFSQINNREFLV 60

Query: 229 --AGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGY-----LVLTTSGGIM 387
               K V+    RL++ G    R  V   ++ +   +L S Q G      + L+TS GI+
Sbjct: 61  TLKSKSVLRKLKRLSRPGC---RLYVSAQNLPQ---ILRSGQLGLAPRAIIFLSTSKGIL 114

Query: 388 DHEEARRKHLGGKILGF 438
              EAR   +GG+ILG+
Sbjct: 115 SDREARHLKVGGEILGY 131


>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
            Os01g0153200 protein - Oryza sativa subsp. japonica
            (Rice)
          Length = 1139

 Score = 42.3 bits (95), Expect = 0.006
 Identities = 18/34 (52%), Positives = 25/34 (73%)
 Frame = +1

Query: 214  VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 315
            VDDH++G+I++   GRLNK GVIS R DV +  +
Sbjct: 912  VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945


>UniRef50_A1USQ8 Cluster: 30S ribosomal protein S8; n=5;
           Bacteria|Rep: 30S ribosomal protein S8 - Bartonella
           bacilliformis (strain ATCC 35685 / KC583)
          Length = 132

 Score = 41.5 bits (93), Expect = 0.010
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 255
           L D L  I NA  R K +V + P SK+  + L V+   GYI  +  +D    GK    + 
Sbjct: 7   LGDMLTRIRNAISRKKSKV-VTPASKLRARVLDVLKLEGYICGYNQIDSGN-GKFEFEIE 64

Query: 256 GR-LNKCGVISP--RFDVPINDIERWTN--LLPSRQFGYLVLTTSGGIMDHEEARRKHLG 420
            +      VI    R   P   +   T   L  +   G  +L+T  G+M   EAR +++G
Sbjct: 65  LKYFENSSVIRTISRISKPGRRVYVSTKSILQVANGLGISILSTPKGVMTDHEAREQNVG 124

Query: 421 GKIL 432
           G++L
Sbjct: 125 GELL 128


>UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1;
           Bdellovibrio bacteriovorus|Rep: 30S ribosomal protein S8
           - Bdellovibrio bacteriovorus
          Length = 129

 Score = 40.3 bits (90), Expect = 0.022
 Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
 Frame = +1

Query: 67  MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 246
           M+ +S  L  I NA    K + +  P SKV      +++  G+I  F++  D + G + V
Sbjct: 1   MDTISQFLTMIRNAGA-AKHEKVDMPASKVRAGIAQILVNEGFIRSFKVAKDSKQGIMRV 59

Query: 247 NLTGRLNKCG--VIS--PRFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARR 408
            L  + ++ G   I+   R   P   +   ++ +P+ +   G  +++TS GIM  ++A  
Sbjct: 60  YL--KYDEAGGHAINNIDRVSRPGRRVYVKSDKIPTVRSGMGMSIISTSKGIMSGKQATE 117

Query: 409 KHLGGKIL 432
           + LGG++L
Sbjct: 118 QKLGGELL 125


>UniRef50_Q8XV26 Cluster: 30S ribosomal protein S8; n=18;
           Proteobacteria|Rep: 30S ribosomal protein S8 - Ralstonia
           solanacearum (Pseudomonas solanacearum)
          Length = 131

 Score = 39.9 bits (89), Expect = 0.029
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 255
           ++D L  I NA+   K  V++ P SK+ V    V+   GYI +F + +      + + L 
Sbjct: 7   IADMLTRIRNAQAVEKASVVM-PSSKLKVAIAKVLKDEGYIDDFAVTEQGGKASLTIGLK 65

Query: 256 GRLNKCGVIS-PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEARRKHLGGK 426
               +  +    R   P   + +  N +P      G  +++T  G+M    AR   +GG+
Sbjct: 66  YYAGRPVIERLERVSKPGLRVYKGRNEIPQVMNGLGVAIISTPQGLMTDRRARATGVGGE 125

Query: 427 IL 432
           ++
Sbjct: 126 VI 127


>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 116

 Score = 39.5 bits (88), Expect = 0.039
 Identities = 15/25 (60%), Positives = 22/25 (88%)
 Frame = +1

Query: 196 IGEFEIVDDHRAGKIVVNLTGRLNK 270
           IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9   IGKFEVIDDHRAGKIVENLSDKVTQ 33


>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
           japonica|Rep: Ribosome protein S8 - Griffithsia japonica
           (Red alga)
          Length = 142

 Score = 39.5 bits (88), Expect = 0.039
 Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDH-----RAGKI 240
           +SD    I N     K + +  P S+  +  +  ++   Y+ +F IV        +   I
Sbjct: 12  ISDLFTRIRNGYA-AKHESIYHPYSRFSLAIVKSLISQNYLRDFRIVPPESPRHPQFDHI 70

Query: 241 VVNLTGRLNKCGVISP--RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARR 408
            + L+  L     I    R  VP + + R    LP  +   G  +L+T  G+M   EAR+
Sbjct: 71  EIFLSYDLRGKPAIRALRRVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQ 130

Query: 409 KHLGGKILGFFF 444
           K LGG+++G  F
Sbjct: 131 KRLGGEVIGEVF 142


>UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68;
           Bacteria|Rep: 30S ribosomal protein S8 - Burkholderia
           mallei (Pseudomonas mallei)
          Length = 131

 Score = 39.5 bits (88), Expect = 0.039
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 255
           ++D L  I NA+   K  V + P SKV V    V+   GYI +F +  D    ++ + L 
Sbjct: 7   IADMLTRIRNAQMVEKVSVSM-PSSKVKVAIAQVLKDEGYIDDFAVKADGAKAELNIALK 65

Query: 256 GRLNKCGVIS--PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEARRKHLGG 423
               +  VI    R   P   + R  N +P      G  +++T  G+M   +AR   +GG
Sbjct: 66  YYAGR-PVIERLERVSKPGLRVYRGRNEIPQVMNGLGVAIVSTPKGVMTDRKARATGVGG 124

Query: 424 KIL 432
           +++
Sbjct: 125 EVI 127


>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
           organisms|Rep: 30S ribosomal protein S8 - Synechococcus
           sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
           bacteriumYellowstone B-Prime)
          Length = 136

 Score = 38.7 bits (86), Expect = 0.068
 Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
 Frame = +1

Query: 70  NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 249
           + ++D L  I NA       V + P +++      V+ + G++ E++   +    ++V+ 
Sbjct: 6   DTIADMLTRIRNATMARHESVAV-PATRMTRSIARVLHEEGFVSEWKEEGEGIQARVVLR 64

Query: 250 LT--GRLNKCGVIS---PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEARR 408
           L   G+   C  I     R   P   + R    LP      G  +++TS GIM   EAR+
Sbjct: 65  LKYKGKGRNCRPIINGLKRVSRPGLRVYRNHKELPRVLGGIGIAIISTSNGIMTDREARK 124

Query: 409 KHLGGKIL 432
           + +GG++L
Sbjct: 125 QGIGGEVL 132


>UniRef50_Q0EW50 Cluster: Ribosomal protein S8; n=4;
           Proteobacteria|Rep: Ribosomal protein S8 - Mariprofundus
           ferrooxydans PV-1
          Length = 131

 Score = 38.3 bits (85), Expect = 0.090
 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
 Frame = +1

Query: 67  MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDD--HRAGKI 240
           M+ ++D L  I NA+  G  ++ + P SK ++    ++   GY+G  +  +   HR  ++
Sbjct: 3   MDRIADMLTRIRNAQMAGIERIEM-PASKTLLAMAELLKDEGYLGAVKAYNHKGHRFLRV 61

Query: 241 VVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLV--LTTSGGIMDHEEARRKH 414
            +              R       +    + LP  + GY V  ++TS GIM  ++AR   
Sbjct: 62  TLRYDDEAKPIIREIKRISKSGRRVYVGADELPRVKNGYGVALISTSQGIMTDKKARSAQ 121

Query: 415 LGGKIL 432
           +GG++L
Sbjct: 122 VGGEVL 127


>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
           n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
           protein S8 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 134

 Score = 37.9 bits (84), Expect = 0.12
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
 Frame = +1

Query: 70  NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 249
           + ++D + SI NA+   K  V I   + +    + ++++ G+I       ++    +++ 
Sbjct: 4   DTIADIITSIRNADMNRKGTVRIGS-TNITESIVKILLREGFIENVRKHRENNQYFLILT 62

Query: 250 LTGRLNKCGVISP-----RFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEARR 408
           L  R NK           R   P   I   +  +P      G ++L+TS GIM   EAR 
Sbjct: 63  LRHRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARL 122

Query: 409 KHLGGKILGFFF 444
           K +GG+IL + +
Sbjct: 123 KRIGGEILCYIW 134


>UniRef50_Q9ZCR9 Cluster: 30S ribosomal protein S8; n=9;
           Rickettsia|Rep: 30S ribosomal protein S8 - Rickettsia
           prowazekii
          Length = 132

 Score = 37.1 bits (82), Expect = 0.21
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 9/128 (7%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL- 252
           ++D L  I NA K     V   P SK+    L V+ K GYI ++     +      V L 
Sbjct: 7   VADMLTRIRNAYKSKLINVSF-PSSKIKTSILDVLQKEGYIKDYVTTQKNNISYTEVALK 65

Query: 253 ---TGRLNKCGV--ISP---RFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARR 408
               G  + C +  +S    R    I D++ + N       G  +L+T  G+M   EA  
Sbjct: 66  YSVNGEASICEIHRVSKPGKRVYSAIKDLKGYYN-----NMGIYILSTPYGVMSDREAHI 120

Query: 409 KHLGGKIL 432
           K++GG+++
Sbjct: 121 KNVGGEVI 128


>UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas
           danica|Rep: Ribosomal protein S8 - Ochromonas danica
          Length = 128

 Score = 36.7 bits (81), Expect = 0.27
 Identities = 38/122 (31%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 255
           L D L S+ NA    K  V I+  S++I K+L ++ K G I  F    D      +VNL 
Sbjct: 5   LIDFLLSLKNASLAKKDFVKIKE-SRLISKYLPILYKEGIIQSFFKKQDSCNSFYIVNLR 63

Query: 256 GRLNKCGVISPR-FDVP--INDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 426
              NK      +    P  I  I R   +    +   L+L+T  GIM H  + R   GG 
Sbjct: 64  HFQNKVVTQDIQLISTPSKIKKISRKELISLHLKNKMLILSTPKGIMSHINSIRHKAGGF 123

Query: 427 IL 432
           I+
Sbjct: 124 II 125


>UniRef50_Q2GEC5 Cluster: 30S ribosomal protein S8; n=1;
           Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
           protein S8 - Neorickettsia sennetsu (strain Miyayama)
          Length = 131

 Score = 36.3 bits (80), Expect = 0.36
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
 Frame = +1

Query: 70  NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK-IVV 246
           ++++DA+  I N +    R+V I   S+V+V+   ++ + GYI  +E+++   + K I++
Sbjct: 4   SLIADAVARIRNGQMARLREVTIYH-SRVLVEIAALLKEEGYIVGYEVIEIRPSVKRIII 62

Query: 247 NLTGRLNKCG--VISPR--FDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARR 408
            L      CG  VIS    F  P   I      +P      G  VL+TS GI+   +A  
Sbjct: 63  RLK---YYCGQPVISKLKLFSRPGKRIYSRACEIPKFYGGLGISVLSTSKGILPSYKAVS 119

Query: 409 KHLGGKIL 432
            + GG++L
Sbjct: 120 SNCGGELL 127


>UniRef50_A6GZ85 Cluster: 30S ribosomal protein S8; n=10;
           Bacteria|Rep: 30S ribosomal protein S8 - Flavobacterium
           psychrophilum (strain JIP02/86 / ATCC 49511)
          Length = 132

 Score = 36.3 bits (80), Expect = 0.36
 Identities = 28/128 (21%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
 Frame = +1

Query: 76  LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 255
           ++D L  + NA K   + V I P S +  +   ++   GYI  ++  D+   G I + L 
Sbjct: 6   IADYLTRVRNAAKANHKVVEI-PASNMKKEITKILFDQGYILSYKFEDNAVQGSIKIALK 64

Query: 256 -GRLNKCGVISPRFDVPINDIERWT--NLLPS--RQFGYLVLTTSGGIMDHEEARRKHLG 420
             ++ K  VI     +    + +++  + +P      G  +++TS G+M  + A++ ++G
Sbjct: 65  YDKVTKESVIRDIQRISKPGLRKYSGSSTIPRILNGLGIAIVSTSKGLMTGKLAKQLNVG 124

Query: 421 GKILGFFF 444
           G+++ + +
Sbjct: 125 GEVICYVY 132


>UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 90.t00021 - Entamoeba histolytica HM-1:IMSS
          Length = 627

 Score = 35.9 bits (79), Expect = 0.48
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +1

Query: 223 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 375
           H  G I ++L  RLN+ GV+   +   + +I  +  LL    FGYL +T+S
Sbjct: 192 HEIGNIHISLLNRLNQIGVVIGIYSNMLEEIPEYVTLL--HHFGYLTITSS 240


>UniRef50_Q3S2A0 Cluster: Ribosomal protein S8; n=1; Thalassiosira
           pseudonana|Rep: Ribosomal protein S8 - Thalassiosira
           pseudonana (Marine diatom)
          Length = 128

 Score = 35.1 bits (77), Expect = 0.84
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
 Frame = +1

Query: 121 KRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVD-DHRAGKIVV---NLTGRLNKCGVIS- 285
           +R  + +  +K+I+ FL ++   G+I  ++I   D    KI +   N    +N    IS 
Sbjct: 19  RRNFMYQQKTKLIIAFLDILWDEGFILGYKIYSADSNILKIFLKYKNGNPVINSVKPISK 78

Query: 286 PRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 432
           P   +  +  + W   L S++   ++LTTS G+M   E +R  +GGK L
Sbjct: 79  PSQQIYYSVSQLWK--LDSKK-NLIILTTSKGLMTVNECKRAQIGGKPL 124


>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
           Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
           protein S8 - Stigeoclonium helveticum (Green alga)
          Length = 176

 Score = 35.1 bits (77), Expect = 0.84
 Identities = 20/48 (41%), Positives = 28/48 (58%)
 Frame = +1

Query: 70  NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 213
           + +SD L  I NA    K+ VLI P +K+ +K   ++ K GYI  FEI
Sbjct: 4   DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50


>UniRef50_Q9TAI6 Cluster: Ribosomal protein S8; n=1; Cafeteria
           roenbergensis|Rep: Ribosomal protein S8 - Cafeteria
           roenbergensis
          Length = 131

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
 Frame = +1

Query: 67  MNVLSDALKSIHNAEKRGKRQVLIR-PCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV 243
           M +L+  +  I  A+K G + + I    S +   FL +++K G+I  F  +   R    V
Sbjct: 1   MILLNHLITVIKLAKKSGNKNIFIGIKASFLCYDFLRILLKQGFIKNFREIKQKRKEGYV 60

Query: 244 VNLTGRLNKCGVISPRFDVPINDIERWTNLLP----SRQFGYLVLTTSGGIMDHEEARRK 411
           +          +I     V  N +     +       +  G  +L T  G++   EAR  
Sbjct: 61  IEFRFDERGNNIIKNIQFVASNQVFSTVKISALWKKEKGQGLFILLTPQGLLTDIEARNS 120

Query: 412 HLGGKIL 432
           ++GGK++
Sbjct: 121 NVGGKLV 127


>UniRef50_Q9HWE9 Cluster: 30S ribosomal protein S8; n=46;
           Bacteria|Rep: 30S ribosomal protein S8 - Pseudomonas
           aeruginosa
          Length = 130

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 237
           M   + L+D L  I NA+   ++ V+  P SK+      V+   GYI +F+I  + +  +
Sbjct: 1   MSMQDPLADMLTRIRNAQM-AEKTVVSMPSSKLKAAVAKVLKDEGYIADFQISSEVKP-Q 58

Query: 238 IVVNLTGRLNKCGVISPRFDVPINDIERWTNL--LPSRQ--FGYLVLTTSGGIMDHEEAR 405
           + + L     K  VI     +    + ++ ++  LP  +   G  +++T+ G+M    AR
Sbjct: 59  LSIELKYFEGK-PVIEEVKRISRPGLRQYKSVEQLPKVRGGLGVSIVSTNKGVMTDRAAR 117

Query: 406 RKHLGGKIL 432
              +GG++L
Sbjct: 118 AAGVGGEVL 126


>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr17 scaffold_16, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 93

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +1

Query: 352 GYLVLTTSGGIMDHEEARRKHLGGKIL 432
           G ++L+TS GIM   EAR K +GG+IL
Sbjct: 2   GIVILSTSRGIMTDREARLKRIGGEIL 28


>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
           organisms|Rep: 30S ribosomal protein S8 - Synechocystis
           sp. (strain PCC 6803)
          Length = 133

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNA--EKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 231
           M   + +SD L  I NA   +    QV   P +K+ +    V+   G+I ++    +   
Sbjct: 1   MASTDTISDMLTRIRNACAVRHSTTQV---PTTKMTLSIAKVLKSEGFIEDYSETGEGIN 57

Query: 232 GKIVVNLT--GRLNKCGVIS-PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHE 396
             +V+ L   G+  +  + +  R   P   +   +  +P      G  +++TS GIM   
Sbjct: 58  KMLVLTLKYKGKTRQPLINTLQRVSKPGLRVYSPSKKIPRVLGGIGIAIVSTSHGIMTDR 117

Query: 397 EARRKHLGGKILGFFF 444
           EARR+ +GG+IL + +
Sbjct: 118 EARRQGIGGEILCYIW 133


>UniRef50_O21254 Cluster: Ribosomal protein S8; n=1; Reclinomonas
           americana|Rep: Ribosomal protein S8 - Reclinomonas
           americana
          Length = 128

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
 Frame = +1

Query: 58  MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 237
           M ++  +   + +I   +K     V I   SK+    L V+ + GYI +FE   + +   
Sbjct: 1   MTQIQSIQSLMSNIKQGQKNNLLSVDII-YSKLNFDILNVLYEEGYIRDFEKKTNKKNQD 59

Query: 238 IVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYL--VLTTSGGIMDHEEARRK 411
           I+       N    I     V    I     LL     G +  +L+TS GI   +EA+R 
Sbjct: 60  IINVRLKYYNNTSAIKNIQRVINQHIS--LKLLNQIDLGLVTYILSTSKGIFSGKEAKRL 117

Query: 412 HLGGKIL 432
           +LGG +L
Sbjct: 118 NLGGTVL 124


>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
           Pectobacterium atrosepticum|Rep: Putative
           uncharacterized protein - Erwinia carotovora subsp.
           atroseptica (Pectobacterium atrosepticum)
          Length = 860

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = -2

Query: 133 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 17
           G + SLA   Y      H   SY  W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385


>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 186

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 21/63 (33%), Positives = 36/63 (57%)
 Frame = +1

Query: 253 TGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 432
           T ++  C +++P  D  IN +  + +L     +GY+V+TT  G++DHEE       G +L
Sbjct: 134 TWQIYFCNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE-------GPLL 182

Query: 433 GFF 441
           G+F
Sbjct: 183 GYF 185


>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
           Aeromonas phage Aeh1|Rep: Putative uncharacterized
           protein - Aeromonas phage Aeh1
          Length = 85

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
 Frame = +1

Query: 61  VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 231
           +RMN ++++  K I +A  +GKR   +    S +  + +  + KHGY  EF +  DHR+
Sbjct: 17  LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75


>UniRef50_Q7NEG6 Cluster: 30S ribosomal protein S8; n=165;
           Bacteria|Rep: 30S ribosomal protein S8 - Gloeobacter
           violaceus
          Length = 133

 Score = 32.3 bits (70), Expect = 5.9
 Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
 Frame = +1

Query: 70  NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 249
           + L+D L  I NA    K  ++  P +++      V+   G I E++   + +  ++++ 
Sbjct: 5   DTLADMLTRIRNASIV-KHDIVPVPSTRMTRSVAEVLKMEGLILEYQDQGEGKDRQLLLT 63

Query: 250 L--TGRLNKCGVIS-PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEARRKH 414
           L   GR  +  + +  R   P   +      LP      G  +++TS G+M   +ARR  
Sbjct: 64  LKYAGRQRRPLITNLKRVSRPGLRVYANRKELPRVLGGIGIAIISTSQGVMTDRDARRAG 123

Query: 415 LGGKILGFFF 444
           +GG++L + F
Sbjct: 124 VGGEVLCYVF 133


>UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:
           ISTde2, transposase - Treponema denticola
          Length = 358

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 22/71 (30%), Positives = 29/71 (40%)
 Frame = +1

Query: 145 CSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW 324
           C K   K  T    H Y   +E   +  A K++      + K   IS   D+ I  +E W
Sbjct: 284 CLKEGEKRTTCYYAHPY-SSWERGSNENANKLIRRF---IPKGADISKYSDIQIKQVENW 339

Query: 325 TNLLPSRQFGY 357
            N  P R FGY
Sbjct: 340 INNYPRRMFGY 350


>UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2;
           Aquifex|Rep: 30S ribosomal protein S8 - Aquifex aeolicus
          Length = 168

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 343 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 438
           R  G  +++T  G+M   EARR   GG+++ F
Sbjct: 135 RGLGIAIVSTDAGVMTDHEARRMRKGGEVIAF 166


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,839,883
Number of Sequences: 1657284
Number of extensions: 8087192
Number of successful extensions: 17195
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 16878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17170
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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