Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0020
         (602 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7FBU5 Cluster: Putative uncharacterized protein; n=1; ...    34   2.3  
UniRef50_UPI0000D578B4 Cluster: PREDICTED: similar to CG8312-PA,...    33   5.2  
UniRef50_Q5ZBZ5 Cluster: Potential U2 snRNA pseudouridine syntha...    33   5.2  
UniRef50_Q0JIW7 Cluster: Os01g0773000 protein; n=1; Oryza sativa...    33   5.2  
UniRef50_O15018 Cluster: PDZ domain-containing protein 2 (PDZ do...    33   5.2  
UniRef50_Q4HMN6 Cluster: Methyl-accepting chemotaxis protein; n=...    33   6.9  
UniRef50_A2F7P1 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  

>UniRef50_A7FBU5 Cluster: Putative uncharacterized protein; n=1;
           Acinetobacter baumannii ATCC 17978|Rep: Putative
           uncharacterized protein - Acinetobacter baumannii
           (strain ATCC 17978 / NCDC KC 755)
          Length = 144

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = -2

Query: 568 FEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYS 437
           ++ NF++L +NL D D+       +V++++ DS  A +D+SG S
Sbjct: 25  YQHNFDALYENLPDEDAELVLNILQVYEALKDSYDALTDKSGIS 68


>UniRef50_UPI0000D578B4 Cluster: PREDICTED: similar to CG8312-PA,
           isoform A, partial; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG8312-PA, isoform A, partial -
           Tribolium castaneum
          Length = 393

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = -2

Query: 496 EVFKSVGDSDSACSDESGYSEFLDGKESIIGNTIMV 389
           E+ +  G+++SACSDESGY E  +   S + N ++V
Sbjct: 360 ELCEEEGENESACSDESGYEE--EEVNSSVANIVLV 393


>UniRef50_Q5ZBZ5 Cluster: Potential U2 snRNA pseudouridine
           synthase-like; n=2; Oryza sativa|Rep: Potential U2 snRNA
           pseudouridine synthase-like - Oryza sativa subsp.
           japonica (Rice)
          Length = 629

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -2

Query: 532 TDADSLTSSTETEVFKSVGDSDSAC-SDESGYSEFLDGKESIIGNTIMV 389
           TD D L+ +   EV + + D  S+C S +SG    LD  ESI G +++V
Sbjct: 530 TDLDVLSKTKPLEVNELLSDGISSCTSHDSGLEASLDASESINGASLVV 578


>UniRef50_Q0JIW7 Cluster: Os01g0773000 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os01g0773000 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 606

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -2

Query: 532 TDADSLTSSTETEVFKSVGDSDSAC-SDESGYSEFLDGKESIIGNTIMV 389
           TD D L+ +   EV + + D  S+C S +SG    LD  ESI G +++V
Sbjct: 433 TDLDVLSKTKPLEVNELLSDGISSCTSHDSGLEASLDASESINGASLVV 481


>UniRef50_O15018 Cluster: PDZ domain-containing protein 2 (PDZ
            domain-containing protein 3) (Activated in prostate
            cancer protein) [Contains: Processed PDZ
            domain-containing protein 2]; n=7; Eutheria|Rep: PDZ
            domain-containing protein 2 (PDZ domain-containing
            protein 3) (Activated in prostate cancer protein)
            [Contains: Processed PDZ domain-containing protein 2] -
            Homo sapiens (Human)
          Length = 2839

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = -2

Query: 592  LSASILSTFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYSE 434
            ++ + LS +  NF S  ++ T    L  STE  +    GD++ + SD    +E
Sbjct: 1515 VNKNFLSNYSRNFSSFHEDSTSLSGLGDSTEPSLSSMYGDAEDSSSDPESLTE 1567


>UniRef50_Q4HMN6 Cluster: Methyl-accepting chemotaxis protein; n=12;
           Campylobacter|Rep: Methyl-accepting chemotaxis protein -
           Campylobacter lari RM2100
          Length = 375

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 19/65 (29%), Positives = 27/65 (41%)
 Frame = -2

Query: 568 FEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYSEFLDGKESIIGNTIMV 389
           F  NF  LI N     S   S  +E+F S+   D      +GY+E +       G T+  
Sbjct: 226 FSSNFAQLISNANSTSSHAKSIASEIFVSLAKLDHVAFKLNGYNEIIHAS----GKTLSD 281

Query: 388 *IMCR 374
            + CR
Sbjct: 282 HLSCR 286


>UniRef50_A2F7P1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 895

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 19/51 (37%), Positives = 29/51 (56%)
 Frame = -2

Query: 589 SASILSTFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYS 437
           ++SI ++ E +  S   + T++ +LTSSTETE   S   S S+   ES  S
Sbjct: 753 TSSISTSTESSTSSTSTSSTESSTLTSSTETESSTSTESSTSSTETESSTS 803


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,378,609
Number of Sequences: 1657284
Number of extensions: 9631400
Number of successful extensions: 24902
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24849
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)