Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0038
         (680 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1FPT6 Cluster: Putative uncharacterized protein precur...    34   2.8  
UniRef50_UPI00015B5D45 Cluster: PREDICTED: similar to CG5414-PA;...    33   8.5  

>UniRef50_Q1FPT6 Cluster: Putative uncharacterized protein
           precursor; n=1; Clostridium phytofermentans ISDg|Rep:
           Putative uncharacterized protein precursor - Clostridium
           phytofermentans ISDg
          Length = 385

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = +2

Query: 56  VESRNSNSARLFVHETSEF*SKLLICFVKTVNLPLIIPLFLIKMDRGSLLFEIGLLGDFS 235
           VE+   N   +FV       +   IC + T   PL + LF+ K   G+  F +GLL   +
Sbjct: 187 VETDIPNKKNIFVRSAIPVAAISFICIILTCTYPLNVSLFVQKSGLGNSQF-VGLLASIN 245

Query: 236 GIINFSVLILVG 271
             I F + ++ G
Sbjct: 246 SAIGFFIGLVFG 257


>UniRef50_UPI00015B5D45 Cluster: PREDICTED: similar to CG5414-PA;
           n=2; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG5414-PA - Nasonia vitripennis
          Length = 1193

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 548 FEPDNFIHHTKTDQLPTAREQSDQHRKRCISVRRPLVSFPSSL 420
           F+P ++   ++T       E  D H+ +C +VR P+V  PS L
Sbjct: 454 FKPVHWSPSSRTALAEAELEYRDNHQSKCATVRLPIVELPSKL 496


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,324,761
Number of Sequences: 1657284
Number of extensions: 12502713
Number of successful extensions: 29322
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29313
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)