Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0004
(579 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 191 1e-47
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 174 1e-42
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 171 1e-41
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 161 1e-38
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 156 3e-37
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 154 2e-36
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 152 7e-36
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 151 9e-36
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 148 1e-34
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 140 2e-32
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 137 2e-31
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 136 4e-31
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 136 4e-31
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 136 4e-31
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 135 8e-31
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 126 4e-28
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 125 7e-28
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 125 7e-28
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 123 3e-27
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 119 6e-26
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 119 6e-26
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 113 4e-24
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 112 5e-24
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 112 5e-24
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 110 2e-23
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 105 8e-22
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 105 8e-22
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 105 8e-22
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 105 8e-22
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 101 1e-20
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 99 7e-20
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 93 3e-18
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 90 4e-17
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 88 1e-16
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 86 7e-16
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 84 3e-15
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 83 6e-15
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 3e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 80 3e-14
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 79 6e-14
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 74 3e-12
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 69 6e-11
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 64 2e-09
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 64 2e-09
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 63 4e-09
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 62 9e-09
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 60 4e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 6e-08
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 59 9e-08
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 59 9e-08
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 58 1e-07
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 58 2e-07
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 58 2e-07
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 57 3e-07
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 57 3e-07
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 57 3e-07
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 56 6e-07
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 55 1e-06
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 53 4e-06
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 53 4e-06
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 53 6e-06
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 52 1e-05
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 50 3e-05
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 50 3e-05
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 49 7e-05
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 49 9e-05
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 48 1e-04
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 48 1e-04
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 47 3e-04
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 47 3e-04
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 46 6e-04
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 45 0.001
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 45 0.001
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 45 0.001
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 43 0.005
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 43 0.006
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 42 0.008
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 41 0.024
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 40 0.032
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 40 0.056
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 40 0.056
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 40 0.056
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 39 0.074
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 39 0.074
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.074
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 38 0.17
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 38 0.23
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 37 0.39
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 36 0.69
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 36 0.69
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 34 2.1
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 2.1
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 33 4.9
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 8.5
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 32 8.5
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 191 bits (465), Expect = 1e-47
Identities = 106/188 (56%), Positives = 112/188 (59%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 195
+TNHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 6 STNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFF 65
Query: 196 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 375
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TV
Sbjct: 66 MVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTV 125
Query: 376 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 555
YPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLFV AV
Sbjct: 126 YPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAV 185
Query: 556 GITAFLLL 579
GITAFLLL
Sbjct: 186 GITAFLLL 193
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 174 bits (423), Expect = 1e-42
Identities = 98/180 (54%), Positives = 113/180 (62%)
Frame = -2
Query: 578 NNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCA 399
N+K AV T TN G S I +R I+E PAKC+EKI STD P CA
Sbjct: 39 NSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACA 98
Query: 398 ILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNP 219
I SGG TVHPVP P STI L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNP
Sbjct: 99 IPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNP 158
Query: 218 PXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 39
P KA AVT+ L I S PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 159 PIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 171 bits (415), Expect = 1e-41
Identities = 92/157 (58%), Positives = 99/157 (63%)
Frame = +1
Query: 109 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 288
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 289 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 468
+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 469 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 579
SFDQ+PLF+ AVGITA LLL
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLL 169
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 161 bits (391), Expect = 1e-38
Identities = 93/188 (49%), Positives = 104/188 (55%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 195
+TNHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 10 STNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFF 69
Query: 196 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 375
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TV
Sbjct: 70 MVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTV 129
Query: 376 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 555
YPPL+ N+AH G SVDLAIFSLHLAGISS S Q PLFV +V
Sbjct: 130 YPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSV 189
Query: 556 GITAFLLL 579
ITA LLL
Sbjct: 190 LITAVLLL 197
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 156 bits (379), Expect = 3e-37
Identities = 89/188 (47%), Positives = 101/188 (53%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 195
+TNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 9 STNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFF 68
Query: 196 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 375
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TV
Sbjct: 69 MVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTV 128
Query: 376 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 555
YPPL+ N+AH G SVDL IFSLHLAG+SS S Q PLFV AV
Sbjct: 129 YPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAV 188
Query: 556 GITAFLLL 579
+TA LLL
Sbjct: 189 LVTAVLLL 196
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 154 bits (373), Expect = 2e-36
Identities = 87/188 (46%), Positives = 101/188 (53%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 195
+TNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 9 STNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFF 68
Query: 196 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 375
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TV
Sbjct: 69 MVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTV 128
Query: 376 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 555
YPPL+ N+AH G SVDL IFSLHLAG+SS + Q PLFV +V
Sbjct: 129 YPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSV 188
Query: 556 GITAFLLL 579
+TA LLL
Sbjct: 189 LVTAVLLL 196
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 152 bits (368), Expect = 7e-36
Identities = 86/188 (45%), Positives = 101/188 (53%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 195
+TNHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 9 STNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFF 68
Query: 196 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 375
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG TV
Sbjct: 69 MVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTV 128
Query: 376 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 555
YPPL+ N +H G SVDL IFSLHLAG+SS + Q PLFV +V
Sbjct: 129 YPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSV 188
Query: 556 GITAFLLL 579
ITA LLL
Sbjct: 189 LITAVLLL 196
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 151 bits (367), Expect = 9e-36
Identities = 87/185 (47%), Positives = 98/185 (52%)
Frame = +1
Query: 25 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 204
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 205 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 384
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120
Query: 385 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 564
L+ N+AH G SVDL IFSLHLAGISS S Q PLFV AV IT
Sbjct: 121 LAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLIT 180
Query: 565 AFLLL 579
A LLL
Sbjct: 181 AVLLL 185
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 148 bits (358), Expect = 1e-34
Identities = 82/186 (44%), Positives = 99/186 (53%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 201
NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 12 NHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLV 71
Query: 202 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 381
N VPL++GAPD+AFPR+NNI F +VE GAGTG TVYP
Sbjct: 72 MPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYP 131
Query: 382 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 561
PL+S AH G SVD+AIFSLHLAG+SS + ++PLFV +V I
Sbjct: 132 PLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLI 191
Query: 562 TAFLLL 579
TA LLL
Sbjct: 192 TAILLL 197
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 140 bits (340), Expect = 2e-32
Identities = 77/157 (49%), Positives = 89/157 (56%)
Frame = +1
Query: 109 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 288
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 289 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 468
+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 469 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 579
+ + LFV +V ITA LLL
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLL 179
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 137 bits (332), Expect = 2e-31
Identities = 78/190 (41%), Positives = 98/190 (51%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXX 189
+TNHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 10 STNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMI 69
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N VP+++GAPD+AFPR+NNI F +VE G+GTG
Sbjct: 70 FFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGW 129
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
TVYPPLS +H G +VDLAIFSLHL+G+SS + +LPLFV
Sbjct: 130 TVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVW 189
Query: 550 AVGITAFLLL 579
+V +TAFLLL
Sbjct: 190 SVLVTAFLLL 199
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 136 bits (329), Expect = 4e-31
Identities = 82/190 (43%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 7 STNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMI 66
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 67 FFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGW 126
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 127 TVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVW 186
Query: 550 AVGITAFLLL 579
A+ +TA LLL
Sbjct: 187 AIFVTAILLL 196
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 136 bits (329), Expect = 4e-31
Identities = 82/190 (43%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 7 STNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMI 66
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 67 FFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGW 126
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 127 TVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVW 186
Query: 550 AVGITAFLLL 579
A+ +TA LLL
Sbjct: 187 AIFVTAILLL 196
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 136 bits (329), Expect = 4e-31
Identities = 82/190 (43%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 7 STNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMI 66
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 67 FFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGW 126
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 127 TVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVW 186
Query: 550 AVGITAFLLL 579
A+ +TA LLL
Sbjct: 187 AIFVTAILLL 196
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 135 bits (326), Expect = 8e-31
Identities = 77/190 (40%), Positives = 99/190 (52%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TNHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 15 STNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMI 74
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N LVP+++G+PD+AFPR+NNI F +VE G GTG
Sbjct: 75 FFMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGW 134
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
TVYPPLSS +H G +VDLAIFSLH++G SS S ++PLFV
Sbjct: 135 TVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVW 194
Query: 550 AVGITAFLLL 579
++ +TAFLLL
Sbjct: 195 SILVTAFLLL 204
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 126 bits (304), Expect = 4e-28
Identities = 70/157 (44%), Positives = 86/157 (54%)
Frame = +1
Query: 109 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 288
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 289 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 468
+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 469 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 579
+ D++ LF +V ITA LLL
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLL 180
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 125 bits (302), Expect = 7e-28
Identities = 78/190 (41%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 8 STNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMI 67
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N L+PL++GA D AFPRINNI F +VE+GAGTG
Sbjct: 68 FFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGW 127
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLFV
Sbjct: 128 TVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVW 187
Query: 550 AVGITAFLLL 579
++ ITAFLLL
Sbjct: 188 SIFITAFLLL 197
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 125 bits (302), Expect = 7e-28
Identities = 78/190 (41%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 8 STNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMI 67
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N L+PL++GA D AFPRINNI F +VE+GAGTG
Sbjct: 68 FFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGW 127
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLFV
Sbjct: 128 TVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVW 187
Query: 550 AVGITAFLLL 579
++ ITAFLLL
Sbjct: 188 SIFITAFLLL 197
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 123 bits (297), Expect = 3e-27
Identities = 76/190 (40%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TN KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 8 STNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMI 67
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N ++PL++GA D++FPRIN+I F +VE+GAGTG
Sbjct: 68 FFLAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGW 127
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
TVYPPLSS AH G SVDLAIFSLHL ISS S ++PLFV
Sbjct: 128 TVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVW 187
Query: 550 AVGITAFLLL 579
A+ ITAFLLL
Sbjct: 188 AIFITAFLLL 197
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 119 bits (286), Expect = 6e-26
Identities = 74/190 (38%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TN KDI LY EL PG L G++Q++N +V HA
Sbjct: 8 STNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMI 67
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N ++PL++GA D AFPRINNI F +VE+GAGTG
Sbjct: 68 FFMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGW 127
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
TVYPPL+S AH G SVDLAIF+LH+ ISS + +LPLFV
Sbjct: 128 TVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVW 187
Query: 550 AVGITAFLLL 579
A+ ITA LLL
Sbjct: 188 AILITAVLLL 197
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 119 bits (286), Expect = 6e-26
Identities = 74/189 (39%), Positives = 89/189 (47%), Gaps = 1/189 (0%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 192
++N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 9 SSNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIF 68
Query: 193 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 372
N L+PL LG PD+ FPR+NNI + +ENG GTG T
Sbjct: 69 FMVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWT 128
Query: 373 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 552
+YPPLS +H G SVDLAIF LHL+GISS +L LF A
Sbjct: 129 LYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWA 188
Query: 553 VGITAFLLL 579
V ITA LLL
Sbjct: 189 VVITAVLLL 197
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 113 bits (271), Expect = 4e-24
Identities = 65/158 (41%), Positives = 82/158 (51%), Gaps = 5/158 (3%)
Frame = +1
Query: 4 RRHEATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAX 180
R +TN KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 33 RWFNSTNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAI 92
Query: 181 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG 360
N L+PL++G PD+AFPR+NNI F I+E G G
Sbjct: 93 LMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVG 152
Query: 361 TG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 462
TG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 153 TGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 112 bits (270), Expect = 5e-24
Identities = 72/190 (37%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 13 STNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMI 72
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N L+PL+LGA D+AF R+NNI F +VE GAGTG
Sbjct: 73 FFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGW 132
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
TVY PL+ +H G +VDLAIFSLHL+G SS ++ +PLF
Sbjct: 133 TVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAW 192
Query: 550 AVGITAFLLL 579
AV TA LLL
Sbjct: 193 AVLFTAILLL 202
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 112 bits (270), Expect = 5e-24
Identities = 67/189 (35%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 192
++N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 35 SSNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIF 94
Query: 193 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 372
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T
Sbjct: 95 FMVMPALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWT 154
Query: 373 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 552
+YPPLS +H VDL IF LHL+GISS +L LF A
Sbjct: 155 LYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWA 214
Query: 553 VGITAFLLL 579
V ITA LLL
Sbjct: 215 VVITAVLLL 223
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 110 bits (265), Expect = 2e-23
Identities = 68/189 (35%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Frame = +1
Query: 19 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 192
TNHK IG LY EL PG L G+ YN I T H
Sbjct: 12 TNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLF 71
Query: 193 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 372
N VP+++GAPD++FPR+NN F E G GTG T
Sbjct: 72 VVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWT 131
Query: 373 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 552
VYPPLSS +H G SVDL IFS HL GI S LPLFV +
Sbjct: 132 VYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWS 191
Query: 553 VGITAFLLL 579
V +T+FL++
Sbjct: 192 VAVTSFLVI 200
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 105 bits (252), Expect = 8e-22
Identities = 63/190 (33%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXXX 189
+TN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 25 STNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMV 84
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N LVPL +G+ D AFPRINN+ F +++ G G+G
Sbjct: 85 FYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGW 144
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 550 AVGITAFLLL 579
+V ITA L++
Sbjct: 205 SVLITAVLII 214
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 105 bits (252), Expect = 8e-22
Identities = 63/190 (33%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXXX 189
+TN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 25 STNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMV 84
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N LVPL +G+ D AFPRINN+ F +++ G G+G
Sbjct: 85 FYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGW 144
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 550 AVGITAFLLL 579
+V ITA L++
Sbjct: 205 SVLITAVLII 214
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 105 bits (252), Expect = 8e-22
Identities = 63/190 (33%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXXX 189
+TN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 25 STNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMV 84
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N LVPL +G+ D AFPRINN+ F +++ G G+G
Sbjct: 85 FYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGW 144
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 550 AVGITAFLLL 579
+V ITA L++
Sbjct: 205 SVLITAVLII 214
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 105 bits (252), Expect = 8e-22
Identities = 63/190 (33%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXXX 189
+TN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 25 STNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMV 84
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N LVPL +G+ D AFPRINN+ F +++ G G+G
Sbjct: 85 FYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGW 144
Query: 370 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 549
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 550 AVGITAFLLL 579
+V ITA L++
Sbjct: 205 SVLITAVLII 214
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 101 bits (242), Expect = 1e-20
Identities = 58/125 (46%), Positives = 67/125 (53%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 195
+TNHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 10 STNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFX 69
Query: 196 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 375
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TV
Sbjct: 70 MXMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTV 129
Query: 376 YPPLS 390
YPPL+
Sbjct: 130 YPPLA 134
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 99.1 bits (236), Expect = 7e-20
Identities = 74/208 (35%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY- 153
+TNHKDIGTLY AEL PG + D DQ Y
Sbjct: 33 STNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYH 92
Query: 154 --NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 327
N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 328 XXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 495
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 496 XXXXXXXXSFDQLPLFV*AVGITAFLLL 579
+ ++PLFV +V +TAFLLL
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLL 239
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 93.5 bits (222), Expect = 3e-18
Identities = 56/112 (50%), Positives = 63/112 (56%)
Frame = +1
Query: 244 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 423
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 424 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 579
LAIFSLH+AG+ S + ++PLFV AV ITA LLL
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLL 115
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 89.8 bits (213), Expect = 4e-17
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Frame = +1
Query: 106 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 279
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 280 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 459
+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 460 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 579
S + ++PLF +V +TA+LLL
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLL 302
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 88.2 bits (209), Expect = 1e-16
Identities = 51/118 (43%), Positives = 61/118 (51%)
Frame = +1
Query: 109 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 288
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 289 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 462
+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 85.8 bits (203), Expect = 7e-16
Identities = 46/150 (30%), Positives = 70/150 (46%)
Frame = +1
Query: 13 EATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 192
++ NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 10 KSVNHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIF 69
Query: 193 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 372
N +PL++ D++ PR+NN+ + G G G T
Sbjct: 70 FFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWT 129
Query: 373 VYPPLSSNIAHRGRSVDLAIFSLHLAGISS 462
+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 130 MYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 83.8 bits (198), Expect = 3e-15
Identities = 54/188 (28%), Positives = 75/188 (39%), Gaps = 2/188 (1%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 195
NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 20 NHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFF 79
Query: 196 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 375
N ++PL+LGAP++AFPR+N + F + G G+ T
Sbjct: 80 LVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTF 139
Query: 376 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 555
YPPLS S+D I LH GI S + DQ+ +FV
Sbjct: 140 YPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTS 198
Query: 556 GITAFLLL 579
+T+FLL+
Sbjct: 199 YLTSFLLV 206
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 82.6 bits (195), Expect = 6e-15
Identities = 52/130 (40%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 7 STNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMI 66
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 67 FFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGW 126
Query: 370 TVYPPLSSNI 399
TV LS I
Sbjct: 127 TVKCKLSQII 136
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +1
Query: 244 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 423
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 424 LAIFS 438
LAI+S
Sbjct: 61 LAIYS 65
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 80.2 bits (189), Expect = 3e-14
Identities = 47/152 (30%), Positives = 64/152 (42%)
Frame = +1
Query: 124 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 303
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 304 XXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXX 483
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINL 167
Query: 484 XXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 579
SF LF+ A ITA LL+
Sbjct: 168 LGTLFCCRRKFFSFLSWSLFIWAALITAILLI 199
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 79.4 bits (187), Expect = 6e-14
Identities = 44/122 (36%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXX 189
+TNHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 11 STNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMI 70
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N VP+++G+PD+AFPR+NNI F +VE G G+G
Sbjct: 71 FFMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGW 130
Query: 370 TV 375
TV
Sbjct: 131 TV 132
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 73.7 bits (173), Expect = 3e-12
Identities = 63/147 (42%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Frame = +1
Query: 25 HKDIGTL-YXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 201
HKD GTL + L G +IG QI VTA A
Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60
Query: 202 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 381
L PL +GAP +A PR+ N+ F + G G VYP
Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYP 120
Query: 382 PLSSNIAHRGRSVDLAIFSLHLAGISS 462
P SS +AH +VDL IF LHLAGISS
Sbjct: 121 PXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 69.3 bits (162), Expect = 6e-11
Identities = 46/130 (35%), Positives = 57/130 (43%), Gaps = 2/130 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 13 STNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMI 72
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N L+PL+LGA D+AF R+NNI F +VE GAGTG
Sbjct: 73 FFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGW 132
Query: 370 TVYPPLSSNI 399
TV SS +
Sbjct: 133 TVKKICSSKM 142
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 64.5 bits (150), Expect = 2e-09
Identities = 51/155 (32%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 201
+HKDIG LY EL +PG + + YN+++T+H
Sbjct: 93 DHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFA 152
Query: 202 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF--XXXXXXXXXXXXXXIVE-NGAGTG*T 372
N L+PL++GA D+AFPRIN I F I E A TG T
Sbjct: 153 TPIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWT 211
Query: 373 VYPPLS-----SNIAHRGRSVDLAIFSLHLAGISS 462
+Y PLS N A+ G VDL + LHL+G+S+
Sbjct: 212 MYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSA 244
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 64.1 bits (149), Expect = 2e-09
Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 3/189 (1%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDD--QIYNTIVTAHAXXXXX 192
NHK IG Y EL G +I D +IYN + T H
Sbjct: 16 NHKIIGISYLWLAYWFGMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVF 75
Query: 193 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 372
N L P++LG D+ +PR+N +E G+GTG T
Sbjct: 76 FNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWT 135
Query: 373 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 552
+YPPLS+++++ G +D IF L AGI+S D++ +
Sbjct: 136 LYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWS 193
Query: 553 VGITAFLLL 579
+ +T+FLLL
Sbjct: 194 IVLTSFLLL 202
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 63.3 bits (147), Expect = 4e-09
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 189
+TN KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 8 STNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMI 67
Query: 190 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 369
N L+PL++GA D++F R+NNI F +VE+GAGTG
Sbjct: 68 FFLVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGW 127
Query: 370 TV 375
TV
Sbjct: 128 TV 129
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 62.1 bits (144), Expect = 9e-09
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQI--YNTIVTAHAXXXXX 192
NHK +G Y EL + +I + + YN I T H
Sbjct: 13 NHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIF 72
Query: 193 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 372
N +P++ G+P++A+PRIN+I E G GTG T
Sbjct: 73 FNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWT 132
Query: 373 VYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 462
+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 133 LYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +1
Query: 382 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 561
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 562 TAFLLL 579
T LLL
Sbjct: 132 TTVLLL 137
Score = 35.1 bits (77), Expect = 1.2
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 216 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 341
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 6e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 340 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 462
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 58.8 bits (136), Expect = 9e-08
Identities = 46/194 (23%), Positives = 69/194 (35%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 WRRHEATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAX 180
W T+HK +G +Y AEL PG ++ +N + T H
Sbjct: 30 WLMMTTTDHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGT 89
Query: 181 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG 360
N ++PL +GAPD+AFPR+N F + GA
Sbjct: 90 VMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAA 148
Query: 361 T-G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 537
G T+Y PLS I G D+ I + GI S + ++P
Sbjct: 149 DFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMP 208
Query: 538 LFV*AVGITAFLLL 579
+F + + + L L
Sbjct: 209 IFTWNIFVVSVLAL 222
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 58.8 bits (136), Expect = 9e-08
Identities = 47/188 (25%), Positives = 70/188 (37%), Gaps = 1/188 (0%)
Frame = +1
Query: 19 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 198
T+HKDIG LY +L P S Y VT H
Sbjct: 19 TDHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWF 78
Query: 199 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TV 375
N +VPL +GA D+AFPR+N + + E+GA G T+
Sbjct: 79 ASPFAFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTL 137
Query: 376 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 555
Y PL++ I G +DLA ++ L +S + ++P+F ++
Sbjct: 138 YAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSI 197
Query: 556 GITAFLLL 579
T L+L
Sbjct: 198 LFTVILML 205
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 58.4 bits (135), Expect = 1e-07
Identities = 44/149 (29%), Positives = 59/149 (39%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 195
+ NH D+ LY +L P L D +YN VT H
Sbjct: 6 SVNHIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFF 63
Query: 196 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 375
N L+P PD+ FPR+N + F ++ + A G T
Sbjct: 64 AAMPTAIGFFANLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTF 118
Query: 376 YPPLSSNIAHRGRSVDLAIFSLHLAGISS 462
YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 119 YPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 57.6 bits (133), Expect = 2e-07
Identities = 47/184 (25%), Positives = 69/184 (37%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 201
+HK IG ++ EL PG I D YN + T H
Sbjct: 34 DHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFM 93
Query: 202 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 381
N L+P+++GA D+AFP++N + F +V+ GA TG T Y
Sbjct: 94 IPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYT 152
Query: 382 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 561
P S+ + V L F L G SS + +LPLFV ++
Sbjct: 153 PYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYA 209
Query: 562 TAFL 573
T+ +
Sbjct: 210 TSVI 213
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 57.6 bits (133), Expect = 2e-07
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 6/193 (3%)
Frame = +1
Query: 19 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI----GDDQIYNTIVTAHAXXX 186
T+HK IG LY EL G I + IYN +T H
Sbjct: 16 TSHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIM 75
Query: 187 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI-VENGAGT 363
N L+P+++G +++ PR+N I F + + +
Sbjct: 76 LFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISS 135
Query: 364 G*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 540
G T+YPPLS+ A G ++DL++ +H+ GISS +F + +
Sbjct: 136 GWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINI 195
Query: 541 FV*AVGITAFLLL 579
+ ++ +T+ LL+
Sbjct: 196 YNFSIIVTSILLI 208
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 57.2 bits (132), Expect = 3e-07
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 1/142 (0%)
Frame = +1
Query: 151 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 330
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 331 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 507
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 508 XXXXSFDQLPLFV*AVGITAFL 573
++ +LPL + + +TA L
Sbjct: 206 APGMTYMRLPLTIWGLWLTAIL 227
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 56.8 bits (131), Expect = 3e-07
Identities = 46/182 (25%), Positives = 66/182 (36%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 201
+HK IG ++ EL PG I D YN T H
Sbjct: 41 DHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFM 100
Query: 202 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 381
N ++PL+LGA D+AFPR+N + ++ G TG T Y
Sbjct: 101 IPAIPAVFGNFMLPLMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYT 159
Query: 382 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 561
P S AH +V +F + G SS ++ ++PLFV A+
Sbjct: 160 PYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYA 216
Query: 562 TA 567
T+
Sbjct: 217 TS 218
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 56.8 bits (131), Expect = 3e-07
Identities = 42/186 (22%), Positives = 66/186 (35%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 201
+HK +G +Y A+L P + D YN I T H
Sbjct: 52 DHKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMA 111
Query: 202 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 381
N +VPL +GA D+AFP +NN+ F ++ G T Y
Sbjct: 112 MPFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYM 170
Query: 382 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 561
PL+SN G + + L +AGI + + ++P+F I
Sbjct: 171 PLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLI 230
Query: 562 TAFLLL 579
T +++
Sbjct: 231 TMVIIV 236
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 56.0 bits (129), Expect = 6e-07
Identities = 40/149 (26%), Positives = 60/149 (40%), Gaps = 2/149 (1%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 201
+HKDIG LY EL + +YN ++T+H
Sbjct: 67 DHKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFG 126
Query: 202 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TV 375
N +PL++ A D+AFPRIN I F ++ A T T+
Sbjct: 127 TPMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTM 185
Query: 376 YPPLSSNIAHRGRSVDLAIFSLHLAGISS 462
Y PLS ++ +VD+ + LHL G+S+
Sbjct: 186 YTPLSLQMS--SPAVDMMMLGLHLTGVSA 212
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 55.2 bits (127), Expect = 1e-06
Identities = 43/187 (22%), Positives = 66/187 (35%)
Frame = +1
Query: 19 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 198
T+HK IG +Y +LG P + +YN + T H
Sbjct: 29 TDHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLG 88
Query: 199 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 378
N +VPL++GA D+AFPR+N + V G Y
Sbjct: 89 LMPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAY 147
Query: 379 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 558
PL+ VD I + L G++S + +++PLFV
Sbjct: 148 APLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQL 207
Query: 559 ITAFLLL 579
+ AF+L+
Sbjct: 208 VVAFILI 214
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 53.2 bits (122), Expect = 4e-06
Identities = 35/114 (30%), Positives = 49/114 (42%)
Frame = +1
Query: 121 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 300
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 301 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 462
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASS 113
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 53.2 bits (122), Expect = 4e-06
Identities = 43/186 (23%), Positives = 66/186 (35%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 201
+HK IG +Y +L P + +++N + T H
Sbjct: 31 DHKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVG 90
Query: 202 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 381
N VPL++GA D+AFPR+N+ F + + G Y
Sbjct: 91 MPVLTGFA-NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYV 149
Query: 382 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 561
PLSS + VD I L + GI S S ++PLFV + +
Sbjct: 150 PLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLM 209
Query: 562 TAFLLL 579
A L++
Sbjct: 210 QAILII 215
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 52.8 bits (121), Expect = 6e-06
Identities = 41/147 (27%), Positives = 55/147 (37%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 201
+HK IG LY L +P + +YN +VT H
Sbjct: 109 DHKRIGLLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFL 168
Query: 202 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 381
N +P+ L D+ PR+N++ G G G T+YP
Sbjct: 169 MPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYP 226
Query: 382 PLSSNIAHRGRSVDLAIFSLHLAGISS 462
PLS G VD +FSLHLAG+SS
Sbjct: 227 PLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 52.0 bits (119), Expect = 1e-05
Identities = 46/194 (23%), Positives = 68/194 (35%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 WRRHEATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHA 177
W +HK IG Y +L P + IG D+ YN I T H
Sbjct: 21 WGALSTVDHKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHG 79
Query: 178 XXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA 357
LVPL++G IAFPR+N + V+ G
Sbjct: 80 SNMMFLFAVPVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGP 138
Query: 358 GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 537
G Y PLS G+ D+ + +S+ S D++P
Sbjct: 139 DIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIP 198
Query: 538 LFV*AVGITAFLLL 579
LFV ++ +T+FL++
Sbjct: 199 LFVWSMLVTSFLVI 212
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 50.4 bits (115), Expect = 3e-05
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 4/147 (2%)
Frame = +1
Query: 145 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 324
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 325 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 492
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 493 XXXXXXXXXSFDQLPLFV*AVGITAFL 573
+ +LPL + A+ ITA L
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALL 232
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 50.4 bits (115), Expect = 3e-05
Identities = 48/186 (25%), Positives = 64/186 (34%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 201
+HK IG Y EL P ++YN ++T H
Sbjct: 26 DHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWI 85
Query: 202 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 381
N L+PL++G D+AFPR+N + F V G T YP
Sbjct: 86 VPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYP 143
Query: 382 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 561
PLS G +L I SL L G SS +PLF A+
Sbjct: 144 PLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLA 201
Query: 562 TAFLLL 579
T+ L+L
Sbjct: 202 TSSLIL 207
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 49.2 bits (112), Expect = 7e-05
Identities = 46/187 (24%), Positives = 69/187 (36%), Gaps = 5/187 (2%)
Frame = +1
Query: 1 WRRHEA--TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAH 174
W+R + T+ K IG Y EL P + + D +YN + T H
Sbjct: 26 WKRFFSFNTDAKVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNGLYTMH 85
Query: 175 AXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG 354
N L+P ++GAPD+AFP++N F G
Sbjct: 86 GTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGG 144
Query: 355 -AGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 525
A +G YPP+S + + H L I ++ L+GISS F
Sbjct: 145 PASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGF 204
Query: 526 DQLPLFV 546
++P+FV
Sbjct: 205 FRMPVFV 211
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 48.8 bits (111), Expect = 9e-05
Identities = 46/187 (24%), Positives = 67/187 (35%), Gaps = 1/187 (0%)
Frame = +1
Query: 19 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXX 195
T+HK +G LY EL G I DD +YNT + H
Sbjct: 12 TDHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILA 71
Query: 196 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 375
N +PL++GA D+AFPR+N + + + T
Sbjct: 72 FQIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTG 131
Query: 376 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 555
YPP S I H + FS+ L G +S +++L +FV A
Sbjct: 132 YPPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT 188
Query: 556 GITAFLL 576
+ AF+L
Sbjct: 189 -LAAFVL 194
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 48.4 bits (110), Expect = 1e-04
Identities = 39/186 (20%), Positives = 64/186 (34%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 201
NH D+G ++ A+L P S + YN + T H
Sbjct: 28 NHTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFA 87
Query: 202 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 381
L+P +LG+ D+AFPR+ F + +G +YP
Sbjct: 88 IPVFEGFAVY-LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYP 146
Query: 382 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 561
PLSS + G + D + + IS+ S ++P+F +
Sbjct: 147 PLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALV 206
Query: 562 TAFLLL 579
TA ++L
Sbjct: 207 TAVMIL 212
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 48.4 bits (110), Expect = 1e-04
Identities = 45/194 (23%), Positives = 65/194 (33%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 WRRHEATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAX 180
W +HK IG +Y +L P + + YN I+T H
Sbjct: 16 WDLLTTVDHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGA 75
Query: 181 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA- 357
N +VPL+LGA D+A PR+N + GA
Sbjct: 76 TMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAP 135
Query: 358 GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 537
G T Y P S A VD + ++ L G SS S ++P
Sbjct: 136 SVGWTFYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMP 192
Query: 538 LFV*AVGITAFLLL 579
++V +V + L L
Sbjct: 193 IYVWSVFAASVLNL 206
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 47.2 bits (107), Expect = 3e-04
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 229 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 405
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 406 RGRSVDLAIFSLHLAGISS 462
+ VDL + + +AG SS
Sbjct: 144 KSIGVDLILLGIIIAGFSS 162
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 47.2 bits (107), Expect = 3e-04
Identities = 39/193 (20%), Positives = 65/193 (33%)
Frame = +1
Query: 1 WRRHEATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAX 180
W +HK I LY +L P + Q YN ++T H
Sbjct: 16 WDYLTTVDHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGT 75
Query: 181 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG 360
N +VPL +GA D++FP +N + F +
Sbjct: 76 TMIFLAAMPLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPD 134
Query: 361 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 540
G T Y LS + +G +D + L ++G+ + ++ +LPL
Sbjct: 135 AGWTSYASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPL 192
Query: 541 FV*AVGITAFLLL 579
F + + L+L
Sbjct: 193 FTWTTFVASALIL 205
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 46.0 bits (104), Expect = 6e-04
Identities = 39/194 (20%), Positives = 69/194 (35%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 WRRHEAT-NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 177
WR T NH D+G ++ A+L +P S + Y + T H
Sbjct: 20 WRGWFTTVNHTDLGRMFLGASVVFFLIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHG 79
Query: 178 XXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA 357
L+P +LG+ D+A+PR++ F +
Sbjct: 80 TIMMFLFAIPMFEGLTIY-LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAP 138
Query: 358 GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 537
+G +YPPL+S + G + D + + IS+ S D++P
Sbjct: 139 DSGWFMYPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMP 198
Query: 538 LFV*AVGITAFLLL 579
++ +TA ++L
Sbjct: 199 IYGWYALVTATMIL 212
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = +1
Query: 229 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 408
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 409 GRSVDLAIFSLHLAGISS 462
VD I++L ++GI +
Sbjct: 185 DVGVDYYIWALQISGIGT 202
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 44.8 bits (101), Expect = 0.001
Identities = 34/125 (27%), Positives = 46/125 (36%)
Frame = +1
Query: 19 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 198
TNHKDIG LY EL + G+ + YN V+ H
Sbjct: 20 TNHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWF 79
Query: 199 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 378
N LVPL +GA D+AFPR+N + + G T+Y
Sbjct: 80 ISPFAFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMY 138
Query: 379 PPLSS 393
PL++
Sbjct: 139 APLNT 143
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +1
Query: 229 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 408
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 409 GRSVDLAIFSLHLAGISS 462
G VD I++L L+G+ +
Sbjct: 184 GVGVDYYIWALQLSGLGT 201
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 43.2 bits (97), Expect = 0.005
Identities = 44/181 (24%), Positives = 64/181 (35%), Gaps = 1/181 (0%)
Frame = +1
Query: 1 WRRHEATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHA 177
W+ +T+H D+G LY AEL PG+ I D +N + T H
Sbjct: 12 WQIMFSTHHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHG 71
Query: 178 XXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA 357
N VP+++ D+A+P++N I F +
Sbjct: 72 TTLIFLFILPFASAVG-NYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWY 130
Query: 358 GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 537
T PP S I+ G + D+ IF L + GISS S Q+P
Sbjct: 131 AT-----PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVP 184
Query: 538 L 540
L
Sbjct: 185 L 185
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 42.7 bits (96), Expect = 0.006
Identities = 31/117 (26%), Positives = 47/117 (40%)
Frame = +1
Query: 229 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 408
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 409 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 579
G VD I+SL LA + S +PLF TA +++
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMI 260
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 42.3 bits (95), Expect = 0.008
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +1
Query: 229 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 408
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 409 GRSVDLAIFSLHLAGISS 462
VD +S+ ++GI +
Sbjct: 179 WVGVDYWNWSIQISGIGT 196
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 40.7 bits (91), Expect = 0.024
Identities = 26/114 (22%), Positives = 47/114 (41%)
Frame = +1
Query: 235 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 414
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 415 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLL 576
S D + + LA I+S S ++P+ + + TAF++
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMI 237
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 40.3 bits (90), Expect = 0.032
Identities = 34/145 (23%), Positives = 46/145 (31%)
Frame = +1
Query: 19 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 198
T+HK IG LY +L P + YN ++T HA
Sbjct: 30 TDHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFF 89
Query: 199 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 378
N +PL LG D+A PR+N G T Y
Sbjct: 90 LIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFY 149
Query: 379 PPLSSNIAHRGRSVDLAIFSLHLAG 453
PL+ + G SV + L+ G
Sbjct: 150 YPLTMDGNQTGVSVFMVAVILNGLG 174
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 39.5 bits (88), Expect = 0.056
Identities = 32/146 (21%), Positives = 51/146 (34%), Gaps = 3/146 (2%)
Frame = +1
Query: 145 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 324
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 325 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 495
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 496 XXXXXXXXSFDQLPLFV*AVGITAFL 573
+F +LP+ + + ITA L
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAIL 235
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 39.5 bits (88), Expect = 0.056
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Frame = +1
Query: 109 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 285
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 286 NIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP 384
+ + V G G G T+YPP
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 39.5 bits (88), Expect = 0.056
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = +1
Query: 22 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 195
NHK I Y EL +P S GD Y +VTAH
Sbjct: 59 NHKRIAINYLYFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFF 118
Query: 196 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 297
N L+P +G+ D+A+PR+N+I F
Sbjct: 119 VVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 39.1 bits (87), Expect = 0.074
Identities = 24/95 (25%), Positives = 36/95 (37%)
Frame = +1
Query: 1 WRRHEATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAX 180
W +HK IG +Y +L PG + + +N + T HA
Sbjct: 21 WSWVATVDHKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHAT 80
Query: 181 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 285
N +PL++GA D+AFPR+N
Sbjct: 81 TMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 39.1 bits (87), Expect = 0.074
Identities = 25/115 (21%), Positives = 46/115 (40%)
Frame = +1
Query: 235 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 414
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 415 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 579
+D + IS+ S +++P+FV AV + +F+++
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIV 219
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.074
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +3
Query: 273 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 443
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 37.9 bits (84), Expect = 0.17
Identities = 35/149 (23%), Positives = 57/149 (38%), Gaps = 4/149 (2%)
Frame = +1
Query: 139 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 318
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 319 XXXXXXXIVENGAGTG-*TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 486
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 487 XXXXXXXXXXXSFDQLPLFV*AVGITAFL 573
SF +LPL + A ITA +
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAII 246
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 37.5 bits (83), Expect = 0.23
Identities = 40/183 (21%), Positives = 61/183 (33%), Gaps = 1/183 (0%)
Frame = +1
Query: 1 WRRHEAT-NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 177
WR T +HK IG Y +L P + + Y+++ T H
Sbjct: 40 WRGWLGTVDHKRIGLRYIVTAFVFLLLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHG 99
Query: 178 XXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA 357
N L PL+LG+ D+AFPR+ + +
Sbjct: 100 VTMIFLYALPVLSGFA-NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVP 158
Query: 358 GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 537
G Y PL+S G ++D+ + L GIS+ S D+LP
Sbjct: 159 DGGWFNYVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLP 218
Query: 538 LFV 546
+ V
Sbjct: 219 IIV 221
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 36.7 bits (81), Expect = 0.39
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +1
Query: 235 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 411
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 412 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 555
D A ++ L GI + LPLFV AV
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAV 218
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 35.9 bits (79), Expect = 0.69
Identities = 40/194 (20%), Positives = 64/194 (32%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 WRRHEATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNP-GSLIGDDQIYNTIVTAHA 177
+R A N++ IG LY +L P L+G D YN I T H
Sbjct: 31 FRLISAVNNQVIGILYVGAAFLFFILAGILGLIMRTQLAVPENDLVGQD-FYNQIFTVHG 89
Query: 178 XXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA 357
L+P +L A D+ FPR++ +
Sbjct: 90 TTMMFLFAVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAP 148
Query: 358 GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 537
G +YPPL+ G + D + + IS+ S ++P
Sbjct: 149 KGGWFMYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMP 208
Query: 538 LFV*AVGITAFLLL 579
+F A+ I A +++
Sbjct: 209 IFAWAMLIFAAMIM 222
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 35.9 bits (79), Expect = 0.69
Identities = 30/154 (19%), Positives = 52/154 (33%)
Frame = +1
Query: 1 WRRHEATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAX 180
WR A N+ ++G Y +L PG+ +N T H
Sbjct: 49 WRYWSAVNNSEVGVWYALTALAFMLCAGVLAVLMRVQLAVPGNDFLSADRFNQFFTMHGS 108
Query: 181 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG 360
L+P +LGA D+ FPR++ + + +
Sbjct: 109 AMMFLFAVPMFEAISII-LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPK 167
Query: 361 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 462
+G +YPPL++ G D+ + L ++S
Sbjct: 168 SGWFMYPPLATQ--DEGLGSDIWLLGLSFIEVAS 199
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 34.3 bits (75), Expect = 2.1
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 16 ATNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 156
+TNHKDIGTLY EL PG+ I G+ Q+YN
Sbjct: 11 STNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 21 KS*RYWNIIFYFWYLIRNNWNIFKTFNS 104
KS YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 33.1 bits (72), Expect = 4.9
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +1
Query: 115 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 294
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 295 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS 393
F + +G +G T Y LS+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSA 167
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 8.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 306 TPLPYIINFKKNCRKWCRN 362
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 32.3 bits (70), Expect = 8.5
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 229 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 405
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 406 RGRSVDLAIFSLHLAGISS 462
G +L +L L+G+SS
Sbjct: 139 YGLGTNLIQIALILSGLSS 157
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,765,498
Number of Sequences: 1657284
Number of extensions: 6607024
Number of successful extensions: 12259
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 11865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12153
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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